View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6239_low_16 (Length: 245)
Name: NF6239_low_16
Description: NF6239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6239_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 38946873 - 38947025
Alignment:
| Q |
12 |
catcatcaaccgccttcgttcatctaattgatttatatacttatcctatcgtgtatactttttcactcaatctaaggatacataacatttatttacatga |
111 |
Q |
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| T |
38946873 |
catcatcaaccgccttcgttcatctaattgatttatatacttatcctatcgtgtatactttttcactcaatctgaggatacataacatttatttacatga |
38946972 |
T |
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| Q |
112 |
aaatgtgtaatttcgattttattatgtccttcaatgcaaattgtacgttgatt |
164 |
Q |
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| T |
38946973 |
aaatgtgtaatttcgattttattatgtccttcaatgcaaattgtacgttgatt |
38947025 |
T |
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