View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6264_low_44 (Length: 247)
Name: NF6264_low_44
Description: NF6264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6264_low_44 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 30791839 - 30791617
Alignment:
| Q |
16 |
aataacaccaatagcagcttttctgcatcaaccttcagaagtctcggttgcacagccggtacatcacaacaagtgtctgtaccggcagtgattcgatcct |
115 |
Q |
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| T |
30791839 |
aataacaccaatagcagcttttctgcatcaaccttcagaagtctcggttgcacagccggtacatcacaacaagtgtctgtaccggcagtgattcgatcct |
30791740 |
T |
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| Q |
116 |
ctgcagattggcaagggaagaagaacaggaaaaagaagaacagaaggaacaaaacatgtcatggtgttgatgatgtggattttcaggatgtttggtgtgg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30791739 |
ctgcagattggcaagggaagaagaacaggaaaaagaagaacagaaggaacaaaacatgtcatggtgttgatgatgtggattttcaggatgtttggtgtgg |
30791640 |
T |
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| Q |
216 |
acctggaactggattcttatctg |
238 |
Q |
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||||||||||||||||||||||| |
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| T |
30791639 |
acctggaactggattcttatctg |
30791617 |
T |
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