View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6260_low_11 (Length: 237)
Name: NF6260_low_11
Description: NF6260
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6260_low_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 45438769 - 45438987
Alignment:
| Q |
16 |
ctaacatcatgtcaattcttccacaaactaatacctcatttcttcctaatgctttttgctacaaaccatcagaagatgtttctatgtcttcatcttcttt |
115 |
Q |
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| T |
45438769 |
ctaacatcatgtcaattcttccacaaactaatacctcatttcttcctaatgctttttgctacaaaccatcagaagatgtttctatgtcttcatcttcttt |
45438868 |
T |
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| Q |
116 |
ccctatgaagaatagtatcttatcttcttggggaattacagataattgtgacacctctattaaagagaatcaaacagaagaagaggaagaagaagccaag |
215 |
Q |
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| T |
45438869 |
ccctatgaagaatagtatcttatcttcttggggaattacag---attgtgacacctctattaaagagaatcaaacagaagaagaagaagaagaagccaag |
45438965 |
T |
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| Q |
216 |
tggaatgagtatcttcacaatc |
237 |
Q |
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| T |
45438966 |
tggaatgagtatcttcacaatc |
45438987 |
T |
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