View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6264_low_26 (Length: 314)
Name: NF6264_low_26
Description: NF6264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6264_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 13 - 296
Target Start/End: Original strand, 8854133 - 8854419
Alignment:
| Q |
13 |
aaaataaataacataattctaggtcattaataaacattaagaaaggnnnnnnnnnncctccattacaatttctaacaacctatgaatcatacagcttctt |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
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| T |
8854133 |
aaaataaataacataattctaggtcattaataaacattaagaaaggaaaaaaaaaac-tccattacaatttctaacaacctatgaatcatacagcttctt |
8854231 |
T |
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| Q |
113 |
gaagattcttaacaaactcaggtagctcagttgagtcaacttctgttggggcatctcctgttgccattaccataacatcacgagcaatctttcgatctga |
212 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8854232 |
gaagattcttaacaaactcaggtagttcagttgagtcaacttctgttggtgcatctcctgttgccattaccataacatcacgagcaatctttcgatctga |
8854331 |
T |
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| Q |
213 |
aaaacataaaacataaatattaactttc----ttcctaggtaatatcaagccctagaagaagtaagcaatatagatggaggtaatttg |
296 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8854332 |
aaaacataaaacataaatattaactttcttcattcctaggtaatatcaagccctagaagaagtaagcaatatagatggaggtaatttg |
8854419 |
T |
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