View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6265_high_8 (Length: 266)

Name: NF6265_high_8
Description: NF6265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6265_high_8
NF6265_high_8
[»] scaffold0381 (2 HSPs)
scaffold0381 (151-256)||(3248-3353)
scaffold0381 (41-79)||(3425-3463)
[»] chr4 (38 HSPs)
chr4 (151-256)||(27016431-27016536)
chr4 (1-40)||(26625997-26626036)
chr4 (41-79)||(27016321-27016359)
chr4 (1-47)||(30771524-30771570)
chr4 (1-38)||(32899213-32899250)
chr4 (1-46)||(47806857-47806902)
chr4 (1-46)||(52977979-52978024)
chr4 (1-38)||(55563122-55563159)
chr4 (1-40)||(4035828-4035867)
chr4 (1-40)||(5375552-5375591)
chr4 (1-40)||(9328235-9328274)
chr4 (1-40)||(32032988-32033027)
chr4 (1-40)||(34273214-34273253)
chr4 (1-40)||(44294792-44294831)
chr4 (1-40)||(45742801-45742840)
chr4 (1-43)||(4549884-4549926)
chr4 (1-43)||(37352544-37352586)
chr4 (1-43)||(37357443-37357485)
chr4 (1-43)||(50424849-50424891)
chr4 (1-47)||(53277180-53277226)
chr4 (1-38)||(375429-375466)
chr4 (7-40)||(5743660-5743693)
chr4 (1-38)||(20455176-20455213)
chr4 (1-46)||(25708673-25708718)
chr4 (1-38)||(31937081-31937118)
chr4 (7-40)||(33413521-33413554)
chr4 (9-50)||(35675923-35675964)
chr4 (1-38)||(36130085-36130122)
chr4 (1-38)||(36901105-36901142)
chr4 (1-38)||(37518009-37518046)
chr4 (1-38)||(37522225-37522262)
chr4 (1-38)||(47228723-47228760)
chr4 (1-38)||(49373688-49373725)
chr4 (1-38)||(49793096-49793133)
chr4 (1-38)||(56432523-56432560)
chr4 (10-46)||(4549626-4549662)
chr4 (9-45)||(37842173-37842209)
chr4 (7-43)||(41620514-41620550)
[»] chr7 (22 HSPs)
chr7 (1-49)||(39197712-39197760)
chr7 (1-45)||(40300228-40300272)
chr7 (1-38)||(33381568-33381605)
chr7 (1-45)||(26255094-26255138)
chr7 (1-40)||(19920566-19920605)
chr7 (1-40)||(21295154-21295193)
chr7 (1-40)||(29286032-29286071)
chr7 (1-40)||(32814436-32814475)
chr7 (1-40)||(32872370-32872409)
chr7 (1-40)||(33858861-33858900)
chr7 (1-40)||(36698126-36698165)
chr7 (1-40)||(38858301-38858340)
chr7 (1-40)||(41026091-41026130)
chr7 (1-40)||(41252356-41252395)
chr7 (1-40)||(48521032-48521071)
chr7 (1-51)||(31457989-31458039)
chr7 (1-43)||(31769327-31769369)
chr7 (1-38)||(2290011-2290048)
chr7 (1-38)||(34012512-34012549)
chr7 (7-40)||(39871614-39871647)
chr7 (1-37)||(9140528-9140564)
chr7 (10-46)||(38428411-38428447)
[»] chr5 (19 HSPs)
chr5 (1-49)||(19571934-19571982)
chr5 (1-40)||(7951565-7951604)
chr5 (1-47)||(1265945-1265991)
chr5 (1-40)||(6673223-6673262)
chr5 (1-40)||(9828396-9828435)
chr5 (1-40)||(14913651-14913690)
chr5 (1-40)||(16127262-16127301)
chr5 (1-40)||(22527695-22527734)
chr5 (1-40)||(26894868-26894907)
chr5 (1-40)||(34662207-34662246)
chr5 (1-40)||(40004404-40004443)
chr5 (1-43)||(32478138-32478180)
chr5 (1-38)||(8284102-8284139)
chr5 (9-46)||(10734526-10734563)
chr5 (1-38)||(23286469-23286506)
chr5 (1-38)||(32964138-32964175)
chr5 (1-38)||(43060406-43060443)
chr5 (1-33)||(13735668-13735700)
chr5 (1-37)||(27873340-27873376)
[»] chr3 (35 HSPs)
chr3 (1-40)||(4024055-4024094)
chr3 (1-38)||(44542468-44542505)
chr3 (7-48)||(46049987-46050028)
chr3 (1-45)||(10220931-10220975)
chr3 (1-45)||(21756484-21756528)
chr3 (1-40)||(9499492-9499531)
chr3 (1-40)||(12050387-12050426)
chr3 (1-40)||(22103924-22103963)
chr3 (1-40)||(25149117-25149156)
chr3 (1-40)||(26593760-26593799)
chr3 (7-38)||(30819883-30819914)
chr3 (1-40)||(35868078-35868117)
chr3 (1-40)||(43868106-43868145)
chr3 (1-40)||(45252776-45252815)
chr3 (1-40)||(51284057-51284096)
chr3 (7-45)||(14428608-14428646)
chr3 (1-47)||(26806373-26806419)
chr3 (1-38)||(4759346-4759383)
chr3 (7-40)||(7181353-7181386)
chr3 (1-38)||(8321930-8321967)
chr3 (1-38)||(8503500-8503537)
chr3 (1-38)||(20918224-20918261)
chr3 (1-38)||(20927186-20927223)
chr3 (1-38)||(24087330-24087367)
chr3 (1-38)||(26058551-26058588)
chr3 (1-46)||(36098963-36099008)
chr3 (7-40)||(37728716-37728749)
chr3 (1-38)||(41392875-41392912)
chr3 (7-40)||(44543785-44543818)
chr3 (1-38)||(46703032-46703069)
chr3 (1-38)||(46845487-46845524)
chr3 (1-37)||(1572337-1572373)
chr3 (10-46)||(9779976-9780012)
chr3 (11-55)||(33212662-33212706)
chr3 (1-53)||(53361850-53361902)
[»] chr8 (24 HSPs)
chr8 (1-46)||(1774339-1774384)
chr8 (1-46)||(28192170-28192215)
chr8 (1-46)||(44502617-44502662)
chr8 (1-45)||(2944267-2944311)
chr8 (1-40)||(51090-51129)
chr8 (1-40)||(8251928-8251967)
chr8 (1-40)||(8951423-8951462)
chr8 (1-40)||(13153931-13153970)
chr8 (1-40)||(18754147-18754186)
chr8 (1-40)||(28572049-28572088)
chr8 (1-40)||(28579642-28579681)
chr8 (1-40)||(34568493-34568532)
chr8 (1-47)||(41014500-41014546)
chr8 (1-38)||(2152235-2152272)
chr8 (1-38)||(5162309-5162346)
chr8 (1-46)||(8948346-8948391)
chr8 (1-38)||(18641375-18641412)
chr8 (1-38)||(30512773-30512810)
chr8 (7-40)||(32675758-32675791)
chr8 (7-40)||(39029181-39029214)
chr8 (1-45)||(9035534-9035578)
chr8 (1-37)||(33865536-33865572)
chr8 (1-45)||(36177098-36177142)
chr8 (1-45)||(44251116-44251160)
[»] chr6 (19 HSPs)
chr6 (1-50)||(231100-231149)
chr6 (1-40)||(4844403-4844442)
chr6 (1-40)||(8743191-8743230)
chr6 (1-40)||(13648124-13648163)
chr6 (1-40)||(30248650-30248689)
chr6 (1-40)||(34301827-34301866)
chr6 (1-38)||(402616-402653)
chr6 (1-38)||(2090663-2090700)
chr6 (1-46)||(6147380-6147425)
chr6 (1-38)||(7847303-7847340)
chr6 (9-46)||(11847835-11847872)
chr6 (1-38)||(15498634-15498671)
chr6 (1-38)||(23282800-23282837)
chr6 (1-38)||(25045638-25045675)
chr6 (1-38)||(34915538-34915575)
chr6 (1-45)||(925928-925972)
chr6 (2-38)||(13901646-13901682)
chr6 (7-43)||(17227528-17227564)
chr6 (8-40)||(23398141-23398173)
[»] chr2 (20 HSPs)
chr2 (1-46)||(2438222-2438267)
chr2 (1-40)||(7491847-7491886)
chr2 (1-40)||(8716887-8716926)
chr2 (1-40)||(17408289-17408328)
chr2 (1-40)||(34062660-34062699)
chr2 (1-40)||(34883843-34883882)
chr2 (1-40)||(36131023-36131062)
chr2 (1-40)||(41450519-41450558)
chr2 (10-47)||(2438489-2438526)
chr2 (1-38)||(8912869-8912906)
chr2 (7-40)||(11201686-11201719)
chr2 (1-38)||(13598527-13598564)
chr2 (7-40)||(20252213-20252246)
chr2 (10-47)||(22897655-22897692)
chr2 (1-38)||(26322288-26322325)
chr2 (7-40)||(27560209-27560242)
chr2 (9-46)||(34113789-34113826)
chr2 (7-40)||(40607705-40607738)
chr2 (11-43)||(16456612-16456644)
chr2 (7-47)||(23788965-23789005)
[»] chr1 (28 HSPs)
chr1 (1-46)||(943632-943677)
chr1 (1-46)||(15811227-15811272)
chr1 (1-46)||(39363189-39363234)
chr1 (1-46)||(44649626-44649671)
chr1 (1-46)||(49907018-49907063)
chr1 (1-49)||(37951944-37951992)
chr1 (1-40)||(1039376-1039415)
chr1 (1-40)||(1046282-1046321)
chr1 (1-40)||(4102709-4102748)
chr1 (1-40)||(11741400-11741439)
chr1 (1-40)||(23541982-23542021)
chr1 (1-40)||(30289857-30289896)
chr1 (7-46)||(30290262-30290301)
chr1 (1-40)||(36694857-36694896)
chr1 (1-40)||(36710958-36710997)
chr1 (1-40)||(39497436-39497475)
chr1 (1-40)||(45039415-45039454)
chr1 (1-40)||(52431169-52431208)
chr1 (1-38)||(7763744-7763781)
chr1 (7-40)||(13343776-13343809)
chr1 (1-38)||(25509214-25509251)
chr1 (1-38)||(27037274-27037311)
chr1 (10-47)||(39497697-39497734)
chr1 (9-50)||(42872337-42872378)
chr1 (1-38)||(43456616-43456653)
chr1 (1-46)||(44646268-44646313)
chr1 (7-40)||(46075868-46075901)
chr1 (1-45)||(14171540-14171584)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-48)||(5146-5193)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-40)||(3777-3816)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-48)||(10177-10224)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-48)||(18492-18539)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-48)||(3433-3480)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-40)||(12068-12107)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-40)||(51677-51716)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-40)||(47643-47682)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-40)||(259117-259156)
[»] scaffold0368 (1 HSPs)
scaffold0368 (9-50)||(8211-8252)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-38)||(7135-7172)
[»] scaffold0163 (1 HSPs)
scaffold0163 (1-38)||(1441-1478)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-38)||(48659-48696)


Alignment Details
Target: scaffold0381 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 151 - 256
Target Start/End: Complemental strand, 3353 - 3248
Alignment:
Q  151 agtttaatgtttaatttcaacatttcctaaaacgcaaatatttaattggtgaactaaaaatgtataggaacaaggtattaatttatggcagggttctcaa 250  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3353 agtttaatgattaatttcaacatttcctaaaacgcaaatatttaattggtgaactaaaaatgtataggaacaaggtattaatttatggcagggttctcaa 3254  T
Q  251 gtatta 256  Q
    ||||||    
T  3253 gtatta 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 3463 - 3425
Alignment:
Q  41 ataataaaataaaattacttcaacataaaaccgcacatg 79  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  3463 ataataaaataaaattacttcaacataaaaccacacatg 3425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 151 - 256
Target Start/End: Original strand, 27016431 - 27016536
Alignment:
Q  151 agtttaatgtttaatttcaacatttcctaaaacgcaaatatttaattggtgaactaaaaatgtataggaacaaggtattaatttatggcagggttctcaa 250  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27016431 agtttaatgattaatttcaacatttcctaaaacgcaaatatttaattggtgaactaaaaatgtataggaacaaggtattaatttatggcagggttctcaa 27016530  T
Q  251 gtatta 256  Q
    ||||||    
T  27016531 gtatta 27016536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26625997 - 26626036
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  26625997 aaaaaatctcaaaagggtcttataattagggacggaggga 26626036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 27016321 - 27016359
Alignment:
Q  41 ataataaaataaaattacttcaacataaaaccgcacatg 79  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  27016321 ataataaaataaaattacttcaacataaaaccacacatg 27016359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30771570 - 30771524
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataa 47  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  30771570 aaaaattctcaaaagggtcttataattagggacggagggagtaataa 30771524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32899213 - 32899250
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32899213 aaaaaatctcaaaagggtcttataattagggacggagg 32899250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47806902 - 47806857
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  47806902 aaaaattctcaaaagggtcttataattagggacggagggagtaata 47806857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52978024 - 52977979
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  52978024 aaaaattctcaaaagggtcttataattagggacggagggagtaata 52977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 55563122 - 55563159
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  55563122 aaaaaatctcaaaagggtcttataattagggacggagg 55563159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4035867 - 4035828
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  4035867 aaaaattctcaaaagggtcttataattagggacggaggga 4035828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 5375552 - 5375591
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  5375552 aaaaattctcaaaagggtcttataattagggacggaggga 5375591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9328235 - 9328274
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  9328235 aaaaattctcaaaagggtcttataattagggacggaggga 9328274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32032988 - 32033027
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  32032988 aaaaattctcaaaagggtcttataattagggacggaggga 32033027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34273214 - 34273253
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34273214 aaaaattctcaaaagggtcttataattagggacggaggga 34273253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 44294831 - 44294792
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  44294831 aaaaattctcaaaagggtcttataattagggacggaggga 44294792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45742801 - 45742840
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  45742801 aaaaattctcaaaagggtcttataattagggacggaggga 45742840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4549884 - 4549926
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaata 43  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||    
T  4549884 aaaaattctcaaaagagtcttataattagggacggagggaata 4549926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37352586 - 37352544
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaata 43  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||    
T  37352586 aaaaattctcaaaagggtcttataattaaggacggagggaata 37352544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37357485 - 37357443
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaata 43  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||    
T  37357485 aaaaattctcaaaagggtcttataattaaggacggagggaata 37357443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 50424849 - 50424891
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaata 43  Q
    ||||| |||||||||||||||||| |||| |||||||||||||    
T  50424849 aaaaattctcaaaagggtcttataattagagacggagggaata 50424891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 53277180 - 53277226
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataa 47  Q
    ||||| ||| |||||||||||||| ||||||||||||||| ||||||    
T  53277180 aaaaattcttaaaagggtcttataattagggacggagggagtaataa 53277226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 375466 - 375429
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  375466 aaaaaatctcaaaagggtcttataattaaggacggagg 375429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 5743660 - 5743693
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  5743660 tctcaaaagggtcttataattagggacggaggga 5743693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20455176 - 20455213
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  20455176 aaaaattctcaaaagggtcttataattagggacggagg 20455213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25708673 - 25708718
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||| ||||||||| ||||||||||||||| |||||    
T  25708673 aaaaattctcaaaaaggtcttataattagggacggagggagtaata 25708718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31937118 - 31937081
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  31937118 aaaaattctcaaaagggtcttataattagggacggagg 31937081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 33413554 - 33413521
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  33413554 tctcaaaagggtcttataattagggacggaggga 33413521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 35675923 - 35675964
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataataaaat 50  Q
    |||||||||||||||| ||||||||||||||| |||| ||||    
T  35675923 tcaaaagggtcttataattagggacggagggagtaattaaat 35675964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36130085 - 36130122
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  36130085 aaaaaatctcaaaagggtcttataattaggaacggagg 36130122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36901105 - 36901142
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  36901105 aaaaaatctcaaaaggatcttataattagggacggagg 36901142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37518046 - 37518009
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  37518046 aaaaaatctcaaaagggtcttataattaggaacggagg 37518009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37522262 - 37522225
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  37522262 aaaaaatctcaaaagggtcttataattaggaacggagg 37522225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47228723 - 47228760
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  47228723 aaaaattctcaaaagggtcttataattagggacggagg 47228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49373688 - 49373725
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  49373688 aaaaattctcaaaagggtcttataattagggacggagg 49373725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49793133 - 49793096
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  49793133 aaaaattctcaaaagggtcttataattagggacggagg 49793096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 56432560 - 56432523
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  56432560 aaaaattctcaaaagggtcttataattagggacggagg 56432523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 4549662 - 4549626
Alignment:
Q  10 caaaagggtcttatagttagggacggagggaataata 46  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  4549662 caaaagggtcttataattagggacggagggagtaata 4549626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 37842209 - 37842173
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  37842209 tcaaaagagtcttataattagggacggagggaataat 37842173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 41620550 - 41620514
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagggaata 43  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  41620550 tctcaaaagggtcttataattagggacggaggtaata 41620514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39197760 - 39197712
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaaa 49  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  39197760 aaaaattctcaaaagggtcttataattagggacggagggagtaataaaa 39197712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40300272 - 40300228
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  40300272 aaaaaatctcaaaagggtcttataattagggacggagggagtaat 40300228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33381568 - 33381605
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  33381568 aaaaaatctcaaaagggtcttataattagggacggagg 33381605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26255138 - 26255094
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  26255138 aaaaattctcaaaagggtcttataattagggacggagggagtaat 26255094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19920605 - 19920566
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  19920605 aaaaattctcaaaagggtcttataattagggacggaggga 19920566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21295193 - 21295154
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  21295193 aaaaattctcaaaagggtcttataattagggacggaggga 21295154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 29286032 - 29286071
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  29286032 aaaaattctcaaaagggtcttataattagggacggaggga 29286071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32814475 - 32814436
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  32814475 aaaaattctcaaaagggtcttataattagggacggaggga 32814436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32872370 - 32872409
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  32872370 aaaaattctcaaaagggtcttataattagggacggaggga 32872409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 33858861 - 33858900
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  33858861 aaaaattctcaaaagggtcttataattagggacggaggga 33858900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36698126 - 36698165
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  36698126 aaaaattctcaaaagggtcttataattagggacggaggga 36698165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 38858340 - 38858301
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  38858340 aaaaattctcaaaagggtcttataattagggacggaggga 38858301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41026091 - 41026130
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  41026091 aaaaattctcaaaagggtcttataattagggacggaggga 41026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41252356 - 41252395
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  41252356 aaaaattctcaaaagggtcttataattagggacggaggga 41252395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48521071 - 48521032
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  48521071 aaaaattctcaaaagggtcttataattagggacggaggga 48521032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31458039 - 31457989
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaaata 51  Q
    ||||| |||||||||||||||||| ||||||||||||| | ||||| ||||    
T  31458039 aaaaattctcaaaagggtcttataattagggacggaggaagtaatataata 31457989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31769327 - 31769369
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaata 43  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||    
T  31769327 aaaaattctcaaaagggtcttataattagggacggaggtaata 31769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2290011 - 2290048
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  2290011 aaaaattctcaaaagggtcttataattagggacggagg 2290048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34012512 - 34012549
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  34012512 aaaaattctcaaaagggtcttataattagggacggagg 34012549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 39871614 - 39871647
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  39871614 tctcaaaagggtcttataattagggacggaggga 39871647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9140528 - 9140564
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggag 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  9140528 aaaaattctcaaaagggtcttataattagggacggag 9140564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 38428411 - 38428447
Alignment:
Q  10 caaaagggtcttatagttagggacggagggaataata 46  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  38428411 caaaagggtcttataattagggacggagggagtaata 38428447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19571934 - 19571982
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaaa 49  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  19571934 aaaaaatctcaaaagggtcttataattagggacggaggtagtaataaaa 19571982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7951604 - 7951565
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  7951604 aaaaaatctcaaaagggtcttataattagggacggaggga 7951565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1265991 - 1265945
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataa 47  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  1265991 aaaaattctcaaaagggtcttataattagggacggagggagtaataa 1265945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 6673223 - 6673262
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  6673223 aaaaattctcaaaagggtcttataattagggacggaggga 6673262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9828435 - 9828396
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  9828435 aaaaattctcaaaagggtcttataattagggacggaggga 9828396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14913690 - 14913651
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  14913690 aaaaattctcaaaagggtcttataattagggacggaggga 14913651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16127301 - 16127262
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  16127301 aaaaattctcaaaagggtcttataattagggacggaggga 16127262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22527734 - 22527695
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  22527734 aaaaattctcaaaagggtcttataattagggacggaggga 22527695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26894868 - 26894907
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  26894868 aaaaattctcaaaagggtcttataattagggacggaggga 26894907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34662246 - 34662207
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34662246 aaaaactctcaaaagggtcttataattagggacggaggga 34662207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40004404 - 40004443
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  40004404 aaaaattctcaaaagggtcttataattagggacggaggga 40004443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32478180 - 32478138
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaata 43  Q
    ||||| |||||||||||||||||| |||||||||||| |||||    
T  32478180 aaaaattctcaaaagggtcttataattagggacggagagaata 32478138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8284102 - 8284139
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  8284102 aaaaaatctcaaaagggttttataattagggacggagg 8284139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 10734526 - 10734563
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataata 46  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  10734526 tcaaaagggtcttataattagggacggagggagtaata 10734563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23286469 - 23286506
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23286469 aaaaattctcaaaagggtcttataattagggacggagg 23286506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32964175 - 32964138
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  32964175 aaaaaatctcaaaatggtcttataattagggacggagg 32964138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43060406 - 43060443
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  43060406 aaaaattctcaaaagggtcttataattagggacggagg 43060443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13735700 - 13735668
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  13735700 aaaaaatctcaaaagggtcttataattagggac 13735668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27873340 - 27873376
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggag 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  27873340 aaaaattctcaaaagggtcttataattagggacggag 27873376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4024094 - 4024055
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  4024094 aaaaaatctcaaaagggtcttataattagggacggaggga 4024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44542468 - 44542505
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  44542468 aaaaaatctcaaaagggtcttataattagggacggagg 44542505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 46049987 - 46050028
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagggaataataaa 48  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  46049987 tctcaaaagggtcttataattagggacggagggagtaataaa 46050028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10220975 - 10220931
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  10220975 aaaaattctcaaaagggtcttataattagggacggagggagtaat 10220931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21756528 - 21756484
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  21756528 aaaaattctcaaaagggtcttataattagggacggagggagtaat 21756484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9499492 - 9499531
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  9499492 aaaaattctcaaaagggtcttataattagggacggaggga 9499531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 12050387 - 12050426
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  12050387 aaaaattctcaaaagggtcttataattagggacggaggga 12050426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22103924 - 22103963
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  22103924 aaaaattctcaaaagggtcttataattagggacggaggga 22103963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 25149117 - 25149156
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  25149117 aaaaattctcaaaagggtcttataattagggacggaggga 25149156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26593760 - 26593799
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  26593760 aaaaattctcaaaagggtcttataattagggacggaggga 26593799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 38
Target Start/End: Complemental strand, 30819914 - 30819883
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagg 38  Q
    ||||||||||||||||||||||||||||||||    
T  30819914 tctcaaaagggtcttatagttagggacggagg 30819883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 35868078 - 35868117
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  35868078 aaaaattctcaaaagggtcttataattagggacggaggga 35868117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 43868145 - 43868106
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  43868145 aaaaattctcaaaagggtcttataattagggacggaggga 43868106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45252815 - 45252776
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  45252815 aaaaattctcaaaagggtcttataattagggacggaggga 45252776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 51284057 - 51284096
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  51284057 aaaaattctcaaaagggtcttataattagggacggaggga 51284096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 14428646 - 14428608
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagggaataat 45  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  14428646 tctcaaaagggtcttataattagggacggagggagtaat 14428608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26806373 - 26806419
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataa 47  Q
    |||||||||||||||| ||||||| ||||||||||| ||| ||||||    
T  26806373 aaaaaatctcaaaaggctcttataattagggacggaaggagtaataa 26806419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4759346 - 4759383
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  4759346 aaaaattctcaaaagggtcttataattagggacggagg 4759383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 7181386 - 7181353
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  7181386 tctcaaaagggtcttataattagggacggaggga 7181353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8321967 - 8321930
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  8321967 aaaaattctcaaaagggtcttataattagggacggagg 8321930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8503500 - 8503537
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  8503500 aaaaattctcaaaagggtcttatatttagggacggagg 8503537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20918261 - 20918224
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  20918261 aaaaattctcaaaagggtcttataattagggacggagg 20918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20927223 - 20927186
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  20927223 aaaaattctcaaaagggtcttataattagggacggagg 20927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24087330 - 24087367
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  24087330 aaaaattctcaaaagggtcttataattagggacggagg 24087367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26058588 - 26058551
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  26058588 aaaaattctcaaaagggtcttataattagggacggagg 26058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36099008 - 36098963
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||| ||| |||||    
T  36099008 aaaaattctcaaaagggtcttataattagggacggatggagtaata 36098963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 37728749 - 37728716
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  37728749 tctcaaaagggtcttataattagggacggaggga 37728716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41392875 - 41392912
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  41392875 aaaaattctcaaaagggtcttataattagggacggagg 41392912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 44543818 - 44543785
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  44543818 tctcaaaagggtcttataattagggacggaggga 44543785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46703069 - 46703032
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  46703069 aaaaattctcaaaagggtcttataattagggacggagg 46703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 46845487 - 46845524
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  46845487 aaaaattctcaaaagggtcttataattagggacggagg 46845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1572373 - 1572337
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggag 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  1572373 aaaaattctcaaaagggtcttataattagggacggag 1572337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 9780012 - 9779976
Alignment:
Q  10 caaaagggtcttatagttagggacggagggaataata 46  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  9780012 caaaagggtcttataattagggacggagggagtaata 9779976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 33212662 - 33212706
Alignment:
Q  11 aaaagggtcttatagttagggacggagggaataataaaataaaat 55  Q
    |||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  33212662 aaaaggatcttataattagggacggaggtaataaaaaaataaaat 33212706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 53361850 - 53361902
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaaataaa 53  Q
    ||||| |||||||| ||||||||| ||||||||||||||| || || ||||||    
T  53361850 aaaaattctcaaaatggtcttataattagggacggagggagtattagaataaa 53361902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1774384 - 1774339
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  1774384 aaaaattctcaaaagggtcttataattagggacggagggagtaata 1774339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28192170 - 28192215
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  28192170 aaaaattctcaaaagggtcttataattagggacggagggagtaata 28192215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44502662 - 44502617
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||    
T  44502662 aaaaaatctcaaaaggatcttataattagggacggagggagtaata 44502617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2944267 - 2944311
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  2944267 aaaaattctcaaaagggtcttataattagggacggagggagtaat 2944311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 51090 - 51129
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  51090 aaaaattctcaaaagggtcttataattagggacggaggga 51129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8251928 - 8251967
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  8251928 aaaaattctcaaaagggtcttataattagggacggaggga 8251967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8951423 - 8951462
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  8951423 aaaaattctcaaaagggtcttataattagggacggaggga 8951462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13153970 - 13153931
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  13153970 aaaaattctcaaaagggtcttataattagggacggaggga 13153931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 18754186 - 18754147
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  18754186 aaaaattctcaaaagggtcttataattagggacggaggga 18754147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28572088 - 28572049
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  28572088 aaaaattctcaaaagggtcttataattagggacggaggga 28572049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28579681 - 28579642
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  28579681 aaaaattctcaaaagggtcttataattagggacggaggga 28579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 34568532 - 34568493
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34568532 aaaaattctcaaaagggtcttataattagggacggaggga 34568493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41014546 - 41014500
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataa 47  Q
    |||||||||||||| | ||||||| ||||||||||||||| ||||||    
T  41014546 aaaaaatctcaaaaagatcttataattagggacggagggagtaataa 41014500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2152235 - 2152272
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  2152235 aaaaattctcaaaagggtcttataattagggacggagg 2152272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5162346 - 5162309
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  5162346 aaaaattctcaaaagggtcttataattagggacggagg 5162309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8948346 - 8948391
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||| ||| |||||    
T  8948346 aaaaattctcaaaagggtcttataattagggacggatggagtaata 8948391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18641375 - 18641412
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  18641375 aaaaattctcaaaagggtcttataattagggacggagg 18641412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30512810 - 30512773
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  30512810 aaaaattctcaaaagggtcttatagttagggacagagg 30512773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 32675758 - 32675791
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  32675758 tctcaaaagggtcttataattagggacggaggga 32675791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 39029214 - 39029181
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  39029214 tctcaaaagggtcttataattagggacggaggga 39029181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9035534 - 9035578
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||| ||||||||| ||||||||||||||| ||||    
T  9035534 aaaaattctcaaaatggtcttataattagggacggagggagtaat 9035578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33865536 - 33865572
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggag 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  33865536 aaaaattctcaaaagggtcttataattagggacggag 33865572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 36177098 - 36177142
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||    
T  36177098 aaaaattctcaaaagagtcttataattagggacggagggagtaat 36177142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44251116 - 44251160
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||| ||||||||| ||||||||||||||| ||||    
T  44251116 aaaaattctcaaaatggtcttataattagggacggagggagtaat 44251160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 231100 - 231149
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaaat 50  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||| |||||    
T  231100 aaaaattctcaaaagggtcttataattagggacggagggagtaaaaaaat 231149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4844442 - 4844403
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  4844442 aaaaattctcaaaagggtcttataattagggacggaggga 4844403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8743230 - 8743191
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  8743230 aaaaattctcaaaagggtcttataattagggacggaggga 8743191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13648124 - 13648163
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  13648124 aaaaaatctcaaaagggtcttataattaaggacggaggga 13648163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30248689 - 30248650
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  30248689 aaaaattctcaaaagggtcttataattagggacggaggga 30248650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34301827 - 34301866
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34301827 aaaaattctcaaaagggtcttataattagggacggaggga 34301866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 402616 - 402653
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  402616 aaaaattctcaaaagggtcttataattagggacggagg 402653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2090700 - 2090663
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  2090700 aaaaattctcaaaagggtcttataattagggacggagg 2090663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6147425 - 6147380
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||| ||||||||| |||||    
T  6147425 aaaaattctcaaaagggtcttataattaggaacggagggactaata 6147380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7847303 - 7847340
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  7847303 aaaaattctcaaaagggtcttatatttagggacggagg 7847340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 11847835 - 11847872
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataata 46  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  11847835 tcaaaagggtcttataattagggacggagggagtaata 11847872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15498671 - 15498634
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  15498671 aaaaattctcaaaagggtcttataattagggacggagg 15498634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23282800 - 23282837
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23282800 aaaaattctcaaaagggtcttatatttagggacggagg 23282837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25045638 - 25045675
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  25045638 aaaaattctcaaaagggtcttataattagggacggagg 25045675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34915538 - 34915575
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  34915538 aaaaattctcaaaagggtcttataattagggacggagg 34915575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 925928 - 925972
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||||||||||||| ||||| ||||||||| ||||    
T  925928 aaaaattctcaaaagggtcttataattaggaacggagggagtaat 925972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 13901682 - 13901646
Alignment:
Q  2 aaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    |||| |||||||||||||||||| |||||||||||||    
T  13901682 aaaattctcaaaagggtcttataattagggacggagg 13901646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 17227528 - 17227564
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagggaata 43  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  17227528 tctcaaaagggtcttataattagggacggaggtaata 17227564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 23398141 - 23398173
Alignment:
Q  8 ctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||||||||||||||| |||||||||||||||    
T  23398141 ctcaaaagggtcttataattagggacggaggga 23398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2438267 - 2438222
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  2438267 aaaaattctcaaaagggtcttataattagggacggagggagtaata 2438222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7491886 - 7491847
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  7491886 aaaaattctcaaaagggtcttataattagggacggaggga 7491847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8716887 - 8716926
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  8716887 aaaaattctcaaaagggtcttataattagggacggaggga 8716926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 17408289 - 17408328
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  17408289 aaaaattctcaaaagggtcttataattagggacggaggga 17408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34062660 - 34062699
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34062660 aaaaattctcaaaagggtcttataattagggacggaggga 34062699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34883843 - 34883882
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34883843 aaaaattctcaaaagggtcttataattagggacggaggga 34883882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36131023 - 36131062
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  36131023 aaaaattctcaaaagggtcttataattagggacggaggga 36131062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 41450558 - 41450519
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  41450558 aaaaattctcaaaagggtcttataattagggacggaggga 41450519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 2438489 - 2438526
Alignment:
Q  10 caaaagggtcttatagttagggacggagggaataataa 47  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  2438489 caaaagggtcttataattagggacggagggagtaataa 2438526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8912869 - 8912906
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  8912869 aaaaattctcaaaagggtcttataattagggacggagg 8912906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 11201719 - 11201686
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  11201719 tctcaaaagggtcttataattagggacggaggga 11201686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13598564 - 13598527
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  13598564 aaaaaatttcaaaagggtcttatatttagggacggagg 13598527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 20252246 - 20252213
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  20252246 tctcaaaagggtcttataattagggacggaggga 20252213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 22897655 - 22897692
Alignment:
Q  10 caaaagggtcttatagttagggacggagggaataataa 47  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  22897655 caaaagggtcttataattagggacggagggagtaataa 22897692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26322288 - 26322325
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  26322288 aaaaattctcaaaagggtcttataattagggacggagg 26322325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 27560242 - 27560209
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  27560242 tctcaaaagggtcttataattagggacggaggga 27560209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 34113789 - 34113826
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataata 46  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  34113789 tcaaaagggtcttataattagggacggagggagtaata 34113826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 40607738 - 40607705
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  40607738 tctcaaaagggtcttataattagggacggaggga 40607705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 16456644 - 16456612
Alignment:
Q  11 aaaagggtcttatagttagggacggagggaata 43  Q
    |||||||||||||| ||||||||||||||||||    
T  16456644 aaaagggtcttataattagggacggagggaata 16456612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 23789005 - 23788965
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagggaataataa 47  Q
    |||||||||||||||||| ||| ||||||||||| ||||||    
T  23789005 tctcaaaagggtcttataattaaggacggagggagtaataa 23788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 943632 - 943677
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  943632 aaaaattctcaaaagggtcttataattagggacggagggagtaata 943677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15811227 - 15811272
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  15811227 aaaaattctcaaaagggtcttataattagggacggagggagtaata 15811272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39363189 - 39363234
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  39363189 aaaaattctcaaaagggtcttataattagggacggagggagtaata 39363234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44649671 - 44649626
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  44649671 aaaaattctcaaaagggtcttataattagggacggagggagtaata 44649626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49907063 - 49907018
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  49907063 aaaaattctcaaaagggtcttataattagggacggagggagtaata 49907018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37951944 - 37951992
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaaa 49  Q
    ||||| |||||||||||||||||| ||||||||||||||| || |||||    
T  37951944 aaaaattctcaaaagggtcttataattagggacggagggagtattaaaa 37951992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1039376 - 1039415
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  1039376 aaaaattctcaaaagggtcttataattagggacggaggga 1039415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1046282 - 1046321
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  1046282 aaaaattctcaaaagggtcttataattagggacggaggga 1046321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4102709 - 4102748
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  4102709 aaaaattctcaaaagggtcttataattagggacggaggga 4102748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11741439 - 11741400
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  11741439 aaaaattctcaaaagggtcttataattagggacggaggga 11741400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23542021 - 23541982
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  23542021 aaaaattctcaaaagggtcttataattagggacggaggga 23541982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30289857 - 30289896
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  30289857 aaaaattctcaaaagggtcttataattagggacggaggga 30289896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 46
Target Start/End: Complemental strand, 30290301 - 30290262
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggagggaataata 46  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  30290301 tctcaaaagggtcttataattagggacggagggagtaata 30290262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36694896 - 36694857
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  36694896 aaaaattctcaaaagggtcttataattagggacggaggga 36694857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 36710997 - 36710958
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  36710997 aaaaattctcaaaagggtcttataattagggacggaggga 36710958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39497475 - 39497436
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  39497475 aaaaattctcaaaagggtcttataattagggacggaggga 39497436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45039454 - 45039415
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  45039454 aaaaattctcaaaagggtcttataattagggacggaggga 45039415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 52431169 - 52431208
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  52431169 aaaaattctcaaaagggtcttataattagggacggaggga 52431208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7763744 - 7763781
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  7763744 aaaaattctcaaaagggtcttataattagggacggagg 7763781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 13343809 - 13343776
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  13343809 tctcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25509251 - 25509214
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  25509251 aaaaattctcaaaagggtcttataattagggacggagg 25509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27037311 - 27037274
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  27037311 aaaaattctcaaaagggtcttataattagggacggagg 27037274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 39497697 - 39497734
Alignment:
Q  10 caaaagggtcttatagttagggacggagggaataataa 47  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  39497697 caaaagggtcttataattagggacggagggagtaataa 39497734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 42872337 - 42872378
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataataaaat 50  Q
    |||||||||||||| | ||||||||||||||| |||||||||    
T  42872337 tcaaaagggtcttacaattagggacggagggagtaataaaat 42872378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43456616 - 43456653
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  43456616 aaaaattctcaaaagggtcttataattagggacggagg 43456653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44646313 - 44646268
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataata 46  Q
    ||||||| |||||||||||||||| ||||||||||| ||| |||||    
T  44646313 aaaaaatttcaaaagggtcttataattagggacggaaggagtaata 44646268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 46075868 - 46075901
Alignment:
Q  7 tctcaaaagggtcttatagttagggacggaggga 40  Q
    |||||||||||||||||| |||||||||||||||    
T  46075868 tctcaaaagggtcttataattagggacggaggga 46075901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14171584 - 14171540
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataat 45  Q
    ||||| |||||||||||||||||| |||| |||||||||| ||||    
T  14171584 aaaaattctcaaaagggtcttataattagagacggagggagtaat 14171540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5193 - 5146
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaa 48  Q
    ||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  5193 aaaaattctcaaaagggtcttataattagggacggaggtagtaataaa 5146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3777 - 3816
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  3777 aaaaattctcaaaagggtcttataattagggacggaggga 3816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10177 - 10224
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaa 48  Q
    ||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  10177 aaaaattctcaaaagggtcttataattagggacggaggtagtaataaa 10224  T

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Target: scaffold0240 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 18539 - 18492
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaa 48  Q
    ||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  18539 aaaaattctcaaaagggtcttataattagggacggaggtagtaataaa 18492  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3480 - 3433
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagggaataataaa 48  Q
    ||||| |||||||||||||||||| ||||||||||||| | |||||||    
T  3480 aaaaattctcaaaagggtcttataattagggacggaggtagtaataaa 3433  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12107 - 12068
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  12107 aaaaattctcaaaagggtcttataattagggacggaggga 12068  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 51677 - 51716
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  51677 aaaaattctcaaaagggtcttataattagggacggaggga 51716  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 47682 - 47643
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  47682 aaaaattctcaaaagggtcttataattagggacggaggga 47643  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 259117 - 259156
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggaggga 40  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  259117 aaaaattctcaaaagggtcttataattagggacggaggga 259156  T

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Target: scaffold0368 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 8252 - 8211
Alignment:
Q  9 tcaaaagggtcttatagttagggacggagggaataataaaat 50  Q
    |||||||||||||| | ||||||||||||||| |||||||||    
T  8252 tcaaaagggtcttacaattagggacggagggagtaataaaat 8211  T

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Target: scaffold0339 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7135 - 7172
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  7135 aaaaattctcaaaagggtcttataattagggacggagg 7172  T

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Target: scaffold0163 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 1441 - 1478
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  1441 aaaaaatttcaaaagggtcttataattagggacggagg 1478  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48696 - 48659
Alignment:
Q  1 aaaaaatctcaaaagggtcttatagttagggacggagg 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  48696 aaaaattctcaaaagggtcttataattagggacggagg 48659  T

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