View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6259_high_1 (Length: 854)

Name: NF6259_high_1
Description: NF6259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6259_high_1
NF6259_high_1
[»] chr5 (73 HSPs)
chr5 (576-814)||(14628063-14628300)
chr5 (107-342)||(17965806-17966043)
chr5 (444-563)||(14628345-14628464)
chr5 (113-342)||(17966773-17967002)
chr5 (107-193)||(1396375-1396461)
chr5 (107-193)||(1397259-1397345)
chr5 (107-268)||(25983400-25983559)
chr5 (12-82)||(14628973-14629043)
chr5 (225-322)||(33995147-33995244)
chr5 (225-298)||(18307255-18307328)
chr5 (223-322)||(18538332-18538431)
chr5 (226-305)||(34682251-34682330)
chr5 (232-306)||(39743154-39743228)
chr5 (225-322)||(8702197-8702294)
chr5 (225-322)||(34123934-34124031)
chr5 (225-286)||(38968108-38968169)
chr5 (226-322)||(28387246-28387342)
chr5 (225-329)||(34122494-34122598)
chr5 (230-322)||(41201705-41201797)
chr5 (225-268)||(19037469-19037512)
chr5 (223-286)||(25497524-25497587)
chr5 (222-268)||(4204207-4204253)
chr5 (226-268)||(28388519-28388561)
chr5 (228-282)||(42539375-42539429)
chr5 (225-298)||(542789-542862)
chr5 (225-266)||(13837757-13837798)
chr5 (225-286)||(25890007-25890068)
chr5 (225-266)||(28238172-28238213)
chr5 (225-278)||(30708924-30708977)
chr5 (229-306)||(41799770-41799847)
chr5 (228-276)||(5799-5847)
chr5 (225-325)||(1035158-1035258)
chr5 (225-268)||(7757356-7757399)
chr5 (225-268)||(11346038-11346081)
chr5 (122-193)||(25984125-25984196)
chr5 (221-268)||(29430053-29430100)
chr5 (226-268)||(3603148-3603190)
chr5 (226-268)||(13838424-13838466)
chr5 (225-263)||(27659976-27660014)
chr5 (228-266)||(38855713-38855751)
chr5 (225-271)||(39742603-39742649)
chr5 (225-306)||(7017505-7017586)
chr5 (225-266)||(8577007-8577048)
chr5 (225-266)||(11029003-11029044)
chr5 (225-266)||(14280899-14280940)
chr5 (225-266)||(19035271-19035312)
chr5 (225-270)||(27532616-27532661)
chr5 (225-266)||(28876676-28876717)
chr5 (225-298)||(41798819-41798892)
chr5 (226-266)||(37814615-37814655)
chr5 (225-276)||(7762243-7762294)
chr5 (221-268)||(13707926-13707973)
chr5 (226-269)||(20200148-20200191)
chr5 (225-268)||(25877652-25877695)
chr5 (225-268)||(25897078-25897121)
chr5 (225-268)||(29430577-29430620)
chr5 (225-268)||(30192523-30192566)
chr5 (225-260)||(31787559-31787594)
chr5 (225-268)||(35671113-35671156)
chr5 (227-266)||(38408470-38408509)
chr5 (221-272)||(41065911-41065962)
chr5 (225-268)||(42098334-42098377)
chr5 (225-267)||(8046-8088)
chr5 (225-266)||(19041116-19041157)
chr5 (225-298)||(20192354-20192427)
chr5 (225-266)||(27662243-27662284)
chr5 (225-278)||(28880343-28880396)
chr5 (230-267)||(30354400-30354437)
chr5 (227-264)||(30705168-30705205)
chr5 (225-266)||(30708872-30708913)
chr5 (223-264)||(33993315-33993356)
chr5 (228-265)||(35926396-35926433)
chr5 (229-266)||(36503106-36503143)
[»] chr1 (93 HSPs)
chr1 (107-342)||(48751285-48751526)
chr1 (107-342)||(51289837-51290076)
chr1 (107-278)||(46217195-46217370)
chr1 (107-278)||(46216419-46216593)
chr1 (107-267)||(29425212-29425377)
chr1 (107-268)||(46043537-46043704)
chr1 (107-193)||(29424494-29424580)
chr1 (107-193)||(51288976-51289062)
chr1 (110-298)||(45943608-45943798)
chr1 (107-186)||(48749880-48749959)
chr1 (107-193)||(3940063-3940149)
chr1 (221-298)||(44336250-44336327)
chr1 (225-305)||(11183180-11183260)
chr1 (135-268)||(3941053-3941192)
chr1 (129-193)||(46044649-46044713)
chr1 (221-286)||(6557928-6557993)
chr1 (225-322)||(6562160-6562257)
chr1 (229-342)||(23276111-23276224)
chr1 (222-305)||(19499108-19499191)
chr1 (219-282)||(36072386-36072449)
chr1 (221-266)||(471091-471136)
chr1 (225-278)||(13636121-13636174)
chr1 (225-286)||(44470010-44470071)
chr1 (231-299)||(40057659-40057727)
chr1 (230-286)||(41804037-41804093)
chr1 (226-286)||(52802143-52802203)
chr1 (223-282)||(7981136-7981195)
chr1 (222-277)||(19054246-19054301)
chr1 (225-268)||(19161923-19161966)
chr1 (223-322)||(46973181-46973279)
chr1 (221-303)||(50113303-50113385)
chr1 (225-266)||(3728768-3728809)
chr1 (225-266)||(3944007-3944048)
chr1 (225-266)||(3993842-3993883)
chr1 (225-266)||(8548668-8548709)
chr1 (225-266)||(9711650-9711691)
chr1 (225-278)||(19159644-19159697)
chr1 (221-266)||(22524159-22524204)
chr1 (226-267)||(26633559-26633600)
chr1 (225-322)||(38689909-38690005)
chr1 (225-266)||(38771662-38771703)
chr1 (225-285)||(1656088-1656148)
chr1 (225-281)||(9710596-9710652)
chr1 (222-342)||(21944376-21944496)
chr1 (247-322)||(5077918-5077993)
chr1 (223-322)||(13173813-13173911)
chr1 (221-268)||(13178127-13178174)
chr1 (227-266)||(15051349-15051388)
chr1 (225-264)||(31783714-31783753)
chr1 (223-286)||(36076555-36076618)
chr1 (225-268)||(44598905-44598948)
chr1 (222-268)||(8460093-8460139)
chr1 (226-264)||(13633904-13633942)
chr1 (226-268)||(16270025-16270067)
chr1 (228-266)||(26879297-26879335)
chr1 (716-785)||(33247806-33247876)
chr1 (716-785)||(33267978-33268048)
chr1 (226-268)||(46141813-46141855)
chr1 (226-272)||(47586237-47586283)
chr1 (225-286)||(15047295-15047356)
chr1 (225-266)||(20353934-20353975)
chr1 (225-286)||(23359348-23359409)
chr1 (213-270)||(26606827-26606884)
chr1 (229-342)||(29434930-29435043)
chr1 (225-266)||(29622423-29622464)
chr1 (225-286)||(35258871-35258932)
chr1 (229-266)||(38119614-38119651)
chr1 (225-286)||(50617216-50617279)
chr1 (219-298)||(29261415-29261494)
chr1 (225-268)||(29424411-29424454)
chr1 (226-281)||(29438020-29438075)
chr1 (221-268)||(41459206-41459253)
chr1 (221-268)||(50037265-50037312)
chr1 (226-272)||(6437539-6437585)
chr1 (226-268)||(13761044-13761086)
chr1 (222-268)||(22345291-22345337)
chr1 (111-157)||(26445741-26445787)
chr1 (226-272)||(46341675-46341721)
chr1 (226-268)||(47585628-47585670)
chr1 (219-268)||(585682-585731)
chr1 (226-271)||(1167590-1167635)
chr1 (229-266)||(11197429-11197466)
chr1 (230-271)||(13147524-13147565)
chr1 (225-266)||(18609894-18609935)
chr1 (226-267)||(18975120-18975161)
chr1 (225-266)||(19928810-19928851)
chr1 (245-298)||(30910022-30910075)
chr1 (229-266)||(38127493-38127530)
chr1 (225-266)||(47652727-47652768)
chr1 (219-268)||(47653700-47653749)
chr1 (216-268)||(49502811-49502864)
chr1 (225-266)||(50117845-50117886)
chr1 (227-268)||(51271592-51271633)
[»] chr8 (65 HSPs)
chr8 (107-342)||(21406224-21406468)
chr8 (107-342)||(21800716-21800960)
chr8 (107-193)||(44726609-44726695)
chr8 (107-186)||(38135487-38135566)
chr8 (107-268)||(44727384-44727547)
chr8 (225-297)||(26451482-26451554)
chr8 (225-281)||(40077249-40077305)
chr8 (222-336)||(41855331-41855445)
chr8 (225-298)||(34823015-34823088)
chr8 (226-298)||(18438635-18438707)
chr8 (225-329)||(35962277-35962381)
chr8 (135-193)||(38134476-38134534)
chr8 (225-322)||(1114720-1114817)
chr8 (223-324)||(22577640-22577741)
chr8 (135-298)||(21835102-21835251)
chr8 (225-269)||(41016444-41016488)
chr8 (225-268)||(22550864-22550907)
chr8 (225-268)||(39601735-39601778)
chr8 (224-286)||(28646245-28646307)
chr8 (224-286)||(28650829-28650891)
chr8 (225-271)||(34892808-34892854)
chr8 (226-268)||(40039157-40039199)
chr8 (225-267)||(42602492-42602534)
chr8 (226-312)||(42605234-42605320)
chr8 (225-266)||(184551-184592)
chr8 (225-266)||(7344556-7344597)
chr8 (225-266)||(8419437-8419478)
chr8 (225-266)||(15030917-15030958)
chr8 (225-278)||(15033146-15033199)
chr8 (223-268)||(18205817-18205862)
chr8 (225-266)||(26663032-26663073)
chr8 (225-266)||(32375684-32375725)
chr8 (226-306)||(3641639-3641719)
chr8 (246-298)||(41276880-41276932)
chr8 (247-342)||(43188030-43188126)
chr8 (226-297)||(40039684-40039755)
chr8 (225-268)||(40740937-40740980)
chr8 (225-268)||(43262452-43262495)
chr8 (226-268)||(2146957-2146999)
chr8 (222-268)||(7168119-7168165)
chr8 (225-271)||(13782263-13782309)
chr8 (226-268)||(32383205-32383247)
chr8 (226-268)||(32437160-32437202)
chr8 (226-268)||(34366942-34366984)
chr8 (228-266)||(36677931-36677969)
chr8 (228-286)||(38872932-38872990)
chr8 (225-266)||(483849-483890)
chr8 (225-266)||(17924282-17924323)
chr8 (225-266)||(22014279-22014320)
chr8 (225-266)||(22519561-22519602)
chr8 (225-266)||(45066360-45066401)
chr8 (230-322)||(35966753-35966845)
chr8 (230-266)||(39491141-39491177)
chr8 (221-305)||(39939210-39939294)
chr8 (225-268)||(7121785-7121828)
chr8 (225-264)||(18441440-18441479)
chr8 (225-276)||(41250071-41250122)
chr8 (223-266)||(41274625-41274668)
chr8 (229-263)||(546424-546458)
chr8 (230-268)||(13783112-13783150)
chr8 (219-268)||(914748-914797)
chr8 (229-266)||(1056204-1056241)
chr8 (225-298)||(5332585-5332658)
chr8 (231-268)||(28694109-28694146)
chr8 (222-263)||(42731861-42731902)
[»] scaffold0012 (3 HSPs)
scaffold0012 (139-286)||(232741-232892)
scaffold0012 (107-193)||(232636-232722)
scaffold0012 (247-335)||(232512-232600)
[»] chr6 (53 HSPs)
chr6 (107-268)||(9048965-9049126)
chr6 (107-193)||(32222641-32222727)
chr6 (107-278)||(32223394-32223565)
chr6 (107-193)||(9048199-9048285)
chr6 (107-185)||(35242029-35242107)
chr6 (225-286)||(31768766-31768827)
chr6 (225-278)||(22305129-22305182)
chr6 (228-285)||(32643523-32643580)
chr6 (208-268)||(9048106-9048166)
chr6 (225-268)||(6204858-6204901)
chr6 (225-268)||(11691825-11691868)
chr6 (225-276)||(11840249-11840300)
chr6 (225-276)||(13388707-13388758)
chr6 (221-268)||(23958921-23958968)
chr6 (222-268)||(18606075-18606121)
chr6 (217-266)||(26351086-26351136)
chr6 (225-286)||(8193208-8193269)
chr6 (225-266)||(13382662-13382703)
chr6 (225-266)||(26712081-26712122)
chr6 (225-266)||(28249918-28249959)
chr6 (226-266)||(18351643-18351683)
chr6 (223-298)||(16192770-16192845)
chr6 (225-268)||(29076322-29076365)
chr6 (225-268)||(29109855-29109898)
chr6 (225-268)||(29111295-29111338)
chr6 (222-268)||(17338760-17338806)
chr6 (225-266)||(6207059-6207100)
chr6 (225-266)||(11694026-11694067)
chr6 (225-266)||(17597523-17597564)
chr6 (241-298)||(18001215-18001271)
chr6 (225-266)||(27616748-27616789)
chr6 (229-286)||(28362734-28362791)
chr6 (225-286)||(31146386-31146447)
chr6 (225-282)||(31771740-31771797)
chr6 (222-286)||(13616253-13616317)
chr6 (230-266)||(24721962-24721998)
chr6 (226-266)||(26712223-26712263)
chr6 (213-264)||(3177588-3177639)
chr6 (227-266)||(26423011-26423050)
chr6 (221-260)||(26712179-26712218)
chr6 (225-276)||(29068265-29068316)
chr6 (225-276)||(29083512-29083563)
chr6 (245-336)||(35021282-35021373)
chr6 (229-267)||(2051060-2051098)
chr6 (226-268)||(13404632-13404674)
chr6 (225-263)||(15546388-15546426)
chr6 (222-268)||(15888796-15888842)
chr6 (226-268)||(30258315-30258357)
chr6 (208-278)||(32222550-32222620)
chr6 (226-264)||(35096673-35096711)
chr6 (221-266)||(3380803-3380848)
chr6 (225-262)||(14011754-14011791)
chr6 (231-268)||(17596972-17597009)
[»] chr3 (112 HSPs)
chr3 (107-193)||(54964797-54964883)
chr3 (107-193)||(33471575-33471661)
chr3 (225-336)||(34691588-34691699)
chr3 (222-305)||(29929420-29929503)
chr3 (222-305)||(29978574-29978657)
chr3 (224-298)||(42756160-42756234)
chr3 (221-298)||(48250864-48250941)
chr3 (225-309)||(2743388-2743472)
chr3 (226-322)||(41579724-41579820)
chr3 (225-287)||(4002504-4002566)
chr3 (214-312)||(19341582-19341680)
chr3 (225-283)||(20918010-20918068)
chr3 (225-283)||(20926972-20927030)
chr3 (228-286)||(48888753-48888811)
chr3 (226-296)||(49268845-49268915)
chr3 (225-278)||(2647698-2647751)
chr3 (225-298)||(34694433-34694506)
chr3 (233-298)||(46344938-46345003)
chr3 (217-264)||(4015119-4015167)
chr3 (225-277)||(43476214-43476266)
chr3 (225-277)||(44227134-44227186)
chr3 (225-329)||(49609353-49609457)
chr3 (225-268)||(34049111-34049154)
chr3 (225-268)||(36134354-36134397)
chr3 (225-268)||(41803029-41803072)
chr3 (225-268)||(54389826-54389869)
chr3 (222-268)||(14043894-14043940)
chr3 (226-268)||(19440287-19440329)
chr3 (222-268)||(29918337-29918383)
chr3 (222-268)||(29967490-29967536)
chr3 (224-286)||(30256001-30256063)
chr3 (225-266)||(1293410-1293451)
chr3 (226-271)||(1294077-1294122)
chr3 (225-266)||(3953214-3953255)
chr3 (225-286)||(6489342-6489403)
chr3 (225-266)||(8156541-8156582)
chr3 (225-298)||(24700722-24700795)
chr3 (225-266)||(30943222-30943263)
chr3 (225-266)||(35743581-35743622)
chr3 (225-266)||(41844363-41844404)
chr3 (225-266)||(46697744-46697785)
chr3 (225-266)||(50477213-50477254)
chr3 (250-322)||(45101872-45101944)
chr3 (225-268)||(4004802-4004845)
chr3 (225-268)||(6143702-6143745)
chr3 (216-266)||(8475859-8475910)
chr3 (213-268)||(10492860-10492915)
chr3 (225-268)||(16484455-16484498)
chr3 (223-322)||(28611097-28611196)
chr3 (225-268)||(43478829-43478872)
chr3 (229-268)||(46989578-46989617)
chr3 (225-268)||(48246443-48246486)
chr3 (225-268)||(49140846-49140889)
chr3 (231-286)||(49219796-49219851)
chr3 (225-312)||(52570565-52570652)
chr3 (225-268)||(55385168-55385211)
chr3 (222-268)||(2062417-2062463)
chr3 (228-266)||(3501897-3501935)
chr3 (247-329)||(7843038-7843120)
chr3 (222-268)||(11270280-11270326)
chr3 (226-268)||(13896876-13896918)
chr3 (226-268)||(50604420-50604462)
chr3 (225-266)||(600543-600584)
chr3 (225-266)||(2950399-2950440)
chr3 (225-266)||(6745325-6745366)
chr3 (225-286)||(9429848-9429909)
chr3 (226-271)||(34645590-34645635)
chr3 (227-268)||(34712760-34712801)
chr3 (221-262)||(36134270-36134311)
chr3 (213-266)||(40877760-40877813)
chr3 (225-266)||(42165196-42165237)
chr3 (227-264)||(42760210-42760247)
chr3 (225-266)||(46406590-46406631)
chr3 (225-266)||(49138647-49138688)
chr3 (225-266)||(49144455-49144496)
chr3 (225-342)||(49196448-49196565)
chr3 (225-282)||(51402397-51402454)
chr3 (225-266)||(54392027-54392068)
chr3 (226-322)||(2432943-2433039)
chr3 (212-268)||(30839147-30839202)
chr3 (225-277)||(36812859-36812911)
chr3 (225-268)||(2271312-2271355)
chr3 (225-260)||(2271395-2271430)
chr3 (225-268)||(7941141-7941184)
chr3 (221-300)||(9582546-9582625)
chr3 (227-286)||(11380454-11380513)
chr3 (225-268)||(14398566-14398609)
chr3 (225-268)||(20485530-20485573)
chr3 (227-266)||(41612399-41612438)
chr3 (221-276)||(47070491-47070546)
chr3 (229-264)||(48566403-48566438)
chr3 (250-324)||(2745229-2745303)
chr3 (221-259)||(6928685-6928723)
chr3 (230-268)||(7247864-7247902)
chr3 (226-276)||(24703415-24703465)
chr3 (229-267)||(34712265-34712303)
chr3 (220-266)||(41844182-41844228)
chr3 (225-266)||(2645489-2645530)
chr3 (225-266)||(2647762-2647803)
chr3 (225-266)||(2967924-2967965)
chr3 (225-266)||(3493622-3493663)
chr3 (225-266)||(3497316-3497357)
chr3 (225-266)||(4008322-4008363)
chr3 (219-268)||(27738636-27738685)
chr3 (225-270)||(32592246-32592291)
chr3 (225-266)||(34051312-34051353)
chr3 (225-266)||(42166409-42166450)
chr3 (231-268)||(45507402-45507439)
chr3 (220-265)||(47443529-47443574)
chr3 (225-282)||(49217112-49217169)
chr3 (231-268)||(49265823-49265860)
chr3 (214-267)||(55176336-55176389)
[»] chr4 (83 HSPs)
chr4 (135-286)||(17342155-17342307)
chr4 (107-187)||(19994164-19994244)
chr4 (107-267)||(17343287-17343443)
chr4 (107-298)||(9473539-9473733)
chr4 (107-187)||(9472973-9473053)
chr4 (229-342)||(8109348-8109461)
chr4 (225-322)||(9889971-9890068)
chr4 (135-193)||(19993161-19993220)
chr4 (226-297)||(33383807-33383878)
chr4 (225-298)||(15995723-15995796)
chr4 (225-298)||(19069188-19069261)
chr4 (225-286)||(55407792-55407853)
chr4 (226-298)||(955793-955865)
chr4 (221-276)||(37022056-37022111)
chr4 (225-286)||(1041948-1042009)
chr4 (226-335)||(11494508-11494616)
chr4 (225-278)||(55793941-55793994)
chr4 (225-282)||(56138269-56138326)
chr4 (226-322)||(29700302-29700398)
chr4 (226-322)||(37959720-37959816)
chr4 (225-268)||(6178109-6178152)
chr4 (225-268)||(21022887-21022930)
chr4 (226-297)||(34151616-34151687)
chr4 (225-324)||(41023361-41023460)
chr4 (224-283)||(48256566-48256625)
chr4 (225-268)||(49094115-49094158)
chr4 (225-267)||(958593-958635)
chr4 (226-268)||(39590568-39590610)
chr4 (230-300)||(49572904-49572974)
chr4 (226-300)||(51426536-51426610)
chr4 (221-266)||(28234449-28234494)
chr4 (225-266)||(30726740-30726781)
chr4 (225-266)||(31425317-31425358)
chr4 (225-266)||(37563279-37563320)
chr4 (225-266)||(39773437-39773478)
chr4 (225-266)||(40358279-40358320)
chr4 (221-266)||(49563873-49563918)
chr4 (225-266)||(54634014-54634055)
chr4 (226-278)||(21018004-21018056)
chr4 (222-270)||(21470932-21470980)
chr4 (225-268)||(15999798-15999841)
chr4 (225-268)||(16984160-16984203)
chr4 (229-268)||(20208541-20208580)
chr4 (225-264)||(26932619-26932658)
chr4 (225-268)||(41795355-41795398)
chr4 (245-312)||(50278817-50278884)
chr4 (225-268)||(51492102-51492145)
chr4 (226-268)||(19073655-19073697)
chr4 (226-268)||(33409554-33409596)
chr4 (226-268)||(33410229-33410271)
chr4 (217-266)||(56565790-56565840)
chr4 (225-266)||(1089583-1089624)
chr4 (226-267)||(4783678-4783719)
chr4 (225-266)||(11084006-11084047)
chr4 (225-266)||(21018067-21018108)
chr4 (219-268)||(38368259-38368308)
chr4 (249-286)||(39588105-39588142)
chr4 (225-266)||(40354638-40354679)
chr4 (225-266)||(41793397-41793438)
chr4 (225-266)||(49169096-49169137)
chr4 (225-265)||(67626-67666)
chr4 (204-268)||(20209306-20209369)
chr4 (226-265)||(16983556-16983595)
chr4 (225-268)||(18884503-18884546)
chr4 (209-268)||(34503740-34503799)
chr4 (225-268)||(38460457-38460500)
chr4 (225-268)||(43176627-43176670)
chr4 (225-268)||(44051091-44051134)
chr4 (225-268)||(44561329-44561372)
chr4 (227-266)||(44680077-44680116)
chr4 (231-266)||(52529246-52529281)
chr4 (225-271)||(9655908-9655954)
chr4 (225-267)||(21015771-21015813)
chr4 (226-268)||(26791680-26791722)
chr4 (228-266)||(26792246-26792284)
chr4 (228-266)||(37015931-37015969)
chr4 (226-268)||(41933622-41933664)
chr4 (225-266)||(6175910-6175951)
chr4 (229-266)||(9013872-9013909)
chr4 (219-268)||(23221663-23221712)
chr4 (225-262)||(37563102-37563139)
chr4 (225-266)||(41800936-41800977)
chr4 (225-262)||(49096317-49096354)
[»] chr2 (76 HSPs)
chr2 (109-268)||(43258613-43258775)
chr2 (110-193)||(42176134-42176217)
chr2 (111-186)||(43257837-43257913)
chr2 (225-300)||(29397909-29397984)
chr2 (135-193)||(42177117-42177175)
chr2 (225-322)||(27276373-27276470)
chr2 (225-309)||(3795327-3795411)
chr2 (225-336)||(24512130-24512241)
chr2 (221-286)||(25964824-25964889)
chr2 (226-322)||(45137433-45137529)
chr2 (230-297)||(30271076-30271143)
chr2 (226-343)||(8268749-8268866)
chr2 (221-282)||(34639309-34639370)
chr2 (225-277)||(17424154-17424206)
chr2 (225-268)||(3937851-3937894)
chr2 (225-268)||(25184829-25184872)
chr2 (225-268)||(43982230-43982273)
chr2 (226-268)||(23409501-23409543)
chr2 (225-283)||(30273149-30273207)
chr2 (225-283)||(41500233-41500291)
chr2 (222-267)||(19187219-19187264)
chr2 (225-266)||(22003400-22003441)
chr2 (221-342)||(23786081-23786202)
chr2 (225-266)||(28468674-28468715)
chr2 (223-268)||(34921756-34921801)
chr2 (228-268)||(28477069-28477109)
chr2 (225-265)||(43536136-43536176)
chr2 (225-268)||(3943191-3943234)
chr2 (225-264)||(5351731-5351770)
chr2 (225-268)||(7189950-7189993)
chr2 (225-268)||(7263048-7263091)
chr2 (223-298)||(12908426-12908501)
chr2 (225-268)||(14456533-14456576)
chr2 (225-268)||(23346811-23346854)
chr2 (225-268)||(33222647-33222690)
chr2 (225-268)||(41183223-41183266)
chr2 (223-322)||(45475417-45475516)
chr2 (222-268)||(2271733-2271779)
chr2 (226-268)||(40221130-40221172)
chr2 (222-268)||(41008924-41008970)
chr2 (227-268)||(2983431-2983472)
chr2 (225-266)||(3935896-3935937)
chr2 (246-295)||(16583589-16583638)
chr2 (225-266)||(18000265-18000306)
chr2 (225-286)||(24754023-24754084)
chr2 (225-270)||(29093827-29093872)
chr2 (225-266)||(39798476-39798517)
chr2 (225-266)||(42499819-42499860)
chr2 (225-266)||(44100797-44100838)
chr2 (221-261)||(10825256-10825296)
chr2 (226-266)||(41565351-41565391)
chr2 (226-266)||(43984301-43984341)
chr2 (225-268)||(23347327-23347370)
chr2 (225-264)||(30493394-30493433)
chr2 (225-268)||(31974246-31974289)
chr2 (213-268)||(38779604-38779659)
chr2 (221-276)||(39489206-39489261)
chr2 (225-268)||(43943720-43943763)
chr2 (226-268)||(4286701-4286743)
chr2 (226-268)||(26543989-26544031)
chr2 (225-267)||(28138612-28138654)
chr2 (226-268)||(29407003-29407045)
chr2 (226-268)||(35493341-35493383)
chr2 (232-266)||(41564498-41564532)
chr2 (226-268)||(43618604-43618646)
chr2 (225-266)||(7267443-7267484)
chr2 (225-266)||(17420601-17420642)
chr2 (225-266)||(17426364-17426405)
chr2 (229-278)||(28139559-28139608)
chr2 (225-282)||(32956342-32956399)
chr2 (231-264)||(35490741-35490774)
chr2 (245-298)||(36255732-36255785)
chr2 (229-266)||(39947632-39947669)
chr2 (231-268)||(41497503-41497540)
chr2 (223-268)||(43491140-43491185)
chr2 (226-342)||(43950244-43950357)
[»] chr7 (63 HSPs)
chr7 (107-193)||(40142536-40142622)
chr7 (107-193)||(42024965-42025051)
chr7 (109-193)||(42024399-42024483)
chr7 (225-322)||(42499386-42499483)
chr7 (107-186)||(7611631-7611713)
chr7 (219-322)||(10705225-10705328)
chr7 (225-338)||(30355238-30355351)
chr7 (225-298)||(34742394-34742467)
chr7 (225-342)||(47776289-47776406)
chr7 (222-298)||(47060928-47061003)
chr7 (225-276)||(17840889-17840940)
chr7 (225-287)||(40587673-40587735)
chr7 (225-286)||(9494805-9494866)
chr7 (229-306)||(36392118-36392195)
chr7 (225-342)||(37340259-37340376)
chr7 (225-266)||(41884125-41884166)
chr7 (225-268)||(9367723-9367766)
chr7 (225-272)||(35606816-35606863)
chr7 (223-270)||(36781446-36781493)
chr7 (135-186)||(40141534-40141585)
chr7 (232-306)||(34622492-34622566)
chr7 (220-266)||(42795107-42795153)
chr7 (225-266)||(15070388-15070429)
chr7 (225-266)||(18105406-18105447)
chr7 (225-286)||(34738377-34738438)
chr7 (225-266)||(45767860-45767901)
chr7 (230-306)||(29592536-29592612)
chr7 (204-268)||(38555392-38555455)
chr7 (225-268)||(10098116-10098159)
chr7 (247-342)||(27453615-27453710)
chr7 (213-268)||(29112404-29112459)
chr7 (247-322)||(29593349-29593424)
chr7 (225-268)||(42682025-42682068)
chr7 (225-271)||(19044321-19044367)
chr7 (225-271)||(20710269-20710315)
chr7 (245-286)||(5537885-5537926)
chr7 (225-266)||(9365712-9365753)
chr7 (225-266)||(10098399-10098440)
chr7 (225-266)||(15074227-15074268)
chr7 (225-266)||(17834520-17834561)
chr7 (225-266)||(30791007-30791048)
chr7 (204-268)||(14412344-14412407)
chr7 (247-335)||(39460517-39460605)
chr7 (233-297)||(41049196-41049260)
chr7 (226-298)||(46860512-46860584)
chr7 (226-278)||(48590339-48590391)
chr7 (227-266)||(5541546-5541585)
chr7 (213-260)||(7953721-7953768)
chr7 (225-268)||(13645341-13645384)
chr7 (225-268)||(14102347-14102390)
chr7 (225-267)||(28980171-28980214)
chr7 (225-264)||(41047812-41047851)
chr7 (232-286)||(34623386-34623440)
chr7 (225-271)||(36394937-36394983)
chr7 (210-268)||(38265476-38265533)
chr7 (213-267)||(40142648-40142702)
chr7 (230-268)||(46596916-46596954)
chr7 (225-266)||(7975608-7975649)
chr7 (229-266)||(11629764-11629801)
chr7 (229-266)||(16674802-16674839)
chr7 (229-266)||(17649170-17649207)
chr7 (225-266)||(20564106-20564147)
chr7 (229-266)||(37345106-37345143)
[»] scaffold1500 (1 HSPs)
scaffold1500 (135-193)||(662-720)
[»] scaffold0494 (3 HSPs)
scaffold0494 (225-322)||(808-905)
scaffold0494 (225-266)||(5364-5405)
scaffold0494 (225-264)||(892-931)
[»] scaffold0341 (1 HSPs)
scaffold0341 (225-322)||(17350-17447)
[»] scaffold0618 (1 HSPs)
scaffold0618 (233-312)||(3872-3951)
[»] scaffold1379 (1 HSPs)
scaffold1379 (225-342)||(433-550)
[»] scaffold0360 (1 HSPs)
scaffold0360 (223-304)||(7301-7382)
[»] scaffold0744 (1 HSPs)
scaffold0744 (225-266)||(422-463)
[»] scaffold0340 (1 HSPs)
scaffold0340 (225-262)||(1180-1217)
[»] scaffold0201 (1 HSPs)
scaffold0201 (225-286)||(22416-22477)
[»] scaffold0180 (1 HSPs)
scaffold0180 (221-266)||(15617-15662)
[»] scaffold0101 (2 HSPs)
scaffold0101 (225-278)||(36533-36586)
scaffold0101 (225-266)||(41021-41062)
[»] scaffold0038 (1 HSPs)
scaffold0038 (225-266)||(50080-50121)
[»] scaffold0794 (1 HSPs)
scaffold0794 (225-268)||(5302-5345)
[»] scaffold0199 (2 HSPs)
scaffold0199 (225-268)||(12387-12430)
scaffold0199 (225-266)||(10685-10726)
[»] scaffold0184 (2 HSPs)
scaffold0184 (221-276)||(18288-18343)
scaffold0184 (231-306)||(18024-18099)
[»] scaffold0116 (1 HSPs)
scaffold0116 (225-268)||(15954-15997)
[»] scaffold0078 (2 HSPs)
scaffold0078 (221-276)||(54501-54556)
scaffold0078 (231-306)||(54745-54820)
[»] scaffold0293 (1 HSPs)
scaffold0293 (225-266)||(721-762)
[»] scaffold0014 (1 HSPs)
scaffold0014 (225-266)||(84613-84654)
[»] scaffold0011 (1 HSPs)
scaffold0011 (229-265)||(235933-235969)
[»] scaffold0092 (1 HSPs)
scaffold0092 (225-268)||(54596-54639)
[»] scaffold0065 (1 HSPs)
scaffold0065 (225-268)||(65349-65392)
[»] scaffold0504 (1 HSPs)
scaffold0504 (217-262)||(12419-12465)
[»] scaffold0634 (1 HSPs)
scaffold0634 (225-266)||(7451-7492)
[»] scaffold0388 (1 HSPs)
scaffold0388 (225-282)||(13908-13965)
[»] scaffold0361 (1 HSPs)
scaffold0361 (225-322)||(4399-4496)


Alignment Details
Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 576 - 814
Target Start/End: Complemental strand, 14628300 - 14628063
Alignment:
Q  576 catttcttttcaatactgtataacaacttttacataaactgctaccaattaatataaatattgtataacaaccgacttctattgagtaatctctggagaa 675  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14628300 catttcttttcaatactgtatatcaacttttacataaactggtaccaattaatataaatattgtataacaac-gacttctattgagtaatctctggagaa 14628202  T
Q  676 ttgctttcaataagagatagagcacagatttacaaacttttacagaaaggaatattgtgcaggaactaggaattgcaggtcacgtatccaccgagtcttt 775  Q
    |||||||| || |||||||||||||| |||||||||   || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14628201 ttgctttcgatcagagatagagcacatatttacaaaaaatttcagaaaggaatatagtgcaggaactaggaattgcaggtcacgtatccaccgagtcttt 14628102  T
Q  776 gagagcttggttctctcccacccaattaaccacctgata 814  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14628101 gagagcttggttctctcccacccaattaaccacttgata 14628063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 107 - 342
Target Start/End: Complemental strand, 17966043 - 17965806
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaa 206  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |         ||    
T  17966043 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattaaaatcaataaatattaataatgataatataagatttttgtaaaaaaaaaaa 17965944  T
Q  207 t--ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagg 304  Q
       |||| ||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | |||    
T  17965943 aaattaaggtttgaagtttcctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgagg 17965844  T
Q  305 ggataaaattgtattttattaatgtttctcagtcttat 342  Q
    ||||||||| |||||||| || || ||||||| |||||    
T  17965843 ggataaaatcgtattttactagtgattctcagccttat 17965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 444 - 563
Target Start/End: Complemental strand, 14628464 - 14628345
Alignment:
Q  444 gaataattaaaacctaagtccatgttataccaaaaataaacatttctaacaaaagaatatctttggatgggctgtacgagaagaatcttaagtccattag 543  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14628464 gaataaataaatcctaagtccatgttataccaaaaataaacatttctaacaaaagaatatctttggatgggctgtacgagaagaatcttaagtccattag 14628365  T
Q  544 ttagaaaattgtttctcacg 563  Q
    ||||||||||||||||||||    
T  14628364 ttagaaaattgtttctcacg 14628345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 113 - 342
Target Start/End: Original strand, 17966773 - 17967002
Alignment:
Q  113 gattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaatttaaa 212  Q
    |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |          | ||||     
T  17966773 gattatgtttccttataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttgtaaaaaataataattaag 17966872  T
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaa 312  Q
    ||||||||||| ||| |||||||||| ||||| |||||||||| ||||||||||||||| |||||||||| |||  || ||||||| | ||||| |||||    
T  17966873 gtttgaagtttcctcagcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaa 17966972  T
Q  313 ttgtattttattaatgtttctcagtcttat 342  Q
    | |||||||| || |||||||||| |||||    
T  17966973 tcgtattttactagtgtttctcagccttat 17967002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 1396461 - 1396375
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1396461 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 1396375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 1397259 - 1397345
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1397259 agtgttgattatgtttccttataaaatcacaatgaattaaatattattagaatcaataaatattaataatgacaatataagattttt 1397345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 107 - 268
Target Start/End: Complemental strand, 25983559 - 25983400
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaa 206  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||| |         ||    
T  25983559 agtgttgattatttttcctcatagaatcacaatgaattaaatagtattaaaatcaataattattaataatgacaatttaaggtttttgtaaaaaaa--aa 25983462  T
Q  207 tttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
     |||| ||||||||||| ||||| |||||||| |||| ||||||||||| ||||||||||||    
T  25983461 attaaggtttgaagtttcctcggtagttaactaccgatgttttcctcggtagttaactgcag 25983400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 14629043 - 14628973
Alignment:
Q  12 catcatcatcaactcttaaaatctactgccgttgaatactgtcaaatttcataggcttcttcaatatttgt 82  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14629043 catcttcatcaactcttaaaatctactgccgttgaataccgtcaaatttcataggcttcttcaatatttgt 14628973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 33995147 - 33995244
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| ||||||||||||||||||||||| ||||  ||| |||| |||| |||  || ||||||||| |||||||||||||||||||||    
T  33995147 ctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaattgtatttta 33995244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 18307328 - 18307255
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||| ||| |||||||    
T  18307328 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacagttaactg 18307255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 18538332 - 18538431
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| ||  |||| |||||||| ||| ||||||| | |||||  ||||| ||||||||    
T  18538332 ttctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtatttta 18538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 226 - 305
Target Start/End: Complemental strand, 34682330 - 34682251
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggg 305  Q
    |||| |||||||| ||||||||||||||||||||||||||||| ||  |||| |||||||| ||| ||||||||||||||    
T  34682330 tcggtagttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaaggg 34682251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 39743154 - 39743228
Alignment:
Q  232 gttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||  || ||||||||| |||||    
T  39743154 gttaactgccgaggttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggg 39743228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 8702197 - 8702294
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||  ||||||||||||||  || ||||||||| ||||   ||||| ||||||||    
T  8702197 ctcgtcagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcgagggagcaaaatcgtatttta 8702294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 34123934 - 34124031
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || ||||  |||| ||| ||| ||||||| | |||||  ||||| ||||||||    
T  34123934 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtatttta 34124031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 38968169 - 38968108
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||||||||  |||||||||||||||||||||||||||| || |||||| |||||||    
T  38968169 ctcggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctc 38968108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 28387342 - 28387246
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||| |||||| ||||||||||| |||||||||| || | ||  ||||||||  || ||||||||| ||||| |||||| ||||||||    
T  28387342 tcggcagttaactaccgaggatttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaatcgtatttta 28387246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 34122598 - 34122494
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| || ||||  ||||||||  || ||||||| | | |||  ||||| |||||||| |    
T  34122598 ctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtattttact 34122499  T
Q  325 aatgt 329  Q
    |||||    
T  34122498 aatgt 34122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 230 - 322
Target Start/End: Complemental strand, 41201797 - 41201705
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||| ||||||||||||||||||||||||||||| ||  | || |||||||| ||| |||| |||| || ||| ||||| ||||||||    
T  41201797 cagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtatttta 41201705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 19037469 - 19037512
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  19037469 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 19037512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 25497587 - 25497524
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| | | |||| ||||||||    
T  25497587 ttctcggcagttaactaccgagattttcctcggcagttaactgcagccaatttttgaattcctc 25497524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 4204207 - 4204253
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  4204207 tttctcggcagttaactaccgaggttttcctcgacagttaactgcag 4204253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 28388519 - 28388561
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcag 28388561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 42539375 - 42539429
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    ||||||||||| || | |||||||||||||||||||||||| |||||||||||||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatt 42539429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 542789 - 542862
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| |||||  ||||||||||||||| |||||| || |||| ||||||||| ||| |||||||    
T  542789 ctcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacagttaactg 542862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 13837798 - 13837757
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13837798 ctcggcagttaactaccgaggttttcctcggcagttaactgc 13837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 25890068 - 25890007
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||| ||||  ||||||||    
T  25890068 ctcggcagtttactaccgaggttttcctcggtagttaactgcagtcggatttcaaattcctc 25890007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 28238213 - 28238172
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  28238213 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 30708977 - 30708924
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| || ||||||    
T  30708977 ctcggcagttaactcccgaggtttccctcggcagttaactgcagccggattttt 30708924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 41799770 - 41799847
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    ||||||||||||||| |||||| |||||||||||||||||    |||| |||||||||| || ||||||||| |||||    
T  41799770 gcagttaacttccgaagttttcatcggcagttaactgcagctagatttctaattcctcagcagttaactgtcgagggg 41799847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 5847 - 5799
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  5847 ggcagttaactaccgaggttttcctcggcaattaactgcagtcgtattt 5799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 1035258 - 1035158
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    ||||||||||||||  ||||| ||||||||| | |||||||||| |||| ||  ||||||||  || ||||||| | ||||| |||||| ||||||||||    
T  1035258 ctcggcagttaactatcgaggatttcctcggtaattaactgcagccgaaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttatt 1035159  T
Q  325 a 325  Q
    |    
T  1035158 a 1035158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 7757399 - 7757356
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  7757399 ctcggcagttaactagcgaggttttcctcggcagttaactgcag 7757356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 11346081 - 11346038
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  11346081 ctcgacagttaactaccgaggttttcctcggcagttaactgcag 11346038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 25984125 - 25984196
Alignment:
Q  122 tcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||  ||| ||||||||||||||| ||||| ||||||||||||| |||||||| ||| |||| |||||    
T  25984125 tcctcatggaatcacaatgaattaaataatattaaaatcaataaatatcaataatgataatttaaggttttt 25984196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 29430100 - 29430053
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  29430100 ttttctcggtagttaactgccgaggttttcctcggcacttaactgcag 29430053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 3603148 - 3603190
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcag 3603190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 13838424 - 13838466
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  13838424 tcggcagttaactgccgaggttttcctcggtagttaactgcag 13838466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 27660014 - 27659976
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaac 263  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27660014 ctcggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 38855713 - 38855751
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  38855713 ggcagttaactaccgaggttttcctcggcagttaactgc 38855751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 39742649 - 39742603
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    ||||| |||||||| | ||||||||||||||||||||||||||||||    
T  39742649 ctcggtagttaactgctgaggttttcctcggcagttaactgcagtcg 39742603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 306
Target Start/End: Complemental strand, 7017586 - 7017505
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    |||||||||||||| ||||||||||||| |  |||||||||||| || ||||  ||||||||| || |||||| || |||||    
T  7017586 ctcggcagttaactaccgaggttttccttgagagttaactgcagccggatttcaaattcctcagcagttaactatcgagggg 7017505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 8577048 - 8577007
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  8577048 ctcggcagttaactaccgaggttttcttcggcagttaactgc 8577007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 11029003 - 11029044
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  11029003 ctcggcagttaactcccgaggatttcctcggcagttaactgc 11029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 14280899 - 14280940
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  14280899 ctcggccgttaactaccgaggttttcctcggcagttaactgc 14280940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 19035312 - 19035271
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  19035312 ctcggcagttaactaccgaggttttcctcggcacttaactgc 19035271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 27532616 - 27532661
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtc 270  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||    
T  27532616 ctcggcagttaactgccgaggttttcctcgatagttaactgcagtc 27532661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 28876717 - 28876676
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  28876717 ctcggcagttaactgccgaggttttcctcgggagttaactgc 28876676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 41798892 - 41798819
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||| || ||||  ||||| ||| || |||||||    
T  41798892 ctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactg 41798819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 37814655 - 37814615
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  37814655 tcggcagttaactaccaaggttttcctcggcagttaactgc 37814615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 7762243 - 7762294
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||| | ||||||||||||| ||||||||||||  |||||||    
T  7762243 ctcggcagttaactcctgaggttttcctcgacagttaactgcaaccgaattt 7762294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 13707926 - 13707973
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||| |||||||| |||| ||||||||||| ||||||||||||    
T  13707926 ttttctcggtagttaactgccgatgttttcctcggtagttaactgcag 13707973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 20200148 - 20200191
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagt 269  Q
    ||||||||||||| | || |||||||||||||||||||||||||    
T  20200148 tcggcagttaactacagatgttttcctcggcagttaactgcagt 20200191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 25877695 - 25877652
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| |||||||||||||||||| |||||    
T  25877695 ctcggcagttaactaccgaagttttcctcggcagttaattgcag 25877652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 25897078 - 25897121
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||| |||||| |||||||||||||||    
T  25897078 ctcggcagttaactaccgaggatttcctgggcagttaactgcag 25897121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 29430577 - 29430620
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||    
T  29430577 ctcggtagttaactgccgaggttttcctcagcagttaactgcag 29430620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 30192566 - 30192523
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| |||||||||| |||||||||||||    
T  30192566 ctcggcagttaactgccgaagttttcctcgacagttaactgcag 30192523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 31787594 - 31787559
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagtt 260  Q
    |||||||||||||| |||||||||||||||||||||    
T  31787594 ctcggcagttaactaccgaggttttcctcggcagtt 31787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 35671156 - 35671113
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| || | ||||||||||||||||||||||||    
T  35671156 ctcggcagttaactgccaaagttttcctcggcagttaactgcag 35671113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 38408509 - 38408470
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  38408509 cggcagttaactcccgaggatttcctcggcagttaactgc 38408470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 41065962 - 41065911
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcga 272  Q
    ||||||||| ||||| || |||| ||||||||||| ||||||||||||||||    
T  41065962 ttttctcgggagttacctgccgaagttttcctcggaagttaactgcagtcga 41065911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 42098377 - 42098334
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| |||||||  |||||||||||||||||||||||||||||    
T  42098377 ctcggtagttaaccgccgaggttttcctcggcagttaactgcag 42098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 8046 - 8088
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||    
T  8046 ctcggtagttaactaccgagattttcctcggcagttaactgca 8088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 19041116 - 19041157
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  19041116 ctcggcagttaactaccgaggttttcttcggcagctaactgc 19041157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 20192427 - 20192354
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||||| ||||||  ||| |||||||||||||||||||||||| ||| | || ||||| ||| || |||||||    
T  20192427 ctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcagttaactg 20192354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 27662284 - 27662243
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| |||||| ||||||||    
T  27662284 ctcggcagttaactaccgaggttttcttcggcaattaactgc 27662243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 28880396 - 28880343
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||| | |||||||||||||||||||||  |||||| || ||||||    
T  28880396 ctcggcagttaattaccgaggttttcctcggcagtttgctgcagccggattttt 28880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 267
Target Start/End: Original strand, 30354400 - 30354437
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  30354400 cagttaactaccgaggttttcctcgacagttaactgca 30354437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 30705168 - 30705205
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  30705168 cggcagttaactaccgaggatttcctcggcagttaact 30705205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 30708872 - 30708913
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||||  |||||||||| |||||||||||||||    
T  30708872 ctcggcagttaactatcgaggttttcttcggcagttaactgc 30708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 33993356 - 33993315
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||||| |||||||||| | ||||||||||||    
T  33993356 ttctcggcagttaactaccgaggtttttcacggcagttaact 33993315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 35926433 - 35926396
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactg 265  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  35926433 ggcagttaactaccgaggttttcctcggtagttaactg 35926396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 36503106 - 36503143
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  36503106 gcagttaactaccgaggtttttctcggcagttaactgc 36503143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 5e-46; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 107 - 342
Target Start/End: Original strand, 48751285 - 48751526
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt------atnnnnn 200  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||      ||         
T  48751285 agtgttgattatgtttcctcttaaaatcacaatgaattaaatagtattagaatcaataaatattaataatgataatataaggtttttgtaaaaataaaat 48751384  T
Q  201 nnntaatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtc 300  Q
        || |||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| || ||||||||||||||  || || | || |    
T  48751385 aaaaaaattaaggtttgaagtttcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgcc 48751484  T
Q  301 aaggggataaaattgtattttattaatgtttctcagtcttat 342  Q
     ||||| |||||| |||||||| || |||||||||| |||||    
T  48751485 gagggggtaaaatcgtattttactagtgtttctcagccttat 48751526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 107 - 342
Target Start/End: Original strand, 51289837 - 51290076
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt----atnnnnnnn 202  Q
    |||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||    |            
T  51289837 agtgttgattatgttttctcataaaatcacaataaattaaatagtattagaatcaataaatattaatagtgacaatataaggtttttgtaaaaaaaataa 51289936  T
Q  203 ntaatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaa 302  Q
     ||| |||| |||| ||||||  ||||||| ||||| ||||||||||||||||||||||||||||  || |||||||||||||||  | ||||||| | |    
T  51289937 ataaattaaggtttaaagtttcatcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccga 51290036  T
Q  303 ggggataaaattgtattttattaatgtttctcagtcttat 342  Q
    |||| ||||||  ||||||| || |||||||||| |||||    
T  51290037 gggggtaaaatcttattttactagtgtttctcagccttat 51290076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 46217195 - 46217370
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt----atnnnnnnn 202  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    |            
T  46217195 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagttttttgtaaaaaaaaata 46217294  T
Q  203 ntaatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
      || |||| ||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||| ||| |||||    
T  46217295 aaaaattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccgatttttt 46217370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 107 - 278
Target Start/End: Complemental strand, 46216593 - 46216419
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatc-aataaatattaataatgacaatataagatttttatnnnnnnnnta 205  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||  ||||| |        ||    
T  46216593 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaaataaacattaataatgacaatataatttttttgtgaaaaaaata 46216494  T
Q  206 at--ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    ||  |||| ||||||||||| |||||||||||||| |||| ||||||||||  |||||||||||| ||| |||||    
T  46216493 ataattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcgatagttaactgcagccgatttttt 46216419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 29425212 - 29425377
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatc-aataaatattaataatgacaatataagatttttatnnnnnnnnta 205  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |         |    
T  29425212 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaaataaatattaataatgacaatataatttttttgtgaaaaataaa 29425311  T
Q  206 at----ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||    |||| ||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||    
T  29425312 ataaaattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaactgca 29425377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 107 - 268
Target Start/End: Complemental strand, 46043704 - 46043537
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaa 206  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |         ||    
T  46043704 agtgttgattatgtttcctcataaaatcacaatgaattaaataatattagaatcaataaatattaataatgacaatataaggtttttttaaaataaaaaa 46043605  T
Q  207 t------ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |      |||| ||||||||||| |||||||||||||| |||| ||||||||||| |||||| |||||    
T  46043604 taaaaaattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaattgcag 46043537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 29424580 - 29424494
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  29424580 agtgttgattatgtttcctcataaaatcacaatgaattaaataatattagaatcaataaatattaataatgacaatataagtttttt 29424494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 51289062 - 51288976
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  51289062 agtgttgattatgtttccttataaaatcacaatgaattaattagtattagaatcaataaatattaataatgacaatataagattttt 51288976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 110 - 298
Target Start/End: Original strand, 45943608 - 45943798
Alignment:
Q  110 gttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttt--tatnnnnnnnntaat 207  Q
    ||||||||| ||||||| || ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||  ||          ||     
T  45943608 gttgattatgtttcctcgtagaatcacaatgaattaaatagtattaaaatcaataaatattaataatgacaatttaaggtttttgtaaaaaaataaaaaa 45943707  T
Q  208 ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||| ||||||||||| |||||||||||||| |||| ||||||||||| |||||||| ||| ||  || | |||||||| ||| |||||||    
T  45943708 ttaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaactacagccggtttatgaattcctcgacaattaactg 45943798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 107 - 186
Target Start/End: Complemental strand, 48749959 - 48749880
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataa 186  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  48749959 agtgttgattatgtttcctcataaaatcacaatgaattaaataatattagaatcaataaatattaataatgacaaaataa 48749880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 3940149 - 3940063
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaa-tgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  3940149 agtgttgattatgtttcctcataaaatcacaaatgaattaaatagtattaaaa-caataaatattaataatgacaatataagattttt 3940063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 44336327 - 44336250
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||| |||||||    
T  44336327 ttttctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactg 44336250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 225 - 305
Target Start/End: Complemental strand, 11183260 - 11183180
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggg 305  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| || ||||||||||||||    
T  11183260 ctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaaggg 11183180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 135 - 268
Target Start/End: Original strand, 3941053 - 3941192
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaatttaaa------gtttgaagttttctcg 228  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |        |||  ||||      ||||||||||| ||||    
T  3941053 acaattaattaaattgtattagaatcaataaatattaataatgacaatataaggtttttgtaaaaaaaataaaataaaataaaggtttgaagtttcctcg 3941152  T
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||| |||| ||||||||||| ||||||||||||    
T  3941153 gcagttaactaccgaagttttcctcggtagttaactgcag 3941192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 46044649 - 46044713
Alignment:
Q  129 aaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  46044649 aaaatcacaatgaattaattagtattagaatcaataaatattagtaatgacaatataaggttttt 46044713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 6557993 - 6557928
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||  ||||||||    
T  6557993 ttttctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctc 6557928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 6562160 - 6562257
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| |||||| |||||||||||||||||||||| || ||||  ||||||||  || ||||||| | ||||| |||||| ||||||||    
T  6562160 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 6562257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 229 - 342
Target Start/End: Original strand, 23276111 - 23276224
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatg 328  Q
    ||||||||||  ||||||||||||||||||||||||| || || ||||||||||||||| || ||||||| | |||||  ||||  |||||||| |  ||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtg 23276210  T
Q  329 tttctcagtcttat 342  Q
    |||||||| |||||    
T  23276211 tttctcagccttat 23276224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 19499108 - 19499191
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggg 305  Q
    |||||| |||||||||  | ||||||||||||||||||||||||||| |||||||| |||| |||| || ||||||||| ||||    
T  19499108 tttctctgcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcgaggg 19499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 36072449 - 36072386
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||    
T  36072449 agttttttcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatt 36072386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 471091 - 471136
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  471091 ttttctcggcagttaactcccgaggttttcctcggcagttaactgc 471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 13636121 - 13636174
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  13636121 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttt 13636174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 44470010 - 44470071
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||    
T  44470010 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctc 44470071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 40057659 - 40057727
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgt 299  Q
    |||||||| |||| | |||||||||||||||||| ||||||| |||| |||||||||||| ||||||||    
T  40057659 agttaactgccgaagctttcctcggcagttaactacagtcgatttttaaattcctcaacaattaactgt 40057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 41804037 - 41804093
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctc 41804093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 52802203 - 52802143
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctc 52802143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 7981136 - 7981195
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||    
T  7981136 ttctcggcggttaactaccgaggttttcctcggcagttaattgcagccgattttttaatt 7981195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 222 - 277
Target Start/End: Original strand, 19054246 - 19054301
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttt 277  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||| ||| ||||    
T  19054246 tttctcggcagttaactaccgaggttttccttggcagttaactgcagccgattttt 19054301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 19161966 - 19161923
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  19161966 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 19161923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 46973279 - 46973181
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| ||  |||| ||||||||  || ||||||| |||||||  ||||| ||||||||    
T  46973279 ttctcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtatttta 46973181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 50113385 - 50113303
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaag 303  Q
    |||||||||||||||||| ||||| |||||||||||| |||||| ||| |||| ||  ||||||||| || ||||||| ||||    
T  50113385 ttttctcggcagttaactaccgagattttcctcggcaattaactacagccgaaattcaaattcctcaccaattaactgccaag 50113303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 3728809 - 3728768
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  3728809 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 3944048 - 3944007
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  3944048 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 3993842 - 3993883
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  3993842 ctcggcagttaactaccgaggttttcctcggcagttaactgc 3993883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 8548668 - 8548709
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  8548668 ctcggcagttaactaccgaggttttcctcggcagttaactgc 8548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 9711650 - 9711691
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  9711650 ctcggcagttaactcccgaggttttcctcggcagttaactgc 9711691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 19159697 - 19159644
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || ||||||    
T  19159697 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggattttt 19159644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 22524204 - 22524159
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
T  22524204 ttttctcggcagttaactaccgaggttttcctcgggagttaactgc 22524159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 26633600 - 26633559
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgca 26633559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 38690005 - 38689909
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| ||  |||  |||||||| ||||||||||  | ||||| |||||  ||||||||    
T  38690005 ctcggcagttaactaccgaggttttccttggcagttaactgcagccg-gtttcgaattcctcgacatttaactaccgagggggtaaaagcgtatttta 38689909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 38771703 - 38771662
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  38771703 ctcggcagttaactcccgaggttttcctcggcagttaactgc 38771662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 1656088 - 1656148
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcct 285  Q
    |||||||||||||| |||||||||| |||| ||||||||||||| ||| |||| |||||||    
T  1656088 ctcggcagttaactaccgaggtttttctcgacagttaactgcaggcgatttttgaattcct 1656148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 9710652 - 9710596
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaat 281  Q
    |||||||||||||| |||| |||||||||||||||||||||||| || |||| ||||    
T  9710652 ctcggcagttaactcccgaagttttcctcggcagttaactgcagccggatttctaat 9710596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 342
Target Start/End: Original strand, 21944376 - 21944496
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttt 321  Q
    |||||||| ||||||||  |||||||||||||||||  ||||||||| ||  |||| |||| ||| ||| ||| || || |||||||||||  |||||||    
T  21944376 tttctcggtagttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtatttt 21944475  T
Q  322 attaatgtttctcagtcttat 342  Q
    ||| |||| || ||| |||||    
T  21944476 atttatgtgtcccagccttat 21944496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 5077993 - 5077918
Alignment:
Q  247 tttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||||||||||||||| ||||  |||| |||| || ||||||| | ||||| |||||| ||||||||    
T  5077993 tttcctcggcagttaactgcagtcggatttcaaatttctcagcagttaactgccgagggggtaaaatcgtatttta 5077918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 13173911 - 13173813
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||||| || |||||||||||||| ||||||||||| ||  |||| |||||| || || ||||||| | |||||  ||||| ||||||||    
T  13173911 ttctcggcagttaactgccaaggttttcctcggctgttaactgcagccggtttttgaattcc-cagcagttaactgccgagggggcaaaatagtatttta 13173813  T

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Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 13178127 - 13178174
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  13178127 ttttctcggcagttaactctcgaggttttcctcagcagttaactgcag 13178174  T

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Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 15051349 - 15051388
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  15051349 cggcagttaactaccgaggttttcctcggcagttaactgc 15051388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 31783714 - 31783753
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  31783714 ctcggcagttaactcccgaggttttcctcggcagttaact 31783753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 36076555 - 36076618
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||| |||  |||||||||||||||||||||||||||| ||  |||| ||||||||    
T  36076555 ttctcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctc 36076618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 44598905 - 44598948
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  44598905 ctcggcagttaactcccgaagttttcctcggcagttaactgcag 44598948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 8460093 - 8460139
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  8460093 tttctcggcagttaactaccgagattttccttggcagttaactgcag 8460139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 13633942 - 13633904
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  13633942 tcggcagttaactaccgaggttttcctcggcagttaact 13633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 16270025 - 16270067
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  16270025 tcggcagttaactgccgaggttttcttcggcagttaactgcag 16270067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 26879297 - 26879335
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  26879297 ggcagttaactaccgaggttttcctcggcagttaactgc 26879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 716 - 785
Target Start/End: Original strand, 33247806 - 33247876
Alignment:
Q  716 tacagaaaggaatattgtgcaggaactaggaattgc-aggtcacgtatccaccgagtctttgagagcttgg 785  Q
    |||||||||||| ||||||||||||||||||||||| || |||||  || ||| ||||||||||| |||||    
T  33247806 tacagaaaggaacattgtgcaggaactaggaattgcaagatcacggttctaccaagtctttgagaacttgg 33247876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 716 - 785
Target Start/End: Original strand, 33267978 - 33268048
Alignment:
Q  716 tacagaaaggaatattgtgcaggaactaggaattgc-aggtcacgtatccaccgagtctttgagagcttgg 785  Q
    |||||||||||| ||||||||||||||||||||||| || |||||  || ||| ||||||||||| |||||    
T  33267978 tacagaaaggaacattgtgcaggaactaggaattgcaagatcacggttctaccaagtctttgagaacttgg 33268048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 46141855 - 46141813
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  46141855 tcggcagttaactaccgatgttttcctcggcagttaactgcag 46141813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 47586237 - 47586283
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcga 272  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  47586237 tcggcagttaactgccgaggtttttctcggtagttaactgcagtcga 47586283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 15047356 - 15047295
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| ||||||  ||||||||||||||||||||| || ||||  ||||||||    
T  15047356 ctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctc 15047295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 20353934 - 20353975
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  20353934 ctcggcagttaactaccgaagttttcctcggcagttaactgc 20353975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 23359348 - 23359409
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||| ||| |||||||||||||||| |||||||||||| || ||||  ||||||||    
T  23359348 ctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctc 23359409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 26606884 - 26606827
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtc 270  Q
    |||||| |||| |||||||||||||| |||| ||||||||||| ||||||||| ||||    
T  26606884 gtttgaggtttcctcggcagttaactgccgaagttttcctcggtagttaactgtagtc 26606827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 342
Target Start/End: Complemental strand, 29435043 - 29434930
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatg 328  Q
    |||||||||| |||||||| || |||| |||||||||||||||  | || ||||| || | | ||||||| |||| || |||||  ||||||||||  ||    
T  29435043 gcagttaactaccgaggttgtcatcggaagttaactgcagtcggttattgaattcttcgaaagttaactgccaagagggtaaaaacgtattttattcgtg 29434944  T
Q  329 tttctcagtcttat 342  Q
    | ||||||||||||    
T  29434943 tgtctcagtcttat 29434930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 29622423 - 29622464
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  29622423 ctcggcagttaactaccgaggttttcctcggcaattaactgc 29622464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 35258871 - 35258932
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||   |||||||||||||||  ||||||||||| || ||||||||||||||    
T  35258871 ctcggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctc 35258932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 38119614 - 38119651
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| |||||||||||||||||||||||||||    
T  38119614 gcagttaactaccgaggttttcctcggcagttaactgc 38119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 50617279 - 50617216
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg--aatttttaattcctc 286  Q
    |||||||||||||| ||||||||||||| | ||||||||||||| ||  ||||| |||||||||    
T  50617279 ctcggcagttaactcccgaggttttccttgacagttaactgcagccggaaatttctaattcctc 50617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 29261494 - 29261415
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||| ||||||||| | ||||||||| ||||||||||| ||||| ||| |||  |||| ||| ||| |||||||    
T  29261494 agttttctcgacagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttctctacagttaactg 29261415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 29424454 - 29424411
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||    
T  29424454 ctcggcagttaactaccgaagttttcctcggtagttaactgcag 29424411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 29438020 - 29438075
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaat 281  Q
    ||||||||||| | |||||||||||||||| |||||||||||| ||  ||||||||    
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaat 29438075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 41459206 - 41459253
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||| | ||||||||| |||||||||||||||| ||||||||||||    
T  41459206 ttttctggacagttaactgccgaggttttcctcggtagttaactgcag 41459253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 50037265 - 50037312
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| |||| |||||||| |||||||||||||||| ||||||||||||    
T  50037265 ttttttcggtagttaactgccgaggttttcctcggtagttaactgcag 50037312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 6437539 - 6437585
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcga 272  Q
    ||||||| ||||| ||||||||||||| || ||||||||||||||||    
T  6437539 tcggcagataactaccgaggttttccttggtagttaactgcagtcga 6437585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 13761044 - 13761086
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||  ||| ||||||||||||||||||||||||    
T  13761044 tcggcagttaactgtcgaagttttcctcggcagttaactgcag 13761086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 22345337 - 22345291
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| |||||| |||  |||||||||||||||||    
T  22345337 tttctcggcagttaactaccgaggattttttcggcagttaactgcag 22345291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 26445787 - 26445741
Alignment:
Q  111 ttgattatatttcctcataaaattacaatgaattaaatagtattaga 157  Q
    |||||||| ||| |||||| ||| |||||||||||||||||||||||    
T  26445787 ttgattatgttttctcatagaatcacaatgaattaaatagtattaga 26445741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 46341721 - 46341675
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcga 272  Q
    |||||| |||||| |||| ||||||||||| ||||||||||||||||    
T  46341721 tcggcacttaactgccgaagttttcctcggtagttaactgcagtcga 46341675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 47585670 - 47585628
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  47585670 tcggaagttaactgccgaggttttcctcggtagttaactgcag 47585628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 585731 - 585682
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||||||||||||    
T  585731 agtttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 585682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 1167635 - 1167590
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||| |||||||| |||||||||||||||  |||||||||||||||    
T  1167635 tcggtagttaactgccgaggttttcctcgatagttaactgcagtcg 1167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 11197466 - 11197429
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  11197466 gcagttaactcccgagattttcctcggcagttaactgc 11197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 13147565 - 13147524
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||||||||  ||||||||||||||| |||||||||||||||    
T  13147565 cagttaactgtcgaggttttcctcggtagttaactgcagtcg 13147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 18609894 - 18609935
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||| ||||||||||| ||||||||||    
T  18609894 ctcggcagttaactgccgaagttttcctcggtagttaactgc 18609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 18975120 - 18975161
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||||||||||| |||| ||||||||| |||||||||||||    
T  18975120 tcggcagttaactaccgaagttttcctctgcagttaactgca 18975161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 19928810 - 19928851
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||| ||||||| ||||||||    
T  19928810 ctcggcagttaactaccgaggttttactcggcacttaactgc 19928851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 30910022 - 30910075
Alignment:
Q  245 gttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||||||||||||| || ||||  |||||||| ||| |||||||    
T  30910022 gttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactg 30910075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 38127530 - 38127493
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  38127530 gcagttaactaccgaagttttcctcggcagttaactgc 38127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 47652768 - 47652727
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||| |||||||| |||| ||||||||||||||||||||||    
T  47652768 ctcgggagttaactgccgaagttttcctcggcagttaactgc 47652727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 47653700 - 47653749
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||||||||||||    
T  47653700 agtttcctcggtagtttactgccgaagttttcctcggcagttaactgcag 47653749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 49502811 - 49502864
Alignment:
Q  216 tgaagttttc-tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||| |||| |||||||| |||| ||||||||||| ||||||||||||    
T  49502811 tgaagttttcctcggtagttaactgccgaagttttcctcggtagttaactgcag 49502864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 50117845 - 50117886
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||| |||||| ||||| |||||||||||||||||||||    
T  50117845 ctcggcatttaactaccgagattttcctcggcagttaactgc 50117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 51271592 - 51271633
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||  |||||||||||||||||| ||||||||||    
T  51271592 cggcagttaaccaccgaggttttcctcggcaattaactgcag 51271633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 3e-35; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 107 - 342
Target Start/End: Complemental strand, 21406468 - 21406224
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttt---------tatnn 197  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         ||       
T  21406468 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataaggtttttgtaaaaaataaaa 21406369  T
Q  198 nnnnnntaatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
           || |||| ||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||| ||  || | ||||||||  || ||||||    
T  21406368 ataaaaaaaattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21406269  T
Q  298 gtcaaggggataaaattgtattttattaatgtttctcagtcttat 342  Q
    |   ||||||||   | |||||||| || ||||||||||||||||    
T  21406268 gcagaggggatattttggtattttactagtgtttctcagtcttat 21406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 107 - 342
Target Start/End: Complemental strand, 21800960 - 21800716
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttt---------tatnn 197  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         ||       
T  21800960 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataaggtttttgtaaaaaataaaa 21800861  T
Q  198 nnnnnntaatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
           || |||| ||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||| ||  || | ||||||||  || ||||||    
T  21800860 ataaaaaaaattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaact 21800761  T
Q  298 gtcaaggggataaaattgtattttattaatgtttctcagtcttat 342  Q
    |   ||||||||   | |||||||| || ||||||||||||||||    
T  21800760 gcagaggggatattttggtattttactagtgtttctcagtcttat 21800716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 44726695 - 44726609
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44726695 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagtttttt 44726609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 38135487 - 38135566
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataa 186  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  38135487 agtgttgattatgtttcctcataaaatcacaatcaattaaatagtattaaaatcgataaatattaataatgacaatataa 38135566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 107 - 268
Target Start/End: Original strand, 44727384 - 44727547
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatc-aataaatattaataatgacaatataagatttttat-nnnnnnnnt 204  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||| |||||||||||||||  ||||| |              
T  44727384 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattataatcaaataaatattcataatgacaatataatttttttgtgaaaaaaaaa 44727483  T
Q  205 aatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    || |||| ||||||||||| ||||  |||||||| |||| ||||||||||| ||||||||||||    
T  44727484 aaattaaggtttgaagtttcctcgaaagttaactaccgaagttttcctcggtagttaactgcag 44727547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 225 - 297
Target Start/End: Complemental strand, 26451554 - 26451482
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||| || ||||||    
T  26451554 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttctaattcctcagcagttaact 26451482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 40077249 - 40077305
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaat 281  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  40077249 ctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaat 40077305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 222 - 336
Target Start/End: Complemental strand, 41855445 - 41855331
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttt 321  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||| ||||| || ||| ||||||| | ||| |  ||||  |||||||    
T  41855445 tttctcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtatttt 41855346  T
Q  322 attaatgtttctcag 336  Q
    | | |||||||||||    
T  41855345 actcatgtttctcag 41855331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 34823015 - 34823088
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| ||||||||||||||| || |||||||||| || |||||||||||||| ||| |||||||    
T  34823015 ctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactg 34823088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 18438707 - 18438635
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||  | || |||||||||||| |||||||    
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactg 18438635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 35962381 - 35962277
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| |||||||||||||||||||||||||| || || ||||  |||||||| ||| ||||||| | || ||  ||||| |||||||| |    
T  35962381 ctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtattttact 35962282  T
Q  325 aatgt 329  Q
    |||||    
T  35962281 aatgt 35962277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 38134534 - 38134476
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  38134534 acaatgaattacatagtattagaatcaataaatattagtaacgacaatataaggttttt 38134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 1114817 - 1114720
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| |||||| |||||||||||||||||||||| || ||||  |||| |||  || ||||||| | ||||| |||||| ||||||||    
T  1114817 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtatttta 1114720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 22577741 - 22577640
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||  | | |||| ||||||||| || ||||||| | |||| | ||||  ||||||||    
T  22577741 ttctcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtatttta 22577642  T
Q  323 tt 324  Q
    ||    
T  22577641 tt 22577640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 135 - 298
Target Start/End: Original strand, 21835102 - 21835251
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaatttaaagtttgaagttttctcggcagtt 234  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| |||| ||               || |||| ||||| ||||| ||||||||||    
T  21835102 acaatgaattatatagtattagaatcaataaatattagtaatgacaaaataaaat--------------aaaattaaggtttgtagtttcctcggcagtt 21835187  T
Q  235 aacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    || | |||| ||||||||||| |||||||||||| ||  || | |||||||| |||||||||||    
T  21835188 aaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaactg 21835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 41016488 - 41016444
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagt 269  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  41016488 ctcggcagttaactaccgaggttttcctcggcagttaactgcagt 41016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 22550864 - 22550907
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  22550864 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 22550907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 39601778 - 39601735
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  39601778 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 39601735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 28646245 - 28646307
Alignment:
Q  224 tctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||| |||||||| |||| |||||||||||||||||||||||| ||| |||| ||||||||    
T  28646245 tctcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctc 28646307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 28650829 - 28650891
Alignment:
Q  224 tctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||| |||||||| |||| |||||||||||||||||||||||| ||| |||| ||||||||    
T  28650829 tctcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctc 28650891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 34892808 - 34892854
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||    
T  34892808 ctcggcagttaactgccgaagttttcctcggcagttaactgcagtcg 34892854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 40039199 - 40039157
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  40039199 tcggcagttaacttccgaggttttcctcggtagttaactgcag 40039157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 42602534 - 42602492
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  42602534 ctcggcagttaactaccgaggttttcctcggcagttaactgca 42602492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Original strand, 42605234 - 42605320
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaa 312  Q
    ||||||||||||| |||| |||||| ||||||||||||||||| ||| |||| ||||| || ||| ||||||| | ||||| |||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaa 42605320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 184551 - 184592
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  184551 ctcggcagttaactaccgaggttttcctcggcagttaactgc 184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 7344556 - 7344597
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  7344556 ctcggcagttaactcccgaggttttcctcggcagttaactgc 7344597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 8419478 - 8419437
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  8419478 ctcggcagttaactaccgaggttttcctcggcagttaactgc 8419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 15030958 - 15030917
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  15030958 ctcggcagttaactcccgaggttttcctcggcagttaactgc 15030917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 15033146 - 15033199
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||    
T  15033146 ctcggcagttaactaccgaggtttccctcggcagttaattgcagccgaattttt 15033199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 18205862 - 18205817
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  18205862 ttctcggcagttaactaccgaggttttccttggcagttaactgcag 18205817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 26663032 - 26663073
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  26663032 ctcggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 32375725 - 32375684
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  32375725 ctcggcagttaactaccgaggttttcctcggcagttaactgc 32375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 306
Target Start/End: Complemental strand, 3641719 - 3641639
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    ||||||||||| | |||||||||||||| |||||||||||||| |||| || |||||| |||  | ||||||||| |||||    
T  3641719 tcggcagttaattcccgaggttttcctcagcagttaactgcagccgaagttctaattcatcagtaattaactgtcgagggg 3641639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 41276880 - 41276932
Alignment:
Q  246 ttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  41276880 tttttctcggcagttaactgcagccgaatttctaattcctcaacagttaactg 41276932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 247 - 342
Target Start/End: Complemental strand, 43188126 - 43188030
Alignment:
Q  247 tttcctcggcagttaactgc-agtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatgtttctcagtcttat 342  Q
    |||||||||||||||||| | || || |||||||||||||| ||| ||||||||| |||||  ||||| |||||||| |  |||||||||| |||||    
T  43188126 tttcctcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttat 43188030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 226 - 297
Target Start/End: Original strand, 40039684 - 40039755
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||| |||  | |||||| ||| ||||||    
T  40039684 tcggcagttaactatcgaggttttcctcggtagttaactgcagtcgattttggacttcctcgacagttaact 40039755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 40740980 - 40740937
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  40740980 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 40740937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 43262495 - 43262452
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  43262495 ctcggcagttaactaccgaagttttcctcggcagttaactgcag 43262452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 2146957 - 2146999
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  2146957 tcggcagttaactaccgaggttttcctcggcagtttactgcag 2146999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 7168165 - 7168119
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  7168165 tttctcggtagtcaactaccgaggttttcctcggcagttaactgcag 7168119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 13782309 - 13782263
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||||||||||||| |||| |||||||||||||||||| ||||||||    
T  13782309 ctcggcagttaactgccgaagttttcctcggcagttaattgcagtcg 13782263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 32383205 - 32383247
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  32383205 tcggcagttaactaccgaggttttcctcggtagttaactgcag 32383247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 32437160 - 32437202
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  32437160 tcggcagttaactaccgaggttttcctcggtagttaactgcag 32437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 34366984 - 34366942
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  34366984 tcggcagttaactaccgaggttttcctcggaagttaactgcag 34366942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 36677931 - 36677969
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  36677931 ggcagttaactaccgaggttttcctcggcagttaactgc 36677969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 38872932 - 38872990
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||  |||| ||||||||    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctc 38872990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 483890 - 483849
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  483890 ctcggcagttaactaccgaggttttcctcggcacttaactgc 483849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 17924282 - 17924323
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  17924282 ctcggcagttaactaccgaggtttttctcggcagttaactgc 17924323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 22014320 - 22014279
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  22014320 ctcggtagttaactaccgaggttttcctcggcagttaactgc 22014279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 22519561 - 22519602
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  22519561 ctcggcagttaactaccgaggttttcctcggcacttaactgc 22519602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 45066360 - 45066401
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||| | |||||||||||||||||||||||||||    
T  45066360 ctcggcagttaattaccgaggttttcctcggcagttaactgc 45066401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 35966753 - 35966845
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||| |||||| |||| ||| || ||||||||||||| ||||  ||||||||  || ||||||| | |||||  ||||||||||||||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaattgtatttta 35966845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 39491141 - 39491177
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39491141 cagttaacttccgagattttcctcggcagttaactgc 39491177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 221 - 305
Target Start/End: Original strand, 39939210 - 39939294
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggg 305  Q
    |||||| ||||||||||| || |||||||||| ||||||||||||||| || |||| |||  | || ||| ||||||||| ||||    
T  39939210 ttttctaggcagttaactacctaggttttccttggcagttaactgcagccggatttctaaaacttcgacaattaactgtcgaggg 39939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 7121785 - 7121828
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||    
T  7121785 ctcggcagttaactgccgaagttttcctcagcagttaactgcag 7121828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 18441440 - 18441479
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  18441440 ctcggcagttaactgccgaggtttttctcggcagttaact 18441479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 41250071 - 41250122
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||   ||||||||||||||||||| ||||||||||| ||||    
T  41250071 ctcggcagttaaccatcgaggttttcctcggcagtaaactgcagtcggattt 41250122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 41274668 - 41274625
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  41274668 ttctcggcagttaactaccgagattttcctcggcaattaactgc 41274625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 546424 - 546458
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaac 263  Q
    |||||||||| ||||||||||||||||||||||||    
T  546424 gcagttaactcccgaggttttcctcggcagttaac 546458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 13783112 - 13783150
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13783112 cagttaactgccgaagttttcctcggcagttaactgcag 13783150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 914797 - 914748
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||||||||||||    
T  914797 agtttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 914748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 1056204 - 1056241
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| || ||||||||||||||||||||||||    
T  1056204 gcagttaactcccaaggttttcctcggcagttaactgc 1056241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 5332585 - 5332658
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||| |||||||| |||| ||||||||||| | |||||||||| ||| |||| |||| ||| ||| |||||||    
T  5332585 ctcggtagttaactgccgaagttttcctcgggaattaactgcagccgatttttaaatttctcgacaattaactg 5332658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 28694146 - 28694109
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  28694146 agttaactggcgaggttttcctcggcagttaactgcag 28694109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 42731902 - 42731861
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaac 263  Q
    ||||||||||||||||| |||| ||||||||||||| |||||    
T  42731902 tttctcggcagttaactgccgaagttttcctcggcaattaac 42731861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 75; Significance: 4e-34; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 139 - 286
Target Start/End: Original strand, 232741 - 232892
Alignment:
Q  139 tgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnnt----aatttaaagtttgaagttttctcggcagtt 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |             || |||| ||||||||||| ||||||||||    
T  232741 tgaattaaatagtattagaatcaataaatattaataatgacaatataaggtttttgtaaaaaaaaataaaaaattaaggtttgaagtttcctcggcagtt 232840  T
Q  235 aacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  232841 aactaccgaggttttcctcggcagttaattgcagccgaatttttaattcctc 232892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 232722 - 232636
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  232722 agtgttgattatgtttcatcttaaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataaggttttt 232636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 232600 - 232512
Alignment:
Q  247 tttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatgtttctca 335  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| ||||||| | |||||||||||| |||||||| || | |||||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgtattttactagtctttctca 232512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 4e-34; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 107 - 268
Target Start/End: Original strand, 9048965 - 9049126
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatc-aataaatattaataatgacaatataagatttttatnnnnnnnnta 205  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |         |    
T  9048965 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaaataaatattaataatgacaatataatttttttgtgaaaaaaaaa 9049064  T
Q  206 atttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    | |||| |||||||| || |||||||||||||| |||| ||||||||||| ||||||||||||    
T  9049065 aattaaggtttgaag-ttcctcggcagttaactaccgaagttttcctcggtagttaactgcag 9049126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 32222727 - 32222641
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32222727 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagtttttt 32222641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 107 - 278
Target Start/End: Original strand, 32223394 - 32223565
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatc-aataaatattaataatgacaatataagatttttatnnnnnnnnta 205  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||| |         |    
T  32223394 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaaataaataataataatgacaatataatttttttgtgaaaaaaa-a 32223492  T
Q  206 atttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    | |||| ||||||||||| |||||||||||||| |||| |||||||||||  ||||||||||| ||| |||||    
T  32223493 aattaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtggttaactgcagccgatttttt 32223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 9048285 - 9048199
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  9048285 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgataatataagtttttt 9048199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 35242107 - 35242029
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatata 185  Q
    |||||||||||| |||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  35242107 agtgttgattatgtttcttcgtaaaatcacaatgagttaaatagtattagaatcaataaatattaataatgacaatata 35242029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 31768827 - 31768766
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| |||||||||||||||||| |||||||||| || ||||||||||||||    
T  31768827 ctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctc 31768766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 22305182 - 22305129
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  22305182 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttt 22305129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Original strand, 32643523 - 32643580
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcct 285  Q
    ||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||||    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattcct 32643580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 9048166 - 9048106
Alignment:
Q  208 ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| ||||||||||| |||||||||||||| |||| ||||||||||| ||||||||||||    
T  9048166 ttaaggtttgaagtttcctcggcagttaactaccgaagttttcctcggtagttaactgcag 9048106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 6204901 - 6204858
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  6204901 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 6204858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 11691868 - 11691825
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  11691868 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 11691825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 11840249 - 11840300
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  11840249 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaattt 11840300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 13388707 - 13388758
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  13388707 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaattt 13388758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 23958968 - 23958921
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  23958968 ttttctcggcagttaactaccgaggttttcctcggcatttaactgcag 23958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 18606121 - 18606075
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||    
T  18606121 tttctcggcagttaagtaccgaggttttcctcggcagttaactgcag 18606075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 26351086 - 26351136
Alignment:
Q  217 gaagttttc-tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  26351086 gaagttttcctcggcagttaactcccgaggttttcctcggcagttaactgc 26351136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 8193208 - 8193269
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||  |||||||||||||    
T  8193208 ctcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctc 8193269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 13382703 - 13382662
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  13382703 ctcggcagttaactaccgaggttttcctcggcagttaactgc 13382662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 26712122 - 26712081
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  26712122 ctcggcagttaactaccgaggttttcctcggcagttaactgc 26712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 28249959 - 28249918
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  28249959 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 18351643 - 18351683
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 223 - 298
Target Start/End: Complemental strand, 16192845 - 16192770
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||||| |||||| |||||||| || |||||||||| ||| |||| |||| ||| ||| |||||||    
T  16192845 ttctcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactg 16192770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 29076322 - 29076365
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  29076322 ctcggcagttaactaccgaggttttcctcagcagttaactgcag 29076365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 29109855 - 29109898
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  29109855 ctcggcagttaactaccgaggttttcctcagcagttaactgcag 29109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 29111295 - 29111338
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||| ||||||||||||||    
T  29111295 ctcggcagttaactaccgaggttttcctcagcagttaactgcag 29111338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 17338760 - 17338806
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||    
T  17338760 tttctcggcagttaattgccgaagttttcctcggcagttaactgcag 17338806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 6207059 - 6207100
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  6207059 ctcggcagttaactaccgaggttttcctcggcacttaactgc 6207100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 11694026 - 11694067
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  11694026 ctcggcagttaactaccgaggttttcctcggcaattaactgc 11694067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 17597523 - 17597564
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  17597523 ctcggcagttaactcccgaagttttcctcggcagttaactgc 17597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 18001271 - 18001215
Alignment:
Q  241 cgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||| ||||||||||||||||| ||  ||||||||||||||||| |||||||    
T  18001271 cgaggttttcttcggcagttaactgcagccg-gtttttaattcctcaacagttaactg 18001215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 27616789 - 27616748
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  27616789 ctcggcagttaactaccgaggttttcttcggcagttaactgc 27616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 286
Target Start/End: Original strand, 28362734 - 28362791
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||||  |||||||||||||||||||||||||||| || ||||  ||||||||    
T  28362734 gcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctc 28362791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 31146447 - 31146386
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| |||| |||||||||| ||||||||||||| || ||||  ||||||||    
T  31146447 ctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctc 31146386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 31771740 - 31771797
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    ||||||| |||||| ||||| ||||||||||||||||||||||| || |||| |||||    
T  31771740 ctcggcaattaactaccgagattttcctcggcagttaactgcagccggatttctaatt 31771797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 13616317 - 13616253
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||| ||||||||| |||| |||||| |  |||||||||||||||||  |||||||||||||    
T  13616317 tttctcgacagttaactaccgaagttttctttagcagttaactgcagtcggttttttaattcctc 13616253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 230 - 266
Target Start/End: Original strand, 24721962 - 24721998
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||| |||||||||||||||||||||||||||    
T  24721962 cagttaactaccgaggttttcctcggcagttaactgc 24721998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 26712223 - 26712263
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  26712223 tcggtagttaactaccgaggttttcctcggcagttaactgc 26712263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 3177639 - 3177588
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||| ||||||||    
T  3177639 gtttgaagtttcctcggcacttaactgccgaagttttcctcgggagttaact 3177588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 26423011 - 26423050
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  26423011 cggcagttaacttccgaggatttccttggcagttaactgc 26423050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 26712179 - 26712218
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagtt 260  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  26712179 ttttctcggcagttaactaccgaggttttcttcggcagtt 26712218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 29068265 - 29068316
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||| ||||| |||| ||| ||| ||||||||||||||||||    
T  29068265 ctcggcagttaactaccgagatttttctcagcaattaactgcagtcgaattt 29068316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 29083512 - 29083563
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||| ||||| |||| ||| ||| ||||||||||||||||||    
T  29083512 ctcggcagttaactaccgagatttttctcagcaattaactgcagtcgaattt 29083563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 35021282 - 35021373
Alignment:
Q  245 gttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatgtttctcag 336  Q
    |||||||||||||||||||||||| ||  |||| ||||| ||  |||||||||| | |||||  |||| ||||||||| |  ||||||||||    
T  35021282 gttttcctcggcagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtattttactcgtgtttctcag 35021373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 2051098 - 2051060
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  2051098 gcagataactaccgaggttttcctcggcagttaactgca 2051060  T

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Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 13404632 - 13404674
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| || ||||||||| ||||||||||||||||    
T  13404632 tcggcagttaactaccaaggttttccacggcagttaactgcag 13404674  T

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Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 15546388 - 15546426
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaac 263  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  15546388 ctcggcagttaactgccgaagttttcctcggcagttaac 15546426  T

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Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 15888796 - 15888842
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| |||| |||  ||||||||||||||||||||||||    
T  15888796 tttctcggcagtaaactaccgcagttttcctcggcagttaactgcag 15888842  T

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Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 30258315 - 30258357
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||    
T  30258315 tcggcagttaactgccgagattttcctcgacagttaactgcag 30258357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 208 - 278
Target Start/End: Complemental strand, 32222620 - 32222550
Alignment:
Q  208 ttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||| ||||||||||| |||||  ||||||| |||| ||||||||| | |||||||||||| ||| |||||    
T  32222620 ttaaggtttgaagtttcctcggttgttaactaccgaagttttcctcagtagttaactgcagccgatttttt 32222550  T

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Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 35096711 - 35096673
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  35096711 tcggcagttaactgccgaagttttcctcggcagttaact 35096673  T

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Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 3380848 - 3380803
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||| ||||||||  ||||||||||||||| ||||||||||    
T  3380848 ttttctcggtagttaactgtcgaggttttcctcggtagttaactgc 3380803  T

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Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 14011791 - 14011754
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaa 262  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  14011791 ctcggtagttaactgccgaggttttcctcggcagttaa 14011754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 17597009 - 17596972
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  17597009 agttaactgccgagattttcctcggcagttaactgcag 17596972  T

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Target: chr3 (Bit Score: 75; Significance: 4e-34; HSPs: 112)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 54964797 - 54964883
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54964797 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataaggttttt 54964883  T

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Target: chr3; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 33471661 - 33471575
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||| ||| |||| |||||    
T  33471661 agtgttgattatgtttcctcatagaatcacaatgaattaaataatattaaaatcaataaatattaataatgataatttaaggttttt 33471575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 225 - 336
Target Start/End: Complemental strand, 34691699 - 34691588
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| || ||||||| ||||||  || ||||||| | ||| |  |||||||||||||| |    
T  34691699 ctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgaggaggcaaaattgtattttact 34691600  T
Q  325 aatgtttctcag 336  Q
    | ||||||||||    
T  34691599 agtgtttctcag 34691588  T

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Target: chr3; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 29929503 - 29929420
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggg 305  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||| ||  |||| |||||||||||| ||||||||| ||||    
T  29929503 tttctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgaggg 29929420  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 29978657 - 29978574
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggg 305  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||| ||  |||| |||||||||||| ||||||||| ||||    
T  29978657 tttctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgaggg 29978574  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 42756234 - 42756160
Alignment:
Q  224 tctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||||  |||||||||||||||||||||||||||  || |||||||||||||| ||| |||||||    
T  42756234 tctcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactg 42756160  T

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Target: chr3; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 48250864 - 48250941
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || | ||  ||||||||| || |||||||    
T  48250864 ttttctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactg 48250941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 2743472 - 2743388
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggata 309  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||  || ||||||| | ||||||||    
T  2743472 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggata 2743388  T

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Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 41579724 - 41579820
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||  | || ||||||||| || ||||||| | |||||  ||||| ||||||||    
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtatttta 41579820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 4002504 - 4002566
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctca 287  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||  |||||||||    
T  4002504 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctca 4002566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 312
Target Start/End: Original strand, 19341582 - 19341680
Alignment:
Q  214 tttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaa 312  Q
    ||||| |||| |||||||||||||| |||| ||||||||||| |||||||||||| || |||| |||||||||  || ||||||| | |||||| ||||    
T  19341582 tttgaggtttcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaa 19341680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 20918010 - 20918068
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattc 283  Q
    |||||||||||||| |||||||||||||||||||||||||| || || |||||||||||    
T  20918010 ctcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattc 20918068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 20926972 - 20927030
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattc 283  Q
    |||||||||||||| |||||||||||||||||||||||||| || || |||||||||||    
T  20926972 ctcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattc 20927030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 48888811 - 48888753
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctc 48888753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 49268845 - 49268915
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaac 296  Q
    ||||||||||||| |||| |||||||||||||||||||||||  || |||||||||||||| ||| |||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaac 49268915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 2647698 - 2647751
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  2647698 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttt 2647751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 34694433 - 34694506
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| |||||||||| |||||||||| ||||||| || |||| ||||||||| ||| |||||||    
T  34694433 ctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacagttaactg 34694506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 298
Target Start/End: Complemental strand, 46345003 - 46344938
Alignment:
Q  233 ttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||| |||||||| ||| |||||||    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactg 46344938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 217 - 264
Target Start/End: Original strand, 4015119 - 4015167
Alignment:
Q  217 gaagttttc-tcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4015119 gaagttttcctcggcagttaacttccgaggttttcctcggcagttaact 4015167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 43476266 - 43476214
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttt 277  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||    
T  43476266 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttt 43476214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 44227186 - 44227134
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttt 277  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  44227186 ctcggcagttaactaccgaggttttcctcggcagttaactccagccgaatttt 44227134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 49609457 - 49609353
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| |||||||||| |||| || |||||||| | |||||||  |||||||| ||| |||||| || | ||   ||||||||||||||||    
T  49609457 ctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttcaaattcctcgacaattaactatcgaaggagcaaaattgtattttatt 49609358  T
Q  325 aatgt 329  Q
    |||||    
T  49609357 aatgt 49609353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 34049154 - 34049111
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  34049154 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 34049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 36134397 - 36134354
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  36134397 ctcggcagttaactcccgaggttttcctcggcagttaactgcag 36134354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 41803072 - 41803029
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  41803072 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 41803029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 54389869 - 54389826
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  54389869 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 54389826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 14043894 - 14043940
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  14043894 tttctcggcagttaactgccgaagttttcctcggcagttaactgcag 14043940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 19440329 - 19440287
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcag 19440287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 29918337 - 29918383
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  29918337 tttctcggcagttaactaacgaggttttcctcggcagttaactgcag 29918383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 29967490 - 29967536
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||    
T  29967490 tttctcggcagttaactaacgaggttttcctcggcagttaactgcag 29967536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Original strand, 30256001 - 30256063
Alignment:
Q  224 tctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||| ||||||||||  |||||||||||||||||||||||||||| ||  |||||||||||||    
T  30256001 tctcagcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctc 30256063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 1293451 - 1293410
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  1293451 ctcggcagttaactcccgaggttttcctcggcagttaactgc 1293410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 1294077 - 1294122
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||    
T  1294077 tcggcagttaactgccgaggttttcctcggaagttaactgcagtcg 1294122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 3953214 - 3953255
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  3953214 ctcggcagttaactcccgaggttttcctcggcagttaactgc 3953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 6489403 - 6489342
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||  || ||||||||||    
T  6489403 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctc 6489342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 8156582 - 8156541
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  8156582 ctcggcagttaactgccgaggttttcctcggcagttaactgc 8156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 24700795 - 24700722
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| |||||| ||||||||| |||||||||||  || |||| ||||||||| ||| |||||||    
T  24700795 ctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactg 24700722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 30943263 - 30943222
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  30943263 ctcggcagttaactaccgaggttttcctcggcagttaactgc 30943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 35743581 - 35743622
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  35743581 ctcggcagttaactaccgaggttttcctcggcagttaactgc 35743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 41844363 - 41844404
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  41844363 ctcggcagttaactaccgaggttttcctcggcagttaactgc 41844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 46697785 - 46697744
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  46697785 ctcggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 50477254 - 50477213
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  50477254 ctcggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 250 - 322
Target Start/End: Original strand, 45101872 - 45101944
Alignment:
Q  250 cctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||||||||| ||  |||| |||||||||||| ||||||| | |||||||||||  ||||||||    
T  45101872 cctcggcagttaactgcagccggtttttgaattcctcaacaattaactgccgaggggataaaaacgtatttta 45101944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 4004802 - 4004845
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| | |||||||||||||||||||||||||||||    
T  4004802 ctcggcagttaagtaccgaggttttcctcggcagttaactgcag 4004845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 6143745 - 6143702
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  6143745 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 6143702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 8475910 - 8475859
Alignment:
Q  216 tgaagttttc-tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  8475910 tgaagttttcctcagcagttaactaccgaggttttcctcggcagttaactgc 8475859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 10492860 - 10492915
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||| |||| |||||||||||||| |||| |||||||||||||||||| |||||    
T  10492860 gtttgaggtttcctcggcagttaactgccgaagttttcctcggcagttaattgcag 10492915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 16484455 - 16484498
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  16484455 ctcggcagttaactcccgaagttttcctcggcagttaactgcag 16484498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 28611097 - 28611196
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||||| |||  |||||||||||||||||||||||| ||  |||| |||| |||  || ||||||| | |||||  |||||| |||||||    
T  28611097 ttctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatatttta 28611196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 43478829 - 43478872
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  43478829 ctcggcagttaactaccgaagttttcctcggcagttaactgcag 43478872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 46989617 - 46989578
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcag 46989578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 48246486 - 48246443
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||||||||||||| |||||||||||||    
T  48246486 ctcggcagttaactaccgaggttttcctcgacagttaactgcag 48246443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 49140846 - 49140889
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  49140846 ctcggcagttaactactgaggttttcctcggcagttaactgcag 49140889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 49219796 - 49219851
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||| || |||||||||||||||||||||||||| || |||| |||||||||    
T  49219796 agttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctc 49219851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 52570565 - 52570652
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaa 312  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||  |||| ||||| ||  || ||||||| | |||||| ||||    
T  52570565 ctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccgaggggaaaaaa 52570652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 55385211 - 55385168
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  55385211 ctcgacagttaactaccgaggttttcctcggcagttaactgcag 55385168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 2062463 - 2062417
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||    
T  2062463 tttctcggcagttaactgccgaagttttcctcgacagttaactgcag 2062417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 3501897 - 3501935
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaactgc 3501935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 329
Target Start/End: Original strand, 7843038 - 7843120
Alignment:
Q  247 tttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatgt 329  Q
    ||||||| ||||||||||||||||| | ||  |||| |||  || ||||||| | ||||||||||||||||||||| ||||||    
T  7843038 tttcctctgcagttaactgcagtcggaattcaaatttctcggcagttaactgccgaggggataaaattgtattttactaatgt 7843120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 11270280 - 11270326
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||||    
T  11270280 tttctcggcagttaactgccgaagttttccttggcagttaactgcag 11270326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 13896876 - 13896918
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  13896876 tcggcagttaactaccgaggttttcctcgacagttaactgcag 13896918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 50604420 - 50604462
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  50604420 tcggcagttaactgccgaggttttcctcggtagttaactgcag 50604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 600543 - 600584
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||||||| |||||||||||    
T  600543 ctcggcagttaactaccgaggttttcctcgacagttaactgc 600584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 2950440 - 2950399
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  2950440 ctcggcagttaactaccgaggttttcctcggcacttaactgc 2950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 6745325 - 6745366
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  6745325 ctcggcagttaactaccgaggttttccttggcagttaactgc 6745366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 9429848 - 9429909
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| |||||||||||||||| | |||||||||| | |||||  ||||||||    
T  9429848 ctcggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctc 9429909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 34645635 - 34645590
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||    
T  34645635 tcggcagttaactgccgaggttttcctcgagagttaactgcagtcg 34645590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 34712760 - 34712801
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  34712760 cggcagttaactgccgaggttttcctcgggagttaactgcag 34712801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 36134270 - 36134311
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaa 262  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  36134270 ttttctcggcagttaactaccgaggttttccttggcagttaa 36134311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 40877760 - 40877813
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| |||||||||||||| |||| ||||||||||| |||| |||||    
T  40877760 gtttgaagtttcctcggcagttaactgccgaagttttcctcggtagtttactgc 40877813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 42165237 - 42165196
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  42165237 ctcggcagttaactaccgaggttttcctcggcaattaactgc 42165196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Original strand, 42760210 - 42760247
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||| |||||||||||||||||||||||||    
T  42760210 cggcagttaactaccgaggttttcctcggcagttaact 42760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 46406590 - 46406631
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  46406590 ctcggcagttaactaccgaggttttcctcggcacttaactgc 46406631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 49138688 - 49138647
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  49138688 ctcggcagttaactaccgaggttttcctcggcacttaactgc 49138647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 49144455 - 49144496
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  49144455 ctcggcagttaactaccgaggttttcttcggcagttaactgc 49144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 49196448 - 49196565
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||| |||||||||  || |||||||||||| |||||||||||  || |||||||||||||| ||| ||| || || |||||  ||||  |||||||| |    
T  49196448 ctcgacagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttact 49196547  T
Q  325 aatgtttctcagtcttat 342  Q
      |||||||||| |||||    
T  49196548 cgtgtttctcagccttat 49196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 51402397 - 51402454
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    |||||||||||||| ||||||||||||||| ||||||||| || |||| |||| ||||    
T  51402397 ctcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaatt 51402454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 54392027 - 54392068
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  54392027 ctcggcagttaactaccgaggttttcctcggcacttaactgc 54392068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 2432943 - 2433039
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||| || |||||||||||| |||||||||| |  ||  | || |||||||| ||| ||||||| | |||||||||||  ||||||||    
T  2432943 tcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtatttta 2433039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 30839147 - 30839202
Alignment:
Q  212 agtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||| | ||||||||||||| ||||||||||||| || ||||||||||||    
T  30839147 agtttgaagttct-tcggcagttaactgccgaggttttccttgggagttaactgcag 30839202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 36812911 - 36812859
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttt 277  Q
    |||||||||| ||| |||||||||||||||| |||||||||||| || |||||    
T  36812911 ctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttt 36812859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 2271312 - 2271355
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||| || |||||||||||||||||||    
T  2271312 ctcggcagttaactcccgaggattccctcggcagttaactgcag 2271355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 260
Target Start/End: Complemental strand, 2271430 - 2271395
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagtt 260  Q
    |||||||||||||| |||||||||||||||||||||    
T  2271430 ctcggcagttaactcccgaggttttcctcggcagtt 2271395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 7941184 - 7941141
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||    
T  7941184 ctcggcagttaactgccgaagttttcctcagcagttaactgcag 7941141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 9582625 - 9582546
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtc 300  Q
    |||| |||||||||||||  ||| ||||| |||||||||||||||||||||  |||| |||| |||  || |||||||||    
T  9582625 ttttttcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactgtc 9582546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 11380513 - 11380454
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||| |||| |||||||| |||||||||||||||||||  |  ||||||||||||||    
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctc 11380454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14398609 - 14398566
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| |||||||||||||||| || |||||||||||||||||||    
T  14398609 ctcgacagttaacttccgaggattccctcggcagttaactgcag 14398566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 20485530 - 20485573
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| | |||| ||||||||||||||||||||||||    
T  20485530 ctcggcagttaattgccgaagttttcctcggcagttaactgcag 20485573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 41612399 - 41612438
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  41612399 cggcagttaactaccgaggatttcctcggcagttaactgc 41612438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 47070546 - 47070491
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||||||| | || ||||||||||| |||||||| ||| |||||||    
T  47070546 ttttctcggcagttaactacggatgttttcctcggaagttaactacagccgaattt 47070491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 264
Target Start/End: Complemental strand, 48566438 - 48566403
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||| |||||||||||||||||||||||||    
T  48566438 gcagttaactaccgaggttttcctcggcagttaact 48566403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 250 - 324
Target Start/End: Original strand, 2745229 - 2745303
Alignment:
Q  250 cctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    ||||| ||||||||||||| |||||||  ||||||||| || ||||||  | ||||| |||||| ||||||||||    
T  2745229 cctcgacagttaactgcagccgaatttcaaattcctcagcagttaactaccgagggggtaaaatcgtattttatt 2745303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 6928723 - 6928685
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagt 259  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  6928723 ttttctcggcagtaaacttccgaggttttcttcggcagt 6928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 230 - 268
Target Start/End: Original strand, 7247864 - 7247902
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcag 7247902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 24703415 - 24703465
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    ||||||||||||| | |||| |||||||||||||||||||||  |||||||    
T  24703415 tcggcagttaactcctgaggatttcctcggcagttaactgcatccgaattt 24703465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 229 - 267
Target Start/End: Complemental strand, 34712303 - 34712265
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  34712303 gcagttaactgccgaggttttcctcggtagttaactgca 34712265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 220 - 266
Target Start/End: Complemental strand, 41844228 - 41844182
Alignment:
Q  220 gttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||    
T  41844228 gtttcctcggtagttaactaccgaggttttcctcagcagttaactgc 41844182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 2645530 - 2645489
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||| |||||||| ||||||||||||||||| |||||||||    
T  2645530 ctcggtagttaactgccgaggttttcctcggctgttaactgc 2645489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 2647803 - 2647762
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||  ||||||||||| |||||||||||||||    
T  2647803 ctcggcagttaaccaccgaggttttcttcggcagttaactgc 2647762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 2967924 - 2967965
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  2967924 ctcggcagttaactaccgaggttttcttcggcagctaactgc 2967965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 3493663 - 3493622
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||| ||| ||||||||||||    
T  3493663 ctcggcagttaactcccgaggtttttctctgcagttaactgc 3493622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 3497357 - 3497316
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||| ||| ||||||||||||    
T  3497357 ctcggcagttaactcccgaggtttttctctgcagttaactgc 3497316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 4008322 - 4008363
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||| |||| |||||||||||    
T  4008322 ctcggcagttaactcccgaggtttttctcgacagttaactgc 4008363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 27738685 - 27738636
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||||||||||||    
T  27738685 agtttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 27738636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 32592291 - 32592246
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtc 270  Q
    |||||||| |||||  ||| ||||||||||||||||||||||||||    
T  32592291 ctcggcagctaactgtcgaagttttcctcggcagttaactgcagtc 32592246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 34051312 - 34051353
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||| |||||||| |||||||||||||||||| ||||||||    
T  34051312 ctcggtagttaactaccgaggttttcctcggcacttaactgc 34051353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 42166409 - 42166450
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||| |||||||||||||||| |||||    
T  42166409 ctcggcagttaactaccgaagttttcctcggcagtttactgc 42166450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 45507402 - 45507439
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  45507402 agttaactgccgaggttttcctcggtagttaactgcag 45507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 47443574 - 47443529
Alignment:
Q  220 gttttctcggcagttaacttccgaggttttcctcggcagttaactg 265  Q
    ||||||||||||||||||| |||| ||||||||||  |||||||||    
T  47443574 gttttctcggcagttaactgccgaagttttcctcgaaagttaactg 47443529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 49217169 - 49217112
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    ||||||| |||||| ||||| |||| || |||||||||||||||||| |||| |||||    
T  49217169 ctcggcaattaactaccgagatttttcttggcagttaactgcagtcggatttctaatt 49217112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 268
Target Start/End: Original strand, 49265823 - 49265860
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  49265823 agttaacttccgaggatttcctcggcagtaaactgcag 49265860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 55176336 - 55176389
Alignment:
Q  214 tttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||| |||| |||||||||||||| |||| ||||||||||  |||||||||||    
T  55176336 tttgaggtttcctcggcagttaactgccgaagttttcctcgatagttaactgca 55176389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 7e-33; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 135 - 286
Target Start/End: Complemental strand, 17342307 - 17342155
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttat-nnnnnnnntaatttaaagtttgaagttttctcggcagt 233  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |         ||| |||| |||||||||||||||||||||    
T  17342307 acaatgaattaaatagtattaaaatcaataaatattaataatgacaatataagatttttgtaaaaataaataaattaaggtttgaagttttctcggcagt 17342208  T
Q  234 taacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||| |||| ||||| ||||| |||||||||||| ||| || | ||||||||    
T  17342207 taactaccgaagtttttctcggtagttaactgcagccgatttatgaattcctc 17342155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 19994164 - 19994244
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataag 187  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19994164 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataag 19994244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 17343287 - 17343443
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaa 206  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |         ||    
T  17343287 agtgttgattatgttttctaataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataaggtttttgtaaaaa----aa 17343382  T
Q  207 tttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
       ||||||||||||||||||||||||||||| | || |||||| |||| | |||||||||    
T  17343383 aaaaaagtttgaagttttctcggcagttaactacagaagttttcttcggtaattaactgca 17343443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 107 - 298
Target Start/End: Original strand, 9473539 - 9473733
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagatttttatnnnnnnnntaa 206  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||| |         ||    
T  9473539 agtgttgattatgtttcctcatagaatcacaatgaattaaatagtattaaaattaataaatattaataatgacaatttaaggtttttgtaaaaaaataaa 9473638  T
Q  207 ---tttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
        |||| ||||||||||| || ||||||||||| ||||  |||||||||| |||||||||||| ||| || | |||||||| ||| |||||||    
T  9473639 aatattaaggtttgaagtttccttggcagttaactaccgaaattttcctcggtagttaactgcagccgatttatgaattcctcgacaattaactg 9473733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 9473053 - 9472973
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataag 187  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| ||||    
T  9473053 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattaaaatcaacaaatattaataatgacaatttaag 9472973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 342
Target Start/End: Complemental strand, 8109461 - 8109348
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatg 328  Q
    |||||||||| |||||||||||||||||||||||||| || || || ||||||||||| ||| ||||||  ||||||| |||||| |||||||| |  ||    
T  8109461 gcagttaactcccgaggttttcctcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtattttactcgtg 8109362  T
Q  329 tttctcagtcttat 342  Q
    |||||||| |||||    
T  8109361 tttctcagccttat 8109348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 9890068 - 9889971
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||  || ||||||| | ||||| |||||| ||||||||    
T  9890068 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 9889971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 19993220 - 19993161
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatatt-aataatgacaatataagattttt 193  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  19993220 acaatgaattaaatagtattagaatcaataaatattaaataatgacaatataaggttttt 19993161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 33383878 - 33383807
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||| || ||||| ||| ||||||    
T  33383878 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttttaaaatcctcgacaattaact 33383807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 15995796 - 15995723
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||  ||||||||||    
T  15995796 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactg 15995723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 19069261 - 19069188
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||  ||||||||  ||||||||||    
T  19069261 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactg 19069188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 55407792 - 55407853
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||    
T  55407792 ctcggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctc 55407853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 955865 - 955793
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||| |||| ||||||||| || |||||||    
T  955865 tcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactg 955793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 37022056 - 37022111
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  37022056 ttttctcggcagttaactgccgaggttttcctcggtagttaactgcagccgaattt 37022111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 1042009 - 1041948
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  1042009 ctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctc 1041948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 11494616 - 11494508
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatta 325  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||  |||| |||||||| ||| |||| || | |||||| ||||  |||||||| |     
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcagccg-gttttgaattcctcgacagttaattgccgaggggacaaaaacgtattttactc 11494518  T
Q  326 atgtttctca 335  Q
     |||||||||    
T  11494517 gtgtttctca 11494508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 55793994 - 55793941
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||    
T  55793994 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggattttt 55793941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 56138326 - 56138269
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    |||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||    
T  56138326 ctcggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatt 56138269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 29700302 - 29700398
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||| |||||| ||||||||||||||||||||||||||||| ||  | || ||||||||| || ||||||||| ||| || ||||  ||||||||    
T  29700302 tcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcgtatttta 29700398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 37959720 - 37959816
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||||||||| |||| ||||||||||||||||||||||||  |  | || |||||||||||| ||||||| | ||||| |||||  ||||||||    
T  37959720 tcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtatttta 37959816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 6178109 - 6178152
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  6178109 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 6178152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 21022887 - 21022930
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  21022887 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 21022930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 34151687 - 34151616
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
    ||||||||| ||| ||||||||||||||||||||||||||||| ||| |||| |||| |||  |||||||||    
T  34151687 tcggcagtttactaccgaggttttcctcggcagttaactgcagccgatttttgaattactcggcatttaact 34151616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 324
Target Start/End: Complemental strand, 41023460 - 41023361
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| |||||| ||||||| |||||||||||||| || ||||  |||| |||  || ||||||| ||||| | |||||| ||||||||||    
T  41023460 ctcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgccaaggaggtaaaatcgtattttatt 41023361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 48256566 - 48256625
Alignment:
Q  224 tctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattc 283  Q
    ||||||||||||||| | || |||||||||||||||||||||||| || |||||||||||    
T  48256566 tctcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaattc 48256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 49094158 - 49094115
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  49094158 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 49094115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 958593 - 958635
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  958593 ctcggcagttaactaccgaggttttcctcggcagttaactgca 958635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 39590568 - 39590610
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgcag 39590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 49572904 - 49572974
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtc 300  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||| | || |||||||| ||| |||||||||    
T  49572904 cagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtc 49572974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 51426610 - 51426536
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtc 300  Q
    ||||||||||||| | |||||||| ||||||| |||||||||| ||| |||| |||||||| ||| |||||||||    
T  51426610 tcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtc 51426536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 28234494 - 28234449
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||    
T  28234494 ttttctcggcagttaactaccgaggttttcctcggcatttaactgc 28234449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 30726740 - 30726781
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  30726740 ctcggcagttaactaccgaggttttcctcggcagttaactgc 30726781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 31425317 - 31425358
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  31425317 ctcggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 37563279 - 37563320
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  37563279 ctcggcagttaactaccgaggttttcctcggcagttaactgc 37563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 39773478 - 39773437
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  39773478 ctcggcagttaactaccgaggttttcctcggcagttaactgc 39773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 40358279 - 40358320
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  40358279 ctcggcagttaactaccgaggttttcctcggcagttaactgc 40358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 49563918 - 49563873
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||    
T  49563918 ttttctcggccgttaactaccgaggttttcctcggcagttaactgc 49563873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 54634014 - 54634055
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  54634014 ctcggcagttaactaccgaggttttcctcggcagttaactgc 54634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 21018004 - 21018056
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  21018004 tcggcagttaactgccgaggttttcctcggcagttaattgcagccggattttt 21018056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 21470980 - 21470932
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtc 270  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||    
T  21470980 tttctcggcagttaactaccgaggttttcctctgcggttaactgcagtc 21470932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 15999798 - 15999841
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  15999798 ctcggcagttaactaccgaggttttcctcggcagttaattgcag 15999841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 16984160 - 16984203
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  16984160 ctcggcagttaactatcgaggttttcctcggcagttaactgcag 16984203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 229 - 268
Target Start/End: Complemental strand, 20208580 - 20208541
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactgcag 20208541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 26932658 - 26932619
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  26932658 ctcggcagttaactaccgaggttttcctcggcagttaact 26932619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 41795355 - 41795398
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  41795355 ctcggcagttaactaacgaggttttcctcggcagttaactgcag 41795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 50278817 - 50278884
Alignment:
Q  245 gttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaa 312  Q
    |||||||||||||||||||||||| || |||| |||||| || ||| ||||||||| |||||| ||||    
T  50278817 gttttcctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaa 50278884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 51492145 - 51492102
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||||||||||| |||||||||||||||    
T  51492145 ctcggcagttaactaccgaggttttcctaggcagttaactgcag 51492102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 19073655 - 19073697
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  19073655 tcggcagttaactaccgaggatttcctcggcagttaactgcag 19073697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 33409596 - 33409554
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  33409596 tcggcagttaactgccgaggttttcctcgggagttaactgcag 33409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 33410229 - 33410271
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  33410229 tcggcagttaactgccgaggttttcctcgggagttaactgcag 33410271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 56565840 - 56565790
Alignment:
Q  217 gaagttttc-tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||||||    
T  56565840 gaagttttcctcggtagttaactcccgaggttttcctcggcagttaactgc 56565790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 1089583 - 1089624
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  1089583 ctcggcagttaactaccgaggttttcctcggcatttaactgc 1089624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 4783719 - 4783678
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  4783719 tcggcagttaactgccgaagttttcctcggcagttaactgca 4783678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 11084006 - 11084047
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  11084006 ctcggcagttaactgccgaggttttcctcgggagttaactgc 11084047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 21018108 - 21018067
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  21018108 ctcggcagttaactaccgaggttttcttcggcagttaactgc 21018067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 38368308 - 38368259
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||| |||| ||| |||| ||||||||||||||||||||||||    
T  38368308 agttttctcggtagtttactaccgaagttttcctcggcagttaactgcag 38368259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 39588142 - 39588105
Alignment:
Q  249 tcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||||||||||||||||| |||||||||    
T  39588142 tcctcggcagttaactgcagtcgaatttctaattcctc 39588105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 40354679 - 40354638
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  40354679 ctcggcagttaactaccgaggttttcttcggcagttaactgc 40354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 41793438 - 41793397
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  41793438 ctcggcagttaactaccgaggttttcctcggcacttaactgc 41793397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 49169096 - 49169137
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  49169096 ctcggcagttaactaccgaggtattcctcggcagttaactgc 49169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 67666 - 67626
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactg 265  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  67666 ctcggcagttaactaccgaggttttcctcgacagttaactg 67626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 20209306 - 20209369
Alignment:
Q  204 taatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||| | ||||||||||| |||||||||||||| |||| ||||| ||| ||||||||||||||    
T  20209306 taatttcatgtttgaagttt-ctcggcagttaactaccgaagttttactcagcagttaactgcag 20209369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 16983595 - 16983556
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactg 265  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  16983595 tcggcagttaactaccgaggtttttctcggcagttaactg 16983556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 18884503 - 18884546
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||    
T  18884503 ctcggcagttaactgccgaagtttttctcggcagttaactgcag 18884546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 34503799 - 34503740
Alignment:
Q  209 taaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| ||| ||||| |||||||||||||| |||| ||||| ||||| ||||||||||||    
T  34503799 taaagcttggagtttcctcggcagttaactaccgaagtttttctcggtagttaactgcag 34503740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 38460500 - 38460457
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| | ||||||||||||||| |||||||||||||    
T  38460500 ctcggcagttaattaccgaggttttcctcgacagttaactgcag 38460457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 43176627 - 43176670
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||    
T  43176627 ctcggtagttaactgccgaagttttcctcggcagttaactgcag 43176670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 44051091 - 44051134
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||    
T  44051091 ctcggcagttaactaccgaggatttcctcgggagttaactgcag 44051134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 44561329 - 44561372
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||    
T  44561329 ctcggcagttaactaccgagattttcctcggtagttaactgcag 44561372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 44680116 - 44680077
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  44680116 cggcagttaactaccgaggatttcctcggcagttaactgc 44680077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 266
Target Start/End: Complemental strand, 52529281 - 52529246
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||| |||||||||||||||||||||||||||    
T  52529281 agttaactaccgaggttttcctcggcagttaactgc 52529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 9655908 - 9655954
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||||||||| ||| |||| ||||||||||| |||||||||||||||    
T  9655908 ctcggcagtttactgccgaagttttcctcggtagttaactgcagtcg 9655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 21015813 - 21015771
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||||||||||||| ||||||||| |||| |||||||||||||    
T  21015813 ctcggcagttaactaccgaggtttccctcagcagttaactgca 21015771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 26791722 - 26791680
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||    
T  26791722 tcggcagttaactgccgaggtttttctcggtagttaactgcag 26791680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 26792246 - 26792284
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  26792246 ggcagttaactaccgagattttcctcggcagttaactgc 26792284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 37015969 - 37015931
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  37015969 ggcagttaactaccgaagttttcctcggcagttaactgc 37015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 41933622 - 41933664
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||    
T  41933622 tcggcagttaactaccgaggtttttctcggtagttaactgcag 41933664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 6175951 - 6175910
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||||| |||| ||||||||    
T  6175951 ctcggcagttaactaccgaggttttccttggcacttaactgc 6175910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 9013909 - 9013872
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  9013909 gcagttaactatcgaggttttcctcggcagttaactgc 9013872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 23221663 - 23221712
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| ||||| |||| ||| |||| ||||||||||||||||||||||||    
T  23221663 agtttcctcggtagtttactaccgaagttttcctcggcagttaactgcag 23221712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 262
Target Start/End: Complemental strand, 37563139 - 37563102
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaa 262  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  37563139 ctcggtagttaactaccgaggttttcctcggcagttaa 37563102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 41800936 - 41800977
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  41800936 ctcggcagttaactaccgaggttttcttcggcagctaactgc 41800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 49096317 - 49096354
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaa 262  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  49096317 ctcggcagttaactaccgaggttttcctcggcacttaa 49096354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 7e-33; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 109 - 268
Target Start/End: Original strand, 43258613 - 43258775
Alignment:
Q  109 tgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattt---ttatnnnnnnnnta 205  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   | |          |    
T  43258613 tgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagtttttcgtaaaaaaaaataaa 43258712  T
Q  206 atttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    | |||||||||||||||| |||||||||||||| || | |||||| |||| ||||||||||||    
T  43258713 aattaaagtttgaagtttcctcggcagttaactaccaaagttttcttcggtagttaactgcag 43258775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 42176217 - 42176134
Alignment:
Q  110 gttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  42176217 gttgattatgtttccttataaaatcacaatgaattaaatagtattagaatcaataaatattaataataacaatataaggttttt 42176134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 43257913 - 43257837
Alignment:
Q  111 ttgattatatttcctcataaaattacaatgaattaaatagtattagaatc-aataaatattaataatgacaatataa 186  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43257913 ttgattatgtttcatcataaaatcacaatgaattaaatagtattagaatcaaataaatattaataatgacaatataa 43257837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 29397984 - 29397909
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtc 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||| || |||||||||    
T  29397984 ctcggcagttaactcccgaggttttcctcggcagttaactgcagtcggatttctaatttctcagcaattaactgtc 29397909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 42177117 - 42177175
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  42177117 acaatgaattaaatagtattagaatcaataaatattagtaatgacaatataaggttttt 42177175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 27276373 - 27276470
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| || ||||  ||||||||| || ||||||| | ||||| |||||| ||||||||    
T  27276373 ctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtatttta 27276470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 3795411 - 3795327
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggata 309  Q
    ||||||||||||||||| |||||||||||||||||||||||||| || ||||  |||||||| ||| ||||||| | ||||||||    
T  3795411 ctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgaggggata 3795327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 225 - 336
Target Start/End: Complemental strand, 24512241 - 24512130
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| ||||||||||  |||||| ||||||||||  |  ||||||||||||||||| ||||||||| ||||| |||||  |||||||| |    
T  24512241 ctcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaacagttaactgtcgagggggtaaaaacgtattttact 24512142  T
Q  325 aatgtttctcag 336  Q
      ||||||||||    
T  24512141 tgtgtttctcag 24512130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 25964889 - 25964824
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||||||  |||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  25964889 ttttctcggctattaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctc 25964824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 45137433 - 45137529
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||  ||| |||||| ||||||||||||||||| |||||||||||||||||  || ||||||| ||||| |  ||||| ||||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtatttta 45137529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 30271143 - 30271076
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
    ||||||||| |||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||||    
T  30271143 cagttaactaccgaagttttcctcagcagttaactgcagccggatttttaattcctcaacctttaact 30271076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 343
Target Start/End: Original strand, 8268749 - 8268866
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatta 325  Q
    ||||||||||||| |||||||||| ||||  |||||| ||||| ||| ||||  |||||| |||| ||||||| | |||||| ||||| |||||||| ||    
T  8268749 tcggcagttaactgccgaggtttttctcgatagttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttacta 8268848  T
Q  326 atgtttctcagtcttata 343  Q
    ||||   |||||||||||    
T  8268849 atgtacgtcagtcttata 8268866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 34639309 - 34639370
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||| || ||||||||||    
T  34639309 ttttctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatt 34639370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 17424206 - 17424154
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttt 277  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || |||||    
T  17424206 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttt 17424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 3937851 - 3937894
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  3937851 ctcggcagttaacttccgaggtttacctcggcagttaactgcag 3937894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 25184829 - 25184872
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  25184829 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 25184872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 43982273 - 43982230
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  43982273 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 43982230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 23409501 - 23409543
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  23409501 tcggcagtttacttccgaggttttcctcggcagttaactgcag 23409543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 30273149 - 30273207
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattc 283  Q
    ||||||| |||||| |||||||||||||||||||||||||| || || |||||||||||    
T  30273149 ctcggcaattaactaccgaggttttcctcggcagttaactgtagccggatttttaattc 30273207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 41500233 - 41500291
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattc 283  Q
    |||||||||||||| |||||||||| |||||||||||||||||| || ||||| |||||    
T  41500233 ctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattc 41500291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 19187219 - 19187264
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  19187219 tttctcggcagttaactaccgaggttttcctcggcaggtaactgca 19187264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 22003400 - 22003441
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22003400 ctcggcagttaactaccgaggttttcctcggcagttaactgc 22003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 23786202 - 23786081
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattt 320  Q
    |||||||||||||||||| |||| | ||| |||  || |||||||  | || ||||||||||||||  || ||||||| | |||||| |||||  |||||    
T  23786202 ttttctcggcagttaactaccgaagattttctcaacaattaactgtcgccggatttttaattcctcggcagttaactgccgaggggacaaaatcatattt 23786103  T
Q  321 tattaatgtttctcagtcttat 342  Q
    || ||||||||||||| |||||    
T  23786102 tactaatgtttctcagccttat 23786081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 28468715 - 28468674
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  28468715 ctcggcagttaactaccgaggttttcctcggcagttaactgc 28468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 34921756 - 34921801
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||    
T  34921756 ttctcggcagttaactaccgaggttttcctcagcagttaactgcag 34921801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 28477069 - 28477109
Alignment:
Q  228 ggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28477069 ggcagttaactaccgaggttttcctcggcagttaactgcag 28477109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 43536176 - 43536136
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactg 265  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  43536176 ctcggcagttaactaccgaggttttcctcggcagttaactg 43536136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 3943191 - 3943234
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  3943191 ctcggcagttaactaccgaggtttttctcggcagttaactgcag 3943234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 5351731 - 5351770
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  5351731 ctcggcagttaactaccgaggttttcctcggcagttaact 5351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 7189950 - 7189993
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  7189950 ctcggcagttaactaccgaagttttcctcggcagttaactgcag 7189993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 7263091 - 7263048
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  7263091 ctcggcagttaactcccgaggatttcctcggcagttaactgcag 7263048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 12908426 - 12908501
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||||||||||||||  | |||||||||||||||||||||||||| | | |||| |||| ||| ||| |||||||    
T  12908426 ttctcggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactg 12908501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 14456576 - 14456533
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  14456576 ctcggtagttaactgccgaggttttcctcggcagttaactgcag 14456533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 23346854 - 23346811
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||||||||||| |||||||||||||||    
T  23346854 ctcggcagttaactaccgaggttttccttggcagttaactgcag 23346811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 33222690 - 33222647
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  33222690 ctcggcagttaactgccgaagttttcctcggcagttaactgcag 33222647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 41183223 - 41183266
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  41183223 ctcggcagttaactaccgaggttttcctcggtagttaactgcag 41183266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 45475516 - 45475417
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    ||||||| |||||||| |||||||||||||||||||||||||| || ||  |||| |||| |||  || ||||||| | |||||  ||||| ||||||||    
T  45475516 ttctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtatttta 45475417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 2271733 - 2271779
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||    
T  2271733 tttctcggcagttaactgccgaagttttcctcgacagttaactgcag 2271779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 40221130 - 40221172
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  40221130 tcggcagttaactgccgaggttttcctcggtagttaactgcag 40221172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 41008924 - 41008970
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||    
T  41008924 tttctcggcagttaactaccgaagttttcctcggcagttaaatgcag 41008970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 2983472 - 2983431
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  2983472 cggcagttaactgccgaggttttcctcggtagttaactgcag 2983431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 3935937 - 3935896
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  3935937 ctcggcagttaactaccgaggttttcctcggcacttaactgc 3935896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 16583589 - 16583638
Alignment:
Q  246 ttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaa 295  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||| ||||    
T  16583589 tttttctcggcagttaactgcagccgaatttttaattcctcgacagttaa 16583638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 18000306 - 18000265
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  18000306 ctcgccagttaactaccgaggttttcctcggcagttaactgc 18000265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 24754023 - 24754084
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||| | | |||||||||||||||| |||||||||||| |||||||  ||||||||    
T  24754023 ctcggcagtttattaccgaggttttcctcggtagttaactgcagccgaatttcaaattcctc 24754084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 29093827 - 29093872
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtc 270  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||    
T  29093827 ctcggcagttaactgccaaggttttcctcggcaattaactgcagtc 29093872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 39798517 - 39798476
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  39798517 ctcggcagttaactcccgaggatttcctcggcagttaactgc 39798476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 42499860 - 42499819
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  42499860 ctcggcagttaactaccgaggttttcctcggcacttaactgc 42499819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 44100797 - 44100838
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  44100797 ctcggtagttaactaccgaggttttcctcggcagttaactgc 44100838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 10825296 - 10825256
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagtta 261  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  10825296 ttttctcggcagttaactgccgaggttttcctcgacagtta 10825256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 41565391 - 41565351
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||| |||||||||||||||| ||||||||||    
T  41565391 tcggcagttaactgccgaggttttcctcggtagttaactgc 41565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 43984301 - 43984341
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  43984301 tcggcagttaactaccgaggttttcctcggcacttaactgc 43984341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 23347327 - 23347370
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||| || |||||||||||||||| ||||||||||||    
T  23347327 ctcggcagttagctaccgaggttttcctcggtagttaactgcag 23347370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 30493433 - 30493394
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  30493433 ctcggcagttaactaccgagattttcctcggcagttaact 30493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 31974246 - 31974289
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||    
T  31974246 ctcggcagttaactgccgagattttcctcggtagttaactgcag 31974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 38779604 - 38779659
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||| ||||||||||||||  ||| ||||||||||| |||| |||||||    
T  38779604 gtttgaagtttcctcggcagttaactgtcgaagttttcctcggtagtttactgcag 38779659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 39489261 - 39489206
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    ||||||||| |||| ||| |||| |||||||||| |||||||||||||||| ||||    
T  39489261 ttttctcggtagtttactgccgaagttttcctcgacagttaactgcagtcgtattt 39489206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 43943763 - 43943720
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||    
T  43943763 ctcggcagttaactaccgagtttttcctcgacagttaactgcag 43943720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 4286701 - 4286743
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||    
T  4286701 tcggcagttaactgccgaggttttcatcggaagttaactgcag 4286743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 26543989 - 26544031
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||||||||||||| | ||||||||||||    
T  26543989 tcggcagttaactaccgaggttttcctcagtagttaactgcag 26544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 28138654 - 28138612
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||||||||||||| |||| |||||||||||||||||| ||||    
T  28138654 ctcggcagttaactgccgaagttttcctcggcagttaattgca 28138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 29407045 - 29407003
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| |||| |||||||||||||||||| |||||    
T  29407045 tcggcagttaactgccgaagttttcctcggcagttaattgcag 29407003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 35493341 - 35493383
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||| ||||  |||||||||||||||||||||||    
T  35493341 tcggcagttaactaccgatattttcctcggcagttaactgcag 35493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 232 - 266
Target Start/End: Original strand, 41564498 - 41564532
Alignment:
Q  232 gttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||| |||||||||||||||||||||||||||    
T  41564498 gttaactaccgaggttttcctcggcagttaactgc 41564532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 43618646 - 43618604
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| |||||||| |||||||||||||||| ||||||||||||    
T  43618646 tcggtagttaactgccgaggttttcctcggtagttaactgcag 43618604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 7267443 - 7267484
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||| ||||||| |||||||||||||    
T  7267443 ctcggcagttaactaccgagattttccttggcagttaactgc 7267484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 17420642 - 17420601
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||| ||| ||||||||||||||||    
T  17420642 ctcggcagttaactaccgaggattttctcggcagttaactgc 17420601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 17426364 - 17426405
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| | |||||||||||||||| ||||||||    
T  17426364 ctcggcagttaactactgaggttttcctcggcacttaactgc 17426405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 28139559 - 28139608
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||| |||| |||||||||||||||||| ||||| ||| |||||    
T  28139559 gcagttaactgccgaagttttcctcggcagttaaatgcagccgatttttt 28139608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 32956342 - 32956399
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    |||||||||| ||| ||||| ||||||||||||||||||| ||| || |||| |||||    
T  32956342 ctcggcagttgactaccgagattttcctcggcagttaactacagccggatttctaatt 32956399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 35490774 - 35490741
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||| |||||||||||||||||||||||||    
T  35490774 agttaactaccgaggttttcctcggcagttaact 35490741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 36255732 - 36255785
Alignment:
Q  245 gttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||||||||||||||||||||||  ||  ||||||||||||| ||| |||||||    
T  36255732 gttttcctcggcagttaactgcaaccgtgtttttaattcctcgacagttaactg 36255785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 39947669 - 39947632
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  39947669 gcagttaactaccgaagttttcctcggcagttaactgc 39947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 41497540 - 41497503
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  41497540 agttaactaccgaggttttcctcggcaattaactgcag 41497503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 43491185 - 43491140
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||||| || |||||||||||| ||||||| |||||    
T  43491185 ttctcggcagttaactaccaaggttttcctcgacagttaattgcag 43491140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 43950244 - 43950357
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatta 325  Q
    ||||||||||||| ||| |  |||||||||||||||| ||||||||  |||| |||||| || || ||||||| | |||||  |||| ||||||||| |     
T  43950244 tcggcagttaactcccgcg--tttcctcggcagttaattgcagtcg-gttttgaattccacagcagttaactgccgagggggcaaaaatgtattttactc 43950340  T
Q  326 atgtttctcagtcttat 342  Q
     |||||||||| |||||    
T  43950341 gtgtttctcagccttat 43950357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 40142536 - 40142622
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  40142536 agtgttgattatgtttcctcataaaatcacaatgaattaaatagtattagaatcaataaatattaataatgataatataaggttttt 40142622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 42024965 - 42025051
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| |||||    
T  42024965 agtgttgattatgtttactcatagaattacaatgaattaaatagtattaaaatcaataaatattaataatgataatttaaggttttt 42025051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 42024483 - 42024399
Alignment:
Q  109 tgttgattatatttcctcataaaattacaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    |||||||||||||| |||||| ||  ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  42024483 tgttgattatattttctcatagaaccacaataaattaaatagtattaaaatcaataaatattaataatgacaatttaagattttt 42024399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 42499483 - 42499386
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||  || ||||||||| | ||| |||||| ||||||||    
T  42499483 ctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaaggggtaaaatcgtatttta 42499386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 107 - 186
Target Start/End: Original strand, 7611631 - 7611713
Alignment:
Q  107 agtgttgattatatttcctcataaaattacaatgaattaaatagt---attagaatcaataaatattaataatgacaatataa 186  Q
    |||||||||||| ||| | |||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  7611631 agtgttgattatgttttcccataaaatcacaatgaattaaatagtagtattagaatcaataaatattaataatgacaatataa 7611713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 10705328 - 10705225
Alignment:
Q  219 agttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtat 318  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||| ||| ||||||||| |||  || ||||||| |||||||  |||| |||||    
T  10705328 agttttctcggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtat 10705229  T
Q  319 ttta 322  Q
    ||||    
T  10705228 ttta 10705225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 225 - 338
Target Start/End: Original strand, 30355238 - 30355351
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||| ||| || ||||||| | |||||  ||||  |||||||| |    
T  30355238 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtattttact 30355337  T
Q  325 aatgtttctcagtc 338  Q
      ||||||||||||    
T  30355338 cgtgtttctcagtc 30355351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 34742394 - 34742467
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| ||| |||||||    
T  34742394 ctcgacagttaacttccgaggttttcctcggcagttaactgcagtcagatttctaattcctcgacaattaactg 34742467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 47776406 - 47776289
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||| | ||||||||||||||||||||||||||||| |  |||||||||| |||  || ||||||||| |||||  ||||| |||||||| |    
T  47776406 ctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtattttact 47776307  T
Q  325 aatgtttctcagtcttat 342  Q
      |||||||||| |||||    
T  47776306 cgtgtttctcagccttat 47776289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 47061003 - 47060928
Alignment:
Q  222 tttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||| |||||||| ||| |||||||    
T  47061003 tttctcggcagttaactaccgaggttttcctcggcagttaactacagccg-attttgaattcctcgacagttaactg 47060928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 17840889 - 17840940
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  17840889 ctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggattt 17840940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 40587735 - 40587673
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctca 287  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||| |||| ||||||||||    
T  40587735 ctcggcagttaactactgaggttttcctcgacagttaactgcagtcggatttctaattcctca 40587673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 9494805 - 9494866
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||  |||||||||||||    
T  9494805 ctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctc 9494866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 306
Target Start/End: Complemental strand, 36392195 - 36392118
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    |||||||||||  |||||||||||||||||||||| |||  ||| |||| |||||||||||| ||||||||| |||||    
T  36392195 gcagttaacttttgaggttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggg 36392118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 37340376 - 37340259
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    |||||||||||||| |||||||||| |||||||||||||||||  ||  |||| |||||||| ||| ||||||||| | | || ||||  ||||||||||    
T  37340376 ctcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttatt 37340277  T
Q  325 aatgtttctcagtcttat 342  Q
     ||||  || ||||||||    
T  37340276 tatgtgccttagtcttat 37340259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 41884125 - 41884166
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41884125 ctcggcagttaacttccgaggttttcctcggcagttaactgc 41884166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 9367723 - 9367766
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  9367723 ctcggcagttaactaccgaggttttcctcggcagttaactgcag 9367766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 225 - 272
Target Start/End: Complemental strand, 35606863 - 35606816
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcga 272  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  35606863 ctcggcagttaactaccgaggttttcctcggcagttaactgccgtcga 35606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 36781446 - 36781493
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtc 270  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  36781446 ttctcggcagttaactgccgaggttttcctcgggagttaactgcagtc 36781493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 40141585 - 40141534
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataa 186  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  40141585 acaatgaattaaataatattagaattaataaatattaataatgataatataa 40141534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 306
Target Start/End: Complemental strand, 34622566 - 34622492
Alignment:
Q  232 gttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    ||||||| |||||| |||||||| ||||||||||||||||  || ||||||||||  || |||||||||||||||    
T  34622566 gttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggg 34622492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 42795107 - 42795153
Alignment:
Q  220 gttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||    
T  42795107 gttttctcggcagttaactgccgaagttttcctcggcagttaactgc 42795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 15070429 - 15070388
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  15070429 ctcggcagttaactaccgaggttttcctcggcagttaactgc 15070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 18105447 - 18105406
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  18105447 ctcggcagttaactaccgaggttttcctcggcagttaactgc 18105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 34738438 - 34738377
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |  |||| |||||||||    
T  34738438 ctcggcagttaactaccgaggttttcctcggcatttaactgcagccagatttctaattcctc 34738377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 45767860 - 45767901
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  45767860 ctcggcagttaactaccgaggttttcctcggcagttaactgc 45767901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 29592612 - 29592536
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    ||||||||| |||| |||||| ||||||||||| |||||||| ||||  |||||||| ||| ||||||| |||||||    
T  29592612 cagttaactaccgaagttttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactgccaagggg 29592536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 38555392 - 38555455
Alignment:
Q  204 taatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||| | ||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  38555392 taattttaggtttgaaatttt-tcggcagttaactgccgaagttttcctcggcagttaactgcag 38555455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 10098116 - 10098159
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  10098116 ctcgtcagttaactcccgaggttttcctcggcagttaactgcag 10098159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 247 - 342
Target Start/End: Original strand, 27453615 - 27453710
Alignment:
Q  247 tttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatgtttctcagtcttat 342  Q
    |||||||||||||||||||||| || ||||||||||||||  || ||||||| | |||||  ||| | |||||||| | |||||||| || |||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagccttat 27453710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 29112459 - 29112404
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||| |||| ||| |||||||||| |||| ||||||||||||||||||||||||    
T  29112459 gtttgaggtttcctcagcagttaactgccgaagttttcctcggcagttaactgcag 29112404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 247 - 322
Target Start/End: Original strand, 29593349 - 29593424
Alignment:
Q  247 tttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||||||||||| || | ||  ||||||||  || ||||||||| ||||| |||||||||||||||    
T  29593349 tttcctcggcagttaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaattgtatttta 29593424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 42682068 - 42682025
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||| | |||||||||||||||||||||||||||||    
T  42682068 ctcggcagttaattaccgaggttttcctcggcagttaactgcag 42682025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 19044367 - 19044321
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||||    
T  19044367 ctcggcagttaactaccgaagttttcctcggcaattaactgcagtcg 19044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 20710269 - 20710315
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||||    
T  20710269 ctcggcagttaactaccgaagttttcctcggcaattaactgcagtcg 20710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 5537926 - 5537885
Alignment:
Q  245 gttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  5537926 gttttcctcggcagttaactgcagccgaatttctaattcctc 5537885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 9365753 - 9365712
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  9365753 ctcggcagttaactaccgaggttttcctcggcacttaactgc 9365712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 10098440 - 10098399
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  10098440 ctcggcagttaactaccgaggttttcctcggcacttaactgc 10098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 15074227 - 15074268
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  15074227 ctcgacagttaactaccgaggttttcctcggcagttaactgc 15074268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 17834561 - 17834520
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  17834561 ctcggcagttaactaccgaagttttcctcggcagttaactgc 17834520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 30791007 - 30791048
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  30791007 ctcggcagttaactaccgaggttttcctcggtagttaactgc 30791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 14412344 - 14412407
Alignment:
Q  204 taatttaaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||| ||||||||| ||  |||||||||||||| |||| |||||||||||||||||| |||||    
T  14412344 taatttcaagtttgaaattc-ctcggcagttaactgccgaagttttcctcggcagttaattgcag 14412407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 39460605 - 39460517
Alignment:
Q  247 tttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttattaatgtttctca 335  Q
    ||||||| |||||||||||||| || ||||||||||||||  || | ||||| | || ||||||||| |||||||| |  |||||||||    
T  39460605 tttcctcagcagttaactgcagccggatttttaattcctcggcaatcaactgccgagaggataaaatcgtattttactcgtgtttctca 39460517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 41049196 - 41049260
Alignment:
Q  233 ttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaact 297  Q
    |||||| ||||||||||||||||||||||||||||| ||| | || ||||| || ||| ||||||    
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaact 41049260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 298
Target Start/End: Complemental strand, 46860584 - 46860512
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactg 298  Q
    ||||||||||||| ||||||||| ||||   |||||||||||||||  |||| |||||||| ||| |||||||    
T  46860584 tcggcagttaactgccgaggtttgcctcaatagttaactgcagtcggtttttcaattcctcgacagttaactg 46860512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 48590339 - 48590391
Alignment:
Q  226 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    ||||||||||||| ||||| |||||||||| |||||||||||| ||| |||||    
T  48590339 tcggcagttaactgccgagattttcctcggtagttaactgcagccgatttttt 48590391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 5541585 - 5541546
Alignment:
Q  227 cggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  5541585 cggcagttaactcccgaggatttcctcggcagttaactgc 5541546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 7953721 - 7953768
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagtt 260  Q
    ||||||||||| |||||||||||||| |||| ||||||||||| ||||    
T  7953721 gtttgaagtttcctcggcagttaactgccgaagttttcctcggtagtt 7953768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 13645341 - 13645384
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| || | ||||||||||||||||||||||||    
T  13645341 ctcggcagttaactgcctaagttttcctcggcagttaactgcag 13645384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 14102347 - 14102390
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| |||||||||||||||||| |||||    
T  14102347 ctcggcagttaactgccgaagttttcctcggcagttaattgcag 14102390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 28980171 - 28980214
Alignment:
Q  225 ctcggcagttaacttccgaggttttcc-tcggcagttaactgca 267  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  28980171 ctcggcagttaactaccgaggttttccttcggcagttaactgca 28980214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 41047851 - 41047812
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  41047851 ctcggcagttaactaccgaagttttcctcggcagttaact 41047812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 34623386 - 34623440
Alignment:
Q  232 gttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    ||||||| |||||| |||||||||||||||||||||| |||  | ||||||||||    
T  34623386 gttaactaccgaggatttcctcggcagttaactgcagccgatctcttaattcctc 34623440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 225 - 271
Target Start/End: Original strand, 36394937 - 36394983
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 271  Q
    ||||| |||||||| |||||||||||||||||| |||| ||||||||    
T  36394937 ctcggtagttaactaccgaggttttcctcggcacttaattgcagtcg 36394983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 38265533 - 38265476
Alignment:
Q  210 aaagtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||| ||| | |||||||||||| |||||||||||||| | ||||||||||||    
T  38265533 aaagtttgaa-tttccacggcagttaactgccgaggttttcctcagtagttaactgcag 38265476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 267
Target Start/End: Original strand, 40142648 - 40142702
Alignment:
Q  213 gtttgaagttttctcggcagttaacttccgaggttttcctcggcagttaactgca 267  Q
    |||||||||||||||||||||||| | | || |||||| |||| |||||||||||    
T  40142648 gtttgaagttttctcggcagttaattacagaagttttcttcggtagttaactgca 40142702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 230 - 268
Target Start/End: Complemental strand, 46596954 - 46596916
Alignment:
Q  230 cagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  46596954 cagttaactcccgaagttttcctcggcagttaactgcag 46596916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 7975608 - 7975649
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||| |||||| || |||||||||||||||||||||||||||    
T  7975608 ctcgacagttacctaccgaggttttcctcggcagttaactgc 7975649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 11629764 - 11629801
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  11629764 gcagttaactgccgaggttttcctcgacagttaactgc 11629801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 16674802 - 16674839
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  16674802 gcagttaactaccgaggatttcctcggcagttaactgc 16674839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 17649170 - 17649207
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  17649170 gcagttaactaccgaggatttcctcggcagttaactgc 17649207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 20564147 - 20564106
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||| ||||||| |||||||    
T  20564147 ctcggcagttaactaccgaggttttcttcggcagctaactgc 20564106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 37345143 - 37345106
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  37345143 gcagttaactcccgagattttcctcggcagttaactgc 37345106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 662 - 720
Alignment:
Q  135 acaatgaattaaatagtattagaatcaataaatattaataatgacaatataagattttt 193  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  662 acaatgaattaaatagtattagaatcaataaatattagtaatgacaatataaggttttt 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 46; Significance: 9e-17; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 905 - 808
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||  |||||||   || ||||||| | ||||| |||||| ||||||||    
T  905 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtatttta 808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 5405 - 5364
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  5405 ctcggcagttaactaccgaggttttcctcggcagttaactgc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 931 - 892
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaact 264  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  931 ctcggcagttaactaccgaggttttcctcggcagttaact 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 17350 - 17447
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| |||||| |||||||||||||||||||||| || ||||  ||||||||  || ||||||| | ||||| |||||| ||||||||    
T  17350 ctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 17447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 3951 - 3872
Alignment:
Q  233 ttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaa 312  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||| |||||||| ||| ||||||| | |||||| ||||    
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaa 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 433 - 550
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtattttatt 324  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||| || ||| ||||||| ||  || ||||||| | ||||   ||||| |||||||| |    
T  433 ctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtattttact 532  T
Q  325 aatgtttctcagtcttat 342  Q
      ||||||||||||||||    
T  533 cgtgtttctcagtcttat 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 7301 - 7382
Alignment:
Q  223 ttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagg 304  Q
    |||||||||||||||| |||||||||| |||||||||| | ||||| ||  |||| ||||||||| || |||||||||||||    
T  7301 ttctcggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaagg 7382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 422 - 463
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  422 ctcggcagttaactaccgaggttttcctcggcagttaactgc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 1180 - 1217
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaa 262  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1180 ctcggcagttaacttccgaggttttcctcggcagttaa 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 22477 - 22416
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctc 286  Q
    |||||||||||||| ||||| |||||||| |||||||||||||| |||||||  ||||||||    
T  22477 ctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctc 22416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 15617 - 15662
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  15617 ttttctcggcagttaactaccaaggttttcctcggcagttaactgc 15662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 36533 - 36586
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  36533 ctcggcagttaactaccgaggttttcctcggcagttaattgcagccggattttt 36586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 41021 - 41062
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  41021 ctcggcagttaactcccgaggttttcctcggcagttaactgc 41062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 50121 - 50080
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  50121 ctcggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 5345 - 5302
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  5345 ctcggcagttaactaccgaggttttcctcggtagttaactgcag 5302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 12387 - 12430
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  12387 ctcggcagttaactaccgaggttttcatcggcagttaactgcag 12430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 10726 - 10685
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  10726 ctcggcagttaactaccgaggtttccctcggcagttaactgc 10685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 18288 - 18343
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||||    
T  18288 ttttctcggcagttaactaccgaggttttcttcgacagtaaactgcagtcggattt 18343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Complemental strand, 18099 - 18024
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    |||||||| |||||| ||| |||||||||||||||||| ||  ||| |||||||||  || ||||||||| |||||    
T  18099 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggg 18024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 15954 - 15997
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  15954 ctcggaagttaactaccgaggttttcctcggcagttaactgcag 15997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 54556 - 54501
Alignment:
Q  221 ttttctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaattt 276  Q
    |||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||||    
T  54556 ttttctcggcagttaactaccgaggttttcttcgacagtaaactgcagtcggattt 54501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 306
Target Start/End: Original strand, 54745 - 54820
Alignment:
Q  231 agttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaagggg 306  Q
    |||||||| |||||| ||| |||||||||||||||||| ||  ||| |||||||||  || ||||||||| |||||    
T  54745 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggg 54820  T

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Target: scaffold0293 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 721 - 762
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  721 ctcggcagttaactaccgaggttttcctgggcagttaactgc 762  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 84654 - 84613
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||||| ||||||||    
T  84654 ctcggcagttaactaccgaggttttcctcggcacttaactgc 84613  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 235969 - 235933
Alignment:
Q  229 gcagttaacttccgaggttttcctcggcagttaactg 265  Q
    |||||||||| ||||||||||||||||||||||||||    
T  235969 gcagttaactaccgaggttttcctcggcagttaactg 235933  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 54639 - 54596
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  54639 ctcggcagttaactgtcgatgttttcctcggcagttaactgcag 54596  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 65392 - 65349
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcag 268  Q
    |||||||||||||| |||| |||||||||| |||||||||||||    
T  65392 ctcggcagttaactgccgaagttttcctcgacagttaactgcag 65349  T

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Target: scaffold0504 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 12465 - 12419
Alignment:
Q  217 gaagttttc-tcggcagttaacttccgaggttttcctcggcagttaa 262  Q
    ||||||||| |||| |||||||| |||||||||||||||||||||||    
T  12465 gaagttttcctcgggagttaactcccgaggttttcctcggcagttaa 12419  T

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Target: scaffold0634 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 7492 - 7451
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgc 266  Q
    |||||||||||||| |||||||||||||||| ||| ||||||    
T  7492 ctcggcagttaactaccgaggttttcctcggtagtcaactgc 7451  T

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Target: scaffold0388 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 13908 - 13965
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaatt 282  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||| ||  |||||||||    
T  13908 ctcggtagttaactgccgatgtttttctcggcagttaactgcagccgtgtttttaatt 13965  T

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Target: scaffold0361 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 4399 - 4496
Alignment:
Q  225 ctcggcagttaacttccgaggttttcctcggcagttaactgcagtcgaatttttaattcctcaacatttaactgtcaaggggataaaattgtatttta 322  Q
    |||||||||||||| |||||| ||||||||| | |||||||||| || | ||  ||||||||  || ||||||| | ||||  |||||| ||||||||    
T  4399 ctcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactgccgagggagtaaaatcgtatttta 4496  T

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