View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6261_high_20 (Length: 237)
Name: NF6261_high_20
Description: NF6261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6261_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 33788225 - 33788436
Alignment:
| Q |
11 |
aaactccttttaactgaaatatatggttacttccgagcc-gtataattgcgtacactaattcatttaaaccagaccacagcaacaattgtttaagtccct |
109 |
Q |
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| T |
33788225 |
aaactccttttaactgaaacatgtggttactttcgagcctgtataattgcgtacattaattcatttgaaccagaccacagtaatatgtgtttaattccct |
33788324 |
T |
|
| Q |
110 |
taaccatttgattaagaatttgatctttgatttgttcgcatgaaaatatataatttaaaagagatcaacctcttaaatagattctaattattacctacat |
209 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
33788325 |
taaccatttgattaagaatttgatctttgattttttcgcatgaaaatatataatttaaaagagatcaacctcttaaatagattataattattacctacat |
33788424 |
T |
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| Q |
210 |
aaatcttttata |
221 |
Q |
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|||||||||||| |
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| T |
33788425 |
aaatcttttata |
33788436 |
T |
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