View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6273_low_11 (Length: 329)
Name: NF6273_low_11
Description: NF6273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6273_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 29 - 321
Target Start/End: Original strand, 37600236 - 37600528
Alignment:
| Q |
29 |
agaagagcataatagaaagagaagaaagtcaaagtcaaatataaaattaatgtattatcaattgttgcatcttgtaactaggggtgagaataagtttgat |
128 |
Q |
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| T |
37600236 |
agaagagcataatagaaagagaagaaagtcaaagtcaaatataaaattaatgtattatcaattgttgcatcttgtaactaggggtgagaataaatttgat |
37600335 |
T |
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| Q |
129 |
gagtctacggtatagtctacgaactcagtttagatcagacnnnnnnnncaaaaacatataaaaccaaggcttttttataagtgtattcaactaaaagata |
228 |
Q |
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| T |
37600336 |
gggtctacggtctagtctacgaacttaatttagattagacttttttttcaaaaacatataaaaccaaggcttttttataagtgtattcaactaaaagata |
37600435 |
T |
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| Q |
229 |
tgcttacatgcgaaaacggagtgagtaatggacaacgtggtttttacaagatgtttcaatcaacctctcaccctgattgttacatcctttgct |
321 |
Q |
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| T |
37600436 |
tgcttacatgcgaaaacggagtgagtaatggacaatgtagtttttacaagatgtttcaatcaacctctcaccctgattgttacatcctttgct |
37600528 |
T |
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