View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6254_low_13 (Length: 298)
Name: NF6254_low_13
Description: NF6254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6254_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 10323785 - 10323507
Alignment:
| Q |
1 |
ataaggataattgagttatagaacttactgcaaaattaaaaacaattatacttgatgctttatggggattatcatgatcacccatagaaagtgaaacttc |
100 |
Q |
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| T |
10323785 |
ataagaataattgaattataggatttactgcaaaattaaaaacaattatacttgatgctttatggggattataatgatcacccatagaaagtgaaacttc |
10323686 |
T |
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| Q |
101 |
aagtttaactaaatccttaaccatttgtggatgtatatcatcattgacccagccatttgaactacatatacaaacaatatttcgaaaatcaacttaggat |
200 |
Q |
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| T |
10323685 |
aagtttaactaaatccttaaccatttgtgcatgtatatcatcattgaccccgccatttgaactacatatacaaacaatatttcgaaaatcaacttaggat |
10323586 |
T |
|
| Q |
201 |
cttctttgagttagtaaattaatgataatgttaaatatttggagcacctttcaattaaagtaacaaaggacaaactacc |
279 |
Q |
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| T |
10323585 |
cttctttgagttagtaaattaatgataatgttaaatatttggagcacctttcaattaaagtaacaaaggacaaactacc |
10323507 |
T |
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