View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6273_high_19 (Length: 250)
Name: NF6273_high_19
Description: NF6273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6273_high_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 44947616 - 44947850
Alignment:
| Q |
16 |
tcaaatatggtggtgatggcgcaacaaactaattgcaagttttggtggatttgtgtttgtgttcagtatatataatttgttgaaggttcgtcgagacagt |
115 |
Q |
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| T |
44947616 |
tcaaatatggtggtgatggcgcaacaaactaattgcaagttttggtggatttgtgtttgtgttcagtatatataatttgttgaaggttcgtcgagacagt |
44947715 |
T |
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| Q |
116 |
ttgtcaccaaactgtttaggtttttctgaacaatgaattggccttgggcttaattgtcatcccatataagtcaaatcaattttgggtacttgagtttaaa |
215 |
Q |
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| T |
44947716 |
ttgtcaccaaactgtttagttttttctgaacaatgaattggccttgggcttaattgtcatcccatataagtcaaatcaattttgggtacttgagtttaaa |
44947815 |
T |
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| Q |
216 |
gtcgactcaacgattcttttacttagctttccgtt |
250 |
Q |
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||| ||||||||||||||||||||||||||||||| |
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| T |
44947816 |
gtcaactcaacgattcttttacttagctttccgtt |
44947850 |
T |
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