View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6266_low_9 (Length: 249)
Name: NF6266_low_9
Description: NF6266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6266_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 16956107 - 16955860
Alignment:
| Q |
1 |
tttcttttgtcatagttatcatatttatgagtgtaattcttgaacgattttcatttttaagagggaaacattttaaagggcgatatgattgtgactaaac |
100 |
Q |
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| T |
16956107 |
tttcttttgtcatagttatcatatttatgagtgtaattcttgaacgattttcatttttaagagggaaacattttaaagggcgatatgattgtgactaaac |
16956008 |
T |
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| Q |
101 |
ctactaatctcttcaatgataatttttnnnnnnnnnnttcgaattccaaaaaactacaatatttaccctcgcataagcaaacattcatttaaaattttat |
200 |
Q |
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| T |
16956007 |
ctactaatctcttcaatgataatttttaaaaaaaaaattcgaattccaaaaaactacaatatttaccctcgcataagcaaacattcatttaaaattttat |
16955908 |
T |
|
| Q |
201 |
tgttgttttccctgtttctttctaatctttttgccctatgcttctcct |
248 |
Q |
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||||||||||||||||||||||||||||||||||| |||| ||||||| |
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| T |
16955907 |
tgttgttttccctgtttctttctaatctttttgccgtatgattctcct |
16955860 |
T |
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