View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6249_low_4 (Length: 351)
Name: NF6249_low_4
Description: NF6249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6249_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 22 - 339
Target Start/End: Complemental strand, 45607803 - 45607475
Alignment:
| Q |
22 |
caatataaatacaaggaacacaatatgtatccatgatctttgcacataactgaaatatatgtaacgaaatggctaactaaaaattagaaacaatgccttt |
121 |
Q |
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| T |
45607803 |
caatataaatacaaggaacacaatatgtatccatgatctttgcacataactgaaatatatgtaacgaaatggctaactaaaaattagaaacaatgccttt |
45607704 |
T |
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| Q |
122 |
gataatattcatgagcagtgcattaaataataacaattgggtctgtaaacat-----------tgggtggcgtaacaatataacggtgtgcttgttcaaa |
210 |
Q |
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| T |
45607703 |
gataatattcatgagcagtgcattaaataataacaattgggtctgtaaacatggtacgcaacgtgggtggcgtaacaatataacggtgtgcttgttcaaa |
45607604 |
T |
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| Q |
211 |
aagttagataatcaaatttgagcttagttatcttaatttaaccaattaaaatagaggtgtatttggatttggtacaaccaactttctacattaactgcaa |
310 |
Q |
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| T |
45607603 |
aagttagataatcaaatttgagcttagttatcttaatttaaccaattaaaatggaggtgtatttggatttggtacaaccaactttctacattaactgcaa |
45607504 |
T |
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| Q |
311 |
tttcaagcattcctacccgcctctctgct |
339 |
Q |
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|||||||||||||||| |||||||||||| |
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| T |
45607503 |
tttcaagcattcctacgcgcctctctgct |
45607475 |
T |
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