View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6240_low_15 (Length: 319)
Name: NF6240_low_15
Description: NF6240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6240_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 11 - 304
Target Start/End: Original strand, 41811832 - 41812126
Alignment:
| Q |
11 |
cagagacaacaaatgacattttcagaatatctaacttcaattgtgaggaaaatcatgatttctctacattttcaatttttcaagcactaagttccatcag |
110 |
Q |
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| T |
41811832 |
cagaaacaacaaatgacattttcagaatatctaacttcaattgtgaggaaaatcatgatttctctacattttcaatttttcaagcactaagttccatcag |
41811931 |
T |
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| Q |
111 |
taaatctcacaaggatagaaacaaa-cagaactagtatttggaggaagtgatgagaaatcataccaatgatgaggtaaaattacagtgctaaactttgat |
209 |
Q |
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| T |
41811932 |
taaatctcacaaggatagaaacaaagcagagctagtatttggaggaagtgatgagaaatcataccaatgatgaggtaaaattacagtgctaaactttgat |
41812031 |
T |
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| Q |
210 |
tcacattgtgagaagcatacccattgattgcttcagttgttgagtgcgtgtacttgttacttatgtcccacatggcttagatattatgcatattc |
304 |
Q |
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| T |
41812032 |
tcacattgtgagaagcatacccattgattgcttcagttgttgagtgcgtgtacttgttacttatgtcccacatggcttagatattatgcatattc |
41812126 |
T |
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