View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6261_low_22 (Length: 238)
Name: NF6261_low_22
Description: NF6261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6261_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 2354967 - 2354750
Alignment:
| Q |
1 |
atagccatgcttataggttgagttattttgtttttctgatcactcaattcagcttagtcaagctattggttctgtccaagcaattgccaaggtatcaaaa |
100 |
Q |
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| T |
2354967 |
atagccatgcttataggttgagttattttgtttttctgatcactcaattcagcttagtcaagctattggttctgtccaagcaattgccaaggtatcaaaa |
2354868 |
T |
|
| Q |
101 |
gagcaaattctggagaacacagatctttctactgacaaggcagaaatgatttcaaggtttctcagagacccaaagtcttacttacgtctcaagatcaact |
200 |
Q |
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| T |
2354867 |
gggcaaattctggagaacacagatctttctactgacaaggcagagatgatttcaaggtttctcagagacccaaagtcttacttacgtcccaagatcaact |
2354768 |
T |
|
| Q |
201 |
gatcacaaaataacaaag |
218 |
Q |
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|||||||||||||||||| |
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| T |
2354767 |
gatcacaaaataacaaag |
2354750 |
T |
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