View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6259_low_22 (Length: 232)
Name: NF6259_low_22
Description: NF6259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6259_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 4503413 - 4503623
Alignment:
| Q |
1 |
accgggtctatattagataaccccttcaaactttatatgtattcgtgaattaaatagttataaagttactcacaaattgattgacctaaatttatcttag |
100 |
Q |
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| T |
4503413 |
accgggtctatattagataaccccttcaaactttatatgtattcgtgaattaaatagttataaagtaactcacatattgattgacctaaatttatcttag |
4503512 |
T |
|
| Q |
101 |
gttttgtgagctaagtgaattcacacctacaactaagattgagatcaagatattaatgaacttcaattaaagaacaatcttttgagagaacccaggttgt |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |
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| T |
4503513 |
gttttatgagctaagtgaattcacacctacaactaagattgagatcaagatattaatgaaattcaattaaagaacaatcttttgagagaacccaagttgt |
4503612 |
T |
|
| Q |
201 |
atcattactgg |
211 |
Q |
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||||||||||| |
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| T |
4503613 |
atcattactgg |
4503623 |
T |
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