View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6264_high_31 (Length: 299)
Name: NF6264_high_31
Description: NF6264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6264_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 281
Target Start/End: Complemental strand, 37609701 - 37609425
Alignment:
| Q |
16 |
attgtggcaaacagaataaagaaacagaggaaaacagagacattcggtgttctgttttcaacagaggccattgtgaccttgagaatttgaaaacacaaaa |
115 |
Q |
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| T |
37609701 |
attgtggcaaacagaataaagaaacagaggaaaacagagacattcggtgttctgttttcaacataagccattgtgaccttgagaatttgaaaacacaaaa |
37609602 |
T |
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| Q |
116 |
ataagtaaaaggttatgcttgtattgagtctgctactaaattatatatgtcatattagagggtgtaga-----------aacacattttttagtagcccg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37609601 |
ataagtaaaaggttatgcttgtattgagtctgctactaaattatatatgtcatattagagggtgtagaaaaatgctaataacacattttttagtagcccg |
37609502 |
T |
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| Q |
205 |
tgatgggtgttgggagtgaaagaaagaggactctattatatgtagttgcttttggaagagagtgacaacatgggaag |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37609501 |
tgatgggtgttgggagtgaaagaaagaggactctattatatgtagttgcttttggaagagagtgacaacatgggaag |
37609425 |
T |
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