View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6264-Insertion-9 (Length: 271)
Name: NF6264-Insertion-9
Description: NF6264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6264-Insertion-9 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 56378642 - 56378375
Alignment:
| Q |
7 |
atgttgtagttgaatggcatgatgatgtggccatgtccatgaggtggcgctacagctctagaaggaagaatgttgttgtt---acctgttgctgctgctg |
103 |
Q |
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| T |
56378642 |
atgttgtagttgaatggcatgatgatgtggccatgtccatgaggtggcgctacagctctagaaggaagaatgttgttgttgttacctgttgctgctgctg |
56378543 |
T |
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| Q |
104 |
atgctgtattaggaatagagtggtggtggtggtagccaagaccaagagcctgatcaggaagaggtaacatgaatttcctcatgctgtggtggtgctgctg |
203 |
Q |
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| T |
56378542 |
atgctgtattaggagtagagtggtggtggtggtagccaagaccaagagcctgatcaggaagaggtaacatgaatttcctcatgctgtggtggtgctgctg |
56378443 |
T |
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| Q |
204 |
tctgttgaagttgaaattgaaggctgagtgatggtggtagttctcctgatcctcagtctcaccttgga |
271 |
Q |
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| T |
56378442 |
tctgttgaagttgaagttgaaggctgagtgatggtggtagttctcctgatcctcagtctcaccttgga |
56378375 |
T |
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