View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6276_high_12 (Length: 337)
Name: NF6276_high_12
Description: NF6276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6276_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 11 - 304
Target Start/End: Complemental strand, 28190459 - 28190167
Alignment:
| Q |
11 |
cacagatatacagataaaaaatactataacattaaatgtaacgagatggaagctactgttcctttgcactgcatgagagattcatatagctatgattgta |
110 |
Q |
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| T |
28190459 |
cacagatatacagataaaaa-tactataacattaaatgtaacgagatggcagctactgttcctttgcactgcatgagagattcatatagctatgattgta |
28190361 |
T |
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| Q |
111 |
catgtttaaaaatgcatgtaatgattattatgatggtaatagaagacgaagcaaagtggtgatgatgaagatgtgtaccaattttgaaggtaatgaatgg |
210 |
Q |
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| T |
28190360 |
catgtttaaaaatgcatgtaatgattattatgatggtaatagaagacgaagcaaagtggtgatgatgaagatgtgtaccaattttgaaggtaatgaatgg |
28190261 |
T |
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| Q |
211 |
cagtggatcattgtgtggcagagaggaaaaacatagatttctaatttgaatgtaaggtaaggtgaaatatattggtgatgttgaggtggaccac |
304 |
Q |
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| T |
28190260 |
cagtggatcattgtgtggcagagaggaaaaacatagatttctaatttgaatgtaaggtaaggtgaaatatattggtgatgttgaggtggaccac |
28190167 |
T |
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