View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6254_low_11 (Length: 313)
Name: NF6254_low_11
Description: NF6254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6254_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 15 - 296
Target Start/End: Complemental strand, 46913796 - 46913515
Alignment:
| Q |
15 |
gagaagaagaggaggagaatgataaagaggaggaggaagataaaatatcaacaagaaggtgagtgaaagcttgaacaatatacttgtgagtatgtgtagg |
114 |
Q |
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| T |
46913796 |
gagatgaagaggaggagaatgataaagaggaggaggaagataaaatatcaacaagaaggtgagtgaaagcttgaacaatatacttgtgagtatgtgtagg |
46913697 |
T |
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| Q |
115 |
attaagagcaagatagcataagagaagttcatgaagataatcccaatcattagtaacatcaaccacttgttgttgagattgaatcatttcctgcatagaa |
214 |
Q |
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| T |
46913696 |
attaagagcaagatagcataagagaagttcatgaagataatcccaatcgttagtaacatccaccacttgttgttgagattgaatcatttcctgcatagaa |
46913597 |
T |
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| Q |
215 |
cggaggaaatcaacgtaagggtttacagaatattttggcaccctcttcacactacctcctcttggtatcaacgagttattac |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46913596 |
cggaggaaatcaacgtaagggtttacagaatattttggcaccctcttcacactacctcctcttggtatcaacgagttattac |
46913515 |
T |
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