View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6254_low_8 (Length: 372)

Name: NF6254_low_8
Description: NF6254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6254_low_8
NF6254_low_8
[»] chr2 (39 HSPs)
chr2 (26-276)||(30563730-30563981)
chr2 (277-361)||(7664642-7664727)
chr2 (279-361)||(6325316-6325399)
chr2 (280-361)||(8851151-8851233)
chr2 (276-361)||(8851551-8851637)
chr2 (280-361)||(26692789-26692871)
chr2 (276-357)||(37720203-37720285)
chr2 (278-359)||(18750097-18750178)
chr2 (275-361)||(7664246-7664333)
chr2 (274-361)||(7979564-7979650)
chr2 (278-361)||(16911238-16911321)
chr2 (277-361)||(16910827-16910912)
chr2 (277-361)||(17850978-17851062)
chr2 (274-361)||(5378658-5378746)
chr2 (276-361)||(17851371-17851457)
chr2 (276-361)||(7979972-7980057)
chr2 (280-361)||(19141818-19141898)
chr2 (280-361)||(41790494-41790575)
chr2 (274-361)||(41790881-41790969)
chr2 (275-361)||(5379928-5380015)
chr2 (279-361)||(19141446-19141528)
chr2 (280-361)||(5793450-5793532)
chr2 (284-361)||(6324924-6325002)
chr2 (280-361)||(26692399-26692481)
chr2 (280-361)||(18749729-18749810)
chr2 (277-354)||(38490817-38490894)
chr2 (274-354)||(26841584-26841665)
chr2 (275-354)||(2639458-2639538)
chr2 (276-354)||(2638819-2638898)
chr2 (277-354)||(26842214-26842292)
chr2 (278-354)||(18296077-18296154)
chr2 (280-354)||(7591204-7591279)
chr2 (275-328)||(30190921-30190975)
chr2 (276-328)||(18296695-18296748)
chr2 (276-328)||(20347466-20347519)
chr2 (277-326)||(43495609-43495658)
chr2 (277-329)||(6171156-6171208)
chr2 (276-328)||(26737481-26737532)
chr2 (280-328)||(32673145-32673193)
[»] chr5 (40 HSPs)
chr5 (274-361)||(43464161-43464248)
chr5 (266-361)||(26571133-26571230)
chr5 (276-361)||(37780319-37780404)
chr5 (274-361)||(12498564-12498652)
chr5 (278-361)||(22729409-22729492)
chr5 (273-361)||(12498897-12498986)
chr5 (276-357)||(37610201-37610282)
chr5 (280-361)||(43463759-43463840)
chr5 (275-361)||(10098910-10098996)
chr5 (280-361)||(21207229-21207311)
chr5 (276-361)||(34147479-34147565)
chr5 (277-357)||(22729008-22729088)
chr5 (277-361)||(37610587-37610671)
chr5 (277-361)||(19514525-19514611)
chr5 (274-361)||(41072183-41072270)
chr5 (280-361)||(2817152-2817234)
chr5 (272-361)||(26570724-26570814)
chr5 (280-361)||(30401885-30401967)
chr5 (277-361)||(3888239-3888324)
chr5 (277-359)||(10098519-10098602)
chr5 (280-361)||(3888631-3888713)
chr5 (276-361)||(19514932-19515018)
chr5 (276-361)||(34147140-34147224)
chr5 (277-357)||(37780715-37780796)
chr5 (278-361)||(25940983-25941067)
chr5 (279-361)||(2817544-2817626)
chr5 (280-361)||(11316717-11316799)
chr5 (276-361)||(25940520-25940606)
chr5 (275-352)||(11351405-11351483)
chr5 (277-354)||(18817587-18817665)
chr5 (275-353)||(31569905-31569983)
chr5 (304-361)||(11316943-11317000)
chr5 (274-354)||(18816949-18817030)
chr5 (276-361)||(42919304-42919389)
chr5 (274-328)||(22428931-22428985)
chr5 (274-328)||(22429198-22429252)
chr5 (274-326)||(16466746-16466799)
chr5 (276-328)||(26020449-26020502)
chr5 (280-328)||(9665560-9665607)
chr5 (276-328)||(41383169-41383221)
[»] chr1 (59 HSPs)
chr1 (275-361)||(9347520-9347606)
chr1 (276-361)||(46824247-46824333)
chr1 (274-361)||(6703457-6703545)
chr1 (278-361)||(13918836-13918920)
chr1 (277-361)||(27172116-27172200)
chr1 (277-361)||(13918446-13918531)
chr1 (276-361)||(20480167-20480252)
chr1 (265-361)||(999494-999590)
chr1 (277-361)||(49317752-49317836)
chr1 (277-361)||(9347126-9347211)
chr1 (277-361)||(26814694-26814779)
chr1 (277-361)||(48105085-48105170)
chr1 (277-361)||(50615590-50615674)
chr1 (277-361)||(50623418-50623502)
chr1 (277-355)||(6703869-6703948)
chr1 (276-359)||(20371039-20371121)
chr1 (275-361)||(28633718-28633805)
chr1 (275-357)||(32163016-32163099)
chr1 (279-361)||(50526441-50526524)
chr1 (276-361)||(4692402-4692488)
chr1 (280-361)||(42611188-42611270)
chr1 (280-361)||(50430050-50430132)
chr1 (280-361)||(999115-999196)
chr1 (277-361)||(20371321-20371406)
chr1 (262-351)||(20480591-20480680)
chr1 (277-361)||(21687025-21687110)
chr1 (272-361)||(49318135-49318224)
chr1 (275-361)||(26815088-26815175)
chr1 (275-361)||(28634126-28634213)
chr1 (280-361)||(42611583-42611665)
chr1 (280-361)||(46823846-46823928)
chr1 (280-361)||(48104681-48104763)
chr1 (277-361)||(47498301-47498384)
chr1 (277-352)||(21687445-21687520)
chr1 (276-361)||(50429655-50429741)
chr1 (274-361)||(44911022-44911110)
chr1 (282-344)||(32162734-32162797)
chr1 (274-361)||(19008719-19008807)
chr1 (277-361)||(49318412-49318496)
chr1 (290-361)||(44911406-44911477)
chr1 (275-361)||(50949534-50949621)
chr1 (276-357)||(27172514-27172596)
chr1 (280-352)||(50949164-50949237)
chr1 (276-354)||(49284408-49284487)
chr1 (276-338)||(19007734-19007796)
chr1 (280-361)||(44224088-44224169)
chr1 (276-361)||(39691969-39692055)
chr1 (278-328)||(47498497-47498547)
chr1 (277-361)||(4692022-4692106)
chr1 (279-328)||(17518604-17518653)
chr1 (276-328)||(13589661-13589713)
chr1 (277-354)||(6002237-6002315)
chr1 (276-325)||(50615239-50615289)
chr1 (276-325)||(50623067-50623117)
chr1 (277-326)||(1176717-1176766)
chr1 (276-328)||(8108995-8109048)
chr1 (276-328)||(47955305-47955358)
chr1 (279-354)||(6002870-6002946)
chr1 (277-328)||(48190771-48190823)
[»] chr4 (41 HSPs)
chr4 (276-361)||(48405961-48406046)
chr4 (273-360)||(292778-292866)
chr4 (276-361)||(28196742-28196828)
chr4 (277-361)||(4239335-4239420)
chr4 (273-361)||(28196342-28196431)
chr4 (277-361)||(32703619-32703704)
chr4 (274-361)||(9023241-9023329)
chr4 (265-361)||(23539829-23539924)
chr4 (278-361)||(25161879-25161963)
chr4 (274-361)||(39744434-39744522)
chr4 (275-361)||(9380710-9380797)
chr4 (274-361)||(44468892-44468978)
chr4 (277-361)||(9380307-9380392)
chr4 (276-361)||(26207360-26207445)
chr4 (277-361)||(39086592-39086677)
chr4 (276-361)||(169012-169099)
chr4 (276-357)||(293190-293272)
chr4 (276-361)||(9023649-9023735)
chr4 (277-361)||(169408-169493)
chr4 (280-361)||(12757770-12757851)
chr4 (273-361)||(39744026-39744115)
chr4 (278-361)||(43292038-43292122)
chr4 (276-361)||(26207715-26207801)
chr4 (276-361)||(32703224-32703310)
chr4 (277-361)||(23540221-23540306)
chr4 (277-361)||(43292326-43292411)
chr4 (280-361)||(48406354-48406435)
chr4 (267-361)||(39912456-39912550)
chr4 (274-361)||(12758173-12758260)
chr4 (275-354)||(50678777-50678857)
chr4 (291-361)||(25162282-25162352)
chr4 (276-361)||(36095816-36095902)
chr4 (276-357)||(39912053-39912134)
chr4 (280-354)||(36096451-36096526)
chr4 (277-354)||(50679400-50679478)
chr4 (275-340)||(56505691-56505757)
chr4 (275-328)||(3930482-3930535)
chr4 (273-328)||(11241663-11241718)
chr4 (276-354)||(43051228-43051307)
chr4 (275-328)||(22681881-22681935)
chr4 (276-328)||(24775785-24775838)
[»] chr8 (33 HSPs)
chr8 (277-361)||(16169174-16169258)
chr8 (276-361)||(41662520-41662606)
chr8 (273-361)||(6199065-6199154)
chr8 (273-361)||(37396704-37396793)
chr8 (272-361)||(9623497-9623587)
chr8 (276-361)||(17431286-17431372)
chr8 (276-361)||(24473737-24473823)
chr8 (277-361)||(16169576-16169661)
chr8 (280-361)||(25439095-25439176)
chr8 (277-361)||(37397114-37397199)
chr8 (276-361)||(20861607-20861693)
chr8 (280-361)||(34498125-34498207)
chr8 (277-361)||(24473343-24473428)
chr8 (274-361)||(34498524-34498612)
chr8 (276-354)||(13936722-13936800)
chr8 (299-361)||(33727074-33727136)
chr8 (274-354)||(13026632-13026713)
chr8 (274-361)||(2856523-2856611)
chr8 (274-361)||(6198655-6198743)
chr8 (274-361)||(15444616-15444704)
chr8 (279-340)||(25438794-25438856)
chr8 (276-354)||(9823337-9823416)
chr8 (279-361)||(15444213-15444296)
chr8 (277-344)||(9623866-9623935)
chr8 (277-354)||(39724024-39724102)
chr8 (276-323)||(9465606-9465653)
chr8 (280-354)||(13027257-13027332)
chr8 (272-330)||(43162229-43162287)
chr8 (276-330)||(12281123-12281178)
chr8 (277-354)||(9822748-9822826)
chr8 (277-354)||(22851390-22851468)
chr8 (275-354)||(13937365-13937445)
chr8 (277-328)||(41662405-41662457)
[»] chr3 (39 HSPs)
chr3 (277-361)||(42672978-42673062)
chr3 (277-361)||(44008370-44008454)
chr3 (275-361)||(3353520-3353606)
chr3 (276-361)||(40848520-40848605)
chr3 (277-361)||(42673265-42673349)
chr3 (275-361)||(48159895-48159982)
chr3 (279-361)||(22429565-22429647)
chr3 (268-361)||(27238456-27238550)
chr3 (277-361)||(10348768-10348853)
chr3 (277-361)||(24485429-24485513)
chr3 (275-361)||(40848930-40849017)
chr3 (280-361)||(53766166-53766248)
chr3 (280-361)||(24485025-24485106)
chr3 (277-361)||(47666304-47666389)
chr3 (277-361)||(48160302-48160387)
chr3 (272-351)||(3353123-3353202)
chr3 (280-361)||(27238869-27238951)
chr3 (276-361)||(53687887-53687973)
chr3 (276-361)||(26007181-26007266)
chr3 (277-361)||(44007967-44008052)
chr3 (274-361)||(26007588-26007676)
chr3 (277-361)||(53688272-53688356)
chr3 (271-361)||(36180959-36181050)
chr3 (276-361)||(36180555-36180639)
chr3 (277-361)||(42456164-42456247)
chr3 (278-361)||(22429159-22429243)
chr3 (276-340)||(53766569-53766634)
chr3 (278-361)||(10348480-10348564)
chr3 (274-361)||(47665908-47665996)
chr3 (277-354)||(21896487-21896564)
chr3 (273-339)||(42455786-42455853)
chr3 (274-328)||(8315084-8315138)
chr3 (273-361)||(1928403-1928491)
chr3 (277-361)||(8314013-8314098)
chr3 (276-328)||(47871124-47871176)
chr3 (274-328)||(14015966-14016020)
chr3 (275-328)||(9026734-9026787)
chr3 (277-328)||(20969021-20969073)
chr3 (280-328)||(26540694-26540742)
[»] chr7 (41 HSPs)
chr7 (275-361)||(18864371-18864457)
chr7 (276-361)||(13744202-13744287)
chr7 (266-361)||(37971949-37972045)
chr7 (275-361)||(10533032-10533119)
chr7 (275-361)||(37889228-37889315)
chr7 (276-361)||(37972365-37972451)
chr7 (277-361)||(9035262-9035347)
chr7 (277-361)||(37888833-37888918)
chr7 (274-361)||(20418885-20418973)
chr7 (277-361)||(48359320-48359404)
chr7 (276-361)||(20419293-20419379)
chr7 (276-361)||(22740155-22740241)
chr7 (280-361)||(22740560-22740641)
chr7 (277-361)||(3204669-3204752)
chr7 (275-361)||(42418997-42419084)
chr7 (276-361)||(3205062-3205148)
chr7 (276-361)||(17156966-17157052)
chr7 (280-361)||(18863970-18864052)
chr7 (276-361)||(38826882-38826968)
chr7 (275-361)||(48359627-48359713)
chr7 (277-361)||(13741557-13741642)
chr7 (276-361)||(29292921-29293007)
chr7 (274-361)||(9034864-9034953)
chr7 (277-361)||(36527767-36527852)
chr7 (277-361)||(29293315-29293400)
chr7 (280-357)||(36527387-36527464)
chr7 (276-361)||(42418590-42418676)
chr7 (266-354)||(44599478-44599567)
chr7 (276-354)||(44600111-44600190)
chr7 (274-354)||(13863310-13863391)
chr7 (276-340)||(16198967-16199032)
chr7 (276-354)||(13863933-13864011)
chr7 (274-354)||(8643742-8643823)
chr7 (274-353)||(46816288-46816368)
chr7 (274-328)||(9412327-9412382)
chr7 (277-328)||(23686421-23686472)
chr7 (278-328)||(8953891-8953941)
chr7 (278-328)||(18925324-18925373)
chr7 (277-329)||(18925062-18925115)
chr7 (277-328)||(3687658-3687710)
chr7 (273-328)||(13772637-13772693)
[»] scaffold0017 (2 HSPs)
scaffold0017 (277-361)||(185243-185328)
scaffold0017 (278-361)||(184840-184924)
[»] scaffold0176 (2 HSPs)
scaffold0176 (276-361)||(19620-19705)
scaffold0176 (262-361)||(20012-20111)
[»] scaffold0069 (2 HSPs)
scaffold0069 (276-359)||(50074-50156)
scaffold0069 (277-361)||(50475-50560)
[»] scaffold0041 (2 HSPs)
scaffold0041 (276-361)||(38664-38750)
scaffold0041 (309-361)||(38284-38336)
[»] chr6 (26 HSPs)
chr6 (280-361)||(32733965-32734047)
chr6 (277-361)||(10087827-10087912)
chr6 (277-361)||(33974268-33974353)
chr6 (277-361)||(22684327-22684411)
chr6 (277-361)||(22754657-22754741)
chr6 (276-361)||(29074341-29074426)
chr6 (276-361)||(29079105-29079190)
chr6 (276-361)||(29106914-29106999)
chr6 (276-361)||(7654517-7654603)
chr6 (276-357)||(13177029-13177110)
chr6 (278-361)||(22755058-22755142)
chr6 (279-339)||(403651-403711)
chr6 (275-354)||(33829612-33829692)
chr6 (276-361)||(2354779-2354865)
chr6 (277-354)||(33828990-33829068)
chr6 (277-361)||(2354409-2354493)
chr6 (274-328)||(13579653-13579707)
chr6 (275-328)||(10039674-10039727)
chr6 (280-328)||(3825530-3825578)
chr6 (298-361)||(32733579-32733642)
chr6 (294-361)||(33973882-33973949)
chr6 (277-328)||(11656784-11656836)
chr6 (297-361)||(13176640-13176704)
chr6 (276-328)||(21031978-21032030)
chr6 (270-326)||(30388055-30388111)
chr6 (276-328)||(33655117-33655169)
[»] scaffold0460 (2 HSPs)
scaffold0460 (277-357)||(736-816)
scaffold0460 (276-361)||(329-415)
[»] scaffold0029 (2 HSPs)
scaffold0029 (276-361)||(9904-9991)
scaffold0029 (268-338)||(10311-10380)
[»] scaffold0110 (1 HSPs)
scaffold0110 (272-328)||(45809-45865)
[»] scaffold0015 (1 HSPs)
scaffold0015 (277-328)||(17158-17209)
[»] scaffold0328 (1 HSPs)
scaffold0328 (277-354)||(6771-6849)
[»] scaffold0319 (2 HSPs)
scaffold0319 (277-328)||(6699-6750)
scaffold0319 (269-328)||(6386-6446)
[»] scaffold0802 (1 HSPs)
scaffold0802 (277-328)||(1422-1474)


Alignment Details
Target: chr2 (Bit Score: 228; Significance: 1e-126; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 26 - 276
Target Start/End: Original strand, 30563730 - 30563981
Alignment:
Q  26 aacaagttgagatatatttatagagagaatgaaagtgaaagtatatgacagtaagaagagaaaggaaattgaggagaaactctctgttacagctcaattt 125  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30563730 aacaagttgagatatatttatagagagaatgaaagtgaaagtacatgacagtaagaagagaagggaaattgaggagaaactctctgttacagctcaattt 30563829  T
Q  126 ccatccatcacacggtatctccttccagctcataacttattgtcattaatgtac-tatgatgattcagcttctctaatggtcagtcaatttagtaaacaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  30563830 ccatccatcacacggtatctccttccagctcataacttattgtcattaatgtacttatgatgattcagcttctctaatggtcagtcaatttggtaaacaa 30563929  T
Q  225 aattgtactttcattgtttatctatatttaatacatctcaaatttaatatta 276  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30563930 aattgtactttcattgtttatctatatttaatacttctcaaatttaatatta 30563981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 7664727 - 7664642
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  7664727 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 6325399 - 6325316
Alignment:
Q  279 cttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctat 6325316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 8851151 - 8851233
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851233  T

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Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 8851637 - 8851551
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  8851637 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 8851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 26692871 - 26692789
Alignment:
Q  280 ttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  26692871 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26692789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 37720203 - 37720285
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  37720203 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 37720285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 18750178 - 18750097
Alignment:
Q  278 gcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccct 359  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  18750178 gcttaattgcacttctccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccct 18750097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 7664246 - 7664333
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || ||||||||  ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  7664246 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 7979564 - 7979650
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||| ||||||||||||| | ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  7979564 ttaggctttattgcacttttcc-cttatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 7979650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 16911321 - 16911238
Alignment:
Q  278 gcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||  | ||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||    
T  16911321 gcttaattgcactttcgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 16911238  T

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Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 16910827 - 16910912
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || | ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 16910912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 17850978 - 17851062
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctat 17851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 5378658 - 5378746
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||||||| | |||||| |||||  ||||||||||||||||    
T  5378658 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 17851457 - 17851371
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||  ||  ||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||    
T  17851457 aggcttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 17851371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 7980057 - 7979972
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| |  ||||||||||| |||||||| |||||||||| ||||||||||||||| |||||| ||| |||||    
T  7980057 aggcttaattgcactttttcctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctat 7979972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 19141898 - 19141818
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| || ||||||||||||||||||||| |||||||| | |||||||| |||||| ||||||||||||||||    
T  19141898 ttaattgcactttccc-cctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 19141818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 41790494 - 41790575
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||| |||||| ||||||||||| ||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||    
T  41790494 ttaattgcatttttccccctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 41790575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 41790969 - 41790881
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || |||| |||||||||||||| ||||||| || ||| |||| |||||| ||||||||||||||||    
T  41790969 ttaggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctat 41790881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 5380015 - 5379928
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || |||||||| |||||||||| |||||||||| | |||||| |||||  ||||||||||||||||    
T  5380015 taggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctat 5379928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 279 - 361
Target Start/End: Original strand, 19141446 - 19141528
Alignment:
Q  279 cttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||| ||||||||    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgca-ttttgcaccccatagttttaaacgagcgaatttaccccctat 19141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 5793450 - 5793532
Alignment:
Q  280 ttaattgcacttttcctccta-tagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| |||  ||||||||||||||||| |||||||| |  |||||||||||||| ||||||||||||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctat 5793532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 6324924 - 6325002
Alignment:
Q  284 ttgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| || ||||||||||||||||||| |||||||| | ||||||||||||||| |||||||| |||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctat 6325002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 26692399 - 26692481
Alignment:
Q  280 ttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| | | |||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 26692481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 18749729 - 18749810
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| ||||| ||||||| ||||| ||  |||||||||| |||||||||||||||  |||||||||||||||    
T  18749729 ttaattgcacttttactcctctagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctat 18749810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 38490894 - 38490817
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||| |  |||||||||| |||||||||| |||||||| ||||| ||||||||||| |||||||||    
T  38490894 ggcttaattgcactttcctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgc 38490817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 26841584 - 26841665
Alignment:
Q  274 ttaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  26841584 ttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 26841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 2639538 - 2639458
Alignment:
Q  275 taggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  2639538 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 2639458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 2638819 - 2638898
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||| ||||| | |||||  |||||||||||||| |||||||||| |||| |||||||||| |||||||||    
T  2638819 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 2638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 26842292 - 26842214
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||| |||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 26842214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 18296077 - 18296154
Alignment:
Q  278 gcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||| ||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18296154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 354
Target Start/End: Original strand, 7591204 - 7591279
Alignment:
Q  280 ttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||| ||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 7591279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 30190921 - 30190975
Alignment:
Q  275 taggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| || |||||  |||||||||||||| ||||||||||    
T  30190921 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 30190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 18296748 - 18296695
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| | |||||  |||||||||||||| ||||||||||    
T  18296748 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 18296695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 20347519 - 20347466
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| || |||  |||||||||||||| ||||||||||    
T  20347519 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 20347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 43495658 - 43495609
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgca 326  Q
    |||||||||||||||| || |||||| ||||| |||||||| ||||||||    
T  43495658 ggcttaattgcactttcccacctatattttgctaattgtgcgattttgca 43495609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 6171156 - 6171208
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacct 329  Q
    ||||||||||||||||||| |||||  ||||  |||||||| |||||||||||    
T  6171156 ggcttaattgcacttttccccctatcttttgttaattgtgcgattttgcacct 6171208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 26737481 - 26737532
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||| |||||||  ||||| |||||||| ||||||||||    
T  26737481 aggcttaattgcactttt-ctcctatcttttgctaattgtgcgattttgcacc 26737532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 32673193 - 32673145
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||| | |||||  |||||||||||||| ||||||||||    
T  32673193 ttaattgcactttttcccctatcttttgccaattgtgcgattttgcacc 32673145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 43464248 - 43464161
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  43464248 ttaggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 43464161  T

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Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 266 - 361
Target Start/End: Complemental strand, 26571230 - 26571133
Alignment:
Q  266 atttaata-ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||| |||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  26571230 atttaatacttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26571133  T

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Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 37780319 - 37780404
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||    
T  37780319 aggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctat 37780404  T

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Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 12498564 - 12498652
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  12498564 ttaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 12498652  T

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Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 22729492 - 22729409
Alignment:
Q  278 gcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  22729492 gcttaattgcacttttccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22729409  T

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Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 12498986 - 12498897
Alignment:
Q  273 attaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||    
T  12498986 attaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 12498897  T

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Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 37610201 - 37610282
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    |||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||    
T  37610201 aggcttaattgcacttttccccctatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgcccc 37610282  T

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Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 43463759 - 43463840
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  43463759 ttaattgcacttttccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43463840  T

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Target: chr5; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 10098996 - 10098910
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||| |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||  |||||||    
T  10098996 taggtttaattgcacttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 10098910  T

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Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 21207229 - 21207311
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 21207311  T

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Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 34147565 - 34147479
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || ||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  34147565 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctat 34147479  T

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Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 357
Target Start/End: Original strand, 22729008 - 22729088
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    ||||||||||||||||||| |||||||||||  |||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  22729008 ggcttaattgcacttttccccctatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc 22729088  T

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Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 37610671 - 37610587
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||| ||||| || |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  37610671 ggcttaattgtactttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctat 37610587  T

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Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 19514525 - 19514611
Alignment:
Q  277 ggcttaattgcacttttcctcc--tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||  ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19514611  T

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Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 41072270 - 41072183
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| |||||| ||||||||||||||||||||| ||||||| | ||||||||||  |||||||||||||| ||||||||||||||||    
T  41072270 ttaggtttaattacacttttcctcctatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctat 41072183  T

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Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 2817152 - 2817234
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| |||||||||| ||||||||||||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctat 2817234  T

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Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 26570724 - 26570814
Alignment:
Q  272 tattaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| ||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| |||||||| |||||||    
T  26570724 tattaggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 26570814  T

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Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 30401885 - 30401967
Alignment:
Q  280 ttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||||||| | ||||||||||||||||    
T  30401885 ttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctat 30401967  T

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Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 3888239 - 3888324
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| ||||| || ||||||||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||    
T  3888239 ggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888324  T

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Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 359
Target Start/End: Original strand, 10098519 - 10098602
Alignment:
Q  277 ggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccct 359  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||| |  |||||||||||||| ||||||||||||||    
T  10098519 ggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct 10098602  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 3888713 - 3888631
Alignment:
Q  280 ttaattgcacttttcc-tcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || |||| |||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 3888631  T

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Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 19515018 - 19514932
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||||||   ||||||||||||||    
T  19515018 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctat 19514932  T

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Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 34147140 - 34147224
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| | ||||||||  ||||||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  34147140 aggcttaattgcacttttcc-cttatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 34147224  T

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Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 37780796 - 37780715
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    |||||||||| |||||||| || |||||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  37780796 ggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgcccc 37780715  T

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Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 25941067 - 25940983
Alignment:
Q  278 gcttaattgcacttttcc-tcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| ||||||||||||  |||| ||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  25941067 gcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 25940983  T

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Target: chr5; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 2817626 - 2817544
Alignment:
Q  279 cttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||| || |  |||||||||||||| ||||||||| ||||||    
T  2817626 cttaattgcacttttccccctatagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctat 2817544  T

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Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 11316717 - 11316799
Alignment:
Q  280 ttaattgcacttttcc-tcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| |  ||| |||||||||| | ||||||||||||||    
T  11316717 ttaattgcacttttccctcctatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctat 11316799  T

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Target: chr5; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 25940520 - 25940606
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| ||||  | ||||||||||| ||||||||| ||||||||||  |||||||||||||| ||||||||||||||||    
T  25940520 aggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 25940606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 352
Target Start/End: Complemental strand, 11351483 - 11351405
Alignment:
Q  275 taggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgatttt 352  Q
    |||| ||||||||||||||| |||||||  |||||||||||||| |||||||||| |||| |||||||||| |||||||    
T  11351483 taggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 18817665 - 18817587
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18817587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 353
Target Start/End: Original strand, 31569905 - 31569983
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttg 353  Q
    |||| |||||||||||||||| |||||  |||| ||||||||| ||||||||||||||  ||||||||||  |||||||    
T  31569905 taggtttaattgcacttttccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 31569983  T

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Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 11317000 - 11316943
Alignment:
Q  304 tttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| |||||||||| ||| |||||||| || ||||||||||||||||    
T  11317000 tttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctat 11316943  T

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Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 18816949 - 18817030
Alignment:
Q  274 ttaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||| ||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  18816949 ttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 18817030  T

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Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 42919304 - 42919389
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| ||||| | |||||| ||| |||||||||| ||||| |||| |||  |||||||||| ||||||||| ||||||    
T  42919304 aggcttaattgctctttttcccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctat 42919389  T

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Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 22428931 - 22428985
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| || |||||  ||||| |||||||| ||||||||||    
T  22428931 ttaggcttaattgcactttcccccctatcttttgctaattgtgcgattttgcacc 22428985  T

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Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 22429252 - 22429198
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||| |||||| |||||  ||||| |||||||| ||||||||||    
T  22429252 ttaggcttaattgcatttttccccctatcttttgctaattgtgcgattttgcacc 22429198  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 16466799 - 16466746
Alignment:
Q  274 ttaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgca 326  Q
    |||||||||||||||||||| || |||||| ||||| |||||||| ||||||||    
T  16466799 ttaggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 26020449 - 26020502
Alignment:
Q  276 aggcttaattgcacttttcct-cctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||||| |||||  ||||| |||||||| ||||||||||    
T  26020449 aggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcacc 26020502  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 9665560 - 9665607
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  9665560 ttaattgcacttttcc-cctatcttttgctaattgtgcaattttgcacc 9665607  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 41383221 - 41383169
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||| |||||||| |||||  ||||| |||||||| ||||||||||    
T  41383221 aggcttaattgaacttttccccctattttttgctaattgtgcgattttgcacc 41383169  T

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Target: chr1 (Bit Score: 71; Significance: 4e-32; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 9347606 - 9347520
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  9347606 taggcttaattgcactttcccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 9347520  T

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Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 46824333 - 46824247
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  46824333 aggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctat 46824247  T

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Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 6703457 - 6703545
Alignment:
Q  274 ttaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  6703457 ttaggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 6703545  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 13918920 - 13918836
Alignment:
Q  278 gcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctat 13918836  T

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Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 27172116 - 27172200
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  27172116 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 27172200  T

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Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 13918446 - 13918531
Alignment:
Q  277 ggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  13918446 ggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13918531  T

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Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 20480167 - 20480252
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  20480167 aggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20480252  T

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Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 361
Target Start/End: Complemental strand, 999590 - 999494
Alignment:
Q  265 aatttaatattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||| | ||||||||||||||||||||| ||||||| ||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  999590 aatttaaaaataggcttaattgcacttttccccctatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctat 999494  T

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Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 49317752 - 49317836
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||||||    
T  49317752 ggcttaattgcacttttccccctatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctat 49317836  T

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Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 9347126 - 9347211
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9347211  T

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Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 26814694 - 26814779
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  26814694 ggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26814779  T

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Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 48105170 - 48105085
Alignment:
Q  277 ggcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48105085  T

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Target: chr1; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 50615674 - 50615590
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||    
T  50615674 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50615590  T

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Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 50623502 - 50623418
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||    
T  50623502 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 50623418  T

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Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 355
Target Start/End: Complemental strand, 6703948 - 6703869
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcc 355  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  6703948 ggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcc 6703869  T

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Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 359
Target Start/End: Original strand, 20371039 - 20371121
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccct 359  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  20371039 aggcttaattgcactttccc-cctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 20371121  T

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Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 28633718 - 28633805
Alignment:
Q  275 taggcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| ||| |||||||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||    
T  28633718 taggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctat 28633805  T

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Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 357
Target Start/End: Complemental strand, 32163099 - 32163016
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  32163099 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 32163016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 50526524 - 50526441
Alignment:
Q  279 cttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50526441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 4692488 - 4692402
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||||    
T  4692488 aggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctat 4692402  T

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Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 42611188 - 42611270
Alignment:
Q  280 ttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctat 42611270  T

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Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 50430132 - 50430050
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 50430050  T

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Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 999115 - 999196
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  999115 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 999196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 20371406 - 20371321
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgca-cctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||||||||||||| | ||||||||||||||    
T  20371406 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 20371321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 351
Target Start/End: Complemental strand, 20480680 - 20480591
Alignment:
Q  262 tcaaatttaatattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattt 351  Q
    ||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||    
T  20480680 tcaaaattattatttggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 21687025 - 21687110
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  21687025 ggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctat 21687110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 361
Target Start/End: Complemental strand, 49318224 - 49318135
Alignment:
Q  272 tattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||| |||||||||||||||| || ||||||||||||||||||||| |||||||| | |||||||| |||||| ||||||||||||||||    
T  49318224 tatttggcttaattgcactttcccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctat 49318135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 26815175 - 26815088
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || ||||||||  ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  26815175 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 26815088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 28634213 - 28634126
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||| |||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  28634213 taggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 28634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 42611665 - 42611583
Alignment:
Q  280 ttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  42611665 ttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctat 42611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 46823846 - 46823928
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 46823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 48104681 - 48104763
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48104763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 47498301 - 47498384
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||| ||||    
T  47498301 ggcttaattgcactttccc-cctatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctat 47498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 21687520 - 21687445
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgatttt 352  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||| ||||||||||||||||||| |||||||    
T  21687520 ggcttaatagcacttttccccctataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttt 21687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 50429655 - 50429741
Alignment:
Q  276 aggcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||| |||||||| | | ||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  50429655 aggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 50429741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 44911022 - 44911110
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || || |||| |||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||    
T  44911022 ttaggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 44911110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 32162734 - 32162797
Alignment:
Q  282 aattgcacttttcct-cctatagtttgccaattgtgcaattttgcacctcatagttttaaacga 344  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||    
T  32162734 aattgcactttttcttcctatagtttgccaattgtgcaattttgcaccccatagttttaaacga 32162797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 19008807 - 19008719
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || ||||||||  ||||||||| |||||||||| |||||||| |||||  | ||||||||||||||    
T  19008807 ttaggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctat 19008719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 49318496 - 49318412
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| ||||||||||  ||||||||| |||||||| | ||||||||||||||| |||||||  |||||||    
T  49318496 ggcttaattgcatttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctat 49318412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 44911477 - 44911406
Alignment:
Q  290 ttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||| ||||||||||||||||||||| ||||||||||  || |||| |||||| ||||||||||||||||    
T  44911477 ttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctat 44911406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 50949621 - 50949534
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| |||||||||||| || || ||||||||| ||||||||| |||||||| ||||| |||| |||||| ||||||||||||||||    
T  50949621 taggcataattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctat 50949534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 357
Target Start/End: Complemental strand, 27172596 - 27172514
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    |||||||||||||||||||| || | || |||||||||||||| |||||||| | ||| ||||||||||| ||||||||||||    
T  27172596 aggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttgcccc 27172514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 352
Target Start/End: Original strand, 50949164 - 50949237
Alignment:
Q  280 ttaattgcacttttcc-tcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgatttt 352  Q
    ||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| |||| |||||| |||||||    
T  50949164 ttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 49284408 - 49284487
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  49284408 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 49284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 19007734 - 19007796
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagtttt 338  Q
    ||||||||||||||||| || ||||||||||||||||||||| ||||||| ||  ||||||||    
T  19007734 aggcttaattgcactttcccccctatagtttgccaattgtgcgattttgccccctatagtttt 19007796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 44224169 - 44224088
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| || | | |||||| |||||||||  |||||||| | ||||||||||||||| |||||||| |||||||    
T  44224169 ttaattgcactttgccccatgtagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctat 44224088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 39692055 - 39691969
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || |||||| |||| ||||||||| |||||||||| |||  |||||||||   |||||||| ||||||    
T  39692055 aggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctat 39691969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 47498547 - 47498497
Alignment:
Q  278 gcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||| ||||||||||| |||||||||  |||||||||    
T  47498547 gcttaattgcacttttccccctatagtttgtcaattgtgcggttttgcacc 47498497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 4692022 - 4692106
Alignment:
Q  277 ggcttaattgcacttt-tcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| |||| ||||||||||| |||||| | |||||||| |  ||||||| |||||| | ||||||||||||||    
T  4692022 ggcttaattgcactttctcct-ctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctat 4692106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 328
Target Start/End: Complemental strand, 17518653 - 17518604
Alignment:
Q  279 cttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  17518653 cttaattgcacttttccccctatcttttgccaattgtgcgattttgcacc 17518604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 13589713 - 13589661
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| |||||  ||||| |||||||| ||||||||||    
T  13589713 aggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 13589661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 6002237 - 6002315
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||| ||||||||  |||||||||| |||  |||||||||| |||||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgc 6002315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 50615239 - 50615289
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgc 325  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||    
T  50615239 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 50623067 - 50623117
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgc 325  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||    
T  50623067 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 1176717 - 1176766
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgca 326  Q
    |||||||||||||||| || |||||| ||||| |||||||| ||||||||    
T  1176717 ggcttaattgcactttcccccctatattttgctaattgtgcgattttgca 1176766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 8109048 - 8108995
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| || |||  |||||||||||||| ||||||||||    
T  8109048 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 8108995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 47955305 - 47955358
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| || |||  |||||||||||||| ||||||||||    
T  47955305 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 47955358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 354
Target Start/End: Complemental strand, 6002946 - 6002870
Alignment:
Q  279 cttaattgcacttttcct-cctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||| | |||||  |||  ||||||||| |||||||||| |||  |||||||||| |||||||||    
T  6002946 cttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 6002870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 48190771 - 48190823
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||| | |||||  |||||||||||||| ||||||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacc 48190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 48405961 - 48406046
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  48405961 aggcttaattgcacttttccccctatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctat 48406046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 273 - 360
Target Start/End: Original strand, 292778 - 292866
Alignment:
Q  273 attaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccccta 360  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  292778 attaggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgcccccta 292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 28196828 - 28196742
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  28196828 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 4239420 - 4239335
Alignment:
Q  277 ggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 4239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 28196342 - 28196431
Alignment:
Q  273 attaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||||| || |||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  28196342 attaggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 28196431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 32703704 - 32703619
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 32703619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 9023241 - 9023329
Alignment:
Q  274 ttaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||    
T  9023241 ttaggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctat 9023329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 23539829 - 23539924
Alignment:
Q  265 aatttaatattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||    
T  23539829 aatttaattataggcttaattgcactttccc-cctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctat 23539924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 25161879 - 25161963
Alignment:
Q  278 gcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 25161963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 39744522 - 39744434
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  39744522 ttaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 39744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 9380797 - 9380710
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  9380797 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctat 9380710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 44468978 - 44468892
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||  | ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  44468978 ttaggcttaattgt-catttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 44468892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 9380307 - 9380392
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctat 9380392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 26207360 - 26207445
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||    
T  26207360 aggcttaattgcactttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 39086677 - 39086592
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||  || ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctat 39086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 169012 - 169099
Alignment:
Q  276 aggcttaattgcacttttc--ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||  | ||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||||    
T  169012 aggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctat 169099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 357
Target Start/End: Complemental strand, 293272 - 293190
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    |||||||||||||||||| || ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  293272 aggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcccc 293190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 9023735 - 9023649
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||    
T  9023735 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 9023649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 169493 - 169408
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 169408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 12757770 - 12757851
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||| ||||||||| |||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||| |||||||    
T  12757770 ttaattgtacttttccttctatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctat 12757851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 39744026 - 39744115
Alignment:
Q  273 attaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || |||||||||| |||||||||| ||||| |||| |||| |||||||||| ||||||||||||||||    
T  39744026 attaggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctat 39744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 43292038 - 43292122
Alignment:
Q  278 gcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||  | ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 43292122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 26207801 - 26207715
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| |||||| || ||||||||||||||||||| |||||||||| ||| |||| |||||| ||||||||||||||||    
T  26207801 aggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctat 26207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 32703224 - 32703310
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || |||| |||||||||||||| ||| |||||| | ||||||||||||| ||||||||||||||||    
T  32703224 aggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctat 32703310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 23540306 - 23540221
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| | ||||||||||| ||||||||| ||||||||||  |||||||||||||| ||||||| ||||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctat 23540221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 43292411 - 43292326
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| || | ||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 43292326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 48406435 - 48406354
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||| ||||| || |||||| |||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||    
T  48406435 ttaattgtactttcccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 48406354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 39912550 - 39912456
Alignment:
Q  267 tttaatattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||| || ||||||||| |||||||||| |||||||||  ||||||||| |||||||| | |||||||||||||||  ||||||||| |||||    
T  39912550 tttaatttttggcttaattacacttttccttctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctat 39912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 12758260 - 12758173
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| ||||||||||||||  |||||||||||||||||| ||   ||||||||  ||||||||||||||| | ||||||||||||||    
T  12758260 ttaggtttaattgcactttttttcctatagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctat 12758173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 354
Target Start/End: Original strand, 50678777 - 50678857
Alignment:
Q  275 taggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  50678777 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 50678857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 25162352 - 25162282
Alignment:
Q  291 tttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| |||||| |||| ||||||||  |||||||||  ||||||||||||||| ||||||||||||||||    
T  25162352 tttccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctat 25162282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 36095816 - 36095902
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| ||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| ||||||||| ||||||    
T  36095816 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctat 36095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 39912053 - 39912134
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    ||||||||||||||||||||||| ||||||||   |||||||| ||||| || | ||||||||||||||| ||||||||||||    
T  39912053 aggcttaattgcacttttcctccctatagtttattaattgtgcgattttacatc-catagttttaaacgaacgattttgcccc 39912134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 36096526 - 36096451
Alignment:
Q  280 ttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 36096451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 50679478 - 50679400
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||||||||||| | |||||||||| |||  |||||||||| |||||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgc 50679400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 56505691 - 56505757
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaa 340  Q
    ||||||||||||||||||||| || |||  |||||||||||||| |||||||||| |||| ||||||    
T  56505691 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaa 56505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 3930535 - 3930482
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||||| |||||  ||||| |||||||| ||||||||||    
T  3930535 taggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 3930482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 11241718 - 11241663
Alignment:
Q  273 attaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||| |||||||| |||||  |||||||||||||  ||||||||||    
T  11241718 attaggcttaattgtacttttccccctatcttttgccaattgtgggattttgcacc 11241663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 43051307 - 43051228
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||| ||||| | |||||  |||||||||||||  |||||||||| |||  |||||||||| |||||||||    
T  43051307 aggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgc 43051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 328
Target Start/End: Complemental strand, 22681935 - 22681881
Alignment:
Q  275 taggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| ||||||||  ||||  |||||||||||||||||||    
T  22681935 taggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 24775838 - 24775785
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||| ||||||||  |||| ||||||||| ||||||||||    
T  24775838 aggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcacc 24775785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 7e-31; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 16169174 - 16169258
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  16169174 ggcttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 16169258  T

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Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 41662520 - 41662606
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  41662520 aggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 41662606  T

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Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 6199154 - 6199065
Alignment:
Q  273 attaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  6199154 attaggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 6199065  T

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Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 361
Target Start/End: Original strand, 37396704 - 37396793
Alignment:
Q  273 attaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  37396704 attaggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37396793  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 9623497 - 9623587
Alignment:
Q  272 tattaggcttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||    
T  9623497 tatttggcttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 9623587  T

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Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 17431286 - 17431372
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||    
T  17431286 aggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctat 17431372  T

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Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 24473823 - 24473737
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||||| |||||||    
T  24473823 aggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctat 24473737  T

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Target: chr8; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 16169661 - 16169576
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  16169661 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 16169576  T

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Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 25439176 - 25439095
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||    
T  25439176 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 25439095  T

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Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 37397199 - 37397114
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||| || ||||||||||||||| ||| ||||||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctat 37397114  T

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Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 20861693 - 20861607
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| |||| || |||||||| |||||||||||| |||||||||| ||||||||||||||| |||||||||| |||||    
T  20861693 aggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctat 20861607  T

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Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 34498125 - 34498207
Alignment:
Q  280 ttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| || ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||    
T  34498125 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctat 34498207  T

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Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 24473343 - 24473428
Alignment:
Q  277 ggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| || ||||||||||||||||||||  |||||||||| |||| ||||||| || ||||||||||||||||    
T  24473343 ggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctat 24473428  T

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Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 34498612 - 34498524
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || |||||||||| |||||||| |||||||||| ||||||||||||| |  |||| ||||||||||    
T  34498612 ttaggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctat 34498524  T

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Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 13936722 - 13936800
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||||| |||||  ||| |||||||||| |||||||||| |||| |||||||||| |||||||||    
T  13936722 aggcttaattgcacttttccccctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttgc 13936800  T

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Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 33727136 - 33727074
Alignment:
Q  299 tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||    
T  33727136 tatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctat 33727074  T

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Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 13026632 - 13026713
Alignment:
Q  274 ttaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||||| | |||||  |||||||||||||| ||||||||||||||  |||||||||| |||||||||    
T  13026632 ttaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgc 13026713  T

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Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 2856523 - 2856611
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||  |||||||  |||||||    
T  2856523 ttaggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctat 2856611  T

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Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 6198655 - 6198743
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||  || ||| || | |||||||||| ||||||||||  |||||||||||||| ||||||||||||||||    
T  6198655 ttaggcttaattgcacttttctcccatatggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 6198743  T

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Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 15444704 - 15444616
Alignment:
Q  274 ttaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| |||||||||||||| || |||||| ||| |||||||||| |||||||||| ||||||||||||||| |||||||  |||||||    
T  15444704 ttaggtttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctat 15444616  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Original strand, 25438794 - 25438856
Alignment:
Q  279 cttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaa 340  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

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Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 9823416 - 9823337
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  9823416 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 9823337  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 361
Target Start/End: Original strand, 15444213 - 15444296
Alignment:
Q  279 cttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||| |||||| | |||||||||||||||||| ||||||| ||   ||||||||||||||| ||||||||| ||||||    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctat 15444296  T

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Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 9623935 - 9623866
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctc--atagttttaaacga 344  Q
    |||||||||||||||||| ||||||||||||||||| |||  |||||||||| |  ||||||||||||||    
T  9623935 ggcttaattgcacttttcatcctatagtttgccaatcgtgtgattttgcaccccatatagttttaaacga 9623866  T

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Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 39724102 - 39724024
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 39724024  T

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Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 323
Target Start/End: Original strand, 9465606 - 9465653
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaatttt 323  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||    
T  9465606 aggcttaattgcacttttcctcctatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 354
Target Start/End: Complemental strand, 13027332 - 13027257
Alignment:
Q  280 ttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 13027257  T

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Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 43162229 - 43162287
Alignment:
Q  272 tattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctc 330  Q
    |||| ||||||||||||||||||| |||||| ||||  |||||||| ||||||||||||    
T  43162229 tatttggcttaattgcacttttccccctatattttgttaattgtgcgattttgcacctc 43162287  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 12281123 - 12281178
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctc 330  Q
    |||||||||||||||||||| || |||  |||||||||||||| ||||||||||||    
T  12281123 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctc 12281178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 9822748 - 9822826
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||  ||||||||| |||||||||| |||  |||||||||| |||||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 9822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 22851390 - 22851468
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||| ||||||||| |||||||||| |||  |||||||| | |||||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgc 22851468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 13937445 - 13937365
Alignment:
Q  275 taggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||| || |||||  |||| ||||||||| | |||||||| |||  ||||||||||  ||||||||    
T  13937445 taggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgc 13937365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 41662457 - 41662405
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| || |||  |||||||||||||| ||||||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 41662405  T

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Target: chr3 (Bit Score: 69; Significance: 7e-31; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 42672978 - 42673062
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  42672978 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctat 42673062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 44008454 - 44008370
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  44008454 ggcttaattgcacttttcatcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctat 44008370  T

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Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 3353606 - 3353520
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  3353606 taggtttagttgcacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctat 3353520  T

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Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 40848520 - 40848605
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||    
T  40848520 aggcttaattgcacttttccccctatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctat 40848605  T

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Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 42673349 - 42673265
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  42673349 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42673265  T

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Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 48159895 - 48159982
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  48159895 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48159982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 279 - 361
Target Start/End: Complemental strand, 22429647 - 22429565
Alignment:
Q  279 cttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  22429647 cttaattgcactttccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22429565  T

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Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 268 - 361
Target Start/End: Original strand, 27238456 - 27238550
Alignment:
Q  268 ttaatattaggcttaattgcacttttcc-tcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||    
T  27238456 ttaattttaggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctat 27238550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 10348853 - 10348768
Alignment:
Q  277 ggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  10348853 ggcttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10348768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 24485513 - 24485429
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||||||    
T  24485513 ggcttaattgcacttttctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 24485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 40849017 - 40848930
Alignment:
Q  275 taggcttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||    
T  40849017 taggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctat 40848930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 53766166 - 53766248
Alignment:
Q  280 ttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  53766166 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 53766248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 24485025 - 24485106
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||| || |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||||||    
T  24485025 ttaattacatttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctat 24485106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 47666389 - 47666304
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctat 47666304  T

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Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 48160387 - 48160302
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 48160302  T

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Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 351
Target Start/End: Original strand, 3353123 - 3353202
Alignment:
Q  272 tattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattt 351  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||    
T  3353123 tatttggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 27238951 - 27238869
Alignment:
Q  280 ttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||    
T  27238951 ttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 27238869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 53687887 - 53687973
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||    
T  53687887 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 53687973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 26007181 - 26007266
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| ||| || ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||    
T  26007181 aggcttaattgcattttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctat 26007266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 44007967 - 44008052
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||||||||  ||||||||||| |||||| || |||||||||||||| ||||||||||||||||    
T  44007967 ggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctat 44008052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 26007676 - 26007588
Alignment:
Q  274 ttaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||||||||| ||||| |||||||||| ||||||||||||||||    
T  26007676 ttaggtttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctat 26007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 53688356 - 53688272
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||  | ||||||||||||||||||||| |||||||||  |||||||| |||||| ||||||||||||||||    
T  53688356 ggcttaattgcactttctcccctatagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctat 53688272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 361
Target Start/End: Complemental strand, 36181050 - 36180959
Alignment:
Q  271 atattaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||| |||||| ||| ||||||||||||||| |||||||  |||||||    
T  36181050 atattaggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctat 36180959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 36180555 - 36180639
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| ||||| ||||||||||| ||||||||| |||||||| | ||||||||||||||| |||||||| |||||||    
T  36180555 aggcttaattgcacatttcc-cctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctat 36180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 42456247 - 42456164
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || |||| ||||  |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  42456247 ggcttaattgcactttccc-cctaaagttccccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 42456164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 22429159 - 22429243
Alignment:
Q  278 gcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| | |||||| |||||||||||||| | ||||||||  |||||||||||||| |||||||| |||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctat 22429243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 53766634 - 53766569
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaa 340  Q
    |||||||||||||||||||| || |||||||||| |||||||||||||||||||  ||||||||||    
T  53766634 aggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa 53766569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 10348480 - 10348564
Alignment:
Q  278 gcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||| | | ||||||||| ||||||| |||||||||| | |||| |||||||||| |||||||| |||||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctat 10348564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 47665908 - 47665996
Alignment:
Q  274 ttaggcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| | ||| |||||||| ||||||||| |||||||||||||| |||| ||||||  |||||| || |||||    
T  47665908 ttaggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctat 47665996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 21896564 - 21896487
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||| |||| | |||||| |||| ||||||||| |||||||||| ||| |||||| |||| |||||||||    
T  21896564 ggcttaattgcattttttcccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgc 21896487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 42455786 - 42455853
Alignment:
Q  273 attaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagtttta 339  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||| ||||||| ||  |||||||||    
T  42455786 attaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 8315138 - 8315084
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| || |||||| |||| ||||||||| ||||||||||    
T  8315138 ttaggcttaattgcactttcccccctatattttgtcaattgtgcgattttgcacc 8315084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 361
Target Start/End: Complemental strand, 1928491 - 1928403
Alignment:
Q  273 attaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||| ||||||||| ||||||||| |||  |||||||||||||| |||||||||| |||| ||||||||||  | |||||| ||||||    
T  1928491 attaggtttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctat 1928403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 8314013 - 8314098
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| | |||||| |||| ||||||||| ||||||||||  ||  |||||||||  ||||||||| ||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctat 8314098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 47871176 - 47871124
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| |||||  ||||| |||||||| ||||||||||    
T  47871176 aggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 47871124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 14016020 - 14015966
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||| ||||||||||||||| ||||||  ||||| |||||||| ||||||||||    
T  14016020 ttaggtttaattgcacttttcatcctatcttttgctaattgtgcgattttgcacc 14015966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 9026734 - 9026787
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||| ||||||||| ||||||||||||  ||||  |||||||||||||||||||    
T  9026734 taggtttaattgcatttttcctcctatcttttgttaattgtgcaattttgcacc 9026787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 20969073 - 20969021
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| || |||  |||||||||||||| ||||||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 20969021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 26540694 - 26540742
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||| | |||||  |||| ||||||||||||||||||||    
T  26540694 ttaattgcacttttgcccctattttttgtcaattgtgcaattttgcacc 26540742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 18864457 - 18864371
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||    
T  18864457 taggcttaattgtacttttccccctatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctat 18864371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 13744287 - 13744202
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  13744287 aggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13744202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 266 - 361
Target Start/End: Original strand, 37971949 - 37972045
Alignment:
Q  266 atttaatattaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||| |||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  37971949 atttaaaattaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972045  T

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Target: chr7; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 10533032 - 10533119
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  10533032 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10533119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 37889315 - 37889228
Alignment:
Q  275 taggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  37889315 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37889228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 37972451 - 37972365
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  37972451 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37972365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 9035347 - 9035262
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 9035262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 37888833 - 37888918
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 37888918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 20418885 - 20418973
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| |||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  20418885 ttaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20418973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 48359320 - 48359404
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||    
T  48359320 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctat 48359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 20419379 - 20419293
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  20419379 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 20419293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 22740155 - 22740241
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  22740155 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 22740241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 22740641 - 22740560
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||    
T  22740641 ttaattgcacttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctat 22740560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 3204669 - 3204752
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||    
T  3204669 ggcttaattgcactttccc-cctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctat 3204752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 42419084 - 42418997
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgca-cctcatagttttaaacgaccgattttgccccctat 361  Q
    |||| |||||||||||||||| |||||||||||||||||||||  ||||||| || ||||||||||||||| ||||||||||||||||    
T  42419084 taggtttaattgcacttttccccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctat 42418997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 3205148 - 3205062
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  3205148 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctat 3205062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 17156966 - 17157052
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||    
T  17156966 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctat 17157052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 18863970 - 18864052
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 18864052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 38826968 - 38826882
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| |||||| || ||||||||| ||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  38826968 aggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctat 38826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 361
Target Start/End: Complemental strand, 48359713 - 48359627
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||| ||||||||||||| | |||||||||| |||||||||| |||||||||| |||||||| |||||| ||||||||||||||||    
T  48359713 taggcataattgcactttttcccctatagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctat 48359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 13741557 - 13741642
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| || |||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 13741642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 29292921 - 29293007
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||||||||||||| |||||||| | ||| |||| |||||| ||||||||||||||||    
T  29292921 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctat 29293007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 9034864 - 9034953
Alignment:
Q  274 ttaggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctc-atagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| || |||| |||||||||||||| ||| |||||| | |||||||||||||| ||||||||||||||||    
T  9034864 ttaggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctat 9034953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 36527852 - 36527767
Alignment:
Q  277 ggcttaattgcacttttcc-tcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| || ||||||||||||||| ||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  36527852 ggcttaattgcatttttccctcatatagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctat 36527767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 29293400 - 29293315
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| || ||||||||||||||||||| |||||||||  ||| |||| |||||| ||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctat 29293315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 357
Target Start/End: Original strand, 36527387 - 36527464
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    |||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||||||||||||| | ||||| ||||    
T  36527387 ttaattgcactttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttcccc 36527464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 42418590 - 42418676
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||| ||||||||| || |||||||||| |||||||| |||||| | |  |||||||||||||| ||||||||||||||||    
T  42418590 aggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctat 42418676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 44599478 - 44599567
Alignment:
Q  266 atttaatattaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||| || |||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  44599478 atttaatttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 44599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 44600190 - 44600111
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  44600190 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 44600111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 13863310 - 13863391
Alignment:
Q  274 ttaggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||| ||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  13863310 ttaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 13863391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 16199032 - 16198967
Alignment:
Q  276 aggcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaa 340  Q
    |||||||||||||||||| | | | |||||||||||||||||| |||||||||| |||||||||||    
T  16199032 aggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 13864011 - 13863933
Alignment:
Q  276 aggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||| | |||||  |||||||||||||| | |||||||| |||| |||||||||| |||||||||    
T  13864011 aggcttaattgcacttttcacccctatcttttgccaattgtgcga-tttgcaccccatatttttaaacgagcgattttgc 13863933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 8643823 - 8643742
Alignment:
Q  274 ttaggcttaattgcacttttcct-cctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    ||||||||||||||||||||| | |||||  ||| |||||||||| |||||||||| |||  | |||||||| |||||||||    
T  8643823 ttaggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgc 8643742  T

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Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 353
Target Start/End: Complemental strand, 46816368 - 46816288
Alignment:
Q  274 ttaggcttaattgcac-ttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttg 353  Q
    |||||||||||||||| ||||||  ||||  ||| |||||| ||| |||||||||| |||| |||||||||| ||||||||    
T  46816368 ttaggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 9412382 - 9412327
Alignment:
Q  274 ttaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| || |||||  |||||||||||||| ||||||||||    
T  9412382 ttaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 9412327  T

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Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Original strand, 23686421 - 23686472
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| |||||  ||||| |||||| ||||||||||||    
T  23686421 ggcttaattgcacttttccccctatcttttgctaattgtacaattttgcacc 23686472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 8953941 - 8953891
Alignment:
Q  278 gcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||| |||||  ||||  |||||||||||||||||||    
T  8953941 gcttaattgcacttttccccctatcttttgttaattgtgcaattttgcacc 8953891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 328
Target Start/End: Complemental strand, 18925373 - 18925324
Alignment:
Q  278 gcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||||||||||    
T  18925373 gcttaattgcacttttcct-ctatattttgctaattgtgcgattttgcacc 18925324  T

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Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 329
Target Start/End: Original strand, 18925062 - 18925115
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacct 329  Q
    |||||||||||||||||| ||| |||  ||||| ||||||||||||||||||||    
T  18925062 ggcttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacct 18925115  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 3687710 - 3687658
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| || |||  |||||||||||||| ||||||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 3687658  T

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Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 328
Target Start/End: Original strand, 13772637 - 13772693
Alignment:
Q  273 attaggcttaattgcacttttcct-cctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||||||| |||||  ||||| |||||||  ||||||||||    
T  13772637 attaggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcacc 13772693  T

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Target: scaffold0017 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 185328 - 185243
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 185243  T

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Target: scaffold0017; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 184840 - 184924
Alignment:
Q  278 gcttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||  | |||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||| |||||    
T  184840 gcttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctat 184924  T

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Target: scaffold0176 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 19620 - 19705
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| |||||| | ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  19620 aggcttaattgcaattttccccatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 19705  T

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Target: scaffold0176; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 20111 - 20012
Alignment:
Q  262 tcaaatttaatattaggcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccccta 360  Q
    ||||||||||||| |||||||||||||||||||| ||| |||||||| ||||||||| ||||||| || |||||||||||||   |||||||||||||||    
T  20111 tcaaatttaatat-aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgcccccta 20013  T

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Target: scaffold0069 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 359
Target Start/End: Original strand, 50074 - 50156
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccct 359  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  50074 aggcttaattgcactttccc-cctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccct 50156  T

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Target: scaffold0069; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 50560 - 50475
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgca-cctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||||||||||||| | ||||||||||||||    
T  50560 ggcttaattgcacttttccccctatagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctat 50475  T

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Target: scaffold0041 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 38750 - 38664
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||||||||    
T  38750 aggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctat 38664  T

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Target: scaffold0041; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 38284 - 38336
Alignment:
Q  309 caattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||| |||||||| | |||||||||||| || ||||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctat 38336  T

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Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 32734047 - 32733965
Alignment:
Q  280 ttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  32734047 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 32733965  T

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Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 10087912 - 10087827
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| || | ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 10087827  T

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Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 33974353 - 33974268
Alignment:
Q  277 ggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| || ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctat 33974268  T

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Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 22684411 - 22684327
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| | ||||||||||||||||||  |||||||||| ||||||||||||| | ||||||||||||||||    
T  22684411 ggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22684327  T

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Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 22754657 - 22754741
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| | ||||||||||||||||||  |||||||||| ||||||||||||| | ||||||||||||||||    
T  22754657 ggcttaattgcacttttccccttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctat 22754741  T

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Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 29074426 - 29074341
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||| || ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||| ||||||||    
T  29074426 aggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29074341  T

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Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 29079190 - 29079105
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||| || ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||| ||||||||    
T  29079190 aggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29079105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 29106999 - 29106914
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||| || ||||||||||||||||||||| |||||||||| |||||||| |||||| ||||||| ||||||||    
T  29106999 aggcttaattgctctttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctat 29106914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 7654603 - 7654517
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||||||  || ||||||||||||    
T  7654603 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctat 7654517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 276 - 357
Target Start/End: Complemental strand, 13177110 - 13177029
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    ||||||| |||||||||||| |||||||| || ||||||||  ||||| |||||||||||||||||||| ||||||||||||    
T  13177110 aggcttagttgcacttttccccctatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgcccc 13177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 361
Target Start/End: Complemental strand, 22755142 - 22755058
Alignment:
Q  278 gcttaattgcacttttcctcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| | | |||||||| ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctat 22755058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 403651 - 403711
Alignment:
Q  279 cttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagtttta 339  Q
    ||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||    
T  403651 cttaattgcactttctttcctatagtttgccaattttgcaattttgcacctcatagtttta 403711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 354
Target Start/End: Complemental strand, 33829692 - 33829612
Alignment:
Q  275 taggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  33829692 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 33829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 361
Target Start/End: Complemental strand, 2354865 - 2354779
Alignment:
Q  276 aggcttaattgcacttttcctc-ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||| ||||||   |||||||||| ||||||||| |||||||||| ||| |||| |||||| | ||||||||||||||    
T  2354865 aggcttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctat 2354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 33828990 - 33829068
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||||||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 33829068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 361
Target Start/End: Original strand, 2354409 - 2354493
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||| |||||| ||||||||||  ||||||| | |||||||| | ||| |||| |||||| ||||||| ||||||||    
T  2354409 ggcttaattgcatttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctat 2354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 13579707 - 13579653
Alignment:
Q  274 ttaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||||  ||||| |||||| |||||||| ||||||||||    
T  13579707 ttaggcttaattgcacttttctccctatcgtttgctaattgtgcgattttgcacc 13579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 328
Target Start/End: Original strand, 10039674 - 10039727
Alignment:
Q  275 taggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||||| |||||  ||||| |||||||| ||||||||||    
T  10039674 taggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 10039727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 3825530 - 3825578
Alignment:
Q  280 ttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||| |||||| ||||| |||||||| ||||||||||    
T  3825530 ttaattgcacttttccccctatattttgctaattgtgcgattttgcacc 3825578  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 298 - 361
Target Start/End: Original strand, 32733579 - 32733642
Alignment:
Q  298 ctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||| | | |||||||| | ||||||||||||||| | |||||||| |||||    
T  32733579 ctatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctat 32733642  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 33973882 - 33973949
Alignment:
Q  294 cctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||| || |||||| |||||| || | ||||||||| |||| |||||||| |||||||    
T  33973882 cctcctatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctat 33973949  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 11656836 - 11656784
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||| |||||||  ||||| |||||||| ||||||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgcacc 11656784  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 361
Target Start/End: Original strand, 13176640 - 13176704
Alignment:
Q  297 cctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    ||||||||||||||||||| | |||||| | | |||  ||||||| || ||||||||||||||||    
T  13176640 cctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctat 13176704  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 21031978 - 21032030
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||| ||||   ||||| |||||||| ||||||||||    
T  21031978 aggcttaattgcacttttccccctaacttttgctaattgtgcgattttgcacc 21032030  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 326
Target Start/End: Original strand, 30388055 - 30388111
Alignment:
Q  270 aatattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgca 326  Q
    |||||| |||||||||||||||| || |||||  ||||| |||||||| ||||||||    
T  30388055 aatatttggcttaattgcactttcccccctatcttttgctaattgtgcgattttgca 30388111  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 33655169 - 33655117
Alignment:
Q  276 aggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||| ||| | |||  ||||| |||||||||||||||||||    
T  33655169 aggcttaattgcacttgtccccttatcttttgctaattgtgcaattttgcacc 33655117  T

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Target: scaffold0460 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 357
Target Start/End: Complemental strand, 816 - 736
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgcccc 357  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||||||||    
T  816 ggcttaattgcactttttcccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgcccc 736  T

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Target: scaffold0460; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 329 - 415
Alignment:
Q  276 aggcttaattgcacttttcctcc-tatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||||| || ||||||||| ||||||||| |||||||| | ||||||||||||||| ||||||||||||||||    
T  329 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctat 415  T

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Target: scaffold0029 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 9904 - 9991
Alignment:
Q  276 aggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacctc-atagttttaaacgaccgattttgccccctat 361  Q
    |||||||||||||||||| || ||||||||||||||||||||| ||||| |||| | |||||||||||||| ||||||||||||||||    
T  9904 aggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctat 9991  T

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Target: scaffold0029; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 10380 - 10311
Alignment:
Q  268 ttaatattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacctcatagtttt 338  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||||||  ||||||||    
T  10380 ttaatattaggcttaatagcacttttcc-cctatagtttgccaattgtccgattttgcaccctatagtttt 10311  T

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Target: scaffold0110 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 328
Target Start/End: Complemental strand, 45865 - 45809
Alignment:
Q  272 tattaggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  45865 tattaggcttaattgcacttttccccctatcttttgccaattgtgcgattttgcacc 45809  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 17209 - 17158
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| |||||  ||||| |||||||||||||||||||    
T  17209 ggcttaattgcacttttccccctatcttttgctaattgtgcaattttgcacc 17158  T

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Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 6849 - 6771
Alignment:
Q  277 ggcttaattgcacttttc-ctcctatagtttgccaattgtgcaattttgcacctcatagttttaaacgaccgattttgc 354  Q
    |||||||||||| ||||| | |||||  |||||||||||||| |||||||||| |||  |||||||||| |||||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgc 6771  T

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Target: scaffold0319 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 6750 - 6699
Alignment:
Q  277 ggcttaattgcacttttcctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||||| |||||  ||||| |||||||| ||||||||||    
T  6750 ggcttaattgcacttttccccctatcttttgctaattgtgcgattttgcacc 6699  T

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Target: scaffold0319; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 328
Target Start/End: Original strand, 6386 - 6446
Alignment:
Q  269 taatattaggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacc 328  Q
    |||||| |||||||||||||||||| || |||||  ||||| |||||||| ||||||||||    
T  6386 taatataaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 6446  T

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Target: scaffold0802 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 1474 - 1422
Alignment:
Q  277 ggcttaattgcactttt-cctcctatagtttgccaattgtgcaattttgcacc 328  Q
    ||||||||||||||||| || |||||  |||||||||||||| ||||||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgcacc 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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