View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6261_low_24 (Length: 234)
Name: NF6261_low_24
Description: NF6261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6261_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 51582501 - 51582293
Alignment:
| Q |
14 |
atcaggtgctttttgttaaattaacctatgttctgatgtcatatagaatatttacaggaagtccaaatatttttatcagatttatgttccatcctatatt |
113 |
Q |
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| T |
51582501 |
atcaggtactttttgttaaattaacctatgttctgatgtcatatagaatatttacaggaagtccaaatatttttatcagatttatgttccatcctatatt |
51582402 |
T |
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| Q |
114 |
ttagaaactgtcgcatgaagaaaacactcttatgcaaccaaataaatggtttcatcatagatttatctttgaatcttgtgatacagctttcctagtctaa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51582401 |
ttagaaactgtcgcatgaagaaaacactcttatgcaaccaaataaatggtttcatcatagatttatctttgaatcttgtgatacagctttcctagtctaa |
51582302 |
T |
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| Q |
214 |
ataattgat |
222 |
Q |
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| T |
51582301 |
ataattgat |
51582293 |
T |
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