View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6237_low_11 (Length: 360)

Name: NF6237_low_11
Description: NF6237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6237_low_11
NF6237_low_11
[»] chr8 (2 HSPs)
chr8 (5-351)||(9060654-9060999)
chr8 (265-339)||(38738327-38738401)
[»] chr7 (1 HSPs)
chr7 (7-351)||(29374566-29374912)
[»] chr4 (7 HSPs)
chr4 (5-242)||(19477298-19477544)
chr4 (5-218)||(26108171-26108385)
chr4 (5-218)||(26054931-26055141)
chr4 (5-111)||(7397236-7397342)
chr4 (154-350)||(30972399-30972595)
chr4 (227-330)||(8813912-8814015)
chr4 (221-337)||(45637335-45637451)
[»] chr3 (3 HSPs)
chr3 (111-257)||(25845633-25845779)
chr3 (227-330)||(21408213-21408316)
chr3 (5-62)||(630056-630113)
[»] chr5 (2 HSPs)
chr5 (154-350)||(39839796-39839992)
chr5 (222-342)||(8487950-8488070)
[»] chr6 (1 HSPs)
chr6 (198-339)||(18673267-18673408)
[»] chr1 (4 HSPs)
chr1 (131-240)||(4889452-4889561)
chr1 (221-337)||(2653801-2653917)
chr1 (154-207)||(12688213-12688266)
chr1 (278-350)||(6723846-6723918)
[»] chr2 (1 HSPs)
chr2 (222-342)||(35590123-35590243)


Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 5 - 351
Target Start/End: Complemental strand, 9060999 - 9060654
Alignment:
Q  5 aatatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaaattatacaatatttacaaatgtaaccaaattgaaacggcgac 104  Q
    ||||||||| ||||||||||| || |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  9060999 aatatattaccaccacaaaag-tctttcctaccataagacatgccaggagaaacagagattatacaatatttacaaatgtcaccaaattgaaacggcgac 9060901  T
Q  105 agaaacaaaacagacaaaattaaccaatgtccaaaatagtgaagggtgaaagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaa 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9060900 agaaacaaagcagacaaaattaaccaatgtccaaaatagtgaagggtgacagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaa 9060801  T
Q  205 ccagaaataagaaagcgacttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccat 304  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  9060800 ccagaaataagaaagcgacttaattttatcaaccacctgcaaaattgagcaatgtttactattgaagagcctattgtttctctctttccatatctcccac 9060701  T
Q  305 attgctgcaaaccaaagaacctgtaaaatggattgacgcgcctttgc 351  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||    
T  9060700 attgttgcaaaccaaagaacctgtaaaatggattgactcgcctttgc 9060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 339
Target Start/End: Complemental strand, 38738401 - 38738327
Alignment:
Q  265 gttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaagaacctgtaaaatggattg 339  Q
    |||||| | |||||||||||| |||||||| || |||||||  | |||||||||||  |||||||||||||||||    
T  38738401 gttgaaaatcctattgtttctttctttccaaatttcccataccgatgcaaaccaaatgacctgtaaaatggattg 38738327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 7 - 351
Target Start/End: Original strand, 29374566 - 29374912
Alignment:
Q  7 tatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaaattatacaatatttacaaatgtaaccaaattgaaacg-gcgaca 105  Q
    ||||||| |||  ||||||||||||| || |||||||||||| ||||  ||||||  |||||||||| ||||||  || ||||||  ||||   ||||||    
T  29374566 tatattaccacatcaaaaggtccttcttaacataagacatgctaggaagaacagagtttatacaataattacaacggtcaccaaaccgaaaatagcgaca 29374665  T
Q  106 gaaacaaaacagacaa---aattaaccaatgtccaaaatagtgaagggtgaaagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttc 202  Q
     ||||||| || ||||   |||||||||||| ||||||||||||| ||||||||| |||| ||||||||||| |  ||||| || |||||||||||||||    
T  29374666 -aaacaaa-caaacaagacaattaaccaatgcccaaaatagtgaaaggtgaaagccaccagccatgatagttgagatgaagagaaggaaacttcgccttc 29374763  T
Q  203 aaccagaaataagaaagcgacttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctccc 302  Q
    ||||| | | |||| ||||| ||||||||||| |||||||||||||||||||| |||||||   |||||| |||||||||||| |||||||| |||||||    
T  29374764 aaccacataaaagacagcgatttaattttatccaccacctgtaaaattgagcattgtttaccagtgaagatcctattgtttctttctttccagatctccc 29374863  T
Q  303 atattgctgcaaaccaaagaacctgtaaaatggattgacgcgcctttgc 351  Q
    |   || ||||||||||||||||||||| ||||| ||||||| ||||||    
T  29374864 acgatgttgcaaaccaaagaacctgtaatatggaatgacgcgtctttgc 29374912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 19477544 - 19477298
Alignment:
Q  5 aatatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaaattatacaatatttacaaatgtaaccaaattgaaacggcgac 104  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||| |||||||||  |||||||||||| ||||| || |||||||||||||||||||    
T  19477544 aatatattaccacaacaaaaagtccttcctagcataagacatgccagaagaaacagagtttatacaatattaacaaaggtcaccaaattgaaacggcgac 19477445  T
Q  105 agaaaca---aaacagac-aaaattaaccaatgtccaaaatagtgaagggtg--aaagctaccatccatgatagttaacgtg---aagtgatggaaactt 195  Q
    |||||||   |||||||| ||||||| |||||| |||||| |||||||||||  ||||| |||| ||||||||||| | |||   |||||| ||||||||    
T  19477444 agaaacaaacaaacagacaaaaattatccaatgcccaaaacagtgaagggtgaaaaagccaccagccatgatagttgaggtgatcaagtgaaggaaactt 19477345  T
Q  196 cgccttcaaccagaaataagaaagcgacttaattttatcaaccacct 242  Q
    |||||||||||| ||| |||  |||||||||||||||| ||||||||    
T  19477344 cgccttcaaccacaaaaaaggtagcgacttaattttattaaccacct 19477298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 26108385 - 26108171
Alignment:
Q  5 aatatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaaattatacaatatttacaaatgtaaccaaattgaaacggcgac 104  Q
    ||||||||| ||||||||||  || ||||||||||||||||||||| ||||||||||  |||||||||||||| ||| || || ||| ||||||| | ||    
T  26108385 aatatattaccaccacaaaaactcattcctagcataagacatgccacgagaaacagagtttatacaatatttataaaggtcacaaaactgaaacgccaac 26108286  T
Q  105 agaaacaaa-acagacaaaattaaccaatgtccaaaatagtgaagggtgaaagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttca 203  Q
    ||||| ||| | | | |||||||||||||| ||||||||||||||||||||||| ||||  |||||||||| | ||||| ||||||||||||| ||||||    
T  26108285 agaaataaacagatataaaattaaccaatgcccaaaatagtgaagggtgaaagccaccagtcatgatagttgaggtgaaatgatggaaacttcaccttca 26108186  T
Q  204 accagaaataagaaa 218  Q
    |||||||| ||||||    
T  26108185 accagaaaaaagaaa 26108171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 26055141 - 26054931
Alignment:
Q  5 aatatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaaattatacaatatttacaaatgtaaccaaattgaaacggcgac 104  Q
    ||||||||| || ||||||| |||||||||| |||||||||||| ||    ||||||  |||||||||||||| ||| || || | | ||||||| | ||    
T  26055141 aatatattaccatcacaaaaagtccttcctaacataagacatgcaag----aacagagtttatacaatatttataaaggtcactacactgaaacgccaac 26055046  T
Q  105 agaaacaaa-acagacaaaattaaccaatgtccaaaatagtgaagggtgaaagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttca 203  Q
    ||||||||| | | | |||||||||||||||||||||||||||||||||||||| ||||  |||||||||| | ||||| ||||||||||||| ||||||    
T  26055045 agaaacaaacaaacataaaattaaccaatgtccaaaatagtgaagggtgaaagccaccagtcatgatagttgaggtgaaatgatggaaacttcaccttca 26054946  T
Q  204 accagaaataagaaa 218  Q
    |||||||| ||||||    
T  26054945 accagaaaaaagaaa 26054931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 7397342 - 7397236
Alignment:
Q  5 aatatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaaattatacaatatttacaaatgtaaccaaattgaaacggcgac 104  Q
    ||||||||| ||| |||||| |||||||||| ||||||| ||| |||  ||||||||  |||||||||||| ||||| || |||||| ||||||||||||    
T  7397342 aatatattaccacgacaaaaagtccttcctaacataagatatgtcagaggaaacagagtttatacaatattaacaaaggtcaccaaactgaaacggcgac 7397243  T
Q  105 agaaaca 111  Q
    |||||||    
T  7397242 agaaaca 7397236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 350
Target Start/End: Original strand, 30972399 - 30972595
Alignment:
Q  154 aagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaaccagaaataagaaagcgacttaattttatcaaccacctgtaaaattgag 253  Q
    |||| |||| ||||||||||| | | |||| || ||||| |||||||||| ||| |   |||  |||||||||||||||||||||||||| | |||||||    
T  30972399 aagccaccagccatgatagttgaagggaagagaaggaaatttcgccttcagccacatgaaagtcagcgacttaattttatcaaccacctgcataattgag 30972498  T
Q  254 caatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaagaacctgtaaaatggattgacgcgcctttg 350  Q
    || | ||| |  || |||||| | || ||||| |||||||| || | |||  | | |||| ||||||||||||||||||| ||| | || |||||||    
T  30972499 cactctttgccattaaagagcatgttatttctttctttccaaattttccacgtagttgcataccaaagaacctgtaaaattgatcgtcgtgcctttg 30972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 330
Target Start/End: Complemental strand, 8814015 - 8813912
Alignment:
Q  227 attttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaagaacct 326  Q
    ||||| || |||||||| | ||| ||||||| |||   |||||||| |||||||||||| |||||||| || ||||| | || ||||||||||| |||||    
T  8814015 attttgtccaccacctgcacaatagagcaatttttgtcgttgaagatcctattgtttctttctttccaaatttcccagactgttgcaaaccaaataacct 8813916  T
Q  327 gtaa 330  Q
    ||||    
T  8813915 gtaa 8813912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 337
Target Start/End: Complemental strand, 45637451 - 45637335
Alignment:
Q  221 gacttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaa 320  Q
    |||||||||||||| ||||||||   ||| || |||| |||   |||||| | |||||||||||| |||||||| || ||||| |  | |||||||||||    
T  45637451 gacttaattttatccaccacctgcggaatagaacaatttttgtcgttgaaaatcctattgtttctttctttccaaatttcccacaccgttgcaaaccaaa 45637352  T
Q  321 gaacctgtaaaatggat 337  Q
      |||||||||||||||    
T  45637351 tgacctgtaaaatggat 45637335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 257
Target Start/End: Complemental strand, 25845779 - 25845633
Alignment:
Q  111 aaaacagacaaaattaaccaatgtccaaaatagtgaagggtgaaagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaaccagaa 210  Q
    |||||||| | |||||| ||||| ||||||| ||| | ||   |||| |||| ||||| ||||| | | | || || |||||||||||||||||||| |     
T  25845779 aaaacagaaacaattaatcaatgcccaaaatggtgtatggactaagccaccaaccatggtagttcaagggcagagaaggaaacttcgccttcaaccacat 25845680  T
Q  211 ataagaaagcgacttaattttatcaaccacctgtaaaattgagcaat 257  Q
      |||| |||||||||||||||||||||||||| | |||||| ||||    
T  25845679 gaaagagagcgacttaattttatcaaccacctgaacaattgaacaat 25845633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 330
Target Start/End: Original strand, 21408213 - 21408316
Alignment:
Q  227 attttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaagaacct 326  Q
    ||||| || |||||||| | ||| ||||||| |||   |||||||| |||||||||||| |||||||| || ||||| | || ||||||| ||| |||||    
T  21408213 attttgtccaccacctgcacaatagagcaatttttgtcgttgaagatcctattgtttctttctttccaaatttcccagactgttgcaaacaaaataacct 21408312  T
Q  327 gtaa 330  Q
    ||||    
T  21408313 gtaa 21408316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 630113 - 630056
Alignment:
Q  5 aatatattaacaccacaaaaggtccttcctagcataagacatgccaggagaaacagaa 62  Q
    ||||||||| ||||| |||| ||| || ||||||||||||||||  ||||||||||||    
T  630113 aatatattaccaccataaaaagtcttttctagcataagacatgcagggagaaacagaa 630056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 154 - 350
Target Start/End: Complemental strand, 39839992 - 39839796
Alignment:
Q  154 aagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaaccagaaataagaaagcgacttaattttatcaaccacctgtaaaattgag 253  Q
    |||| |||| ||||||||||||| | |||| ||||||||||||| ||||||||| |   | ||   ||||||||||||||||||||||||||  || | |    
T  39839992 aagccaccaaccatgatagttaaagggaagagatggaaacttcgtcttcaaccacatgaacgacgtcgacttaattttatcaaccacctgtaggataggg 39839893  T
Q  254 caatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaagaacctgtaaaatggattgacgcgcctttg 350  Q
    || | |||    ||||| | |||||| ||| | ||||| ||||| |||||  | |  ||| ||||||||||||||||||| ||| |||| |||||||    
T  39839892 cactctttgtcattgaacaacctattatttttttcttttcatatttcccacgtagtagcataccaaagaacctgtaaaattgatcgacgagcctttg 39839796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 8488070 - 8487950
Alignment:
Q  222 acttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaag 321  Q
    |||| ||||| || |||||||| ||||| ||||||  |||  ||||||| | || ||| ||||| ||||||||||| ||||| | || |||||||||||     
T  8488070 acttgattttgtccaccacctgcaaaatagagcaaattttgttgttgaaaatccgattatttctttctttccatatttcccacactgttgcaaaccaaat 8487971  T
Q  322 aacctgtaaaatggattgacg 342  Q
    ||||||||  || ||||||||    
T  8487970 aacctgtatgattgattgacg 8487950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 339
Target Start/End: Complemental strand, 18673408 - 18673267
Alignment:
Q  198 ccttcaaccagaaataagaaagcgacttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatat 297  Q
    |||||||||| | | ||| ||| |||||||||||||| ||||||||   ||| || |||| |||   |||||| | |||||||||||| | |||||| ||    
T  18673408 ccttcaaccacataaaagtaagagacttaattttatccaccacctgcggaatagaacaatttttgtcgttgaaaatcctattgtttctttttttccaaat 18673309  T
Q  298 ctcccatattgctgcaaaccaaagaacctgtaaaatggattg 339  Q
     || |||| || |||||||||||  || ||||||||||||||    
T  18673308 ttctcatactgatgcaaaccaaatgacttgtaaaatggattg 18673267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 240
Target Start/End: Complemental strand, 4889561 - 4889452
Alignment:
Q  131 atgtccaaaatagtgaagggtgaaagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaaccagaaataagaaagcgacttaattt 230  Q
    ||||||||||||||||| ||   |||  |||| ||||||||||||| | |||| || || ||||||||||| ||||| |   | | ||||||||||||||    
T  4889561 atgtccaaaatagtgaatggactaagtcaccacccatgatagttaaagggaagagaagggaacttcgccttgaaccacatgaatgcaagcgacttaattt 4889462  T
Q  231 tatcaaccac 240  Q
    ||||||||||    
T  4889461 tatcaaccac 4889452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 337
Target Start/End: Original strand, 2653801 - 2653917
Alignment:
Q  221 gacttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaa 320  Q
    |||||||||||||| ||||||||   ||| || |||| |||   |||||| | |||||||||||| |||||||| || ||||| |  | |||||||||||    
T  2653801 gacttaattttatccaccacctgcggaatagaacaatttttgtcgttgaaaatcctattgtttctttctttccaaatttcccacaccgttgcaaaccaaa 2653900  T
Q  321 gaacctgtaaaatggat 337  Q
      |||||||||||||||    
T  2653901 tgacctgtaaaatggat 2653917  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 12688266 - 12688213
Alignment:
Q  154 aagctaccatccatgatagttaacgtgaagtgatggaaacttcgccttcaacca 207  Q
    |||| |||||||||||||||||| | |||| | |||||||||| ||||||||||    
T  12688266 aagccaccatccatgatagttaaagggaagagttggaaacttcaccttcaacca 12688213  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 350
Target Start/End: Original strand, 6723846 - 6723918
Alignment:
Q  278 ttgtttctctctttccatatctcccatattgctgcaaaccaaagaacctgtaaaatggattgacgcgcctttg 350  Q
    |||||||| ||||||||||| |||||||| |  ||||| || | ||||||||| |||||||||| | ||||||    
T  6723846 ttgtttctttctttccatatttcccatatagtcgcaaatcatataacctgtaagatggattgacacacctttg 6723918  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 342
Target Start/End: Complemental strand, 35590243 - 35590123
Alignment:
Q  222 acttaattttatcaaccacctgtaaaattgagcaatgtttactgttgaagagcctattgtttctctctttccatatctcccatattgctgcaaaccaaag 321  Q
    |||||||||||||||||||||| | ||||||||| | ||| |  ||||| | ||| || ||||| |||||||| || |||||  | | |||| |||||||    
T  35590243 acttaattttatcaaccacctgaataattgagcattctttgccattgaaaaacctgttatttctttctttccagatttcccacgtagttgcataccaaag 35590144  T
Q  322 aacctgtaaaatggattgacg 342  Q
    ||| |||||||| ||| ||||    
T  35590143 aacatgtaaaatagatcgacg 35590123  T

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