View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6245_low_5 (Length: 262)
Name: NF6245_low_5
Description: NF6245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6245_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 3576261 - 3576493
Alignment:
| Q |
19 |
gctttgctatcaaatgatgaatccaaaaaatcagaaactggtggccaggaacatgtgacttcaatctccaactcaaattgtcagattgacacgtggaaat |
118 |
Q |
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| T |
3576261 |
gctttgctatcaaatgatgaatccaaaaaatcagaaactggtggccaggaacatgtgacttcaatctccaactcaaattgtcagattgacacgtggaaat |
3576360 |
T |
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| Q |
119 |
gaaaatttgtaactatatatgaagatgcatattaatattatatattatagggagtagtacagtttaactcctacaaaaattaaaagggtttatgtacata |
218 |
Q |
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| T |
3576361 |
gaaaatttgtaactatatatgaagatgcatattaatattatatattatagggagtagtacagtttaactcctacaaaaattaaaagggtttatgtacata |
3576460 |
T |
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| Q |
219 |
gtaaacccttataaagcattgttaaatattctt |
251 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
3576461 |
gtaaacccttataaagcattgttaaatattctt |
3576493 |
T |
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