View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6273_high_11 (Length: 326)
Name: NF6273_high_11
Description: NF6273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6273_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 12794976 - 12795270
Alignment:
| Q |
16 |
acaaaaacactatcacttttgaaacatcacaatttttccacacttttcccacctccccgagtaaaaaggaggaataaattcccaacataaatatagatag |
115 |
Q |
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| T |
12794976 |
acaaaaacactatcacttttgaaacatcacaacgtttccacacttttcccacctccccgattaaaaaggaggaataaattcccgacataaatatagatag |
12795075 |
T |
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| Q |
116 |
gtagaattcacaacagtgaacgtgctatagttgtgcatcaaatgagttcgatcaatttcgggccacaaacctcaaactagagttgaacaaaatatgtgta |
215 |
Q |
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||||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12795076 |
gtagaattcacaacagtgaacgtactatggttgtgcatcaaacgagttcggtcaatttcgggccacaaacctcaaactagagttgaacaaaatatgtgta |
12795175 |
T |
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| Q |
216 |
taactcagccatttctggtcgtttttgacatttgattggtcagttggcggtctgttcagtttggaggattcactggtggg-ttattcagtctctg |
309 |
Q |
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|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| |
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| T |
12795176 |
taactcagccatttctggtcatttttgacgtttgattggtcagttggcggtctgttcagtttggaggattcactaatgggtttattcagtttctg |
12795270 |
T |
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