View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6264_low_39 (Length: 260)
Name: NF6264_low_39
Description: NF6264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6264_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 34875329 - 34875093
Alignment:
| Q |
1 |
ttttcttctttccgtacgtaggggaaggggctgcatatataaatatcattacgatcatgtctcattaattagacgtgaatgatctactaatatgtaacca |
100 |
Q |
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| T |
34875329 |
ttttcttctttccgtacgtagggg------ctgcatatataaatatcattacgatcatgtctcattaattagacgtgaatgatctactaatatgcaacca |
34875236 |
T |
|
| Q |
101 |
acctaccatgcacctaaattaatagtaaaacggagactttaatataattgcatgttgaaatcttcaatactataactattgatattataattaatatgtc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
34875235 |
acctaccatgcacctaaattaatagtaaaacggagactttaatataattgcatgttgaaatcttcaatactataactattgatgttataattaatatgtc |
34875136 |
T |
|
| Q |
201 |
tgggtgagtgattatccattattcaaatcttttactaagtcta |
243 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||| |
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| T |
34875135 |
tgggtgagtgattatccattattcaaattttttactaagtcta |
34875093 |
T |
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