View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6237_low_15 (Length: 288)
Name: NF6237_low_15
Description: NF6237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6237_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 25241751 - 25242023
Alignment:
| Q |
1 |
tatttctctcctccatttttcttgtatgccatcattgggcaagttacttgcttgcattgtagtaccttgatttttaaacaatcataattatcataataaa |
100 |
Q |
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| T |
25241751 |
tatttctctcctccatttttcttgtatgccatcattgggcaagttacttgcttgcattgtggtaccttgatttttaaacaatcataattatcataataaa |
25241850 |
T |
|
| Q |
101 |
tatcataaaaataatgttagaatgacactatacatcatctgtgactgtggttctttacattcaaaaagaaatacctaaatagtgttataaaatattcaaa |
200 |
Q |
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||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
25241851 |
tatcataaaaataatgttagaatgacattatacattatctgtgactgtggttctttacattcaaagagaaatacctaaatagtgttataaaatattcaaa |
25241950 |
T |
|
| Q |
201 |
actgcatcatattcatttaacttaatttaaaattttaaacatattaacccacttgggttaatctggtggtaat |
273 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
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| T |
25241951 |
actgcatcatattcatctaacttaatttaaaattttaaacatattaatccacttgggttgatctggtggtaat |
25242023 |
T |
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