View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6240_low_27 (Length: 236)
Name: NF6240_low_27
Description: NF6240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6240_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 51530174 - 51530393
Alignment:
| Q |
5 |
cccttatttttatctaatcagttgataaaagagatcgtattagagatgttgttataatgatgcaggttttagctcaaccaatatttcgtatagttgaaat |
104 |
Q |
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| T |
51530174 |
cccttatttttatctaatcagttgataaaatagatcgtattagagatgttgttataatgatgcaggttttagctcaaccaatatttcgtatagttgaaat |
51530273 |
T |
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| Q |
105 |
gggtgctaacatgatgtggccacaatcatctttcatacataaggaatacccaaacaaaattggttctttaacattcaacatcaacttatttagactaatt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51530274 |
gggtgctaacatgatgtggccacaatcatctttcatacataaggaatacccaaacaaaattggttctttaacattcaacatcaacttatttagactaatt |
51530373 |
T |
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| Q |
205 |
tggaggacaatatttgtgat |
224 |
Q |
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|||||||||||||||||||| |
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| T |
51530374 |
tggaggacaatatttgtgat |
51530393 |
T |
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