View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6266_high_7 (Length: 275)

Name: NF6266_high_7
Description: NF6266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6266_high_7
NF6266_high_7
[»] chr8 (29 HSPs)
chr8 (75-178)||(3853625-3853728)
chr8 (75-178)||(3858083-3858186)
chr8 (70-177)||(13404869-13404976)
chr8 (70-178)||(17110911-17111019)
chr8 (50-149)||(42739969-42740068)
chr8 (52-156)||(38573420-38573523)
chr8 (89-156)||(4156228-4156295)
chr8 (44-156)||(14799977-14800088)
chr8 (104-178)||(33902676-33902748)
chr8 (43-91)||(36625245-36625293)
chr8 (103-178)||(36103110-36103185)
chr8 (112-178)||(42711364-42711430)
chr8 (103-156)||(23011765-23011818)
chr8 (112-156)||(17110900-17110944)
chr8 (114-178)||(40046813-40046877)
chr8 (103-178)||(515531-515606)
chr8 (123-178)||(8689141-8689196)
chr8 (103-154)||(13144616-13144667)
chr8 (103-154)||(15186816-15186867)
chr8 (103-154)||(35404741-35404792)
chr8 (103-178)||(35979003-35979078)
chr8 (102-156)||(11744717-11744771)
chr8 (43-81)||(11744767-11744805)
chr8 (103-169)||(24044978-24045044)
chr8 (103-149)||(26520438-26520484)
chr8 (103-149)||(30444932-30444978)
chr8 (104-178)||(33986013-33986087)
chr8 (103-149)||(34008819-34008865)
chr8 (113-149)||(7202885-7202921)
[»] chr7 (36 HSPs)
chr7 (70-178)||(29065828-29065936)
chr7 (70-171)||(5644693-5644794)
chr7 (75-156)||(46069422-46069503)
chr7 (78-157)||(49052835-49052914)
chr7 (70-156)||(21635927-21636013)
chr7 (70-178)||(40110746-40110855)
chr7 (76-149)||(40854007-40854080)
chr7 (77-156)||(44915244-44915323)
chr7 (195-275)||(24711945-24712025)
chr7 (103-178)||(23548586-23548661)
chr7 (70-156)||(2057437-2057523)
chr7 (100-178)||(31632731-31632809)
chr7 (66-136)||(34388316-34388386)
chr7 (90-155)||(46481978-46482043)
chr7 (112-156)||(40110822-40110866)
chr7 (103-178)||(6498740-6498815)
chr7 (103-178)||(26162112-26162187)
chr7 (108-178)||(43955526-43955596)
chr7 (103-156)||(29639190-29639243)
chr7 (103-156)||(43791121-43791174)
chr7 (110-178)||(43955596-43955664)
chr7 (116-155)||(2057427-2057466)
chr7 (112-167)||(46482030-46482084)
chr7 (103-177)||(30524265-30524339)
chr7 (103-149)||(32650611-32650657)
chr7 (118-199)||(34398938-34399020)
chr7 (103-169)||(35776930-35776996)
chr7 (47-105)||(45984359-45984417)
chr7 (47-105)||(45988719-45988777)
chr7 (103-136)||(3905634-3905667)
chr7 (104-149)||(19865530-19865575)
chr7 (116-169)||(34388353-34388406)
chr7 (112-157)||(49052815-49052860)
chr7 (43-91)||(31913233-31913281)
chr7 (44-80)||(44915193-44915229)
chr7 (112-156)||(44915226-44915270)
[»] chr1 (47 HSPs)
chr1 (70-178)||(34756436-34756544)
chr1 (44-156)||(5474415-5474527)
chr1 (70-155)||(50005111-50005196)
chr1 (70-178)||(15034668-15034776)
chr1 (44-200)||(45565381-45565537)
chr1 (70-149)||(32572960-32573039)
chr1 (70-149)||(40264068-40264147)
chr1 (70-156)||(38277446-38277532)
chr1 (44-149)||(17502196-17502301)
chr1 (66-178)||(27804303-27804415)
chr1 (78-149)||(37214869-37214939)
chr1 (70-149)||(27935523-27935602)
chr1 (70-156)||(4038117-4038203)
chr1 (66-156)||(28745828-28745917)
chr1 (70-149)||(23536109-23536188)
chr1 (70-156)||(44410342-44410428)
chr1 (92-149)||(15245480-15245537)
chr1 (103-178)||(26501068-26501143)
chr1 (44-143)||(34007384-34007478)
chr1 (112-178)||(15034743-15034809)
chr1 (112-178)||(23536076-23536142)
chr1 (46-143)||(34007358-34007450)
chr1 (112-156)||(27935569-27935613)
chr1 (103-178)||(24273209-24273284)
chr1 (112-178)||(30190220-30190286)
chr1 (116-169)||(4038093-4038146)
chr1 (77-114)||(25889206-25889243)
chr1 (108-169)||(29446768-29446828)
chr1 (44-81)||(38277413-38277450)
chr1 (103-171)||(32647317-32647385)
chr1 (48-116)||(47074156-47074223)
chr1 (100-155)||(6470672-6470727)
chr1 (115-178)||(32287934-32287997)
chr1 (103-169)||(946931-946997)
chr1 (103-169)||(8224786-8224852)
chr1 (46-136)||(17502231-17502321)
chr1 (112-178)||(27804274-27804340)
chr1 (51-81)||(28745920-28745950)
chr1 (100-178)||(43622964-43623042)
chr1 (103-156)||(28632575-28632627)
chr1 (103-156)||(31195487-31195540)
chr1 (103-156)||(37447891-37447944)
chr1 (103-156)||(44570709-44570762)
chr1 (112-156)||(28745880-28745924)
chr1 (70-130)||(30190193-30190253)
chr1 (103-155)||(37448390-37448442)
chr1 (113-149)||(45565479-45565515)
[»] chr3 (34 HSPs)
chr3 (70-169)||(31070424-31070523)
chr3 (70-178)||(44436267-44436375)
chr3 (77-149)||(46429434-46429506)
chr3 (70-143)||(47284270-47284343)
chr3 (46-149)||(331993-332096)
chr3 (70-178)||(44692831-44692939)
chr3 (46-149)||(25655315-25655418)
chr3 (70-149)||(28092256-28092335)
chr3 (70-156)||(9129375-9129461)
chr3 (70-156)||(9137482-9137568)
chr3 (50-156)||(27251916-27252022)
chr3 (79-136)||(39215889-39215946)
chr3 (112-178)||(44692906-44692972)
chr3 (103-178)||(19475825-19475900)
chr3 (70-149)||(27251932-27252011)
chr3 (111-178)||(46672799-46672866)
chr3 (70-156)||(42130734-42130820)
chr3 (112-169)||(9129428-9129485)
chr3 (112-169)||(9137535-9137592)
chr3 (103-156)||(21307520-21307573)
chr3 (107-178)||(49457352-49457423)
chr3 (70-156)||(5415825-5415911)
chr3 (112-154)||(44436342-44436384)
chr3 (37-149)||(332012-332125)
chr3 (103-160)||(7976575-7976632)
chr3 (44-149)||(25655335-25655440)
chr3 (46-94)||(47284209-47284257)
chr3 (112-151)||(37321586-37321625)
chr3 (76-119)||(39110442-39110485)
chr3 (44-95)||(39215855-39215905)
chr3 (116-178)||(5415792-5415854)
chr3 (103-169)||(30766571-30766637)
chr3 (100-149)||(38506861-38506910)
chr3 (103-156)||(53129831-53129884)
[»] chr6 (13 HSPs)
chr6 (44-178)||(9285656-9285790)
chr6 (70-156)||(9763043-9763129)
chr6 (70-156)||(776122-776208)
chr6 (70-178)||(6919750-6919857)
chr6 (103-178)||(28918174-28918249)
chr6 (112-178)||(6919717-6919783)
chr6 (103-178)||(29889423-29889498)
chr6 (103-178)||(34244969-34245044)
chr6 (113-169)||(15299510-15299566)
chr6 (103-162)||(34364768-34364827)
chr6 (123-156)||(776111-776144)
chr6 (115-155)||(15299431-15299471)
chr6 (103-159)||(15832494-15832550)
[»] chr2 (29 HSPs)
chr2 (65-155)||(27033522-27033612)
chr2 (70-178)||(41461557-41461665)
chr2 (77-156)||(784842-784921)
chr2 (44-156)||(10244208-10244320)
chr2 (70-178)||(14365742-14365849)
chr2 (52-149)||(11824704-11824801)
chr2 (46-178)||(14537208-14537340)
chr2 (70-149)||(14537241-14537320)
chr2 (43-121)||(11684656-11684734)
chr2 (46-149)||(3345783-3345887)
chr2 (112-178)||(11716417-11716483)
chr2 (112-178)||(14365709-14365775)
chr2 (104-154)||(14954343-14954393)
chr2 (100-150)||(40026101-40026151)
chr2 (103-156)||(11532242-11532295)
chr2 (103-178)||(3092291-3092366)
chr2 (103-162)||(32839637-32839696)
chr2 (103-156)||(11793926-11793979)
chr2 (103-178)||(10480128-10480203)
chr2 (104-151)||(11607257-11607304)
chr2 (70-121)||(11716450-11716501)
chr2 (110-169)||(17180315-17180374)
chr2 (103-149)||(8736430-8736476)
chr2 (103-156)||(7167656-7167709)
chr2 (46-95)||(8736447-8736496)
chr2 (112-149)||(11684674-11684711)
chr2 (103-156)||(13017810-13017863)
chr2 (46-94)||(6749175-6749223)
chr2 (104-156)||(28740627-28740679)
[»] chr4 (38 HSPs)
chr4 (70-169)||(15660225-15660324)
chr4 (77-155)||(10128023-10128101)
chr4 (70-162)||(857264-857356)
chr4 (70-178)||(28845880-28845988)
chr4 (44-178)||(14982289-14982422)
chr4 (70-149)||(26250951-26251030)
chr4 (70-169)||(42844561-42844660)
chr4 (70-178)||(7352821-7352929)
chr4 (48-116)||(46724195-46724263)
chr4 (90-178)||(36455916-36456004)
chr4 (77-156)||(1107101-1107180)
chr4 (77-143)||(41498534-41498600)
chr4 (109-178)||(36456007-36456076)
chr4 (46-154)||(26250942-26251050)
chr4 (103-178)||(1539650-1539725)
chr4 (103-162)||(29091162-29091221)
chr4 (103-154)||(41139506-41139557)
chr4 (104-162)||(16300209-16300267)
chr4 (47-119)||(4441396-4441468)
chr4 (112-156)||(4896716-4896760)
chr4 (78-149)||(11041017-11041088)
chr4 (103-178)||(31473858-31473933)
chr4 (43-94)||(54566187-54566238)
chr4 (112-178)||(49111396-49111462)
chr4 (112-149)||(4441412-4441449)
chr4 (103-156)||(26534524-26534577)
chr4 (112-156)||(857323-857367)
chr4 (110-154)||(1112704-1112748)
chr4 (70-126)||(49111373-49111429)
chr4 (103-178)||(10633041-10633116)
chr4 (41-92)||(12914093-12914144)
chr4 (114-156)||(11040998-11041040)
chr4 (103-149)||(40548207-40548253)
chr4 (103-149)||(42775643-42775689)
chr4 (113-154)||(1112638-1112679)
chr4 (112-156)||(1107083-1107127)
chr4 (112-156)||(7352896-7352940)
chr4 (112-156)||(28845955-28845999)
[»] chr5 (38 HSPs)
chr5 (66-155)||(20523171-20523260)
chr5 (70-178)||(15374002-15374110)
chr5 (48-178)||(40643838-40643967)
chr5 (70-169)||(32389990-32390089)
chr5 (100-178)||(3563286-3563364)
chr5 (70-156)||(9764369-9764455)
chr5 (70-155)||(40809383-40809468)
chr5 (70-134)||(6634057-6634120)
chr5 (70-178)||(32470891-32470999)
chr5 (78-178)||(2316387-2316488)
chr5 (103-178)||(25935276-25935351)
chr5 (70-117)||(28828417-28828464)
chr5 (103-156)||(37722880-37722933)
chr5 (114-178)||(2721557-2721621)
chr5 (112-156)||(15373991-15374035)
chr5 (112-156)||(32390056-32390100)
chr5 (109-156)||(16515099-16515146)
chr5 (103-178)||(19533893-19533968)
chr5 (103-178)||(22766961-22767036)
chr5 (103-149)||(22305132-22305178)
chr5 (110-156)||(26281262-26281308)
chr5 (100-149)||(15270837-15270886)
chr5 (100-149)||(17542344-17542393)
chr5 (112-156)||(2316463-2316507)
chr5 (116-156)||(9764426-9764466)
chr5 (112-156)||(32470966-32471010)
chr5 (104-159)||(12479935-12479990)
chr5 (111-178)||(33245366-33245433)
chr5 (103-154)||(40090400-40090451)
chr5 (112-178)||(15804331-15804397)
chr5 (110-156)||(16515035-16515081)
chr5 (70-156)||(23091993-23092079)
chr5 (103-149)||(33146211-33146257)
chr5 (44-81)||(16515142-16515179)
chr5 (103-148)||(28490031-28490076)
chr5 (113-149)||(2550348-2550384)
chr5 (112-156)||(20523164-20523208)
chr5 (37-81)||(32390096-32390140)
[»] scaffold0044 (2 HSPs)
scaffold0044 (41-156)||(56282-56402)
scaffold0044 (116-156)||(56305-56345)
[»] scaffold0169 (1 HSPs)
scaffold0169 (103-178)||(4084-4159)
[»] scaffold0009 (1 HSPs)
scaffold0009 (108-171)||(42013-42076)
[»] scaffold0048 (1 HSPs)
scaffold0048 (105-156)||(82974-83025)
[»] scaffold1562 (2 HSPs)
scaffold1562 (70-150)||(442-522)
scaffold1562 (116-178)||(493-555)
[»] scaffold1158 (2 HSPs)
scaffold1158 (70-150)||(2071-2151)
scaffold1158 (116-178)||(2038-2100)
[»] scaffold0027 (1 HSPs)
scaffold0027 (103-156)||(10917-10970)
[»] scaffold0400 (1 HSPs)
scaffold0400 (103-169)||(4487-4553)
[»] scaffold0365 (1 HSPs)
scaffold0365 (103-169)||(5131-5197)
[»] scaffold0318 (1 HSPs)
scaffold0318 (103-155)||(2899-2950)
[»] scaffold0129 (1 HSPs)
scaffold0129 (104-156)||(19229-19280)


Alignment Details
Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 3853728 - 3853625
Alignment:
Q  75 agggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctat 174  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||| | ||    
T  3853728 agggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccat 3853629  T
Q  175 ccaa 178  Q
    ||||    
T  3853628 ccaa 3853625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 3858186 - 3858083
Alignment:
Q  75 agggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctat 174  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  ||||||| | ||    
T  3858186 agggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccat 3858087  T
Q  175 ccaa 178  Q
    ||||    
T  3858086 ccaa 3858083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 13404869 - 13404976
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  13404869 ttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 13404968  T
Q  170 tctatcca 177  Q
     |||||||    
T  13404969 cctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 17110911 - 17111019
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||  ||||| |    
T  17110911 ttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacatttc 17111010  T
Q  170 tctatccaa 178  Q
    || ||||||    
T  17111011 tccatccaa 17111019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 149
Target Start/End: Complemental strand, 42740068 - 42739969
Alignment:
Q  50 tgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||| |  |||||||| ||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| |||||| |||||    
T  42740068 tgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 38573420 - 38573523
Alignment:
Q  52 tgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattac 151  Q
    |||||||||| || ||| |||| ||| ||||||| || ||| ||||| ||||||||||||||||||| |||||||||||||||||||||||| ||| |||    
T  38573420 tgtttggatggga-aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaacactac 38573518  T
Q  152 attcc 156  Q
    |||||    
T  38573519 attcc 38573523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 4156228 - 4156295
Alignment:
Q  89 ttttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||| |||||| ||||||||||||    
T  4156228 ttttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattcc 4156295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 14799977 - 14800088
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||||| | |||| |||| |||||||| || ||||| ||| ||  ||||||||||| |||||||||  ||||||||||||| ||||||    
T  14799977 taagagtgtgtttggatgggggaatgttttgagggaattaaactattt-gaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaa 14800075  T
Q  144 gacattacattcc 156  Q
     ||||||| ||||    
T  14800076 aacattactttcc 14800088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 33902748 - 33902676
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||||||  |||||||||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  33902748 aaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaa 33902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 36625293 - 36625245
Alignment:
Q  43 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattt 91  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  36625293 ttaagagtgtgtttggatgaaggaatattttgagggaattcaattattt 36625245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 36103185 - 36103110
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||  ||||||| |||||||| ||||||||||| || |||||||||||| |||  ||||||||| ||||||    
T  36103185 caaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaa 36103110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 42711364 - 42711430
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||| ||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  42711364 gaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaa 42711430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 23011818 - 23011765
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| ||||||| |||||  ||||||||||||    
T  23011818 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 23011765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 17110944 - 17110900
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||    
T  17110944 gaattcaactcaaagtagttgaattccctcaaaacattacattcc 17110900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 40046877 - 40046813
Alignment:
Q  114 attcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||| ||||||||||||||||| |||||| |||||||||||| |||  |||||| || ||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaa 40046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 515531 - 515606
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||  ||||||| |||||||| ||||| | ||| || ||||||||||||||||  ||||||||| ||||||    
T  515531 caaacaatgaaattcacatcaaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaa 515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 8689196 - 8689141
Alignment:
Q  123 aaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||| |||||| ||||||||||||||||  ||||| ||| ||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaa 8689141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 13144667 - 13144616
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    |||||||| ||||||||||||||||| ||||||| |||||  ||||||||||    
T  13144667 caaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 15186816 - 15186867
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    ||||||||||||||||||| ||| || |||||||| ||||| ||||||||||    
T  15186816 caaacaatagaattcaccttaaactatttgaatttactcaaaacattacatt 15186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 35404741 - 35404792
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    |||||| || |||||||||||||||| |||||||||||||| | ||||||||    
T  35404741 caaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacatt 35404792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 35979003 - 35979078
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||||||||||| ||||||| ||||   | |||||||||| |||  ||||||||| ||||||    
T  35979003 caaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaa 35979078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 11744717 - 11744771
Alignment:
Q  102 tcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||||||||||| ||| |||||||||| | |||  ||||||||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacattacattcc 11744771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 11744805 - 11744767
Alignment:
Q  43 ttaagagtgtgtttggatgagagaatattttaagggaat 81  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  11744805 ttaagagtgtgtttggatgagagaatatttagagggaat 11744767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 24045044 - 24044978
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||| ||||||||||||| ||| ||||||| | |||| |||||||||||| |||  |||||||    
T  24045044 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 24044978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 26520438 - 26520484
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  26520438 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 30444932 - 30444978
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  30444932 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 33986087 - 33986013
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||  |||||||||||||||| |||||||  ||||| |||||||||| |||||  ||||||| | ||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaa 33986013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 34008865 - 34008819
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  34008865 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 7202921 - 7202885
Alignment:
Q  113 aattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||||||||||||||| |||||| |||||    
T  7202921 aattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 29065936 - 29065828
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||     
T  29065936 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattca 29065837  T
Q  170 tctatccaa 178  Q
    || ||||||    
T  29065836 tccatccaa 29065828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 5644794 - 5644693
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  5644794 ttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 5644695  T
Q  170 tc 171  Q
    ||    
T  5644694 tc 5644693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 46069503 - 46069422
Alignment:
Q  75 agggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  46069503 agggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 46069422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 49052835 - 49052914
Alignment:
Q  78 gaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcct 157  Q
    |||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  49052835 gaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcct 49052914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 21635927 - 21636013
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||| |||| | |||| ||||||||||||    
T  21635927 ttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattcc 21636013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 40110855 - 40110746
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaa-caatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattc 168  Q
    |||| ||||||||||| || |||||| || ||||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||| |||  ||||||    
T  40110855 ttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattc 40110756  T
Q  169 ctctatccaa 178  Q
    | | ||||||    
T  40110755 ccccatccaa 40110746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 40854080 - 40854007
Alignment:
Q  76 gggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  40854080 gggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 44915244 - 44915323
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||| || |||||| || |||||||||||||||||||||| | |||||||||||| |||||| |||||| |||||    
T  44915244 ggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattaaattcc 44915323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 24711945 - 24712025
Alignment:
Q  195 tgtttgattgtgaagataactagagaaacgaaaataaagagagaaagcgtgtaatgagagagacccaaaacataacaattt 275  Q
    |||||| |||||||||||| |||||||| || ||||||| ||||||| |||| | |||||||||||||||| |||| ||||    
T  24711945 tgtttggttgtgaagataaatagagaaaagataataaagtgagaaagagtgtgaggagagagacccaaaacttaacgattt 24712025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 23548586 - 23548661
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||| ||||||| |||||||||||||| ||| |||||||| |||  ||||||||| ||||||    
T  23548586 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaa 23548661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 2057437 - 2057523
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||| || |||||| ||  ||||||||||| |||||||||  ||||||||||||| |||||| ||||||| ||||    
T  2057437 ttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttcc 2057523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 31632809 - 31632731
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||| | ||||||    
T  31632809 attcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaa 31632731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 34388386 - 34388316
Alignment:
Q  66 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatt 136  Q
    |||||||| ||||||||||| || |||||| ||  |||||||||| |||||||||| ||||||||||||||    
T  34388386 aatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtagttgaatt 34388316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 46482043 - 46481978
Alignment:
Q  90 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    ||||||||| ||||||||||||||||||| ||  || ||||| ||||||||||| |||||||||||    
T  46482043 tttgagttgaattcaaacaatagaattcatcttcaaatagttaaatttcctcaaaacattacattc 46481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 40110822 - 40110866
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  40110822 gaattcacctcaaagtagttgaattccctcaaaacattacattcc 40110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 6498740 - 6498815
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| | |||||| |||||||| ||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  6498740 caaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaa 6498815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 26162112 - 26162187
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||| | ||||||    
T  26162112 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaa 26162187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 43955596 - 43955526
Alignment:
Q  108 aatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||| || |||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  43955596 aatagaattcatcttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 43955526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 29639190 - 29639243
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| |||||||||||||| || |||||||||||||  ||||||||||||    
T  29639190 caaacaatggaattcacctcaaaatatttgaatttcctcataacattacattcc 29639243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 43791174 - 43791121
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| || |||||||||||||| ||||||| |||||| ||||||||||||    
T  43791174 caaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattcc 43791121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 43955596 - 43955664
Alignment:
Q  110 tagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||| ||||| |||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  43955596 tagaatgcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 43955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 2057466 - 2057427
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattc 2057427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 46482030 - 46482084
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacatt 167  Q
    ||||||| |||||| ||||||||||| ||||| |||||||||||||||| ||||||    
T  46482030 gaattcaactcaaa-tagttgaattttctcaaaacattacattccttcaacacatt 46482084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 30524339 - 30524265
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatcca 177  Q
    ||||||||  |||||| | ||||||| ||||||| |||||| ||||||||||||||||  ||||| ||| |||||    
T  30524339 caaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattccttcaaaacattactccatcca 30524265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||| |||||||||||||||| ||||||| |||||| |||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 34398938 - 34399020
Alignment:
Q  118 acctcaaagtagttgaattt-cctcaagacattacattccttcatcacattcctctatccaacctcgttctaaggctttgttt 199  Q
    |||||||||||||||||||  |||||| |||||||||||| |||  ||||||| | |||||| | |  |||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaaggctttgttt 34399020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 35776930 - 35776996
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||| ||||||||||||||||| ||||||| |||||  |||||||||||| |||  |||||||    
T  35776930 caaataatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcc 35776996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 45984359 - 45984417
Alignment:
Q  47 gagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaa 105  Q
    |||||||||||||||| | ||| |||||||||||||||| || |||||| || ||||||    
T  45984359 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaa 45984417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 45988719 - 45988777
Alignment:
Q  47 gagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaa 105  Q
    |||||||||||||||| | ||| |||||||||||||||| || |||||| || ||||||    
T  45988719 gagtgtgtttggatgaaaaaatgttttaagggaattcaaatactttgaggtgaattcaa 45988777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 3905634 - 3905667
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatt 136  Q
    |||||||||||||||||||||||||| |||||||    
T  3905634 caaacaatagaattcacctcaaagtatttgaatt 3905667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 19865530 - 19865575
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||  |||||||||||||||| |||||||||||||| |||||    
T  19865530 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaacatt 19865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 34388353 - 34388406
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    ||||||||||||||||||||| |||||| | |||||||||| |||  |||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctcaaaacattcc 34388406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 49052860 - 49052815
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcct 157  Q
    ||||||| |||||||||||||||||  ||||| |||||||||||||    
T  49052860 gaattcaactcaaagtagttgaattcactcaaaacattacattcct 49052815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 31913233 - 31913281
Alignment:
Q  43 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattt 91  Q
    ||||||||||||||||||| | |||| |||| ||||||||||| |||||    
T  31913233 ttaagagtgtgtttggatgggggaatgttttgagggaattcaactattt 31913281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 44915193 - 44915229
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaa 80  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  44915193 taagagtgtgtttggatgagagaattttttgagggaa 44915229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 44915270 - 44915226
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||||||| | |||| ||||||| ||||    
T  44915270 gaattcacctcaaagtagttgaattccttcaaaacattacgttcc 44915226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 34756544 - 34756436
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  34756544 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 34756445  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  34756444 cccatccaa 34756436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 5474415 - 5474527
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||||| | |||| |||| |||||||| ||||| |||||  || |||||||||||||||||||||| |||||||||||||| ||||||    
T  5474415 taagagtgtgtttggatgggggaatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaa 5474514  T
Q  144 gacattacattcc 156  Q
     ||||||||||||    
T  5474515 aacattacattcc 5474527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 50005196 - 50005111
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||| |||||||||||    
T  50005196 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattc 50005111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 15034776 - 15034668
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||  |||||||    
T  15034776 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 15034677  T
Q  170 tctatccaa 178  Q
    || ||||||    
T  15034676 tccatccaa 15034668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 200
Target Start/End: Complemental strand, 45565537 - 45565381
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    ||||||||||||||||||  ||||| |||| ||||||||||| || |||||| || ||| |||||||||||||||||| ||| |||||||||| ||||||    
T  45565537 taagagtgtgtttggatggaagaatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaa 45565438  T
Q  144 gacattacattccttcatcacattcctctatccaacctcgttctaaggctttgtttg 200  Q
     |||||||||||  |||  ||||||| | |||||| | |   |||||||||||||||    
T  45565437 aacattacattctctcaaaacattcccccatccaaacacaccctaaggctttgtttg 45565381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 32573039 - 32572960
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  32573039 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 40264147 - 40264068
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  40264147 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 38277532 - 38277446
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| | |||| ||||||||||||    
T  38277532 ttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtagttgaattccttcaaaacattacattcc 38277446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 17502196 - 17502301
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||||||| ||||||||| || |||||||| || |||||| || ||||||| ||||||||||| || |||||||||||||| ||||||    
T  17502196 taagagtgtgtttggatgagggaatattttgagagaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaa 17502295  T
Q  144 gacatt 149  Q
     |||||    
T  17502296 aacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 27804303 - 27804415
Alignment:
Q  66 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcaca 165  Q
    |||||||| ||||||||||| ||||||||| || ||||||||||||||||||| || |||||||||||||| | || | |||||||||| | |||  |||    
T  27804303 aatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccttctaaacattacatttcctcaaaaca 27804402  T
Q  166 ttcctctatccaa 178  Q
    |||||| ||||||    
T  27804403 ttcctccatccaa 27804415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 37214869 - 37214939
Alignment:
Q  78 gaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  37214869 gaattcaattattttgaggtggattcaaacaatagaattcacctc-aagtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 27935602 - 27935523
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||| ||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  27935602 ttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagtagttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 4038117 - 4038203
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  4038117 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttcc 4038203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 156
Target Start/End: Complemental strand, 28745917 - 28745828
Alignment:
Q  66 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||| ||||||||| || |||||||||||||||||||||| ||| || ||||||| ||||||  |||||||||||    
T  28745917 aatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattgaattccctcaaaccattacattcc 28745828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 23536109 - 23536188
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||||||||||| || |||||| || |||||||||||| ||||||||| |||||||||||||| |||||| |||||    
T  23536109 ttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 44410428 - 44410342
Alignment:
Q  70 ttttaagggaattcaattatttt-gagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||  || || ||||||||||||    
T  44410428 ttttgagggaattcaattatttttgagt-ggattcagacaatagaattcacctcaaaatagttgaattcgcttaaaacattacattcc 44410342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 15245537 - 15245480
Alignment:
Q  92 tgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  15245537 tgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 26501068 - 26501143
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| |||||||| |||||||| ||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  26501068 caaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaa 26501143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 34007478 - 34007384
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||||| |  |||||||| ||||||||||| || ||||||||| ||||||      ||||||| ||||||||||||||||| ||||||    
T  34007478 taagagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattcaa-----tgaattcaactcaaagtagttgaattccctcaa 34007384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 15034743 - 15034809
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  15034743 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 15034809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 23536142 - 23536076
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  23536142 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 23536076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 34007358 - 34007450
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||| |  |||||||| ||||||||||| || ||||||||| ||||     || ||||||| ||||||||||||||||| ||||||    
T  34007358 agagtgtgtttggatggggaaatattttgagggaattcaactactttgagttgaattc-----attgaattcaactcaaagtagttgaattccctcaa 34007450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 27935569 - 27935613
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||    
T  27935569 gaattcaactcaaagtagttgaatttcctcaaaacattacattcc 27935613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 24273209 - 24273284
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||| | ||||||    
T  24273209 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaa 24273284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 30190220 - 30190286
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||| |||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  30190220 gaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaa 30190286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 4038146 - 4038093
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 4038093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 25889206 - 25889243
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaa 114  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  25889206 ggaattcaattattttgaggtggattcaaacaatagaa 25889243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 29446828 - 29446768
Alignment:
Q  108 aatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||||||||| ||| |||||||||| |||||| ||||||||||||||||  |||||||    
T  29446828 aatagaattcaccttaaa-tagttgaattccctcaaaacattacattccttcaaaacattcc 29446768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 38277413 - 38277450
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaat 81  Q
    |||||||||||||||||||||||||||||| |||||||    
T  38277413 taagagtgtgtttggatgagagaatattttgagggaat 38277450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 32647385 - 32647317
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctc 171  Q
    |||||||| | ||||||| ||||||| |||||||||||||| ||| |||||| |||||  |||||||||    
T  32647385 caaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcctc 32647317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 47074156 - 47074223
Alignment:
Q  48 agtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaatt 116  Q
    |||||||||||||| | ||||||||| | ||||||||| || |||||| || |||||||||||||||||    
T  47074156 agtgtgtttggatggg-gaatattttgaaggaattcaactactttgaggtgaattcaaacaatagaatt 47074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 6470672 - 6470727
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    ||||||||||| |||| |||||||||| | ||||||| |||||| |||||||||||    
T  6470672 attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattc 6470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 32287934 - 32287997
Alignment:
Q  115 ttcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||| |||||||| |||||||||||||| |||||||||||| |||  || |||||| ||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaa 32287997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 946997 - 946931
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||| |||||||||||| |||| |||||||||||||| | | |||||||| |||  |||||||    
T  946997 caaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctcaaaacattcc 946931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 8224852 - 8224786
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||| |||||||| |||||||| || |||| |||||| |||||||||||| |||  |||||||    
T  8224852 caaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattcc 8224786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 17502321 - 17502231
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatt 136  Q
    ||||||||||| |||  | |||| |||| ||||||||||| || ||| ||||| |||| |  | | |||||||||||||||||||||||||    
T  17502321 agagtgtgttttgattggggaatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaatt 17502231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 27804340 - 27804274
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||| |||||||||| |||||| | |||||||||| |||  ||||||| | ||||||    
T  27804340 gaattcacctcaaaatagttgaattccctcaaaatattacattccctcaaaacattcccccatccaa 27804274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 81
Target Start/End: Complemental strand, 28745950 - 28745920
Alignment:
Q  51 gtgtttggatgagagaatattttaagggaat 81  Q
    |||||||||||||||||||||||||||||||    
T  28745950 gtgtttggatgagagaatattttaagggaat 28745920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 43622964 - 43623042
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||| |||  |||||||||||||||| || ||||| ||||| |||||||||||| |||  ||||||| | ||||||    
T  43622964 attcaaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaa 43623042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 28632575 - 28632627
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| |||||||  ||||| ||||||||||||    
T  28632575 caaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattcc 28632627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 31195540 - 31195487
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| |||||||||||||| || || ||||||||||  ||||||||||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattcc 31195487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 37447891 - 37447944
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  37447891 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattcc 37447944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 44570762 - 44570709
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||| ||| ||||||| | |||| ||||||||||||    
T  44570762 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattcc 44570709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 28745880 - 28745924
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||    
T  28745880 gaattcacctcaaaatagttgaattccctcaaaatattacattcc 28745924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 30190253 - 30190193
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagt 130  Q
    |||| ||| ||||||| ||||||||| || |||||||||||||||||| ||| | ||||||    
T  30190253 ttttgaggtaattcaactattttgaggtgaattcaaacaatagaattccccttagagtagt 30190193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 37448390 - 37448442
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    |||||||| |||||||| |||||||| || |||| |||||| |||||||||||    
T  37448390 caaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattc 37448442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 149
Target Start/End: Original strand, 45565479 - 45565515
Alignment:
Q  113 aattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||||||||||||||| |||||| |||||    
T  45565479 aattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 31070523 - 31070424
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  31070523 ttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 31070424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 44436375 - 44436267
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||  |||||||    
T  44436375 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctcaaaacattcc 44436276  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  44436275 cccatccaa 44436267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 46429506 - 46429434
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  46429506 ggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 47284343 - 47284270
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| ||||||    
T  47284343 ttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagtagctgaattccctcaa 47284270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 331993 - 332096
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaa-caatagaattcacctcaaagtagttgaatttcctcaag 144  Q
    |||||||||||||||| |||||| |||| ||||||||||| || |||||| || ||||||| ||||||||||||||| |||||||||||||| ||||||     
T  331993 agagtgtgtttggatg-gagaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaa 332091  T
Q  145 acatt 149  Q
    |||||    
T  332092 acatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 44692939 - 44692831
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| ||||| |||||||| |||||| ||||||| |||| |||  |||||||    
T  44692939 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctcaaaacattcc 44692840  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  44692839 cccatccaa 44692831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 25655315 - 25655418
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaga 145  Q
    |||||||||||||||| |  ||| |||| ||||||||||| || ||||||||| ||||||| ||||||||||| || |||||||||||||| | |||| |    
T  25655315 agagtgtgtttggatggggaaatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaa 25655414  T
Q  146 catt 149  Q
    ||||    
T  25655415 catt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 28092256 - 28092335
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| |||||||||||||| |||||| || ||||||||||||||||||||||||||  ||||||||| |||||| |||||    
T  28092256 ttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 9129461 - 9129375
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||| || |||||||||||||| | |||| ||||||||||||    
T  9129461 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattcc 9129375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 9137568 - 9137482
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||| || |||||||||||||| | |||| ||||||||||||    
T  9137568 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattcc 9137482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 27251916 - 27252022
Alignment:
Q  50 tgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||| | |||| |||||||||||||||| || ||| ||||| |||| |    | ||||||||||||||||||||||||| |||||| |||||    
T  27251916 tgtgtttggatgggggaatgttttaagggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacatt 27252015  T
Q  150 acattcc 156  Q
    |||||||    
T  27252016 acattcc 27252022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 39215946 - 39215889
Alignment:
Q  79 aattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatt 136  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  39215946 aattcaattattttgaggtggattcaaacaataaaattcacctcaaagtaattgaatt 39215889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 44692906 - 44692972
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  44692906 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaa 44692972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 19475900 - 19475825
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||||| ||||||    
T  19475900 caaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaa 19475825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 27252011 - 27251932
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||| || |||||||||||||| ||| || |||||    
T  27252011 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtagttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 46672799 - 46672866
Alignment:
Q  111 agaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  46672799 agaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 46672866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 42130734 - 42130820
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||||||| || |  |||||||||| | ||||||||||||||||||| ||||||| ||| || | ||||||||||    
T  42130734 ttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagtaattgaattccctaaaaagattacattcc 42130820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 9129428 - 9129485
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  9129428 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 9129485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 9137535 - 9137592
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  9137535 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 9137592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 21307520 - 21307573
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  21307520 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcc 21307573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 49457423 - 49457352
Alignment:
Q  107 caatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||| ||||| |||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 49457352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 5415825 - 5415911
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||| || ||| || ||  | ||||||||||||||||||| |||||||||||||| | |||| ||||||| ||||    
T  5415825 ttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttcc 5415911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 44436342 - 44436384
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    ||||||||||||||||||||||||| |||||| ||||||||||    
T  44436342 gaattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 149
Target Start/End: Complemental strand, 332125 - 332012
Alignment:
Q  37 aatactttaagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaata-gaattcacctcaaagtagttgaat 135  Q
    ||||| |||||||||||||||||||  ||||| |||| ||||||||||| || ||| || || |||| |    |  ||||||||||||||||||||||||    
T  332125 aataccttaagagtgtgtttggatggaagaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaat 332026  T
Q  136 ttcctcaagacatt 149  Q
    | |||||| |||||    
T  332025 tccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 7976632 - 7976575
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttca 160  Q
    |||||||||||||||||||||| ||| || |||| | |||| ||||||||||||||||    
T  7976632 caaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattccttca 7976575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 25655440 - 25655335
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||||| |  ||| |||| | ||||||||| || ||| ||||| |||| |  | | ||||||| ||||||||||||||||| ||||||    
T  25655440 taagagtgtgtttggatggggaaatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaa 25655341  T
Q  144 gacatt 149  Q
     |||||    
T  25655340 aacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 47284257 - 47284209
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttga 94  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||    
T  47284257 agagtgtgtttggatgagggaatattttgagggaattcaaatactttga 47284209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 151
Target Start/End: Complemental strand, 37321625 - 37321586
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattac 151  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattac 37321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 39110442 - 39110485
Alignment:
Q  76 gggaattcaattattttgagttggattcaaacaatagaattcac 119  Q
    |||||||||| || ||||||||| ||||||||||||||||||||    
T  39110442 gggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 39215855 - 39215905
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgag 95  Q
    |||||||||||||||||| | ||||||||| |||||||||||||| ||||||    
T  39215855 taagagtgtgtttggatggg-gaatatttttagggaattcaattactttgag 39215905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 5415854 - 5415792
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||| |||||||||||||| |||||| |||||||||||| |||  | ||||| ||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaa 5415792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 30766637 - 30766571
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||| ||||||||||||| ||| ||||||| | |||| |||||||||||| |||  |||||||    
T  30766637 caaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 38506861 - 38506910
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||||| |||||||||||||| || ||||||| |||||| |||||    
T  38506861 attcaaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 53129831 - 53129884
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||| ||||||| ||||||| ||| || ||||||||||||    
T  53129831 caaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattcc 53129884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 9285790 - 9285656
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    ||||||||||||| |||||| |||| |||| ||||||||||| || |||||| || ||||||||||||||||||| ||||||||||||||||| ||||||    
T  9285790 taagagtgtgtttagatgagggaatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaa 9285691  T
Q  144 gacattacattccttcatcacattcctctatccaa 178  Q
     |||||||||||| |||  ||||||| | ||||||    
T  9285690 aacattacattccctcaaaacattcccccatccaa 9285656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 9763129 - 9763043
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  9763129 ttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattcc 9763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 776122 - 776208
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||| ||||||| || ||| ||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  776122 ttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattcc 776208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 6919750 - 6919857
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| ||| | |||||||| |||||| ||||||| |||| |||  |||||||    
T  6919750 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaa-tggttgaattccctcaaaacattactttccctcaaaacattcc 6919848  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  6919849 cccatccaa 6919857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 28918249 - 28918174
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||  |||||||||||||||| ||||||||||| || |||||||||||| |||  ||||||||| ||||||    
T  28918249 caaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaa 28918174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 6919783 - 6919717
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||   |||||||| ||||||    
T  6919783 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaa 6919717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 29889423 - 29889498
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||| ||| |||||||| |||||||| ||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  29889423 caaataatggaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaa 29889498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 34244969 - 34245044
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||| || |||||||| ||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  34244969 caaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaa 34245044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 15299510 - 15299566
Alignment:
Q  113 aattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||||||||||||||||||| | |||| |||||||||||| |||  |||||||    
T  15299510 aattcacctcaaagtagttgaattccttcaaaacattacattccctcaaaacattcc 15299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 34364827 - 34364768
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatc 162  Q
    |||||||| ||||||||||||||||| || |||| |||||  |||||||||||| |||||    
T  34364827 caaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctcatc 34364768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 776144 - 776111
Alignment:
Q  123 aaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||| ||||||||||||    
T  776144 aaagtagttgaatttcctcaaaacattacattcc 776111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 15299471 - 15299431
Alignment:
Q  115 ttcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    ||||||||||||||||||||||  ||||| |||||||||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattc 15299431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 15832550 - 15832494
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttc 159  Q
    ||||||||  |||||||| ||||||| ||||||| ||| || |||||||||||||||    
T  15832550 caaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccttc 15832494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 155
Target Start/End: Complemental strand, 27033612 - 27033522
Alignment:
Q  65 gaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  27033612 gaatattttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattc 27033522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 41461557 - 41461665
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| |||  |||||||    
T  41461557 ttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcc 41461656  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  41461657 cccatccaa 41461665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 784842 - 784921
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||| || || ||||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  784842 ggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 784921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 10244320 - 10244208
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    ||||||||| |||| ||| | |||| |||||||||||||||| || |||||| ||  ||||||||||| |||||||||  ||||||||||||| ||||||    
T  10244320 taagagtgtatttgaatgggggaatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaa 10244221  T
Q  144 gacattacattcc 156  Q
     ||||||| ||||    
T  10244220 aacattactttcc 10244208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 14365742 - 14365849
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaa-caatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattc 168  Q
    |||| ||||||||||| || |||||| || ||||||| ||||||||||||||  |||||||||||||| |||||| |||||||||||| |||  ||||||    
T  14365742 ttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacattacattccctcaaaacattc 14365839  T
Q  169 ctctatccaa 178  Q
    ||| ||||||    
T  14365840 ctccatccaa 14365849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 11824704 - 11824801
Alignment:
Q  52 tgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||||   |||| |||| ||||||||||| || |||||| || |||||||||||| ||||||||| |||||||||||||| |||||| |||||    
T  11824704 tgtttggatggaggaatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 14537340 - 14537208
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaga 145  Q
    |||||||||||||||| | |||| |||| ||||||||||| || ||| || || |||| |    | ||||||||||||||||||||||||| |||||| |    
T  14537340 agagtgtgtttggatgggggaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaa 14537241  T
Q  146 cattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||| |||  ||||||| | ||||||    
T  14537240 cattacattccctcaaaacattcccccatccaa 14537208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 14537241 - 14537320
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||| ||||||| || |||||| || |||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  14537241 ttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 11684734 - 11684656
Alignment:
Q  43 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacct 121  Q
    |||||||||||||||||||   |||| |||| ||||||||||| || |||||| || ||||||||||||||||||||||    
T  11684734 ttaagagtgtgtttggatggaggaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct 11684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 3345887 - 3345783
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaat-tattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaag 144  Q
    |||| ||||||||||| |  ||| |||| |||||||||||  || |||||| || ||||||||||||||||| |||| |||||||||||||| ||||||     
T  3345887 agagcgtgtttggatggggaaatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaa 3345788  T
Q  145 acatt 149  Q
    |||||    
T  3345787 acatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 11716483 - 11716417
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||| || ||||||    
T  11716483 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaa 11716417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 14365775 - 14365709
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  14365775 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 14365709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 14954343 - 14954393
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    |||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 40026151 - 40026101
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatta 150  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  40026151 attcaaacaatagaattcacctcaaagtatttaaatttcctcaaaacatta 40026101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 11532242 - 11532295
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  11532242 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcc 11532295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 3092366 - 3092291
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||| ||| ||||||| |||||||||||||| ||| |||||||| |||  ||||||||| ||||||    
T  3092366 caaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaa 3092291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 32839637 - 32839696
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatc 162  Q
    |||||||| |||||||| |||||||| ||||||| |||||| |||||||||||| |||||    
T  32839637 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctcatc 32839696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 11793979 - 11793926
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| ||||||| |||||  ||||||||||||    
T  11793979 caaacaatggaattcacctcaaagtatttgaattccctcataacattacattcc 11793926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 10480203 - 10480128
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||||||||||| ||||||| ||||   |||||||||||| |||  ||||||| | ||||||    
T  10480203 caaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaa 10480128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattac 151  Q
    ||||||| ||||||||||||||||| ||||||| |||||| |||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 11716450 - 11716501
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacct 121  Q
    |||| ||||||||||| || |||||| || ||||||||||||||||||||||    
T  11716450 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct 11716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 17180374 - 17180315
Alignment:
Q  110 tagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    ||||||||| |||||| |||||||||| |||||| |||||||||||| |||  |||||||    
T  17180374 tagaattcatctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcc 17180315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 8736430 - 8736476
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  8736430 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 7167656 - 7167709
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||  |||||||||||||||| ||||||| | |||| ||||||||||||    
T  7167656 caaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattcc 7167709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 8736496 - 8736447
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgag 95  Q
    |||||||||||||||||| |||| |||| ||||||||||| || ||||||    
T  8736496 agagtgtgtttggatgagggaatgttttgagggaattcaaatactttgag 8736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 11684674 - 11684711
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  11684674 gaattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 13017863 - 13017810
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| ||||||| ||| || | ||||||||||    
T  13017863 caaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattcc 13017810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 6749175 - 6749223
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttga 94  Q
    ||||||||||||||||||  ||||||||  ||||||||||||| |||||    
T  6749175 agagtgtgtttggatgaggaaatattttgtgggaattcaattactttga 6749223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 28740679 - 28740627
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| ||||| || |||||||| ||||||| |||||| ||||||||||||    
T  28740679 aaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattcc 28740627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 15660225 - 15660324
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||  |||||||    
T  15660225 ttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 15660324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 10128023 - 10128101
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  10128023 ggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattc 10128101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 857356 - 857264
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatc 162  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||    
T  857356 ttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcatc 857264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 28845988 - 28845880
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||| |||| | |||||||||||| |||  |||||||    
T  28845988 ttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctcaaaacattcc 28845889  T
Q  170 tctatccaa 178  Q
    || ||||||    
T  28845888 tccatccaa 28845880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 44 - 178
Target Start/End: Complemental strand, 14982422 - 14982289
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    |||||||||||||||||| | |||| |||| ||||||||||| || |||||| || ||||||| |||| ||||||||| ||||||||| |||| ||||||    
T  14982422 taagagtgtgtttggatgggggaatcttttgagggaattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaa 14982324  T
Q  144 gacattacattccttcatcacattcctctatccaa 178  Q
     |||||||||||| |||  ||||||||| ||||||    
T  14982323 aacattacattccctcaaaacattcctccatccaa 14982289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 26250951 - 26251030
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  26250951 ttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 42844660 - 42844561
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| |||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| | |||| | |||||||||| |||  |||||||    
T  42844660 ttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctcaaaacattcc 42844561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 7352929 - 7352821
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || ||||| ||| |||||||||||||||||||||| ||| |||||||||| | |||| |||||||||||| |||  |||||||    
T  7352929 ttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctcaaaacattcc 7352830  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  7352829 cccatccaa 7352821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 46724263 - 46724195
Alignment:
Q  48 agtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaatt 116  Q
    |||||||||||||| |  |||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  46724263 agtgtgtttggatggggaaatattttgagggaattcaattattttgaggtggattcaaacaatagaatt 46724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 36456004 - 36455916
Alignment:
Q  90 tttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||| || |||||||||||||||||||||| |||||||||||||| |||||| |||||| ||||| |||  ||||||| | ||||||    
T  36456004 tttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaa 36455916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 1107101 - 1107180
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||| || |||||| || |||||||||||||||||||||| | |||||||||||| |||||| |||||| |||||    
T  1107101 ggaattcaactactttgagatgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattatattcc 1107180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 41498600 - 41498534
Alignment:
Q  77 ggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaa 143  Q
    ||||||||||||||||||| || ||| |||||||||||||||||| ||||| |||||||| ||||||    
T  41498600 ggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagtggttgaattccctcaa 41498534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 36456007 - 36456076
Alignment:
Q  109 atagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||| |||  ||||||||| ||||||    
T  36456007 atagaattcaccttaaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaa 36456076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 26251050 - 26250942
Alignment:
Q  46 agagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaaga 145  Q
    |||||||||||||||| | |||| |||| ||||||||||| || |||||| || |||| |  | | |||| ||||||||| || |||||||||||||| |    
T  26251050 agagtgtgtttggatgggggaatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaa 26250951  T
Q  146 cattacatt 154  Q
    |||||||||    
T  26250950 cattacatt 26250942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 1539725 - 1539650
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||  |||||||||||||||| ||||||| |||||| |||||||||||| |||  ||||||||| ||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaa 1539650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 29091221 - 29091162
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatc 162  Q
    ||||||||||||||||| |||||||| ||||||| |||||| |||||||||||| |||||    
T  29091221 caaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctcatc 29091162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 41139557 - 41139506
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  41139557 caaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacatt 41139506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 16300209 - 16300267
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatc 162  Q
    ||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| ||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattcattcatc 16300267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 4441468 - 4441396
Alignment:
Q  47 gagtgtgtttggatgagagaatattttaagggaattcaattattttgagttggattcaaacaatagaattcac 119  Q
    ||||||||||||||| | |||| |||| ||| ||||||| || |||||| || ||||||||||||||||||||    
T  4441468 gagtgtgtttggatgggggaatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcac 4441396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 4896716 - 4896760
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  4896716 gaattcacctcaaagtagttgaattccctcaaaacattacattcc 4896760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 11041017 - 11041088
Alignment:
Q  78 gaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| || |||||| || || ||||||||||||||||||  |||||||||||||| |||||| |||||    
T  11041017 gaattcaactactttgaggtgaatccaaacaatagaattcaccataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 31473933 - 31473858
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||| |||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||| | ||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaa 31473858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 54566187 - 54566238
Alignment:
Q  43 ttaagagtgtgtttggatgagagaatattttaagggaattcaattattttga 94  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||| |||||    
T  54566187 ttaagagtgtgtttggatgaaagaatgttttgagggaattcaattactttga 54566238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 49111396 - 49111462
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||| |||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  49111396 gaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 49111462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 4441412 - 4441449
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||||||||||||||||||||||| |||||    
T  4441412 gaattcacctcaaagtagttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 26534577 - 26534524
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||||||||  ||||||| ||||||| |||||| ||||||||||||    
T  26534577 caaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattcc 26534524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 857323 - 857367
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||    
T  857323 gaattcaactcaaagtagttgaattccctcaaaacattacattcc 857367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 1112704 - 1112748
Alignment:
Q  110 tagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||    
T  1112704 tagaattcacctcaaagtagttgaattccctcgaaacattacatt 1112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 49111429 - 49111373
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaag 126  Q
    |||| ||||||||||| ||||||||| || |||||||||||||||||| ||| ||||    
T  49111429 ttttgagggaattcaactattttgaggtgaattcaaacaatagaattccccttaaag 49111373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 10633116 - 10633041
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||  |||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||| | ||||||    
T  10633116 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaa 10633041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 12914144 - 12914093
Alignment:
Q  41 ctttaagagtgtgtttggatgagagaatattttaagggaattcaattatttt 92  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||| ||||||    
T  12914144 cttttagagtgtgtttggatgagaaaatgttttgagggaattcaactatttt 12914093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 11041040 - 11040998
Alignment:
Q  114 attcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||||||||||||||  ||||| ||||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattcc 11040998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 40548207 - 40548253
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||| ||||||| |||||||||||||| |||||    
T  40548207 caaacaatggaattcaccccaaagtatttgaatttcctcaaaacatt 40548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 42775689 - 42775643
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  42775689 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 1112679 - 1112638
Alignment:
Q  113 aattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    |||||||||||||||||||||||| |||| | ||||||||||    
T  1112679 aattcacctcaaagtagttgaattccctcgaaacattacatt 1112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 1107127 - 1107083
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| ||||||||||||||||| | |||| ||||||||||||    
T  1107127 gaattcatctcaaagtagttgaattccttcaaaacattacattcc 1107083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 7352896 - 7352940
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||  |||||||||||||||| |||||| ||||||||||||    
T  7352896 gaattcaattcaaagtagttgaattccctcaaaacattacattcc 7352940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 28845955 - 28845999
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| ||||||||||||||||| |||||| |||||| |||||    
T  28845955 gaattcaactcaaagtagttgaattccctcaaaacattatattcc 28845999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 20523171 - 20523260
Alignment:
Q  66 aatattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    |||||| | ||||||||||| || |||||| || |||||||||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  20523171 aatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattc 20523260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 15374002 - 15374110
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || |||||| || |||||||||||||||||||||| | |||||||||||| |||||| |||||||||||| |||  |||||||    
T  15374002 ttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctcaaaacattcc 15374101  T
Q  170 tctatccaa 178  Q
     | ||||||    
T  15374102 cccatccaa 15374110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 40643838 - 40643967
Alignment:
Q  48 agtgtgtttggatgagagaa-tattttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagac 146  Q
    |||||||||||||| ||||| | |||| ||||||||||| || ||||||||  |||||||||||||||||||||| ||| |||||||||| |||||| ||    
T  40643838 agtgtgtttggatg-gagaaatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaac 40643935  T
Q  147 attacattccttcatcacattcctctatccaa 178  Q
    |||||||||| |||  ||||||| | ||||||    
T  40643936 attacattccctcaaaacattcccccatccaa 40643967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 32390089 - 32389990
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || |||||| || ||||||| |||||||||||||| | |||||||||||| |||||| | ||||||||||||||  |||||||    
T  32390089 ttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtagttgaattccctcaaaatattacattccttcaaaacattcc 32389990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 3563364 - 3563286
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||| |||  ||||||| ||||||||    
T  3563364 attcaagcaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaa 3563286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 9764455 - 9764369
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||    
T  9764455 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttcc 9764369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 40809383 - 40809468
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    |||| ||||||||||| || ||||||||| |||||||||||| ||||||||| ||||||| ||||||  ||||| |||||||||||    
T  40809383 ttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattc 40809468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 6634057 - 6634120
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaa 134  Q
    |||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  6634057 ttttgagggaattcaattatttcgagt-gaattcaaacaatagaattcacctcaaagtagttgaa 6634120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 32470999 - 32470891
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||| ||||||||||| || ||||||||| ||||||| ||||||||| |||| ||| |||||||||| | |||| |||||||||||| |||  ||||| |    
T  32470999 ttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacattacattccctcaaaacatttc 32470900  T
Q  170 tctatccaa 178  Q
    || ||||||    
T  32470899 tccatccaa 32470891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 2316488 - 2316387
Alignment:
Q  78 gaattcaattattttgagttggattcaaacaatagaattcacc-tcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatcc 176  Q
    |||||||| || |||||| || ||||||||||||||||||||| | |||||||||||||| |||||| | |||||||||| |||  ||||||| | ||||    
T  2316488 gaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatcc 2316389  T
Q  177 aa 178  Q
    ||    
T  2316388 aa 2316387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 25935276 - 25935351
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| ||||||||||||||||| |||||||||||||  |||||||||||| |||  ||||||| | ||||||    
T  25935276 caaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaa 25935351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 28828464 - 28828417
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattc 117  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||    
T  28828464 ttttgagggaattcaattattttgaggtggattcaaacaatagaattc 28828417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 37722880 - 37722933
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||    
T  37722880 caaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattcc 37722933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 2721557 - 2721621
Alignment:
Q  114 attcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 2721621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 15374035 - 15373991
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  15374035 gaattcacctcaaagtagttgaattccctcaaaacattacattcc 15373991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 32390056 - 32390100
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  32390056 gaattcacctcaaagtagttgaattccctcaaaacattacattcc 32390100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 16515099 - 16515146
Alignment:
Q  109 atagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  16515099 atagaattcacctcaaagaagttgaattccctcaaaacattacattcc 16515146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 19533893 - 19533968
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||  |||||||||||||||| ||||||| |||||  |||||||||||| |||  ||||||||| ||||||    
T  19533893 caaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaa 19533968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 22767036 - 22766961
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||| |||||| ||||||| |||||| |||||| ||||| |||  ||||||| | ||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaa 22766961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||||||||||| |||||| |||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 26281262 - 26281308
Alignment:
Q  110 tagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||||    
T  26281262 tagaattcaccttaaagtagttgaattccctcaaaacattacattcc 26281308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  100 attcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 2316463 - 2316507
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||    
T  2316463 gaattcacctcaaagtagttgaattctctcaaaacattacattcc 2316507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Original strand, 9764426 - 9764466
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattcc 9764466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 156
Target Start/End: Original strand, 32470966 - 32471010
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||    
T  32470966 gaattcaactcaaagtagttgaattccctcaaaacattacattcc 32471010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 12479990 - 12479935
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttc 159  Q
    |||||||  |||||||||||||||| |||||||||||||| || ||||||| ||||    
T  12479990 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaactttacatttcttc 12479935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 33245366 - 33245433
Alignment:
Q  111 agaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||| || ||||||||||||||| ||||| |||||||||||| |||  ||||||| | ||||||    
T  33245366 agaattcaacttaaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaa 33245433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 40090400 - 40090451
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacatt 154  Q
    |||||||| ||||||||||||||||| ||||||| | |||| ||||||||||    
T  40090400 caaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatt 40090451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 15804397 - 15804331
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||| ||||||||||||||||| |||||| ||| |||||||| |||  ||||||| | ||||||    
T  15804397 gaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaa 15804331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 16515081 - 16515035
Alignment:
Q  110 tagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||| ||||||||| |||||| || |||||||||    
T  16515081 tagaattcacctcaaagaagttgaattccctcaaaaccttacattcc 16515035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 156
Target Start/End: Complemental strand, 23092079 - 23091993
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||| ||||| ||||| || ||| || || ||||| | ||||||||||| || |||||||||||||| | |||| ||||||||||||    
T  23092079 ttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagtagttgaattccttcaaaacattacattcc 23091993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 33146257 - 33146211
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  33146257 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 16515179 - 16515142
Alignment:
Q  44 taagagtgtgtttggatgagagaatattttaagggaat 81  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  16515179 taagagtgtgtttggatgagagaatgtttttagggaat 16515142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 28490076 - 28490031
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacat 148  Q
    |||||||| ||||||||||||||||| ||||||| |||||| ||||    
T  28490076 caaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 2550384 - 2550348
Alignment:
Q  113 aattcacctcaaagtagttgaatttcctcaagacatt 149  Q
    |||||||||||||||||||||||| |||||| |||||    
T  2550384 aattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 20523208 - 20523164
Alignment:
Q  112 gaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||||||| |||||  | ||||||||||    
T  20523208 gaattcacctcaaagtagttgaattccctcagaatattacattcc 20523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 32390140 - 32390096
Alignment:
Q  37 aatactttaagagtgtgtttggatgagagaatattttaagggaat 81  Q
    |||||| ||||||||||||||||| ||||||| |||| |||||||    
T  32390140 aatactctaagagtgtgtttggattagagaattttttgagggaat 32390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 56282 - 56402
Alignment:
Q  41 ctttaagagtgtgtttggatgagagaatat-----tttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaat 135  Q
    ||||||||||||||||||||| | |||| |     ||| ||||||||||| || |||||| ||  ||||||||||||||||||||| |||||||||||||    
T  56282 ctttaagagtgtgtttggatgggggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaat 56381  T
Q  136 ttcctcaagacattacattcc 156  Q
    | |||||| ||||||| ||||    
T  56382 tccctcaaaacattactttcc 56402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 56345 - 56305
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattcc 56305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 4159 - 4084
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    |||||||||||||||||||||||||| ||||||| |||||| |||||||||||  |||  |||||||| |||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaa 4084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 42076 - 42013
Alignment:
Q  108 aatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctc 171  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||| |||  |||||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctc 42013  T

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Target: scaffold0048 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 83025 - 82974
Alignment:
Q  105 aacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 82974  T

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Target: scaffold1562 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 522 - 442
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatta 150  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||   ||||||||||||| |||||| ||||||    
T  522 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacatta 442  T

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Target: scaffold1562; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 493 - 555
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 555  T

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Target: scaffold1158 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 2071 - 2151
Alignment:
Q  70 ttttaagggaattcaattattttgagttggattcaaacaatagaattcacctcaaagtagttgaatttcctcaagacatta 150  Q
    |||| ||||||||||| || |||||| ||  ||||||||||||||||||||   ||||||||||||| |||||| ||||||    
T  2071 ttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtagttgaattccctcaaaacatta 2151  T

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Target: scaffold1158; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 2100 - 2038
Alignment:
Q  116 tcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcctctatccaa 178  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||  ||||||| | ||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaa 2038  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 10970 - 10917
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    |||||||| |||||||| |||||||| ||||||| |||||| ||||||||||||    
T  10970 caaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattcc 10917  T

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Target: scaffold0400 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 4487 - 4553
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||| ||||||||| |||| || |||||||||||||| |||||| ||||| |||  |||||||    
T  4487 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattcc 4553  T

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Target: scaffold0365 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 5131 - 5197
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattccttcatcacattcc 169  Q
    |||||||| ||||||||| |||| || |||||||||||||| |||||| ||||| |||  |||||||    
T  5131 caaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattcc 5197  T

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Target: scaffold0318 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 2950 - 2899
Alignment:
Q  103 caaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattc 155  Q
    |||||||| |||||||||||||| || ||||||| |||||| |||||||||||    
T  2950 caaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattc 2899  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 19280 - 19229
Alignment:
Q  104 aaacaatagaattcacctcaaagtagttgaatttcctcaagacattacattcc 156  Q
    ||||||| |||||||||||||| || ||||| |||||||| ||||||||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaa-ttcctcaaaacattacattcc 19229  T

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