View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6264_low_17 (Length: 394)
Name: NF6264_low_17
Description: NF6264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6264_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 44837669 - 44837290
Alignment:
| Q |
1 |
aactggcaaaaatttagctagttttgctgaatcattgaacttgccctttttatataaacctgttttagtagaagatatgttggaaatcaaagaggatgat |
100 |
Q |
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| T |
44837669 |
aactggcaaaaatttagctagttttgctgaatcattgaacttgccctttttatataaacctgttttagtagaagatatgttggaaatcaaagaggatgat |
44837570 |
T |
|
| Q |
101 |
tttgaaattgaaaaggatgaagctgttgctgtttattctccatattttctaaggactttaatatcaaagcaagattgtatggaaaatttgatgagggttt |
200 |
Q |
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| T |
44837569 |
tttgaaattgaaaaggatgaagctgttgctgtttattctccatattttctaaggactttaatatcaaagcaagattgtatggaaaatttgatgagggttt |
44837470 |
T |
|
| Q |
201 |
tgagagatatcaaaccatgtataatgatagtacttgaaactgaagcaagtcttaattcgcagtcttttgtgaaccgattcgttgaagcgttgttcttcta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44837469 |
tgagagatatcaaaccatgtataatgatagtacttgaaactgaagcaagtcttaattcgcagtcttttgtgaaccgattcgttgaagcgttgttcttcta |
44837370 |
T |
|
| Q |
301 |
ctcggcttttttcgatatggctgaaacatgtatgagcgaggaggatgagtgtagaatgataacagaaggaatactatctg |
380 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44837369 |
ctcggcttttttcgatatggctgaaacatgtatgagcgaggaggatgagtgtagaatgataacagaaggaatactatctg |
44837290 |
T |
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