View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6266_high_11 (Length: 206)
Name: NF6266_high_11
Description: NF6266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6266_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 27469984 - 27469811
Alignment:
| Q |
19 |
atttaggatgatatgaagagttttgtgaatgaagggttgagagtgttgcttcatggaaagagtatagtggtggaagattatttggatacaaggtgggaag |
118 |
Q |
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| T |
27469984 |
atttaggatgatatgaagagttttgtgaatgaagggttgagagtgttgcttcatggaaagagtatagtggtggaagattatttggatacaaggtgggaag |
27469885 |
T |
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| Q |
119 |
aggttactggagaggttgttgatgaagtcatcttcttaagtaaacacactgctgcttctaataaacctgctctc |
192 |
Q |
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| T |
27469884 |
aggttactggagaggttgttgatgaagtcatcttcttaagtaaacacactgctgcttctaataaacctgctctc |
27469811 |
T |
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