View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6276_high_15 (Length: 273)
Name: NF6276_high_15
Description: NF6276
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6276_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 25194593 - 25194831
Alignment:
| Q |
22 |
tgacgcgttttgagtagagaatgaggtgtcttccttgatatcctagccttatataccggttttatgtacatttttcaagtgagagtttgagatacttgta |
121 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
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| T |
25194593 |
tgacgcgttttgagtagagaatgaggtgccttccttgatatcctagccttatataccggttttatgtacatttttcaagtgagagtgtaagatacttgta |
25194692 |
T |
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| Q |
122 |
tgagaccaaaggagaaaatttttagaaaacttaaatgctaagagttaggtgttttgggcgagattattgagtttggaaacattctaaataacttggatag |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
25194693 |
tgagaccaaaggagaaaatttttagaaaacttaaatgctaagagttaggtgttttgggtgagattattgagtttggaaacattctaaataacttggatag |
25194792 |
T |
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| Q |
222 |
tgatatctaattggaggaaagacctaagatttatgtctt |
260 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
25194793 |
tgatatctaattggaggaaagacctaagatttatgtctt |
25194831 |
T |
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