View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6277_high_16 (Length: 437)

Name: NF6277_high_16
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6277_high_16
NF6277_high_16
[»] chr4 (82 HSPs)
chr4 (18-113)||(11592281-11592376)
chr4 (18-113)||(11645743-11645838)
chr4 (300-377)||(11645873-11645950)
chr4 (180-299)||(4550398-4550517)
chr4 (180-301)||(51224724-51224845)
chr4 (180-301)||(56025320-56025441)
chr4 (189-300)||(8026651-8026762)
chr4 (189-291)||(55642501-55642603)
chr4 (189-302)||(5208212-5208325)
chr4 (180-299)||(1796430-1796547)
chr4 (187-299)||(24019859-24019973)
chr4 (180-299)||(27001297-27001416)
chr4 (173-299)||(47105968-47106094)
chr4 (206-299)||(9032870-9032963)
chr4 (180-301)||(37022325-37022446)
chr4 (180-302)||(43434404-43434514)
chr4 (180-301)||(44368088-44368209)
chr4 (180-301)||(51377179-51377300)
chr4 (189-299)||(24235393-24235503)
chr4 (189-299)||(31221486-31221596)
chr4 (189-283)||(46844145-46844239)
chr4 (206-291)||(32901419-32901504)
chr4 (206-283)||(36728526-36728603)
chr4 (189-301)||(7037370-7037482)
chr4 (195-291)||(41495092-41495188)
chr4 (180-300)||(45548671-45548791)
chr4 (210-302)||(53384227-53384318)
chr4 (195-302)||(3223068-3223175)
chr4 (180-255)||(54165091-54165168)
chr4 (206-291)||(15638220-15638305)
chr4 (183-255)||(5466427-5466499)
chr4 (207-291)||(20632544-20632628)
chr4 (180-301)||(31048952-31049061)
chr4 (195-299)||(49424708-49424812)
chr4 (180-300)||(55267888-55268008)
chr4 (201-252)||(29406972-29407023)
chr4 (180-251)||(40721900-40721971)
chr4 (180-303)||(42177934-42178057)
chr4 (180-304)||(45779186-45779298)
chr4 (206-291)||(610896-610982)
chr4 (208-302)||(4971898-4971992)
chr4 (183-253)||(45923446-45923515)
chr4 (180-298)||(52669498-52669616)
chr4 (209-299)||(53662330-53662420)
chr4 (206-291)||(2193705-2193790)
chr4 (195-300)||(19910889-19910994)
chr4 (206-291)||(32365563-32365648)
chr4 (206-303)||(36512932-36513028)
chr4 (208-260)||(35580202-35580254)
chr4 (211-255)||(45176665-45176709)
chr4 (180-255)||(20956514-20956589)
chr4 (206-269)||(43358703-43358766)
chr4 (180-247)||(44170559-44170626)
chr4 (195-269)||(9162145-9162219)
chr4 (206-300)||(33483993-33484087)
chr4 (206-300)||(47519607-47519701)
chr4 (266-300)||(54165058-54165092)
chr4 (262-295)||(439294-439327)
chr4 (206-255)||(1562468-1562517)
chr4 (254-299)||(12694316-12694361)
chr4 (211-300)||(13182426-13182515)
chr4 (206-291)||(13267375-13267459)
chr4 (206-291)||(18568711-18568796)
chr4 (206-291)||(20056472-20056557)
chr4 (208-300)||(24154704-24154794)
chr4 (206-255)||(36812335-36812384)
chr4 (195-248)||(39844197-39844250)
chr4 (206-255)||(39880962-39881011)
chr4 (267-300)||(45923517-45923550)
chr4 (206-255)||(48743800-48743849)
chr4 (195-291)||(8681020-8681116)
chr4 (195-255)||(12241137-12241196)
chr4 (195-259)||(19245967-19246031)
chr4 (180-264)||(29949596-29949680)
chr4 (211-299)||(30866445-30866533)
chr4 (201-269)||(31413704-31413772)
chr4 (195-255)||(33820269-33820328)
chr4 (201-265)||(36792417-36792481)
chr4 (201-269)||(38952774-38952842)
chr4 (195-255)||(40756000-40756060)
chr4 (207-255)||(41119458-41119506)
chr4 (194-238)||(46173615-46173659)
[»] scaffold0576 (1 HSPs)
scaffold0576 (184-305)||(9498-9619)
[»] chr6 (32 HSPs)
chr6 (184-305)||(15364727-15364848)
chr6 (180-305)||(15328553-15328678)
chr6 (180-301)||(25924750-25924871)
chr6 (180-301)||(32784802-32784923)
chr6 (180-301)||(34413155-34413276)
chr6 (180-296)||(28965731-28965847)
chr6 (180-299)||(237286-237405)
chr6 (209-300)||(2881426-2881517)
chr6 (189-290)||(6435109-6435210)
chr6 (180-296)||(3660244-3660360)
chr6 (201-298)||(3339388-3339485)
chr6 (209-297)||(2862165-2862253)
chr6 (209-304)||(1803962-1804057)
chr6 (209-291)||(27334957-27335039)
chr6 (209-291)||(27395697-27395779)
chr6 (183-255)||(26668563-26668635)
chr6 (180-303)||(2056847-2056970)
chr6 (189-291)||(12441600-12441702)
chr6 (180-298)||(17902581-17902699)
chr6 (195-300)||(11017461-11017566)
chr6 (180-298)||(31368501-31368615)
chr6 (201-281)||(17835697-17835777)
chr6 (206-302)||(21210346-21210442)
chr6 (195-238)||(2886694-2886737)
chr6 (195-305)||(9954627-9954737)
chr6 (206-284)||(11635707-11635783)
chr6 (206-296)||(29376607-29376697)
chr6 (206-291)||(1688269-1688354)
chr6 (250-291)||(2689086-2689127)
chr6 (206-278)||(4923036-4923108)
chr6 (195-243)||(16533204-16533252)
chr6 (201-265)||(24437529-24437592)
[»] chr3 (56 HSPs)
chr3 (180-299)||(40478175-40478294)
chr3 (180-299)||(41877752-41877871)
chr3 (180-302)||(45295624-45295746)
chr3 (183-291)||(25542867-25542975)
chr3 (180-303)||(31007233-31007359)
chr3 (180-298)||(42718185-42718301)
chr3 (177-300)||(14992134-14992259)
chr3 (180-270)||(25142692-25142782)
chr3 (180-299)||(52453980-52454099)
chr3 (180-302)||(34021348-34021470)
chr3 (189-299)||(35756053-35756163)
chr3 (180-305)||(11327172-11327297)
chr3 (180-300)||(13159725-13159845)
chr3 (206-301)||(43900862-43900957)
chr3 (180-303)||(50879659-50879782)
chr3 (189-303)||(50279971-50280085)
chr3 (180-301)||(28263609-28263730)
chr3 (189-302)||(30400041-30400154)
chr3 (206-291)||(54233397-54233482)
chr3 (180-300)||(8254091-8254211)
chr3 (189-301)||(36819029-36819141)
chr3 (180-303)||(23163029-23163152)
chr3 (206-292)||(2009744-2009829)
chr3 (206-291)||(23906883-23906968)
chr3 (177-298)||(44855312-44855433)
chr3 (206-291)||(51717531-51717616)
chr3 (180-296)||(20714307-20714423)
chr3 (180-300)||(46344478-46344598)
chr3 (195-303)||(53102786-53102894)
chr3 (180-299)||(3957906-3958025)
chr3 (206-291)||(43441760-43441845)
chr3 (186-291)||(50652458-50652563)
chr3 (180-300)||(3069462-3069582)
chr3 (247-298)||(7039123-7039174)
chr3 (206-265)||(32687882-32687941)
chr3 (209-296)||(32931809-32931896)
chr3 (189-248)||(37303013-37303072)
chr3 (189-291)||(47056421-47056524)
chr3 (206-269)||(47484369-47484432)
chr3 (206-260)||(3483209-3483263)
chr3 (201-255)||(7949873-7949927)
chr3 (206-291)||(9027963-9028047)
chr3 (195-248)||(26279963-26280016)
chr3 (195-296)||(27162358-27162459)
chr3 (195-248)||(32457694-32457747)
chr3 (204-301)||(38957402-38957499)
chr3 (195-291)||(1208025-1208120)
chr3 (206-238)||(1765483-1765515)
chr3 (195-303)||(11173529-11173636)
chr3 (250-290)||(20080082-20080122)
chr3 (396-436)||(21960568-21960608)
chr3 (220-300)||(23183606-23183686)
chr3 (195-270)||(33007439-33007515)
chr3 (257-301)||(42864202-42864246)
chr3 (195-291)||(49130933-49131028)
chr3 (223-259)||(52678521-52678557)
[»] chr5 (43 HSPs)
chr5 (179-299)||(7077227-7077347)
chr5 (180-303)||(30574261-30574384)
chr5 (180-302)||(36548265-36548387)
chr5 (180-301)||(19271923-19272044)
chr5 (180-299)||(26685755-26685874)
chr5 (180-299)||(26955486-26955605)
chr5 (180-304)||(12512857-12512981)
chr5 (180-296)||(32634772-32634888)
chr5 (180-299)||(3263396-3263515)
chr5 (180-299)||(15622108-15622227)
chr5 (180-303)||(38010936-38011059)
chr5 (189-302)||(11464008-11464121)
chr5 (180-301)||(12417690-12417811)
chr5 (180-255)||(31006123-31006196)
chr5 (206-301)||(30776709-30776804)
chr5 (180-302)||(35972638-35972756)
chr5 (206-300)||(4292873-4292967)
chr5 (189-302)||(3154528-3154641)
chr5 (206-291)||(8959250-8959335)
chr5 (180-305)||(9594542-9594667)
chr5 (180-276)||(28501681-28501777)
chr5 (180-296)||(33823585-33823701)
chr5 (180-299)||(9596702-9596821)
chr5 (180-255)||(41192651-41192726)
chr5 (180-302)||(22920377-22920499)
chr5 (206-291)||(17489438-17489523)
chr5 (180-299)||(4954530-4954649)
chr5 (189-299)||(10522848-10522958)
chr5 (195-267)||(34381091-34381163)
chr5 (206-289)||(12401282-12401365)
chr5 (180-299)||(25345402-25345521)
chr5 (195-265)||(10232578-10232648)
chr5 (195-265)||(12661869-12661939)
chr5 (266-304)||(34888846-34888884)
chr5 (206-291)||(372616-372701)
chr5 (206-291)||(14914460-14914544)
chr5 (206-291)||(20719912-20719996)
chr5 (186-259)||(25038150-25038223)
chr5 (266-299)||(31006195-31006228)
chr5 (206-255)||(32873081-32873130)
chr5 (180-252)||(16553568-16553640)
chr5 (195-255)||(36415994-36416054)
chr5 (195-291)||(39595353-39595448)
[»] chr7 (45 HSPs)
chr7 (180-307)||(33881585-33881712)
chr7 (154-299)||(5900926-5901069)
chr7 (211-299)||(17157228-17157316)
chr7 (209-300)||(29609764-29609856)
chr7 (180-299)||(26041374-26041493)
chr7 (180-299)||(27164725-27164844)
chr7 (180-299)||(30864305-30864424)
chr7 (206-291)||(10014851-10014936)
chr7 (206-291)||(25614717-25614802)
chr7 (206-291)||(42060747-42060832)
chr7 (180-301)||(44511203-44511324)
chr7 (195-299)||(39369381-39369485)
chr7 (180-299)||(33050247-33050366)
chr7 (180-291)||(42431787-42431898)
chr7 (189-303)||(38978565-38978678)
chr7 (180-299)||(116695-116814)
chr7 (210-299)||(30402081-30402168)
chr7 (198-291)||(42476464-42476557)
chr7 (195-243)||(2469771-2469819)
chr7 (180-300)||(20406605-20406725)
chr7 (180-300)||(29162166-29162286)
chr7 (209-299)||(23330002-23330090)
chr7 (209-298)||(3344955-3345044)
chr7 (206-291)||(8742473-8742558)
chr7 (230-299)||(16645554-16645623)
chr7 (230-299)||(17619915-17619984)
chr7 (189-301)||(19880117-19880229)
chr7 (206-291)||(37385129-37385214)
chr7 (206-259)||(42640933-42640986)
chr7 (206-291)||(47530187-47530272)
chr7 (206-302)||(25332385-25332480)
chr7 (189-299)||(2346947-2347057)
chr7 (195-265)||(19426659-19426728)
chr7 (195-269)||(22331129-22331203)
chr7 (189-303)||(43255451-43255565)
chr7 (195-265)||(47424908-47424977)
chr7 (206-255)||(21037168-21037217)
chr7 (206-255)||(21153142-21153191)
chr7 (195-248)||(30862715-30862768)
chr7 (195-248)||(30982293-30982346)
chr7 (195-248)||(36990120-36990173)
chr7 (206-291)||(44894371-44894455)
chr7 (195-243)||(34348971-34349019)
chr7 (206-278)||(37325728-37325800)
chr7 (189-301)||(37392116-37392228)
[»] scaffold0115 (1 HSPs)
scaffold0115 (180-298)||(35382-35500)
[»] chr2 (55 HSPs)
chr2 (183-299)||(30413620-30413736)
chr2 (180-303)||(43936345-43936466)
chr2 (180-300)||(33003887-33004007)
chr2 (180-298)||(12175217-12175335)
chr2 (180-300)||(10550346-10550466)
chr2 (180-300)||(38021420-38021539)
chr2 (180-299)||(44484544-44484663)
chr2 (204-301)||(36582344-36582441)
chr2 (180-296)||(37966420-37966536)
chr2 (180-259)||(27540079-27540158)
chr2 (180-301)||(3195973-3196094)
chr2 (187-300)||(33029989-33030102)
chr2 (206-291)||(5962728-5962813)
chr2 (183-296)||(22353066-22353179)
chr2 (195-283)||(30973895-30973983)
chr2 (201-299)||(23047971-23048069)
chr2 (189-303)||(29871239-29871353)
chr2 (180-301)||(6884974-6885095)
chr2 (195-291)||(12192026-12192122)
chr2 (206-293)||(9694955-9695042)
chr2 (180-287)||(36383526-36383633)
chr2 (180-302)||(30192236-30192358)
chr2 (206-291)||(36909740-36909824)
chr2 (240-300)||(4097068-4097128)
chr2 (180-300)||(38246638-38246758)
chr2 (180-299)||(29893674-29893793)
chr2 (195-265)||(34138959-34139030)
chr2 (195-301)||(23391141-23391247)
chr2 (206-291)||(26809579-26809665)
chr2 (206-291)||(12358403-12358488)
chr2 (206-255)||(13466007-13466056)
chr2 (195-264)||(14954522-14954591)
chr2 (206-299)||(33857307-33857400)
chr2 (209-301)||(27307131-27307223)
chr2 (180-252)||(39133786-39133858)
chr2 (180-255)||(1298258-1298333)
chr2 (180-299)||(3298993-3299112)
chr2 (180-255)||(6851591-6851666)
chr2 (195-302)||(28165208-28165315)
chr2 (394-437)||(37480090-37480133)
chr2 (189-243)||(6639416-6639470)
chr2 (261-299)||(6851559-6851597)
chr2 (195-261)||(19913863-19913929)
chr2 (195-265)||(26321620-26321689)
chr2 (200-258)||(34101073-34101131)
chr2 (189-255)||(39744526-39744592)
chr2 (252-301)||(4061983-4062032)
chr2 (201-270)||(13104564-13104633)
chr2 (195-248)||(23880174-23880227)
chr2 (201-270)||(32750083-32750152)
chr2 (206-267)||(41353417-41353478)
chr2 (195-243)||(16051332-16051380)
chr2 (269-301)||(27540156-27540188)
chr2 (195-255)||(31635742-31635802)
chr2 (195-291)||(38572018-38572114)
[»] chr8 (63 HSPs)
chr8 (204-302)||(11089664-11089763)
chr8 (180-303)||(43587705-43587828)
chr8 (180-299)||(34972131-34972248)
chr8 (180-299)||(38504234-38504353)
chr8 (180-299)||(43602311-43602430)
chr8 (184-296)||(23952562-23952673)
chr8 (180-303)||(1065481-1065604)
chr8 (180-299)||(30927819-30927938)
chr8 (180-303)||(41273579-41273702)
chr8 (206-299)||(6105323-6105416)
chr8 (195-303)||(6825161-6825269)
chr8 (180-296)||(41293613-41293728)
chr8 (189-299)||(39258943-39259053)
chr8 (206-291)||(11138986-11139071)
chr8 (180-300)||(19723093-19723213)
chr8 (207-291)||(30129500-30129584)
chr8 (180-255)||(29509330-29509405)
chr8 (201-291)||(2597056-2597146)
chr8 (206-296)||(33817247-33817337)
chr8 (206-291)||(5925145-5925230)
chr8 (209-302)||(14228786-14228879)
chr8 (178-299)||(14531683-14531804)
chr8 (195-291)||(37562037-37562133)
chr8 (180-299)||(40211635-40211754)
chr8 (189-247)||(6849408-6849466)
chr8 (195-265)||(11879412-11879482)
chr8 (195-265)||(11896828-11896898)
chr8 (189-291)||(36064103-36064205)
chr8 (189-291)||(36497734-36497836)
chr8 (206-291)||(43186386-43186469)
chr8 (206-291)||(5924900-5924985)
chr8 (250-303)||(12783762-12783815)
chr8 (206-291)||(34765746-34765831)
chr8 (195-300)||(36593673-36593778)
chr8 (195-260)||(37033029-37033093)
chr8 (206-259)||(39153612-39153665)
chr8 (180-272)||(13884380-13884472)
chr8 (189-265)||(30925577-30925652)
chr8 (195-255)||(40719576-40719636)
chr8 (189-303)||(6745926-6746041)
chr8 (209-267)||(41519951-41520010)
chr8 (196-259)||(44086440-44086503)
chr8 (189-299)||(6656227-6656337)
chr8 (189-299)||(6736629-6736739)
chr8 (201-291)||(7129618-7129707)
chr8 (190-291)||(8888326-8888428)
chr8 (189-299)||(20288606-20288716)
chr8 (189-299)||(21075235-21075345)
chr8 (195-269)||(22836057-22836131)
chr8 (195-303)||(34474028-34474137)
chr8 (206-296)||(35595300-35595390)
chr8 (251-300)||(9208065-9208114)
chr8 (222-303)||(13565402-13565483)
chr8 (262-303)||(27630893-27630934)
chr8 (195-248)||(28473484-28473537)
chr8 (206-255)||(30608642-30608691)
chr8 (211-300)||(34970300-34970389)
chr8 (189-238)||(39027557-39027606)
chr8 (183-243)||(11114613-11114673)
chr8 (194-270)||(22767208-22767284)
chr8 (209-301)||(37568498-37568590)
chr8 (195-243)||(40102102-40102150)
chr8 (395-435)||(40791915-40791955)
[»] chr1 (47 HSPs)
chr1 (180-301)||(10385478-10385599)
chr1 (180-299)||(43195977-43196096)
chr1 (187-302)||(49189096-49189211)
chr1 (180-300)||(5383823-5383943)
chr1 (180-300)||(37669462-37669582)
chr1 (180-264)||(2257617-2257701)
chr1 (180-302)||(6829670-6829792)
chr1 (180-290)||(36669267-36669377)
chr1 (180-301)||(13813622-13813743)
chr1 (206-303)||(19920852-19920949)
chr1 (180-300)||(27578246-27578366)
chr1 (180-299)||(26501359-26501478)
chr1 (183-274)||(39669873-39669964)
chr1 (180-299)||(50035426-50035545)
chr1 (180-302)||(3291310-3291432)
chr1 (206-291)||(42843240-42843325)
chr1 (180-300)||(7371835-7371955)
chr1 (195-291)||(50777319-50777415)
chr1 (180-291)||(9011709-9011820)
chr1 (189-291)||(50797853-50797955)
chr1 (206-259)||(10302271-10302324)
chr1 (180-301)||(25130767-25130888)
chr1 (180-301)||(25995524-25995647)
chr1 (195-299)||(27895649-27895752)
chr1 (180-303)||(29489243-29489366)
chr1 (189-255)||(29362624-29362690)
chr1 (206-259)||(8670162-8670215)
chr1 (206-291)||(51193029-51193114)
chr1 (260-300)||(24749629-24749669)
chr1 (261-301)||(27563617-27563657)
chr1 (195-255)||(42615936-42615996)
chr1 (183-291)||(43457716-43457823)
chr1 (192-291)||(7078396-7078495)
chr1 (195-265)||(15061924-15061994)
chr1 (180-238)||(26585122-26585180)
chr1 (222-291)||(46902708-46902778)
chr1 (207-260)||(366748-366801)
chr1 (197-258)||(4618725-4618786)
chr1 (195-303)||(22389411-22389517)
chr1 (183-252)||(27563551-27563620)
chr1 (266-303)||(51704683-51704720)
chr1 (180-237)||(51704737-51704794)
chr1 (223-259)||(3606024-3606060)
chr1 (189-257)||(8905801-8905869)
chr1 (194-270)||(25302562-25302638)
chr1 (195-299)||(35043608-35043712)
chr1 (195-291)||(40610308-40610403)
[»] scaffold0172 (1 HSPs)
scaffold0172 (180-299)||(17039-17158)
[»] scaffold0514 (1 HSPs)
scaffold0514 (195-300)||(1383-1488)
[»] scaffold0085 (1 HSPs)
scaffold0085 (180-299)||(31188-31307)
[»] scaffold0002 (1 HSPs)
scaffold0002 (180-300)||(147143-147263)
[»] scaffold0522 (1 HSPs)
scaffold0522 (195-299)||(2392-2496)
[»] scaffold0004 (1 HSPs)
scaffold0004 (206-301)||(249028-249123)
[»] scaffold0121 (1 HSPs)
scaffold0121 (186-302)||(29852-29969)
[»] scaffold0119 (1 HSPs)
scaffold0119 (183-255)||(2158-2230)
[»] scaffold0027 (1 HSPs)
scaffold0027 (183-291)||(5146-5254)
[»] scaffold0011 (1 HSPs)
scaffold0011 (195-299)||(18674-18777)
[»] scaffold0193 (1 HSPs)
scaffold0193 (206-300)||(24763-24857)
[»] scaffold0054 (1 HSPs)
scaffold0054 (195-269)||(31518-31592)
[»] scaffold0003 (1 HSPs)
scaffold0003 (201-302)||(88893-88994)
[»] scaffold0618 (1 HSPs)
scaffold0618 (180-300)||(3424-3545)
[»] scaffold0049 (1 HSPs)
scaffold0049 (206-291)||(72067-72152)


Alignment Details
Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 11592376 - 11592281
Alignment:
Q  18 gtgttatgcaaacttggaaccttttggcttctcttttgactgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 113  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11592376 gtgttatgcaatcttggaaccttttggcttctcttttgactgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 11592281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 11645743 - 11645838
Alignment:
Q  18 gtgttatgcaaacttggaaccttttggcttctcttttgactgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 113  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645743 gtgttatgcaatcttggaaccttttggcttctcttttgactgtttttgttaactctgtttacttggagcctagggccactaaggtatgttctagct 11645838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 300 - 377
Target Start/End: Original strand, 11645873 - 11645950
Alignment:
Q  300 ttttcaattgctgctcacatttcatattgttttagtttgactatttagcttaattgattgataaaaatttatgttgat 377  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11645873 ttttcaattgctgctcacatttcatattgttttagtttgactatttagcttaattgattgataaaaatttatgttgat 11645950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 4550398 - 4550517
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  4550398 atgatgttattatcctctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatgg 4550497  T
Q  280 atgtacaaatattattgctc 299  Q
    ||||| |||||| |||||||    
T  4550498 atgtataaatatcattgctc 4550517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 51224845 - 51224724
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| || | |||||||||| |||| ||||| ||||||||||| ||||||||||||| || |||||||| ||||||||||||||    
T  51224845 atgatgttattatcctctctctttctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatgg 51224746  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  51224745 atgtacaaatatcattgctctt 51224724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 56025320 - 56025441
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||| ||||||| |||||||| |||||||||||||     
T  56025320 atgatgttgttatcctctctgttcctttttctctctccattgtttttgaccaatcaaaagagagaaaatcaaagttgtcaccaaagttgtcattaaatga 56025419  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  56025420 atgtacaaatatcattgctctt 56025441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 8026762 - 8026651
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| |||||||  ||||||||||||||    
T  8026762 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatggatgtacaaa 8026663  T
Q  289 tattattgctct 300  Q
    ||| ||||||||    
T  8026662 tatcattgctct 8026651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 55642603 - 55642501
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||| |||| |||  ||| ||| ||| |||||||| || ||||||| ||||||||||||    
T  55642603 ttatcctctctcttcctttttctctctccattattttttaccaataaaaagagataaaagcaaggttgtcaccaaagttatcattaattggatgtacaaa 55642504  T
Q  289 tat 291  Q
    |||    
T  55642503 tat 55642501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 5208325 - 5208212
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  5208325 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 5208226  T
Q  289 tattattgctcttt 302  Q
    ||| ||||||||||    
T  5208225 tatcattgctcttt 5208212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 1796430 - 1796547
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||||| | |||| ||| |||||||  |||||    
T  1796430 atgatgtt-ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaag-tgtcactaaagttgtcatggaatgg 1796527  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  1796528 atgtacaaatatcattgctc 1796547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 299
Target Start/End: Complemental strand, 24019973 - 24019859
Alignment:
Q  187 tattatcttctctattcccttttctctctc--cattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 284  Q
    ||||||| ||||| |||| |||||||||||  || | ||||| ||||||||||| ||||  |||||| ||| |||||||| |||||||||||| ||||||    
T  24019973 tattatcctctctcttcctttttctctctctccaatgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgta 24019874  T
Q  285 caaatattattgctc 299  Q
    ||||||| |||||||    
T  24019873 caaatatcattgctc 24019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 27001416 - 27001297
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  27001416 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 27001317  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  27001316 atgtacaaatatcattgctc 27001297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 173 - 299
Target Start/End: Original strand, 47105968 - 47106094
Alignment:
Q  173 tacacagatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcat 272  Q
    |||||| |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||    
T  47105968 tacacacatgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcat 47106067  T
Q  273 taaatggatgtacaaatattattgctc 299  Q
      ||||||||||||||||| |||||||    
T  47106068 ggaatggatgtacaaatatcattgctc 47106094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 299
Target Start/End: Original strand, 9032870 - 9032963
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||| || |||||||||||||||||| |||||||    
T  9032870 ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgtaatgaaatggatgtacaaatatcattgctc 9032963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 37022325 - 37022446
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| |||| |||||||||| ||||| |||||| |||| | || |||||||  ||||||| ||| ||||||| ||||||    
T  37022325 atgatggtcttatcatctctcttcctttttatctctccattgtttttgaccaataaaaaaaaagaaaaacaagattatcactaaagttgtcatgaaatgg 37022424  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| || ||||||    
T  37022425 atgtacaaatatcatcgctctt 37022446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 43434404 - 43434514
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||||||||||| |||||| |||| |||||||| |||||| ||||| ||||||||||| | ||||||||||||            ||||||||||||||    
T  43434404 atgatgttattattttctctcttcctttttctctgtccattgtttttgaccaatcaaaagataggaaaacaaag------------ttgtcattaaatgg 43434491  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||||||||||    
T  43434492 atgtacaaatatcattgctcttt 43434514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 44368209 - 44368088
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| |||| || ||| |||| ||| ||||||| ||||||    
T  44368209 atgatggtcttatcatctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatgg 44368110  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  44368109 atgtacaaatatcattgctctt 44368088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 51377300 - 51377179
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||   |||||    
T  51377300 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcaaggaatgg 51377201  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  51377200 atgtacaaatatcattgctctt 51377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 24235393 - 24235503
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||  ||| || |||| ||| ||||||| |||||||||||||||    
T  24235393 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaattaaaattgtcactaaagttgtcatgaaatggatgtacaaa 24235492  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  24235493 tatcattgctc 24235503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 31221486 - 31221596
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| |||||||||||  ||| ||||||||||    
T  31221486 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaaattgtcatggaattgatgtacaaa 31221585  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  31221586 tatcattgctc 31221596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 46844239 - 46844145
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 283  Q
    |||| |||||| |||  ||||||||||||||| ||||| |||||| |||| |||| ||||||||||| |||||||| ||||| |||||| |||||    
T  46844239 ttattttctctcttcttttttctctctccattgtttttaaccaataaaaagagagaaaaacaaagttgtcaccaaagttgtccttaaatagatgt 46844145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 32901419 - 32901504
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || ||||||||||| |||| || |||||||||||||||    
T  32901419 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcaccaaaattatcatcaattggatgtacaaatat 32901504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 36728603 - 36728526
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 283  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||||||| |||||||| ||||||| || |||||||    
T  36728603 ttttctctctccattgttttttaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatcaattggatgt 36728526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 7037482 - 7037370
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | ||  ||| ||||||| ||| || | ||| |||||||  ||| ||||||||||    
T  7037482 ttatcttctctcttcctttttctctctccattgtttttgaccaataagaagggagaaaaacaaggttgtccctaaagttgtcatggaatagatgtacaaa 7037383  T
Q  289 tattattgctctt 301  Q
    ||| |||||||||    
T  7037382 tataattgctctt 7037370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 41495092 - 41495188
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||||||||||| |||| || | ||| |||||||||    
T  41495092 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaaattatcatcaattagatatacaaatat 41495188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 45548791 - 45548671
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||||| |||||| ||||| |||| |||| |||||| ||| ||||  |||||| ||||||||  ||||||| ||  |||| ||| ||||||||| || |    
T  45548791 atgatgtcattatcctctctcttcctttttgtctctctattgttttcaaccaataaaaatagaaaaaaacaaggtcgtcactaaagttgtcattagatag 45548692  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  45548691 atgtacaaatatcattgctct 45548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 302
Target Start/End: Complemental strand, 53384318 - 53384227
Alignment:
Q  210 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 302  Q
    ||||||||||| ||||| |||||| | || |||| |||||||| || |||| ||| || |||| |||||||||||||||||||||||||||||    
T  53384318 ctctctccattgtttttgaccaataagaagagagaaaaacaaa-ttgtcactaaagttatcataaaatggatgtacaaatattattgctcttt 53384227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 3223068 - 3223175
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| || ||||  ||||||||||||||||| ||    
T  3223068 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaagaaggttgtcactaaagttttcatggaatggatgtacaaatatcat 3223167  T
Q  295 tgctcttt 302  Q
    ||||||||    
T  3223168 tgctcttt 3223175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 54165168 - 54165091
Alignment:
Q  180 atgatgttattatcttctctat--tcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||||||| ||||| |  ||| |||||||||| |||| ||||| ||||||||||| ||||||||||||||||    
T  54165168 atgatgttattatcctctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagtt 54165091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 15638220 - 15638305
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| |||||  ||||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  15638220 ttttctctctccattgtttttgtccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 15638305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 5466499 - 5466427
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| ||||||||||| ||||||||| ||||||  ||||||| ||||| ||||||    
T  5466499 atgtttttattttctctattcctttttctctctctattatttttaaccaatagaaatagaagaaaataaagtt 5466427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 20632628 - 20632544
Alignment:
Q  207 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||||||| ||||| ||||||   || |||  |||| |||||| |||||||||||||||| || |||||||||||||||    
T  20632628 tttctctctccattgtttttgaccaataggaagagaaaaaaataaagttgtcaccaaaattgtcatcaattggatgtacaaatat 20632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 31048952 - 31049061
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||| |||||||| ||||| || | ||||||||||||||| ||||| | ||||||||| |||| |||||||||            ||||||||||||||    
T  31048952 atgatattattatcctctctctttctttttctctctccattgtttttgatcaatcaaaagagagaaaaacaaag------------ttgtcattaaatgg 31049039  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  31049040 atgtacaaatatcattgctctt 31049061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 49424812 - 49424708
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||  |||| ||||||| ||||  |||||| ||    
T  49424812 tctctcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagctgtccttaaatgaatgtcaaaatatcat 49424713  T
Q  295 tgctc 299  Q
    |||||    
T  49424712 tgctc 49424708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 55268008 - 55267888
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| |||||||||||||||  |||| |||||| | || |||| ||||||| |||||||| ||| |||| ||  ||| |    
T  55268008 atgatgatcttatcctctctcttcctttttctctctccattgcttttgaccaataagaagagagaaaaacaaggttatcactaaagttgttatggaatag 55267909  T
Q  280 atgtacaaatattattgctct 300  Q
     ||||||||||| ||||||||    
T  55267908 gtgtacaaatatcattgctct 55267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 201 - 252
Target Start/End: Complemental strand, 29407023 - 29406972
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 252  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  29407023 ttcctttttctctctctattattttttaccaatcaaaatagagaaaaccaaa 29406972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 40721971 - 40721900
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaa 251  Q
    |||||||| || || ||||| |||| ||||||||||||||||||||| |||||| |||| |||| |||||||    
T  40721971 atgatgttcttttcctctctcttcctttttctctctccattatttttgaccaataaaaaaagagaaaaacaa 40721900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 42178057 - 42177934
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||| || |||| |||||| |||| |||||| |||| ||||||||| |||||| | || |||| ||||||||||| | |||||| || |||| || ||     
T  42178057 atgatatttttattttctcttttcctttttctatctctattatttttaaccaataagaagagagaaaaacaaagttgttaccaaagttatcatcaattga 42177958  T
Q  280 atgtacaaatattattgctctttt 303  Q
    || ||||||||| | |||||||||    
T  42177957 atatacaaatatcactgctctttt 42177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 45779298 - 45779186
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||  ||||| || | ||||||||||||||| ||||| ||||||||||| ||||  |||            ||||||||||||||||| |    
T  45779298 atgatgttattattctctctctttctttttctctctccattgtttttgaccaatcaaaagagagagaaa------------caaaattgtcattaaatag 45779211  T
Q  280 atgtacaaatattattgctcttttc 304  Q
    |||||||||||| ||||||||||||    
T  45779210 atgtacaaatatcattgctcttttc 45779186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 610896 - 610982
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaag-ttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||||||||||||||||||||| |||| |||  ||||  ||| || |||||||| ||||||||| ||| || |||||||||    
T  610896 ttttctctctccattattttttaccaataaaaagagaaaaaaaataagattgtcaccaaagttgtcattagatgaatatacaaatat 610982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 302
Target Start/End: Complemental strand, 4971992 - 4971898
Alignment:
Q  208 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 302  Q
    |||||| | |||| ||||| ||||||||||| |  | |||||||||||||||  |||||| |||||||||  || ||||||||| ||||||||||    
T  4971992 ttctcttttcattgtttttgaccaatcaaaaaaatgaaaaacaaagttatcattaaaattatcattaaatacatatacaaatatcattgctcttt 4971898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 253
Target Start/End: Original strand, 45923446 - 45923515
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag 253  Q
    ||||||||||  ||||| || | ||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  45923446 atgttattattctctctctttctttttctctctccattatttttgaccaatcaaaa-aaaggaaaacaaag 45923515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 52669616 - 52669498
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||||||| | |||| ||||| || |||||| ||| | |||||| |||| |||| |||||||  || |||| ||| | ||||| ||||||    
T  52669616 atgatggtcttatcttctatcttcctttttccctttccattgtttctgaccaataaaaagagagaaaaacaagattgtcactaaagtggtcataaaatgg 52669517  T
Q  280 atgtacaaatattattgct 298  Q
    |||||||||||| ||||||    
T  52669516 atgtacaaatatcattgct 52669498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 53662420 - 53662330
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||| |||| ||||| || ||| | || |||| |||||||| ||||||| ||| ||||||| ||||||||||||| |||| |||||||    
T  53662420 tctctcttcattgtttttgactaataagaagagagaaaaacaaaattatcactaaagttgtcatgaaatggatgtacatatatcattgctc 53662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 2193790 - 2193705
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| |||||||  || ||| |||| ||||||| || |||||||||||||||    
T  2193790 ttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcatcaaagttgtcatcaattggatgtacaaatat 2193705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 19910889 - 19910994
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||||| || |||| ||  | |||| |||| || |||| ||||| |||| ||||||| ||    
T  19910889 tctctcttcctttttctctctccattatttttgaccaataaaaataaagaaaaataagataatcaacaaagttatcatcaaatgaatgtccaaatatcat 19910988  T
Q  295 tgctct 300  Q
    | ||||    
T  19910989 tactct 19910994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 32365648 - 32365563
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||| || ||||||| |||| || |||| |||| |||||||| ||||    
T  32365648 ttttctctctccattgtttttgaccaataaaaagagagaaaaataatgttatcatcaaagttatcataaaatagatgtacatatat 32365563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 36512932 - 36513028
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 303  Q
    ||||||||||||||| |||||||||||| |||| ||||  |||  ||||| |||| | ||||||| | |||||||| | ||||||| |||||||||||    
T  36512932 ttttctctctccattgttttttaccaataaaaagagagagaaaagaagttgtcacaagaattgtc-tcaaatggattttcaaatatcattgctctttt 36513028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 35580202 - 35580254
Alignment:
Q  208 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 260  Q
    ||||||||||||||||||| |||||| |||| ||||||||| |||||| ||||    
T  35580202 ttctctctccattatttttgaccaatgaaaagagaggaaaaaaaagttgtcac 35580254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 255
Target Start/End: Complemental strand, 45176709 - 45176665
Alignment:
Q  211 tctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||    
T  45176709 tctctccattgtttttgaccaatcaaaagagaggaaaacaaagtt 45176665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 20956589 - 20956514
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||||||  | ||| || | |||||||||| |||| ||||| ||||||||||| |||| |||||||||||    
T  20956589 atgatgttattattctttctctttctttttctctcttcattgtttttgaccaatcaaaagagagaaaaacaaagtt 20956514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 43358703 - 43358766
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    ||||||||||| |||  |||| |||||||||||||||| ||||||||||| |||  ||||||||    
T  43358703 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagttgtcataaaaattgt 43358766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 44170626 - 44170559
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaa 247  Q
    |||||||||||||| ||||| |||| |||||||| || ||| ||||| | ||||||||| ||||||||    
T  44170626 atgatgttattatcctctctcttcctttttctctgtcaattgtttttgatcaatcaaaagagaggaaa 44170559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 9162145 - 9162219
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||||||||    
T  9162145 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgt 9162219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 33484087 - 33483993
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||||||||||| ||||| | |||| | || |||| |||  || ||| |||||||| ||||||| || ||||||||||||||| ||| ||||    
T  33484087 ttttctctctccattgtttttgatcaataagaagagagaaaagtaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcattactct 33483993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 47519701 - 47519607
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||||||||||||||||| || ||| | || | || ||||||| ||| ||| | || || ||||| ||||||||||||||||| | ||||||    
T  47519701 ttttctctctccattatttttaactaataagaagaaagaaaaacaaggttgtcaactaagttatcattcaatggatgtacaaatatcactgctct 47519607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 300
Target Start/End: Complemental strand, 54165092 - 54165058
Alignment:
Q  266 ttgtcattaaatggatgtacaaatattattgctct 300  Q
    |||||||||||||||||||||||||| ||||||||    
T  54165092 ttgtcattaaatggatgtacaaatatcattgctct 54165058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 439294 - 439327
Alignment:
Q  262 aaaattgtcattaaatggatgtacaaatattatt 295  Q
    |||||||||||||||||||||| |||||||||||    
T  439294 aaaattgtcattaaatggatgttcaaatattatt 439327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 1562517 - 1562468
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  1562517 ttttctctctctattatttttgaccaatcaaaaaagagaaaaccaaagtt 1562468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 12694361 - 12694316
Alignment:
Q  254 ttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||||||||||||||||| || ||| ||||||||| |||||||    
T  12694361 ttatcaccaaaattgtcattagatagatatacaaatatcattgctc 12694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 13182426 - 13182515
Alignment:
Q  211 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||||| ||| ||||| |||||| |||| |||| |||||||  |||||| |||| ||||||| || | ||||||||||||| ||| ||||    
T  13182426 tctctctattgtttttaaccaataaaaaaagagaaaaacaagattatcatcaaagttgtcatcaatttgatgtacaaatatcattactct 13182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 13267459 - 13267375
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || |||| ||| |||||||||    
T  13267459 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttttcatcaaagttgt-atgaaatcgatttacaaatat 13267375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 18568796 - 18568711
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||| |||| ||||| |||||| | || | || ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  18568796 ttttctctcttcattgtttttgaccaataagaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 18568711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 20056472 - 20056557
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||| ||| ||||| |||||| | || |||| ||| |||  || |||||||| ||||||| || |||||||||||||||    
T  20056472 ttttctctctcaattgtttttgaccaataagaagagagaaaagcaagattgtcaccaaagttgtcatcaattggatgtacaaatat 20056557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 300
Target Start/End: Original strand, 24154704 - 24154794
Alignment:
Q  208 ttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||||||||| ||||| |||||  |||| |||  |||| | |||| ||| ||||||| ||||||||| |||||||||||||  |||||||    
T  24154704 ttctctctccattgtttttgaccaacaaaaaaaga--aaaatatagttgtcatcaaaattatcattaaatagatgtacaaatatcgttgctct 24154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 36812384 - 36812335
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  36812384 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 36812335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 39844250 - 39844197
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    |||||||||| ||||||||||||||| ||||| |||||| |||| |||| ||||    
T  39844250 tctctattcctttttctctctccattgtttttgaccaataaaaagagagaaaaa 39844197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 39881011 - 39880962
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  39881011 ttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagtt 39880962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 300
Target Start/End: Original strand, 45923517 - 45923550
Alignment:
Q  267 tgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||||||||||||||||||||| ||||||||    
T  45923517 tgtcattaaatggatgtacaaatatcattgctct 45923550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 48743800 - 48743849
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  48743800 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 48743849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 8681020 - 8681116
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||||||||||| ||||| | |||| | || ||   ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  8681020 tctctcttcctttttctctctccattgtttttgatcaataagaagaggaaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 8681116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 12241137 - 12241196
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| |||||||| |||||||||||| |||| |||| ||||||    
T  12241137 tctcttttcctttttctctctctattatttt-taccaatcaaaagagagaaaaataaagtt 12241196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 19245967 - 19246031
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    ||||| |||| |||||||| |||||||||||| ||||||  ||| |||||||||  |||||||||    
T  19245967 tctctcttcctttttctctttccattatttttgaccaatagaaagagaggaaaaggaagttatca 19246031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 29949680 - 29949596
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 264  Q
    |||||||| ||||| ||||| |||| |||||||| || ||| |||||||||||| | || |||| |||| |||||| ||| ||||    
T  29949680 atgatgttcttatcctctctcttcctttttctctatctattgttttttaccaataagaagagagaaaaagaaagttgtcatcaaa 29949596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 30866445 - 30866533
Alignment:
Q  211 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||||| ||||||||| || ||| |||| |||| |||  ||| || |||||||| || ||||||||||||| | ||||||| |||||||    
T  30866445 tctctctattatttttgactaataaaaagagagaaaactaaaattgtcaccaaagttatcattaaatggatatccaaatatcattgctc 30866533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 31413772 - 31413704
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    |||| ||||||||||||||||||||| |||||| |||| |||| | ||||| ||| |||| ||| ||||    
T  31413772 ttcctttttctctctccattatttttgaccaataaaaagagagcacaacaaggttgtcacaaaacttgt 31413704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 33820328 - 33820269
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||| |||| ||||||    
T  33820328 tctcttttcctttttctctctctattattttt-accaatcaaaagagagaaaaataaagtt 33820269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 36792417 - 36792481
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    |||| ||||||||||||||||||||| |||||| |||| ||||  |||  ||||| |||||||||    
T  36792417 ttcctttttctctctccattatttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaa 36792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 38952774 - 38952842
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  || ||||||| ||||||||    
T  38952774 ttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgt 38952842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 40756000 - 40756060
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||||    
T  40756000 tctctcttcctttttctctctctattatttttgaccaatcaaagaagagaaaatcaaagtt 40756060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 41119506 - 41119458
Alignment:
Q  207 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||||||| ||||| |||||| |||| ||||||||| ||||||    
T  41119506 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagtt 41119458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 46173615 - 46173659
Alignment:
Q  194 ttctctattcccttttctctctccattattttttaccaatcaaaa 238  Q
    |||||| |||| ||||||||||||||| |||||||||||| ||||    
T  46173615 ttctctcttcctttttctctctccattgttttttaccaatgaaaa 46173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 9498 - 9619
Alignment:
Q  184 tgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 283  Q
    |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  9498 tgttattatcctctctcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgt 9597  T
Q  284 acaaatattattgctcttttca 305  Q
    |||||||| ||||||| |||||    
T  9598 acaaatatcattgctcatttca 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 6e-41; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 15364727 - 15364848
Alignment:
Q  184 tgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 283  Q
    |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  15364727 tgttattatcctctctcttcctttttctctctccattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatggatgt 15364826  T
Q  284 acaaatattattgctcttttca 305  Q
    |||||||| ||||||| |||||    
T  15364827 acaaatatcattgctcatttca 15364848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 15328553 - 15328678
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||| | |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  15328553 atgatgttattatcctctttcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatgg 15328652  T
Q  280 atgtacaaatattattgctcttttca 305  Q
    |||||||||||| ||||||| |||||    
T  15328653 atgtacaaatatcattgctcatttca 15328678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 25924871 - 25924750
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||   |||| |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| |||||||| |||||||||||||     
T  25924871 atgatgttattattcgctctcttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaatga 25924772  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  25924771 atgtacaaatatcattgctctt 25924750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 32784802 - 32784923
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| |||||| |||||||||||||| || |||||||| |||| |||||||| || |||||||||||||||||||||      
T  32784802 atgatgttattatcctctctcttcctttttctttctccattatttttgactaatcaaaagagagaaaaacaaaattgtcaccaaaattgtcattaaataa 32784901  T
Q  280 atgtacaaatattattgctctt 301  Q
    ||||| |||||| |||||||||    
T  32784902 atgtagaaatatcattgctctt 32784923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 34413155 - 34413276
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||  ||||| |||| ||||||||| ||||| ||||| ||||||||||| |||  ||| ||||||| ||||||||||||||||||||| |    
T  34413155 atgatgttgttattctctctcttcctttttctctccccattgtttttgaccaatcaaaagagaaaaaatcaaagttgtcaccaaaattgtcattaaattg 34413254  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  34413255 atgtacaaatatcattgctctt 34413276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 28965847 - 28965731
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||| ||||||| |||||| |||  |||||||||| |||| ||||| ||||||||||| ||||  ||||||||||||||||||| ||||||||||||||    
T  28965847 atgatattattatattctctcttcttttttctctcttcattgtttttgaccaatcaaaagagagagaaacaaagttatcaccaaagttgtcattaaatgg 28965748  T
Q  280 atgtacaaatattattg 296  Q
    ||||||| |||| ||||    
T  28965747 atgtacatatatcattg 28965731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 237405 - 237286
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| |||||  ||| ||||||||||||||||||||| |||||| | || |||| ||||||||| | |||| ||| |||||||||||| |    
T  237405 atgatgttcttatcgtctctcatcctttttctctctccattatttttgaccaataagaagagagaaaaacaaagatgtcacaaaagttgtcattaaatag 237306  T
Q  280 atgtacaaatattattgctc 299  Q
    |||| ||||||| |||||||    
T  237305 atgtccaaatatcattgctc 237286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 2881426 - 2881517
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||||||| ||||||||| |||||| | || ||||  |||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||    
T  2881426 tctctctctattatttttgaccaataagaagagagagaaacaaagttgtcaccaaagttgtcattaaatggatgtccaaatatcattgctct 2881517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 290
Target Start/End: Original strand, 6435109 - 6435210
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||||||||| || | |||||||| |||||| ||||| |||||| | || |||| ||||||| ||| |||||||||||||||| || ||||||||||||    
T  6435109 ttatcttctctcttactttttctctatccattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaa 6435208  T
Q  289 ta 290  Q
    ||    
T  6435209 ta 6435210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 3660360 - 3660244
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||||||||| |||  |||||||||| |||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||||||  |||||    
T  3660360 atgatggtcttatcttctctcttcttttttctctctgcattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 3660261  T
Q  280 atgtacaaatattattg 296  Q
    |||||||||||| ||||    
T  3660260 atgtacaaatatcattg 3660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 298
Target Start/End: Complemental strand, 3339485 - 3339388
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 298  Q
    |||| ||||||||||| ||| ||||| |||||| |||| |||| |||||||  || |||| ||| ||||||| |||||||||||||||||| ||||||    
T  3339485 ttcctttttctctctctattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaagttgtcatgaaatggatgtacaaatatcattgct 3339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 297
Target Start/End: Original strand, 2862165 - 2862253
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgc 297  Q
    |||||||| ||||||||| |||||| | || ||||  ||||||| || |||||||| |||||||||||||||||| ||||||| |||||    
T  2862165 tctctctctattatttttgaccaataagaaaagagagaaacaaaattgtcaccaaagttgtcattaaatggatgtccaaatatcattgc 2862253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 1803962 - 1804057
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttttc 304  Q
    |||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || ||||||||||||||| | | ||||||||    
T  1803962 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttttc 1804057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 27334957 - 27335039
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||| ||||||||| |||||| |||| |||| ||||||| ||| |||  ||| ||||||| ||||||||||||||||||    
T  27334957 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatat 27335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 27395697 - 27395779
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||| ||||||||| |||||| |||| |||| ||||||| ||| |||  ||| ||||||| ||||||||||||||||||    
T  27395697 tctctctctattatttttgaccaataaaaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaatat 27395779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 26668563 - 26668635
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| ||||| |||| |||||||| |  ||||||||| | ||||||||| ||||||||||||||||    
T  26668563 atgttattatcctctctcttcctttttctctttttattatttttgatcaatcaaaagagaggaaaacaaagtt 26668635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 2056847 - 2056970
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||  |||||||| |||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||||||  ||||     
T  2056847 atgatggtcttatcctctctcttcttttttctctatccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaatga 2056946  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| |||||||||||    
T  2056947 atgtacaaatatcattgctctttt 2056970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 12441600 - 12441702
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||||||||| || | ||||||||||||||| ||||| ||| || | || |||| ||| ||| ||| |||||||| ||||||| || | ||||||||||    
T  12441600 ttatcttctctcttactttttctctctccattgtttttaaccgataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattagatgtacaaa 12441699  T
Q  289 tat 291  Q
    |||    
T  12441700 tat 12441702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 17902699 - 17902581
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||  |||| |||||||||| ||||| |||||| | || |||| |||||||  ||||||| ||| |||||||  ||| |    
T  17902699 atgatggtcttatcctctctcttcttttttatctctccattgtttttgaccaataagaagagagaaaaacaatattatcactaaagttgtcatggaatag 17902600  T
Q  280 atgtacaaatattattgct 298  Q
    |||||||||||| ||||||    
T  17902599 atgtacaaatatcattgct 17902581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 300
Target Start/End: Original strand, 11017461 - 11017566
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||| ||  ||||||||||||||||| |     
T  11017461 tctcttttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgttatggaatggatgtacaaatatcac 11017560  T
Q  295 tgctct 300  Q
    ||||||    
T  11017561 tgctct 11017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 31368615 - 31368501
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatt---aaa 276  Q
    |||||||||||||| | ||| |||  |||||||| || ||| |||||||||||| ||||       |||||||||| |||||||| ||||||||   |||    
T  31368615 atgatgttattatcctatctcttcatttttctctatctattgttttttaccaataaaaa-------aaacaaagttgtcaccaaagttgtcattcataaa 31368523  T
Q  277 tggatgtacaaatattattgct 298  Q
    ||||||||||||||| ||||||    
T  31368522 tggatgtacaaatatcattgct 31368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 17835697 - 17835777
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggat 281  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||  ||| ||||| ||||||||||    
T  17835697 ttcctttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcattaaagttgtccttaaatggat 17835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 21210346 - 21210442
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 302  Q
    ||||||||||||||| ||||| | |||| | || |||| ||||||| ||| ||| | || |||||||| | |||||||| |||||| ||||||||||    
T  21210346 ttttctctctccattgtttttaatcaataagaagagagaaaaacaaggttgtcaactaagttgtcattcactggatgtataaatatcattgctcttt 21210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 2886694 - 2886737
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaa 238  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||    
T  2886694 tctctattcctttttctctctccattgttttttaccaatgaaaa 2886737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 9954627 - 9954737
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa-ttgtcattaaatggatgtacaaatatta 293  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| || |  ||||| ||||||||| |||| ||||||||| ||| ||||||| |    
T  9954627 tctctcttccgttttctctctccattgtttttaaccaatgaaaagagagaaagaagaagttgtcaccaaaagttgt-attaaatggttgttcaaatatca 9954725  T
Q  294 ttgctcttttca 305  Q
     | |||||||||    
T  9954726 ctcctcttttca 9954737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 11635707 - 11635783
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 284  Q
    ||||||||||||||||||||| |||||| |||| | |  |||||| |||| ||| |||||||||| | |||||||||||    
T  11635707 ttttctctctccattatttttgaccaataaaaaaaaa--aaaacagagttgtcatcaaaattgtcttcaaatggatgta 11635783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 296
Target Start/End: Complemental strand, 29376697 - 29376607
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 296  Q
    |||||| |||||||| ||| | |||||| | || |||| ||||||  ||| ||| ||||||||||| ||||| ||||||||||||| ||||    
T  29376697 ttttctttctccattgtttataaccaataagaagagagcaaaacatggttgtcatcaaaattgtcactaaatagatgtacaaatatcattg 29376607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 1688354 - 1688269
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||| |||||||||  ||||| |||  | ||||||||  |||||| ||| |||||||    
T  1688354 ttttctctctccattgtttttaaccaataaaaagagaggaaaaagaagttgtcaagataattgtcaaaaaatggttgttcaaatat 1688269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 2689086 - 2689127
Alignment:
Q  250 aaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  2689086 aaagttgtcacaaaaattgtcattaaatggatgttcaaatat 2689127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 4923036 - 4923108
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 278  Q
    ||||||||||| ||||||||| |||||| | || |||| |||||||| ||||||  ||| ||||||| |||||    
T  4923036 ttttctctctcaattatttttaaccaataagaagagagaaaaacaaaattatcataaaagttgtcatcaaatg 4923108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 16533252 - 16533204
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  16533252 tctctcttcctttttctctctccattgttttttaccaatgaaaagagag 16533204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 24437529 - 24437592
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    |||| ||||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||| |||||    
T  24437529 ttcctttttctctctccattgtttttaaccaataaaaaaagaggaaaa-aaagttgtcatcaaaa 24437592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 9e-40; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 40478294 - 40478175
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  40478294 atgatgttattatcctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaaattgtcattaaatgg 40478195  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  40478194 atgtacaaatatcattgctc 40478175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 41877752 - 41877871
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||||||||||| |||||||| ||||||||||||||    
T  41877752 atgatgttattatcctctctcttcctttttctctctccattgtttttgaccaatcaaaaaagagaaaaacaaagttgtcaccaaagttgtcattaaatgg 41877851  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  41877852 atgtacaaatatcattgctc 41877871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 45295746 - 45295624
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||||||||||| ||||||||  |||||||||||||    
T  45295746 atgatgttattatcctctctcttcctttttctctctacattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagctgtcattaaatgg 45295647  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||||||||||    
T  45295646 atgtacaaatatcattgctcttt 45295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 25542975 - 25542867
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 282  Q
    ||||||||||| ||||| |||| |||||||||| |||| ||||| ||||||||||| |||||||| ||||||| |||| ||| || ||||||||||||||    
T  25542975 atgttattatcctctctcttcctttttctctcttcattgtttttgaccaatcaaaagagaggaaaccaaagttgtcactaaagttatcattaaatggatg 25542876  T
Q  283 tacaaatat 291  Q
    |||||||||    
T  25542875 tacaaatat 25542867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 31007359 - 31007233
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt---atcaccaaaattgtcattaaa 276  Q
    |||||||||||||| ||||| |||| |||||||| | |||| ||||| ||||||||||| ||||||||||||||||   | ||||||| || ||||||||    
T  31007359 atgatgttattatcctctctcttcctttttctcttttcattgtttttaaccaatcaaaagagaggaaaacaaagttgtcaccaccaaagttatcattaaa 31007260  T
Q  277 tggatgtacaaatattattgctctttt 303  Q
    || |||||||||||| |||||||||||    
T  31007259 tgaatgtacaaatatgattgctctttt 31007233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 298
Target Start/End: Original strand, 42718185 - 42718301
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||||||||||| |||||| |||  |||||||||| |||| ||||| ||||||||||| ||||  |||||||||| ||||||||||||||||||||||     
T  42718185 atgatgttattatattctcttttcttttttctctcttcattgtttttgaccaatcaaaagagag--aaacaaagttgtcaccaaaattgtcattaaatga 42718282  T
Q  280 atgtacaaatattattgct 298  Q
    ||||||| |||| ||||||    
T  42718283 atgtacatatatcattgct 42718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 300
Target Start/End: Original strand, 14992134 - 14992259
Alignment:
Q  177 cagatgatgttattatcttctctattcccttttctctctcc--attattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta 274  Q
    ||||||||||||||||| ||||| |||| | |||||||||   ||| | ||| ||||||||||| |||  ||||||||||| |||||||| |||||||||    
T  14992134 cagatgatgttattatcctctcttttccttgttctctctctttattgtgtttgaccaatcaaaaaagaataaaacaaagttgtcaccaaagttgtcatta 14992233  T
Q  275 aatggatgtacaaatattattgctct 300  Q
    ||||||||||||||||| ||| ||||    
T  14992234 aatggatgtacaaatatcatttctct 14992259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 25142692 - 25142782
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 270  Q
    |||||||||||||| ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||||||||| ||||||||| |||||    
T  25142692 atgatgttattatcctctctcttcctttttctctctccattgtttttgaccaattaaaagagaggaaaacaaagtaatcaccaaagttgtc 25142782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 52454099 - 52453980
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || ||||  |||||||||| |||| ||| ||||||| ||||||    
T  52454099 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagagaaacaaagttgtcactaaagttgtcatgaaatgg 52454000  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  52453999 atgtacaaatatcattgctc 52453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 34021470 - 34021348
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || |||| ||||||||||| |||| ||| |||||||  |||||    
T  34021470 atgatggtcttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcatggaatgg 34021371  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||||||||||    
T  34021370 atgtacaaatatcattgctcttt 34021348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 35756053 - 35756163
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||||||| ||||||| |||| ||||||||||    
T  35756053 ttatcatctctcttcatttttctctctccattgtttttaaccaataagaagagagaaaaacaaagttgtcaccaaagttgtcatgaaatagatgtacaaa 35756152  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  35756153 tatgattgctc 35756163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 11327172 - 11327297
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || ||||  |||||| ||| |||| ||| ||||||| ||||||    
T  11327172 atgatggtcttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatgg 11327271  T
Q  280 atgtacaaatattattgctcttttca 305  Q
    |||||||||||| |||||||||||||    
T  11327272 atgtacaaatatcattgctcttttca 11327297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 13159725 - 13159845
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  13159725 atgatggtcttatcgtctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 13159824  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  13159825 atgtacaaatatcattgctct 13159845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 206 - 301
Target Start/End: Original strand, 43900862 - 43900957
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    ||||||||||||||||||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||||||||  |||||| |||||||||    
T  43900862 ttttctctctccattatttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcattgctctt 43900957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 50879659 - 50879782
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||||||||| |||| ||||||||||||||| | ||| |||||| | || |||| | ||||||||| |||| ||| |||||||  |||||    
T  50879659 atgatggtcttatcttctctcttcctttttctctctccattgtgtttgaccaataagaagagagaacaacaaagttgtcactaaagttgtcatggaatgg 50879758  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| ||| |||||||    
T  50879759 atgtacaaatatcatttctctttt 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 50280085 - 50279971
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||  ||| ||||||| |||||||||||||||    
T  50280085 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcattaaagttgtcatgaaatggatgtacaaa 50279986  T
Q  289 tattattgctctttt 303  Q
    ||| |||||||||||    
T  50279985 tatcattgctctttt 50279971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 28263609 - 28263730
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || | || |||| |||||| |||| ||| ||||||| ||||||    
T  28263609 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagaaagaaaaataaagttgtcactaaagttgtcatgaaatgg 28263708  T
Q  280 atgtacaaatattattgctctt 301  Q
    ||| |||||||| |||||||||    
T  28263709 atgaacaaatatcattgctctt 28263730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 30400154 - 30400041
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||||||||||||    
T  30400154 ttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatggatgtacaaa 30400055  T
Q  289 tattattgctcttt 302  Q
    ||| ||||||||||    
T  30400054 tataattgctcttt 30400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 54233482 - 54233397
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  54233482 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 54233397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 8254091 - 8254211
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| |||||  || || | || ||||  ||| || ||| |||| ||||||||||| ||||||    
T  8254091 atgatggtcttatcatctctcttcctttttctctctccattgtttttagccgataagaagagagagaaataatgttgtcactaaaattgtcatgaaatgg 8254190  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  8254191 atgtacaaatatcattgctct 8254211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 301
Target Start/End: Original strand, 36819029 - 36819141
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||    
T  36819029 ttatcctctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaa 36819128  T
Q  289 tattattgctctt 301  Q
    ||| |||| ||||    
T  36819129 tatcattgttctt 36819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 23163152 - 23163029
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| |||||||||| |||| ||||| |||||| | || |||| |||||||| || |||| |||||||||||  ||| |    
T  23163152 atgatggtcttatcctctctcttcctttttctctcttcattctttttgaccaataagaaaagagaaaaacaaaattgtcactaaaattgtcatggaattg 23163053  T
Q  280 atgtacaaatattattgctctttt 303  Q
    ||||  |||||| |||||||||||    
T  23163052 atgtctaaatatcattgctctttt 23163029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 2009744 - 2009829
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatatt 292  Q
    ||||||||||||||||||||| |||||| | || |||| ||| ||| ||| |||||||| |||||| ||||| ||||||||||||||    
T  2009744 ttttctctctccattatttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtca-taaattgatgtacaaatatt 2009829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 23906968 - 23906883
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  23906968 ttttctctctccattgtttttgaccaataagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 23906883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 298
Target Start/End: Original strand, 44855312 - 44855433
Alignment:
Q  177 cagatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaa 276  Q
    |||| |||||| ||||| | ||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| ||  || |||| ||| ||||||| |||    
T  44855312 cagacgatgttcttatcatttctcttcctttttctctctccattttttttaaccaataagaagagagaaaaataagattgtcactaaagttgtcatgaaa 44855411  T
Q  277 tggatgtacaaatattattgct 298  Q
    | ||||||||||||| ||||||    
T  44855412 ttgatgtacaaatatcattgct 44855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 51717531 - 51717616
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||| ||||||||||||||||||||||  | || |||| ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  51717531 ttttttctctccattattttttaccaacaagaagagagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 51717616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 20714307 - 20714423
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || | || |||| || ||| |||| |||||| ||||  |||||    
T  20714307 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagatagaaaaataaggttgtcactaaaattatcatggaatgg 20714406  T
Q  280 atgtacaaatattattg 296  Q
    |||||||||||| ||||    
T  20714407 atgtacaaatatcattg 20714423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 46344478 - 46344598
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| |||||| |||||||||||||| |||||| | || | || |||| || ||| |||| ||| ||||| | |||||     
T  46344478 atgatggtcttatcctctctcttcctttttctttctccattatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatga 46344577  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  46344578 atgtacaaatatcattgctct 46344598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 53102894 - 53102786
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| |||| |||||||||| ||||| | |||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| ||    
T  53102894 tctctcttcctttttttctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcat 53102795  T
Q  295 tgctctttt 303  Q
    ||| |||||    
T  53102794 tgccctttt 53102786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 3958025 - 3957906
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || | || ||||||| ||| |||| ||| ||||| |  |||||    
T  3958025 atgatggtcttatcctctctcttcctttttctctctccattgtttttgacaaataagaagatagaaaaacaaggttgtcactaaagttgtcctggaatgg 3957926  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  3957925 atgtacaaatatcattgctc 3957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 43441760 - 43441845
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||||||||| |||||| |||| |||| |||  || ||| ||  |||| ||||||| || |||||||||||||||    
T  43441760 ttttctctctccattatttttgaccaataaaaaaagagaaaagtaaggttgtcgtcaaagttgtcatcaattggatgtacaaatat 43441845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 50652458 - 50652563
Alignment:
Q  186 ttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtac 285  Q
    |||||||| ||||| |||| ||| ||||||||||| ||||| |||||| | || |||| ||| |||| || ||| |||||||||||| || |  ||||||    
T  50652458 ttattatcctctctcttccttttactctctccattgtttttgaccaataagaagagagaaaagcaaaattgtcatcaaaattgtcatcaattaaatgtac 50652557  T
Q  286 aaatat 291  Q
    ||||||    
T  50652558 aaatat 50652563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 3069582 - 3069462
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| || |||||||||||| ||||| |||||| | || |||| |||||||  ||  ||| ||| |||||||  |||||    
T  3069582 atgatggtcttatcctctctcttcctttatctctctccattgtttttgaccaataagaagagagaaaaacaagattcccactaaagttgtcatggaatgg 3069483  T
Q  280 atgtacaaatattattgctct 300  Q
    |||| ||||||| ||||||||    
T  3069482 atgtgcaaatatcattgctct 3069462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 298
Target Start/End: Complemental strand, 7039174 - 7039123
Alignment:
Q  247 aacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 298  Q
    ||||| |||||||| ||||||||||| ||||||| |||||||||| ||||||    
T  7039174 aacaaggttatcactaaaattgtcatgaaatggaagtacaaatatcattgct 7039123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 32687941 - 32687882
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||  |||||||||||||||    
T  32687941 ttttctctctccattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaa 32687882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 296
Target Start/End: Complemental strand, 32931896 - 32931809
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 296  Q
    |||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||  | |||||||||||||||||| ||||    
T  32931896 tctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatcattg 32931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 37303072 - 37303013
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  37303072 ttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 37303013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 291
Target Start/End: Complemental strand, 47056524 - 47056421
Alignment:
Q  189 ttatcttctctattcccttttctctctccattatttttt-accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaa 287  Q
    ||||||||||| |||| ||||||||||| |||  ||||| ||||||  ||| |||| |||  || ||| ||| |||||||||||| || |||||||||||    
T  47056524 ttatcttctctcttcctttttctctctcaattggtttttgaccaatagaaagagagaaaagtaaggttgtcatcaaaattgtcatcaactggatgtacaa 47056425  T
Q  288 atat 291  Q
    ||||    
T  47056424 atat 47056421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 47484369 - 47484432
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    ||||||||||||||| ||||| |||||| |||| |||| | |||||||||||| | ||||||||    
T  47484369 ttttctctctccattgtttttgaccaatgaaaagagagcacaacaaagttatcccaaaaattgt 47484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 3483209 - 3483263
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 260  Q
    ||||||||||||||||||||||| |||| |||| |||| |||| |||||| ||||    
T  3483209 ttttctctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtcac 3483263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 7949873 - 7949927
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||| ||||||||||||||| ||||| ||||||||||| |||| |||| ||||||    
T  7949873 ttcctttttctctctccattttttttaaccaatcaaaagagagaaaaataaagtt 7949927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 9027963 - 9028047
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||||||||  |||| ||||| |||| ||||| || || |||||| ||| |||||||    
T  9027963 ttttctctctccattgtttttgaccaataaaaatagagagaaacgaagttgtcacaaaaatcgt-atcaaatggttgttcaaatat 9028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 26279963 - 26280016
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||||||||    
T  26279963 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagaggaaaa 26280016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 296
Target Start/End: Complemental strand, 27162459 - 27162358
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||| | || |||  |||||| |||  ||| |||||| |||||| ||||| |||||| ||    
T  27162459 tctctcttcctttttttctctccattatttttaaccaataaaaagatagaaaagtaaagttgtcaataaagttgtcaataaatgaatgtagaaatatcat 27162360  T
Q  295 tg 296  Q
    ||    
T  27162359 tg 27162358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 32457747 - 32457694
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  32457747 tctctcttcctttttctctctccattatttttaaccaatgaaaagagagaaaaa 32457694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 38957499 - 38957402
Alignment:
Q  204 ccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||||||| |||||||||||||| |||||| |||| |||  |||| |   ||||| | ||| || ||||||||| ||| ||||||||| |||||||||    
T  38957499 ccttttctttctccattatttttgaccaataaaaagagaaaaaaatatgattatcgctaaagttatcattaaatagatatacaaatatcattgctctt 38957402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 1208025 - 1208120
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||| ||||||| |||||||  ||| | || |||| ||| ||||||| |||||||| ||| ||| || |||||||||||||||    
T  1208025 tctcttttcctttttctc-ctccattgttttttattaataagaagagagaaaatcaaagttgtcaccaaagttgacatcaattggatgtacaaatat 1208120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 1765483 - 1765515
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaa 238  Q
    |||||||||||||||||||||||||||| ||||    
T  1765483 ttttctctctccattattttttaccaatgaaaa 1765515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 11173529 - 11173636
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| |||||||||  |||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||| || |||||| ||| ||||||||||    
T  11173529 tctctcttcctttttctctcaacattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatggttgttcaaatattat 11173627  T
Q  295 tgctctttt 303  Q
    | |||||||    
T  11173628 tactctttt 11173636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 20080122 - 20080082
Alignment:
Q  250 aaagttatcaccaaaattgtcattaaatggatgtacaaata 290  Q
    |||||| |||| |||||||||||||||||||||| ||||||    
T  20080122 aaagttgtcacaaaaattgtcattaaatggatgttcaaata 20080082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 21960568 - 21960608
Alignment:
Q  396 ctggtggtattggcctgggacctgagtctgtgctcctcctc 436  Q
    |||||||||||||| |||||||||||  |||||||||||||    
T  21960568 ctggtggtattggcttgggacctgagagtgtgctcctcctc 21960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 23183686 - 23183606
Alignment:
Q  220 tattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||| |||||| ||| ||||| ||   ||| || |||||||| || ||||||||||||||||||||||| ||| ||||    
T  23183686 tatttttgaccaataaaactagagaaatttaaaattgtcaccaaagttatcattaaatggatgtacaaatatcatttctct 23183606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 33007439 - 33007515
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaaca-aagttatcaccaaaattgtc 270  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| | ||||| |||| |||||||||    
T  33007439 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtc 33007515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 42864246 - 42864202
Alignment:
Q  257 tcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||||||| ||||||||| || ||||||||||||| |||||||||    
T  42864246 tcaccaaagttgtcattagatagatgtacaaatatcattgctctt 42864202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 49130933 - 49131028
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||||||||||| ||||| || ||| |||| ||||  |||  ||||| |||| ||||||||| | |||||||||| |||||||    
T  49130933 tctctcttcctttttctctctccattgtttttgactaatgaaaagagagagaaaagaagttgtcacaaaaattgtc-tcaaatggatgttcaaatat 49131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 52678557 - 52678521
Alignment:
Q  223 tttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    |||| |||||||||||||||| |||||||||||||||    
T  52678557 ttttaaccaatcaaaatagagaaaaacaaagttatca 52678521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 299
Target Start/End: Complemental strand, 7077347 - 7077227
Alignment:
Q  179 gatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 278  Q
    ||||||||| ||||| || || |||| ||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||| |||||||||||||    
T  7077347 gatgatgttgttatcctcactcttcctttttctctctccattatttttgaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatg 7077248  T
Q  279 gatgtacaaatattattgctc 299  Q
    ||||||||||||| |||||||    
T  7077247 gatgtacaaatatcattgctc 7077227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 30574384 - 30574261
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  |||||    
T  30574384 atgatggtcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatgg 30574285  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| |||||||||||    
T  30574284 atgtacaaatatcattgctctttt 30574261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 36548387 - 36548265
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| ||||||| ||||| |||| ||||||||||||||| ||||  | |||| ||||||||| ||||||| ||| ||| |||| ||||||||| ||||    
T  36548387 atgatgctattatcctctctcttcctttttctctctccattgttttcaatcaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatgg 36548288  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||||||||||    
T  36548287 atgtacaaatatcattgctcttt 36548265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 19271923 - 19272044
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| | ||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||||||| |||||||||||  ||| |    
T  19271923 atgatgttcttatcctttctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcactaaaattgtcatataatag 19272022  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  19272023 atgtacaaatatcattgctctt 19272044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 26685755 - 26685874
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||||||||| |||| |||||||| | |||| ||||| | | ||||||| ||||||||||||| || | |||||| || ||||||||| |    
T  26685755 atgatgttattatcttctctcttcctttttctcttttcattgtttttaatcgatcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatag 26685854  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  26685855 atgtacaaatatcattgctc 26685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 26955486 - 26955605
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||||||||| |||| |||||||| | |||| ||||| | | ||||||| ||||||||||||| || | |||||| || ||||||||| |    
T  26955486 atgatgttattatcttctctcttcctttttctcttttcattgtttttaatcgatcaaaagagaggaaaacaaaattgtgaccaaagttatcattaaatag 26955585  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  26955586 atgtacaaatatcattgctc 26955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 12512857 - 12512981
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  |||||    
T  12512857 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgg 12512956  T
Q  280 atgtacaaatattattgctcttttc 304  Q
    |||||||||||| ||||||||||||    
T  12512957 atgtacaaatatcattgctcttttc 12512981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 32634772 - 32634888
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||  ||||||||||||| | |||||||||||| | || |||| |||||||| ||||||| |||||||||||  |||||    
T  32634772 atgatggtcttatcctctcttttcatttttctctctccaatgttttttaccaataagaaaagagaaaaacaaaattatcactaaaattgtcatggaatgg 32634871  T
Q  280 atgtacaaatattattg 296  Q
    |||||||||||| ||||    
T  32634872 atgtacaaatatcattg 32634888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 3263515 - 3263396
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  3263515 atgatggtcttatcctctctctttctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 3263416  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  3263415 atgtacaaatatcattgctc 3263396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 15622108 - 15622227
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  15622108 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 15622207  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  15622208 atgtacaaatatcattgctc 15622227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 38010936 - 38011059
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||  |||||||| || |||| |||||||||||  ||| |    
T  38010936 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagaaaaaaacaaaattgtcactaaaattgtcatggaatag 38011035  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| |||||||||||    
T  38011036 atgtacaaatatcattgctctttt 38011059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 11464121 - 11464008
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| |||| ||| |||| ||  ||||||||||||||    
T  11464121 ttatcatctctcttcatttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgttatggaatggatgtacaaa 11464022  T
Q  289 tattattgctcttt 302  Q
    ||| ||||||||||    
T  11464021 tatcattgctcttt 11464008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 12417690 - 12417811
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||| |||||  ||||||||||||||| ||||| |||||  | || |||| || |||||||| |||||||| ||||| | |||| |    
T  12417690 atgatgttgttatcctctgtattcatttttctctctccattgtttttaaccaaaaagaagagagaaacacaaagttgtcaccaaagttgtcgtgaaatag 12417789  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  12417790 atgtacaaatatcattgctctt 12417811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 31006123 - 31006196
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||||||| ||||| |||| ||||||||   |||||||||| ||||||||||||||||||||||||||||    
T  31006123 atgatgttattatcctctctcttcctttttctctt--cattatttttgaccaatcaaaatagaggaaaacaaagtt 31006196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 206 - 301
Target Start/End: Original strand, 30776709 - 30776804
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||| ||||||||||||||||||||||| |||| ||||  ||||||| || |||| ||| ||||||| ||||  |||||||||||| |||||||||    
T  30776709 ttttttctctccattattttttaccaataaaaagagagagaaacaaatttgtcactaaatttgtcatgaaataaatgtacaaatatcattgctctt 30776804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 35972638 - 35972756
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||  ||||| || | ||||||||||||||||||||| | |||| |||| |||| |||| || ||| ||||||||||| ||| ||||| |    
T  35972638 atgatgttattat--tctctcttgctttttctctctccattattttt-atcaataaaaagagag-aaaataaggttgtcaccaaaattatcaataaattg 35972733  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||||||||||    
T  35972734 atgtacaaatatgattgctcttt 35972756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 4292873 - 4292967
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||||||||||| || ||||| |||||| | ||||||| ||||||||||| ||| |||||||||||| ||||| |||| ||||||| ||| ||||    
T  4292873 ttttctctctccgttgtttttgaccaataagaatagagaaaaacaaagttgtcaacaaaattgtcatcaaatgaatgtccaaatatcattactct 4292967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 302
Target Start/End: Complemental strand, 3154641 - 3154528
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  ||||||||||||||| ||||| || ||| |||| |||| |||| |||||| |||||||||||||||| || |  |||||||||    
T  3154641 ttatcatctctcttcatttttctctctccattttttttaactaataaaaagagagaaaaataaagttgtcaccaaaattgtcatcaattaaatgtacaaa 3154542  T
Q  289 tattattgctcttt 302  Q
    ||| ||| ||||||    
T  3154541 tatcattactcttt 3154528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 8959250 - 8959335
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||| |||| ||||||| ||| || ||||| ||||||| || |||||||||||||||    
T  8959250 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatat 8959335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 9594542 - 9594667
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  ||| || ||| |||| ||| |||||||  |||||    
T  9594542 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaataaggttgtcactaaagttgtcatggaatgg 9594641  T
Q  280 atgtacaaatattattgctcttttca 305  Q
    |||||||||||| |||||||||||||    
T  9594642 atgtacaaatatcattgctcttttca 9594667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 28501681 - 28501777
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaa 276  Q
    |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||| ||||    
T  28501681 atgatgttcttatcatctctcttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcactaaa 28501777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 33823701 - 33823585
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  33823701 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 33823602  T
Q  280 atgtacaaatattattg 296  Q
    |||||||||||| ||||    
T  33823601 atgtacaaatatcattg 33823585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 9596821 - 9596702
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| ||| |||||||  ||||     
T  9596821 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatga 9596722  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  9596721 atgtacaaatatcattgctc 9596702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 41192651 - 41192726
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||| ||||| || || |||| ||||||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  41192651 atgatgttgttatcctcactcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaagtt 41192726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 22920499 - 22920377
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| | | |||||||  ||| |    
T  22920499 atgatgttcttatcatctctcttcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactatagttgtcatgtaatag 22920400  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| || |||||||    
T  22920399 atgtacaaatatcatcgctcttt 22920377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 17489438 - 17489523
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||||||| ||||||| || |||||||||||||||    
T  17489438 ttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatat 17489523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 4954530 - 4954649
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| ||| || | || |||| ||||||| ||| |||| ||| |||| ||  |||||    
T  4954530 atgatggtcttatcctctctcttcctttttctctctccattgtttttgacccataagaagagagaaaaacaaggttgtcactaaagttgttatagaatgg 4954629  T
Q  280 atgtacaaatattattgctc 299  Q
    ||||| |||||| |||||||    
T  4954630 atgtagaaatatcattgctc 4954649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 10522848 - 10522958
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| || | ||  |||| || ||||||    
T  10522848 ttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttattatggaatgaatatacaaa 10522947  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  10522948 tatcattgctc 10522958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 34381091 - 34381163
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaatt 267  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||| ||||| |||| ||||||    
T  34381091 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaatt 34381163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 12401282 - 12401365
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaat 289  Q
    |||||| |||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| ||||||| ||||||||||||||||    
T  12401282 ttttctgtctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatgaaatggatgtacaaat 12401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 25345402 - 25345521
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||  ||| ||||| |||||| | || |||| |||| ||  || |||| |||||||| ||  |||||    
T  25345402 atgatggtcttatcatctctcttcctttttctctctttattgtttttgaccaataagaagagagaaaaataagattgtcactaaaattgttatggaatgg 25345501  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  25345502 atgtacaaatatcattgctc 25345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 10232578 - 10232648
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||| |||| ||||  ||||| |||||||||    
T  10232578 tctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaa 10232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 12661939 - 12661869
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| |||||||||||||||| |||| |||||| |||| |||| ||||  ||||| |||||||||    
T  12661939 tctctcttcctttttctctctccattaattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaa 12661869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 304
Target Start/End: Original strand, 34888846 - 34888884
Alignment:
Q  266 ttgtcattaaatggatgtacaaatattattgctcttttc 304  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  34888846 ttgtcattaaatggatgttcaaatattatttctcttttc 34888884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 372701 - 372616
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||| |||| ||||| || ||| |||| | || ||| ||| ||| ||||||||||| |||| || |||||||||||||||    
T  372701 ttttctctcttcattgtttttgactaataaaaagatagaaaagcaaggttgtcaccaaaattatcatcaattggatgtacaaatat 372616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 14914460 - 14914544
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||  ||||||||||| ||| |||| || | || ||||||||||||||||||    
T  14914460 ttttctctctccattgtttttgaccaataagaagagataaaaacaaagttgtcatcaaagttat-atgaaatggatgtacaaatat 14914544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 20719996 - 20719912
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||||||||| |||||| |||| ||||  |||  ||||| |||| ||| ||||| | |||||||||| |||||||    
T  20719996 ttttctctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtc-tcaaatggatgttcaaatat 20719912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 25038150 - 25038223
Alignment:
Q  186 ttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    |||||||  ||||| |||| ||||||||||| ||||||||| ||||||||||| |||  |||  ||||||||||    
T  25038150 ttattattctctctcttcctttttctctctctattatttttaaccaatcaaaagagataaaactaaagttatca 25038223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 31006195 - 31006228
Alignment:
Q  266 ttgtcattaaatggatgtacaaatattattgctc 299  Q
    |||||||||||||||||||||||||| |||||||    
T  31006195 ttgtcattaaatggatgtacaaatatcattgctc 31006228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 32873130 - 32873081
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  32873130 ttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 32873081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 16553568 - 16553640
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 252  Q
    |||||||| |||| || ||| |||| ||||||||||||||| ||||| | ||||||||| |||  ||||||||    
T  16553568 atgatgttgttatattttctcttcctttttctctctccattgtttttgatcaatcaaaagagataaaaacaaa 16553640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 36416054 - 36415994
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| | ||||||| ||||||||||| |||| ||| |||||||    
T  36416054 tctctcttcctttttctctctctagtatttttgaccaatcaaaagagagaaaaccaaagtt 36415994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 39595353 - 39595448
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||| || |||||| ||| |||||||    
T  39595353 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt-atcaaatggttgttcaaatat 39595448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 33881712 - 33881585
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| |||||||| |  ||| ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||     
T  33881712 atgatgttattatcctctctcttcctttttctctttttattgttttttaccaatcaaaagagaggaaaacaaagttgtcaccaaaattatcattaaatga 33881613  T
Q  280 atgtacaaatattattgctcttttcaat 307  Q
    |||||||||||| ||||||| |||||||    
T  33881612 atgtacaaatatcattgctcatttcaat 33881585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 5900926 - 5901069
Alignment:
Q  154 aattgagaaatgatatttgtacacagatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag 253  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||| || | |||||||||||||||||||||||| ||| | || |||| |||| ||      
T  5900926 aattgagaaatgatatttgtacaca--tgatgttcttatcatctctctttctttttctctctccattattttttactaataacaaaagagaaaaataaga 5901023  T
Q  254 ttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||| ||| ||||||| |||| ||||||||||||| |||||||    
T  5901024 ttatcactaaagttgtcatgaaattgatgtacaaatatcattgctc 5901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 17157228 - 17157316
Alignment:
Q  211 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||    
T  17157228 tctctccattgtttttgaccaatcaaaagagagaaaagcaaagttatcaccaaagttgtcattaaattgatgtacaaatatcattgctc 17157316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 209 - 300
Target Start/End: Complemental strand, 29609856 - 29609764
Alignment:
Q  209 tctctctccattatttttt-accaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||| ||||||||||| || |||||||| |||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||||||||    
T  29609856 tctctcttcattattttttgacaaatcaaaagagaggaaaacaaagttgtcaccaaagttgtcattaaattgatgtacaaatatcattgctct 29609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 26041374 - 26041493
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||  ||||| |||| |||| |||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||||| ||||||    
T  26041374 atgatgttcttattctctctcttcctttttttctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaatgg 26041473  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  26041474 atgtacaaatatcattgctc 26041493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 27164844 - 27164725
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| |||||| | |||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  |||||    
T  27164844 atgatggtcttatcctctctcttcctttttctttttccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatgg 27164745  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  27164744 atgtacaaatatcattgctc 27164725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 30864424 - 30864305
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  30864424 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaaaagagaaaaacaaggttgtcactaaagttgtcatggaatgg 30864325  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  30864324 atgtacaaatatcattgctc 30864305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 10014936 - 10014851
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||| || |||||||| ||||||| || |||||||||||||||    
T  10014936 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaaaattgtcaccaaagttgtcatcaattggatgtacaaatat 10014851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 25614802 - 25614717
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| |||||||||||| | || |||| ||||||| ||| |||||||||||||||| || | |||||||||||||    
T  25614802 ttttctctctccattgttttttaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattagatgtacaaatat 25614717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 42060747 - 42060832
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||| |||||||||| ||||| ||||||||||| |||| ||  ||||||| |||||||| |||||||||||| |||||||||||||    
T  42060747 ttttttctctccattgtttttgaccaatcaaaagagagaaaggcaaagttgtcaccaaagttgtcattaaatagatgtacaaatat 42060832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 44511203 - 44511324
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||  ||||| |||| |||| |||| ||||| ||||| |||||| | || |||| |||||||| || |||| ||| ||||||| ||||||    
T  44511203 atgatgttcttattctctctcttcctttttttctccccattgtttttgaccaataagaaaagagaaaaacaaaattgtcactaaagttgtcataaaatgg 44511302  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  44511303 atgtacaaatatcattgctctt 44511324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 39369381 - 39369485
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||||||||  |||||| ||    
T  39369381 tctctcttcctttttctctctccattgtttttaaccaataagaaaagagaaaaacaaagttgtcactaaagttgtccttaaatggatgtcaaaatatcat 39369480  T
Q  295 tgctc 299  Q
    |||||    
T  39369481 tgctc 39369485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 33050247 - 33050366
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || ||||  |||||| ||| |||| ||| ||||||| ||||||    
T  33050247 atgatggtcttatcctctctcttcctttttctctctctattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatgaaatgg 33050346  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  33050347 atgtacaaatatcattgctc 33050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 42431787 - 42431898
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  42431787 atgatgatcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 42431886  T
Q  280 atgtacaaatat 291  Q
    ||||||||||||    
T  42431887 atgtacaaatat 42431898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 303
Target Start/End: Original strand, 38978565 - 38978678
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||| ||| ||||||| ||| |||||||||||    
T  38978565 ttatcctctctcttcctttttctctctccattgtttttgacaaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaa-ggatgtacaaa 38978663  T
Q  289 tattattgctctttt 303  Q
    ||| |||||||||||    
T  38978664 tatcattgctctttt 38978678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 116695 - 116814
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||||| ||| |||  ||||||||||||||| ||||| || ||| |||| | || |||||||  || |||| ||| ||||||| ||||||    
T  116695 atgatggtcttatcttttctcttcatttttctctctccattgtttttgacgaataaaaagaaagaaaaacaagattgtcactaaagttgtcatgaaatgg 116794  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  116795 atgtacaaatatcattgctc 116814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 30402168 - 30402081
Alignment:
Q  210 ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||||| |||| |||||||||||| |||| | ||  |||||||||| ||||||||||| |||| |||| ||||||||||||| |||||||    
T  30402168 ctctcttcattgttttttaccaataaaaagaaag--aaacaaagttgtcaccaaaattatcatgaaatagatgtacaaatatcattgctc 30402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 42476557 - 42476464
Alignment:
Q  198 ctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||| |||||||||||| || ||||| |||||| |||| |||  ||||||| ||| || ||||| ||||||| || |||||||||||||||    
T  42476557 ctattcctttttctctctccgttgtttttgaccaataaaaagagaaaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatat 42476464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 2469771 - 2469819
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||    
T  2469771 tctctcttcctttttctctctccattattttttaccaatgaaaatagag 2469819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 20406605 - 20406725
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| ||   ||| |||||||  |||||||| |||||| |||| |||  ||||||||||| || || || |||| |||||||||    
T  20406605 atgatgtttttatcctctctcttaattttcctctctctgttatttttgaccaataaaaagagaaaaaaacaaagttgtcgccgaagttgttattaaatgg 20406704  T
Q  280 atgtacaaatattattgctct 300  Q
    |||| ||||||| ||||||||    
T  20406705 atgtccaaatatcattgctct 20406725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 29162286 - 29162166
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| | |||| |||| |||| |||||||  || |||| ||| |||||||  ||||     
T  29162286 atgatgatcttatcctctctctttctttttctctctccattgtttttgatcaataaaaagagagaaaaacaagattgtcactaaagttgtcatggaatga 29162187  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  29162186 atgtacaaatatcattgctct 29162166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 23330002 - 23330090
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||||||| |||||||||||||||| |||| ||||  |||||| ||| |||||||||||  || |||||| || ||||||||| |||||||    
T  23330002 tctctctctattattttttaccaataaaaagagag--aaacaaggttgtcaccaaaatttccaataaatgaatatacaaatatcattgctc 23330090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 3344955 - 3345044
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgct 298  Q
    |||||||||||||||||| ||   | |||| |||  ||||||| ||| ||  |||||||||||||||||| |||||||||||| ||||||    
T  3344955 tctctctccattatttttgacatgttaaaagagataaaaacaaggttgtcttcaaaattgtcattaaatgaatgtacaaatatcattgct 3345044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 8742473 - 8742558
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||| | | |||| | || |||| ||||||| ||| |||||||| ||||||| || |||||||||||||||    
T  8742473 ttttctctctccattgtttatgatcaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 8742558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 16645623 - 16645554
Alignment:
Q  230 caatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||||| ||||||||||||| || ||| |||| || |||||||||| ||| |||||||| |||||||    
T  16645623 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 16645554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 299
Target Start/End: Complemental strand, 17619984 - 17619915
Alignment:
Q  230 caatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||||| ||||||||||||| || ||| |||| || |||||||||| ||| |||||||| |||||||    
T  17619984 caatcaaaagagaggaaaacaaaattgtcaacaaagttatcattaaatgaatggacaaatatcattgctc 17619915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 301
Target Start/End: Complemental strand, 19880229 - 19880117
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatt-aaatggatgtacaa 287  Q
    ||||| ||||| |||| ||||||||||||||||||||  ||| || | || |||| |||| ||  || |||| ||| |||||||  ||||||||||||||    
T  19880229 ttatcctctctcttcctttttctctctccattattttg-acccataagaagagagaaaaataagattgtcactaaagttgtcatgcaaatggatgtacaa 19880131  T
Q  288 atattattgctctt 301  Q
    ||||||||||||||    
T  19880130 atattattgctctt 19880117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 37385214 - 37385129
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||| ||| ||||| |||||| | || |||| | ||||| ||| |||||||| ||||||| || |||||||||||||||    
T  37385214 ttttctctctcaattgtttttgaccaataagaaaagagaagaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 37385129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 42640933 - 42640986
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  42640933 ttttctctctctattatttttgaccaatcaaaaaagagaaaatcaaagttatca 42640986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 47530272 - 47530187
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||| |||||||||| |||||  ||||| | || | || ||||||| |||||||||||| ||||||| |||| |||||||||||||    
T  47530272 ttttttctctccattgtttttagccaataagaagaaagaaaaacaaggttatcaccaaagttgtcatgaaatagatgtacaaatat 47530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 25332480 - 25332385
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 302  Q
    ||||||||||||||| ||||| |||||| ||||  ||||||||  |||||||||  ||| |||| |  |||||| ||| ||||||||||||||||||    
T  25332480 ttttctctctccattgtttttaaccaataaaaag-gaggaaaaagaagttatcaataaagttgttagcaaatggttgttcaaatattattgctcttt 25332385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 2347057 - 2346947
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  |||||||||||||||  |||| |||||| | || | || |||| || ||| |||| ||| ||||||| ||||| |||||||||    
T  2347057 ttatcctctctcttcttttttctctctccattgcttttgaccaataacaagaaagaaaaataaggttgtcactaaagttgtcataaaatgaatgtacaaa 2346958  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  2346957 tatcattgctc 2346947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 19426659 - 19426728
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| |||||||||||||||||||||  ||||| |||| ||| ||||| |||||| |||||||||    
T  19426659 tctctcttcctttttctctctccattatttttatccaatgaaaagaga-gaaaaaaaagttgtcaccaaaa 19426728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 22331203 - 22331129
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| | ||||| ||| || | ||||||||    
T  22331203 tctctcttcctttttctctctccattgttttttaccaatgaaaagagagcataacaaggttgtcccaaaaattgt 22331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 43255565 - 43255451
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| |||| |||||||||||||||| || ||| | || |||| |||  ||  || ||||||||||| |||| || | ||||||||||    
T  43255565 ttatcatctctcttcctttttttctctccattatttttgactaataagaagagagaaaagtaagattgtcaccaaaattatcatcaattagatgtacaaa 43255466  T
Q  289 tattattgctctttt 303  Q
    ||| ||| |||||||    
T  43255465 tatcattactctttt 43255451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 47424977 - 47424908
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||| ||| || |||||||||    
T  47424977 tctctcttcctttttctctctccattgtttttaaccaataaaaagagaggaaaa-aaaattgtcaccaaaa 47424908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 21037217 - 21037168
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||||||||  |||| ||| |||||||||||| |||||||||||    
T  21037217 ttttctctctccattgattttgaccgatcaaaatagagaaaaacaaagtt 21037168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 21153142 - 21153191
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  21153142 ttttctctctctattatttttgaccaatcaaaagagagaaaatcaaagtt 21153191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 30862715 - 30862768
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  30862715 tctctcttcctttttctctctccattatttttgaccaataaaaagagagaaaaa 30862768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 30982346 - 30982293
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| |||||||| || |||||||||||||||| |||| |||||||||    
T  30982346 tctctcttcctttttctctttcaattattttttaccaataaaaagagaggaaaa 30982293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 36990120 - 36990173
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| |||| ||||    
T  36990120 tctctcttcctttttctctctccattatttttaaccaataaaaaaagagaaaaa 36990173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 44894455 - 44894371
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| |||||||||||| |||| ||||  |||  ||||| |||| |||||| || | |||||||||| |||||||    
T  44894455 ttttctctctccattgttttttaccaatgaaaagagagataaaagaagttgtcacaaaaattatc-tcaaatggatgttcaaatat 44894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 34349019 - 34348971
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  34349019 tctctcttcctttttctctctccattgttttttaccaatgaaaagagag 34348971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 37325800 - 37325728
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 278  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || |||| |||||| |||| |||||    
T  37325800 ttttctctctccattgtttttaaccaataaaaagagagaaaaacaatattgtcactaaaattttcatgaaatg 37325728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 301
Target Start/End: Original strand, 37392116 - 37392228
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    |||| |||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  | ||| |||  ||| |||| |  |||||| ||| ||||    
T  37392116 ttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaa 37392215  T
Q  289 tattattgctctt 301  Q
    ||| |||||||||    
T  37392216 tatcattgctctt 37392228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 35500 - 35382
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||  ||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||| || || |||||||||||||||||| |    
T  35500 atgatgttattattctctctcttcctttttctctctccattatttttgaccaatcaaaagagaggaaaacaaaattttctccaaaattgtcattaaatag 35401  T
Q  280 atgtacaaatattattgct 298  Q
    |||||||||||| ||||||    
T  35400 atgtacaaatatcattgct 35382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 30413736 - 30413620
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 282  Q
    ||||| ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  30413736 atgttgttatcctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaagcaaagttgtcaccaaaattgtcattaaatggatg 30413637  T
Q  283 tacaaatattattgctc 299  Q
    ||||||||| |||||||    
T  30413636 tacaaatatcattgctc 30413620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 43936466 - 43936345
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||||||| ||||||| |    
T  43936466 atgatgttattatcttctctcttcc-ttttctctctccattgtttttgaccaataaaaaaagagaaaaacaaaattatcaccaaaattgtgattaaat-g 43936369  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| |||||||||||    
T  43936368 atgtacaaatatcattgctctttt 43936345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 33003887 - 33004007
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||  ||||| |||| ||| ||||||||||| ||||||| |||| |||| ||||||||| || |||||||||||| ||||||||||| ||    
T  33003887 atgatgttattattctctcttttccttttcctctctccattgttttttatcaataaaaacagaggaaaaaaaggttatcaccaaagttgtcattaaaagg 33003986  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  33003987 atgtacaaatatcattgctct 33004007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 298
Target Start/End: Complemental strand, 12175335 - 12175217
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| |||| ||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||| || |||||||||      
T  12175335 atgatgttattatcctctctcttcctttttttctcttcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcaccaaagttatcattaaataa 12175236  T
Q  280 atgtacaaatattattgct 298  Q
    |||||||||||| ||||||    
T  12175235 atgtacaaatatcattgct 12175217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 10550466 - 10550346
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| ||||||||| ||||||||||| ||| |||| ||||||| ||||||    
T  10550466 atgatgctcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatgg 10550367  T
Q  280 atgtacaaatattattgctct 300  Q
    |||| ||||||| ||| ||||    
T  10550366 atgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 38021420 - 38021539
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||  ||||| |||| ||||||||||||||| ||||| ||||||||||| ||||  ||||||| || |||||||| || ||||||||| |    
T  38021420 atgatgttattattctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagagaaacaaaattgtcaccaaagttatcattaaat-g 38021518  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  38021519 atgtacaaatatcattgctct 38021539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 44484663 - 44484544
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||||| |||| |    
T  44484663 atgatgttcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaagttgtcataaaattg 44484564  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  44484563 atgtacaaatatcattgctc 44484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 36582344 - 36582441
Alignment:
Q  204 ccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||||||||||| |||| ||||| |||||| | ||||||| ||||||| ||| |||||||| ||||||| |||||||||||||||||| |||||||||    
T  36582344 ccttttctctcttcattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatcattgctctt 36582441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 296
Target Start/End: Original strand, 37966420 - 37966536
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||||||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| ||||||    
T  37966420 atgatggtcttatcctctctcttcccttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatgg 37966519  T
Q  280 atgtacaaatattattg 296  Q
    |||||||||||| ||||    
T  37966520 atgtacaaatatcattg 37966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 27540079 - 27540158
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    |||||||||||||| ||||| |||| ||||||||||||| | ||||| ||||||||||| ||||||||||||||||||||    
T  27540079 atgatgttattatcctctctcttcctttttctctctccaatgtttttgaccaatcaaaaaagaggaaaacaaagttatca 27540158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 3196094 - 3195973
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| | || ||| |||||||  |||||    
T  3196094 atgatgatcttatcatctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatgg 3195995  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  3195994 atgtacaaatatcattgctctt 3195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 33030102 - 33029989
Alignment:
Q  187 tattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtaca 286  Q
    ||||||| | ||| |||| ||||||||||||||| ||||  |||||| ||||||||| ||||||| ||| ||| |||| ||||||||| || ||||||||    
T  33030102 tattatcctttctcttcctttttctctctccattgttttcaaccaataaaaatagagaaaaacaaggttgtcatcaaagttgtcattagatagatgtaca 33030003  T
Q  287 aatattattgctct 300  Q
    ||||| ||||||||    
T  33030002 aatatcattgctct 33029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 5962728 - 5962813
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||||||||||||||| |||| || | |||||||||||||    
T  5962728 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcaccaaaattatcatcaattagatgtacaaatat 5962813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 296
Target Start/End: Complemental strand, 22353179 - 22353066
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 282  Q
    ||||| ||||| ||||| |||| |||||||| | |||| ||||  |||||| | || |||| || |||| ||||||||||||||| ||||||||||||||    
T  22353179 atgttgttatcctctctcttcctttttctcttttcattgttttcgaccaataagaagagagaaatacaaggttatcaccaaaattatcattaaatggatg 22353080  T
Q  283 tacaaatattattg 296  Q
    ||||||||| ||||    
T  22353079 tacaaatatcattg 22353066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 30973983 - 30973895
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 283  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||  ||| ||||||||||||||| |||||||||| | ||||||||||    
T  30973983 tctctcttcctttttctctctccattgtttttgaccaataaaaagtgagaaaaacaaagttatcatcaaaattgtcttcaaatggatgt 30973895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 23048069 - 23047971
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| |||||||    
T  23048069 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctc 23047971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 29871353 - 29871239
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || ||||  |||||||||| |||||||| ||||||| |||| |||| |||||    
T  29871353 ttatcctctctcttcttttttctctctccattgtttttaaccaataagaagagagagaaacaaagttgtcaccaaagttgtcatgaaatagatggacaaa 29871254  T
Q  289 tattattgctctttt 303  Q
    ||| || ||||||||    
T  29871253 tatcatggctctttt 29871239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 6884974 - 6885095
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||  |||||| |||||||| ||||| || ||| | || |||| ||||||||||| |||| ||| ||||||| |||||     
T  6884974 atgatggtcttatcctctctcttcttttttctatctccattgtttttgactaataagaagagagaaaaacaaagttgtcactaaagttgtcatgaaatga 6885073  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  6885074 atgtacaaatatcattgctctt 6885095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 12192026 - 12192122
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||||||||||| ||||| |||||| ||||||||| ||| ||| ||| |||||||| || | || || |||||||||||||||    
T  12192026 tctctcttcctttttctctctccattgtttttgaccaataaaaatagagaaaagcaaggttgtcaccaaagttattatcaattggatgtacaaatat 12192122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 9695042 - 9694955
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatatta 293  Q
    |||||||||| |||||||||| ||| || ||||||||| ||| ||| ||| |||||||| ||||||| || ||||| |||||||||||    
T  9695042 ttttctctcttcattatttttgaccgataaaaatagagaaaagcaaggttgtcaccaaagttgtcatcaattggatttacaaatatta 9694955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 36383526 - 36383633
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||| || |||| |    
T  36383526 atgatgttcttatcatctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatgaaattg 36383625  T
Q  280 atgtacaa 287  Q
    ||||||||    
T  36383626 atgtacaa 36383633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 30192358 - 30192236
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||| || ||||| |||||||||  |||||| |||||||| |||||||||||| |||| |||| ||| ||| ||| ||  | ||||| |||| || |||    
T  30192358 atgatatttttatcctctctattcatttttctttctccattgttttttaccaataaaaaaagagaaaagcaaggttttcgtccaaattatcatcaattgg 30192259  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||| ||||||    
T  30192258 atgtacaaatatcattactcttt 30192236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 36909824 - 36909740
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || ||||||||||||||||||    
T  36909824 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatggatgtacaaatat 36909740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 4097068 - 4097128
Alignment:
Q  240 agaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||| ||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||    
T  4097068 agagaaaaacaaggttgtcaccaaaattgttattaaatggatggacaaatatcattgctct 4097128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 38246758 - 38246638
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||| ||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| |||||||  ||| |    
T  38246758 atgatggtcttatcctctctcttcctttttctccctccattgtttttgaccaataagaagagagagaaacaaggttgtcactaaagttgtcatggaattg 38246659  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  38246658 atgtacaaatatcattgctct 38246638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 29893674 - 29893793
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| | |||| | || |||| |||||||| || |||| ||| || ||||  |||||    
T  29893674 atgatggtcttatcctctctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaacttatcatagaatgg 29893773  T
Q  280 atgtacaaatattattgctc 299  Q
    || ||||||||| |||||||    
T  29893774 atatacaaatatcattgctc 29893793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 34139030 - 34138959
Alignment:
Q  195 tctctattcccttttctctctccattatttttta-ccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    |||| ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||||| || ||||||    
T  34139030 tctcaattcctttttctctctccattgttttttaaccaatgaaaatagaggaaaaaaaagttgtcgccaaaa 34138959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 23391141 - 23391247
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| |||||| |||||||||||||| | |||| | || |||| ||||||||||| || | ||| || ||||  ||||||||||||||||| ||    
T  23391141 tctctcttcctttttctttctccattatttttgatcaataagaagagagaaaaacaaagttgtcgctaaagttatcatggaatggatgtacaaatatcat 23391240  T
Q  295 tgctctt 301  Q
    | |||||    
T  23391241 tcctctt 23391247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 26809579 - 26809665
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaa-caaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| ||||||  ||| | | ||||| |||| |||||||||||||||||| || || |||||||||||||    
T  26809579 ttttctctctccattgtttttaaccaatagaaaaataagaaaatcaaaattatcaccaaaattgtcactatatagatgtacaaatat 26809665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 12358403 - 12358488
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||| |||| ||||| |||||| |||| | || ||| ||| ||| |||||||| ||||||| || |||||||||||||||    
T  12358403 ttttctctcttcattgtttttgaccaataaaaagatagaaaagcaaggttgtcaccaaagttgtcatcaattggatgtacaaatat 12358488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 13466056 - 13466007
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| |||| |||| |||||||||||||||| |||||||||||    
T  13466056 ttttctctctctattaattttgaccaatcaaaatagagaaaaacaaagtt 13466007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 14954591 - 14954522
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 264  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||||| ||| ||| ||||    
T  14954591 tctctcttcctttttctctctccattgttttttaccaattaaaaaagagaaaaacaaggttgtcatcaaa 14954522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 299
Target Start/End: Original strand, 33857307 - 33857400
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    ||||||||||||||| ||||| |||||| | || | || |||| |||||| |||||||| ||||| |||||| |||||  |||||| |||||||    
T  33857307 ttttctctctccattgtttttgaccaataagaagacagaaaaataaagttgtcaccaaagttgtccttaaatagatgtcaaaatatcattgctc 33857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 27307223 - 27307131
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||||||||||| ||||| |||||| | || |||| |||| || ||| |||| ||| |||||||  |||||||||| |||||| |||||||||    
T  27307223 tctctctccattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgtcatggaatggatgtataaatatcattgctctt 27307131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 39133786 - 39133858
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 252  Q
    |||||||| |||| |||| | || | ||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  39133786 atgatgttgttattttctttcttactttttctctctccattatttttaaccaataaaaaaagagaaaaacaaa 39133858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 1298258 - 1298333
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||||||  |||| |||  |||||| ||| |||| ||||| ||||||||||| ||||||||| ||||||    
T  1298258 atgatgttattatcccctctcttcttttttctttcttcattgtttttgaccaatcaaaagagaggaaaataaagtt 1298333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 3299112 - 3298993
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||  ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  ||| ||  || ||||||||||| ||||||||| |    
T  3299112 atgatgtcgttatcctctctcttactttttctctctccattgtttttaaccaataagaagagagagaaataagattgtcaccaaaattatcattaaatag 3299013  T
Q  280 atgtacaaatattattgctc 299  Q
    ||||| || ||| |||||||    
T  3299012 atgtataattatcattgctc 3298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 6851666 - 6851591
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||| ||||  ||||| |||  ||||||||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  6851666 atgatgttgttattctctctcttcatttttctctctcaattgtttttgaccaatcaaaagagagaaaaacaaagtt 6851591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 302
Target Start/End: Original strand, 28165208 - 28165315
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||| ||||  ||| || ||| |||  ||| |||| |  |||||| ||| ||||||||||    
T  28165208 tctctcttcctttttctctctccattatttttgaccaataaaaagagagagaaaaaaggttgtcatgaaagttgttagcaaatggttgttcaaatattat 28165307  T
Q  295 tgctcttt 302  Q
    | ||||||    
T  28165308 ttctcttt 28165315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 437
Target Start/End: Original strand, 37480090 - 37480133
Alignment:
Q  394 gcctggtggtattggcctgggacctgagtctgtgctcctcctca 437  Q
    |||||||||||||||| |||||||||||  ||||||||||||||    
T  37480090 gcctggtggtattggcttgggacctgagagtgtgctcctcctca 37480133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 6639470 - 6639416
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    |||| |||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  6639470 ttattttctctcttcctttttctctctccattgttttttaccaatgaaaagagag 6639416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 6851597 - 6851559
Alignment:
Q  261 caaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  6851597 caaagttgtcattaaatggatgtacaaatatcattgctc 6851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 19913863 - 19913929
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcacc 261  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| |||||| |||||    
T  19913863 tctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacc 19913929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 26321689 - 26321620
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| ||||||||||| ||| ||||| |||||| |||| ||| ||||| ||||||||||||||||    
T  26321689 tctctcttcctttttctctctcaattgtttttaaccaatgaaaagaga-gaaaaaaaagttatcaccaaaa 26321620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 34101073 - 34101131
Alignment:
Q  200 attcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatc 258  Q
    ||||| |||| |||||| ||||||||| |||||| |||||||||||||  |||||||||    
T  34101073 attcctttttttctctctattatttttgaccaataaaaatagaggaaatgaaagttatc 34101131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 39744592 - 39744526
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||| |||||| | || ||||||||||| |||  |||| |||||||||||||||| |||||||||||    
T  39744592 ttattttctctctacctttttctctctctattgattttgaccaatcaaaatagagaaaaacaaagtt 39744526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 4061983 - 4062032
Alignment:
Q  252 agttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||| |||| |||||||||||||||||||||| ||||||| ||| |||||    
T  4061983 agttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctt 4062032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 13104564 - 13104633
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 270  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| |||||||||    
T  13104564 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtc 13104633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 23880174 - 23880227
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  23880174 tctctcttcctttttctctctccatttttttttaccaatgaaaagagagaaaaa 23880227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 32750083 - 32750152
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 270  Q
    |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| |||||||||    
T  32750083 ttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtc 32750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 41353478 - 41353417
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaatt 267  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||  ||||| |||| ||||||    
T  41353478 ttttctctctccattatttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaaatt 41353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 16051380 - 16051332
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| ||||    
T  16051380 tctctcttcctttttctctctctattatttttgaccaatcaaaaaagag 16051332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 301
Target Start/End: Original strand, 27540156 - 27540188
Alignment:
Q  269 tcattaaatggatgtacaaatattattgctctt 301  Q
    ||||||||||||||||||||||| |||||||||    
T  27540156 tcattaaatggatgtacaaatatcattgctctt 27540188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 31635802 - 31635742
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||  |||| ||| |||||||    
T  31635802 tctctcttcctttttctctctctattatttttgaccaatcaaagaagagaaaatcaaagtt 31635742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 38572018 - 38572114
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||  || |||||||||||| | ||| |||||| | || |||| ||||||| ||| |||||||| |||| || || || ||||||||||||    
T  38572018 tctctattcatttctctctctccattgtctttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgttatcaattgaatgtacaaatat 38572114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 11089664 - 11089763
Alignment:
Q  204 ccttttctctctccattatttttta-ccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 302  Q
    ||||||||||||| ||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11089664 ccttttctctctctattattttttaaccaatcaaaaaagagaaaaacaaagttgtcaccaaaattgtcattaaatggatgtacaaatatcattgctcttt 11089763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 43587705 - 43587828
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||  ||||| |||| |||||||||||||||  |||||||||||||||| |||| ||||||||||| |||||||| ||||||||||||||    
T  43587705 atgatgttgttattctctctcttcctttttctctctccattgctttttaccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtcattaaatgg 43587804  T
Q  280 atgtacaaatattattgctctttt 303  Q
    || ||||||||| |||||||||||    
T  43587805 atatacaaatatcattgctctttt 43587828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 34972131 - 34972248
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||||||||| |||  |||| |||||||||||||||| | ||||||||| |||| |||||||| || |||||||| |||||||||||| |    
T  34972131 atgatgttattatcttctctcttc--ttttttctctccattatttttgatcaatcaaaaaagagaaaaacaaaattgtcaccaaagttgtcattaaatag 34972228  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  34972229 atgtacaaatatcattgctc 34972248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 38504234 - 38504353
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| || || |||  ||||||||||||||| ||||| ||||||||||| |||| |||||||| || ||||||||||||| |||||||||    
T  38504234 atgatgttgttatcctcactcttcatttttctctctccattgtttttgaccaatcaaaagagagaaaaacaaaattgtcaccaaaattgtaattaaatgg 38504333  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  38504334 atgtacaaatatcattgctc 38504353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 43602430 - 43602311
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| ||||||  ||||| |||| |||||| |||  ||| ||||| ||||||||||| ||||  |||||||||| |||||||| ||||||||||||||    
T  43602430 atgatggtattattctctcttttcctttttctttctatattgtttttgaccaatcaaaagagagagaaacaaagttgtcaccaaagttgtcattaaatgg 43602331  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  43602330 atgtacaaatatcattgctc 43602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 23952562 - 23952673
Alignment:
Q  184 tgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgt 283  Q
    |||| |||||||||||||| | ||||||||||||||||||||| |||||| |||| |||| |||||||| ||||||| ||| ||||||| |||| || ||    
T  23952562 tgttcttatcttctctatttc-ttttctctctccattatttttgaccaataaaaaaagagaaaaacaaaattatcactaaagttgtcataaaatagacgt 23952660  T
Q  284 acaaatattattg 296  Q
    |||||||| ||||    
T  23952661 acaaatatcattg 23952673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 1065481 - 1065604
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||  | || | || ||||||| |||||||| ||| |||||||  |||||    
T  1065481 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaaaaagaagatagaaaaacaaggttatcactaaagttgtcatggaatgg 1065580  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| |||||||||||    
T  1065581 atgtacaaatatcattgctctttt 1065604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 30927938 - 30927819
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| ||||||    
T  30927938 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatgg 30927839  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  30927838 atgtacaaatatcattgctc 30927819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 41273579 - 41273702
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| | || ||| |||||||  |||||    
T  41273579 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgttactaaagttgtcatggaatgg 41273678  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| |||||||||||    
T  41273679 atgtacaaatatcattgctctttt 41273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 299
Target Start/End: Complemental strand, 6105416 - 6105323
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctc 299  Q
    |||| ||||| |||| ||||| ||||||||||| ||||||||| |||||| |||| ||| ||||| |||||||||||||||| ||| |||||||    
T  6105416 ttttttctctacattgtttttgaccaatcaaaagagaggaaaataaagttgtcactaaagttgtctttaaatggatgtacaagtatcattgctc 6105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 6825269 - 6825161
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||| || |||  ||||||| |||||| ||||| ||||||||||||||||    
T  6825269 tctctgttcctttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgacaccaaagttgtcaataaatagatgtacaaatattat 6825170  T
Q  295 tgctctttt 303  Q
    || ||||||    
T  6825169 tgttctttt 6825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 296
Target Start/End: Complemental strand, 41293728 - 41293613
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||||||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||| ||||| |||| ||| |||||||  |||||    
T  41293728 atgatggtcttatcttctctcttccattttctctctccattgtttttgaccaataagaagagagaaaaac-aagttgtcactaaagttgtcatggaatgg 41293630  T
Q  280 atgtacaaatattattg 296  Q
    |||||||||||| ||||    
T  41293629 atgtacaaatatcattg 41293613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 39259053 - 39258943
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| |||||||  ||||||  |||||||||||  ||||||||||||||    
T  39259053 ttatcatctctcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaagattatcattaaaattgtcatggaatggatgtacaaa 39258954  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  39258953 tatcattgctc 39258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 11138986 - 11139071
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||| |||||||||| |||||| |||| | || ||||||||||| |||||||| ||||||| || | |||||||||||||    
T  11138986 ttttctctcttcattatttttgaccaataaaaagatagaaaaacaaagttgtcaccaaagttgtcatcaatttgatgtacaaatat 11139071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 19723213 - 19723093
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| || ||| | || |||| ||||||| ||| |||| ||| ||||||| | || |    
T  19723213 atgatggtcttatcctctctcttcctttttctctctccattgtttttgactaataagaagagagaaaaacaaggttgtcactaaagttgtcatgatatag 19723114  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  19723113 atgtacaaatatcattgctct 19723093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 30129500 - 30129584
Alignment:
Q  207 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||||||||||||| |||||| | || |||| ||| ||||||| |||||||| ||||||| || |||||||||||||||    
T  30129500 tttctttctccattatttttgaccaataagaagagagaaaagcaaagttgtcaccaaagttgtcatcaattggatgtacaaatat 30129584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 29509330 - 29509405
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||||||| ||||| |||| |||||||||| |||| ||||| |||||| |||| ||||||||||||||||    
T  29509330 atgatattattatcctctctcttcctttttctctcttcattgtttttgaccaataaaaagagaggaaaacaaagtt 29509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 2597146 - 2597056
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||||||| ||||||| || || ||||||||||||    
T  2597146 ttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattgaatgtacaaatat 2597056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 33817247 - 33817337
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 296  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||||||  || |||| |||||||| || |||| ||||||||||||| ||||    
T  33817247 ttttctctctccattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatcattg 33817337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 5925145 - 5925230
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||||||||| |||||| | ||||||| |||| || ||| |||  ||| ||||||| ||||||||||||| ||||    
T  5925145 ttttctctctccattatttttgaccaataagaatagagaaaaataaggttgtcataaaagttgtcatcaaatggatgtacatatat 5925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 302
Target Start/End: Original strand, 14228786 - 14228879
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctcttt 302  Q
    ||||||| |||| ||||| |||||| |||| |||| |||| ||| || |||| |||||| |||| ||||||||||||| |||| ||||||||||    
T  14228786 tctctcttcattgtttttgaccaataaaaaaagagaaaaataaaattgtcactaaaattatcatgaaatggatgtacatatatcattgctcttt 14228879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 14531683 - 14531804
Alignment:
Q  178 agatgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaat 277  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||  | |||| | || |||| |||| || ||| |||  ||  ||||||| | ||    
T  14531683 agatgatgttcttatcttctctattcatttttctctctccattgttttagatcaataagaagagagaaaaataaggttgtcattaatgttgtcatgagat 14531782  T
Q  278 ggatgtacaaatattattgctc 299  Q
     |||||||||||||||||||||    
T  14531783 agatgtacaaatattattgctc 14531804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 37562133 - 37562037
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| |||||| |||||||| ||||| |||||| | || |||| ||||||| ||| ||| |||| ||||||| || |||||||||||||||    
T  37562133 tctctcttcctttttctttctccattgtttttgaccaataagaagagagaaaaacaaggttgtcatcaaagttgtcatcaattggatgtacaaatat 37562037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 40211754 - 40211635
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||  ||||| || | ||||||||||||||| ||||| |||||| | || |||| ||||||||||   || | || |||| ||| |||||    
T  40211754 atgatgttgttattatctctcttactttttctctctccattgtttttaaccaataagaagagagaaaaacaaagtatacaactaagttgttattcaatgg 40211655  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  40211654 atgtacaaatatcattgctc 40211635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 6849466 - 6849408
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaa 247  Q
    |||| |||||| |||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  6849466 ttattttctctcttcctttttctctctctattattttttaccaatagaaatagaggaaa 6849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 11879482 - 11879412
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||| | |||||||    
T  11879482 tctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgttaccaaaa 11879412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 11896898 - 11896828
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||| |||| ||||  ||||| | |||||||    
T  11896898 tctctcttcctttttctctctccattatttttaaccaatcaaaagagagaaaaaggaagttgttaccaaaa 11896828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 36064103 - 36064205
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| |||| |||||||||||||||| |||||| |||| |||  ||| |||  || |||||||| || |||| || ||||||||||||    
T  36064103 ttatcatctctcttcctttttttctctccattatttttgaccaataaaaagagataaaagcaagtttgtcaccaaagttatcatcaattggatgtacaaa 36064202  T
Q  289 tat 291  Q
    |||    
T  36064203 tat 36064205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 36497734 - 36497836
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||||||||| || | ||||||||||| ||| ||||| |||||| |||| |||| ||||||| ||| | | |||| ||||||| || | ||||||||||    
T  36497734 ttatcttctctcttactttttctctctctattgtttttaaccaataaaaagagagaaaaacaaggttgttatcaaagttgtcatcaattagatgtacaaa 36497833  T
Q  289 tat 291  Q
    |||    
T  36497834 tat 36497836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 43186386 - 43186469
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||||||||  ||||||| || |||| |||||||| ||  |||| ||||||||||||    
T  43186386 ttttctctctccattgtttttgaccaataaaaatagag--aaacaaaattgtcactaaaattgttatggaatgaatgtacaaatat 43186469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 5924900 - 5924985
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||||||||| |||||| | || |||| |||| || ||| |||  ||| ||||||| ||||||||||||| ||||    
T  5924900 ttttctctctccattatttttgaccaataagaagagagaaaaataaggttgtcatgaaagttgtcatcaaatggatgtacatatat 5924985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 12783815 - 12783762
Alignment:
Q  250 aaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 303  Q
    |||||| |||| |||||||||||||||||||||| ||||||| ||| |||||||    
T  12783815 aaagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctctttt 12783762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 34765831 - 34765746
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| |||| |||| |||  || ||| |||| ||||||||||| || | |||||||||||||    
T  34765831 ttttctctctccattgtttttgaccaataaaaaaagagaaaagtaaggttgtcactaaaattgtcatcaattagatgtacaaatat 34765746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 36593778 - 36593673
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| | ||||||||||||| |||||  | ||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| ||    
T  36593778 tctctcttccttcttctctctccattgtttttggctaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcat 36593679  T
Q  295 tgctct 300  Q
    ||||||    
T  36593678 tgctct 36593673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 37033093 - 37033029
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 260  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||||||| |||||||||||    
T  37033093 tctcttttcctttttctctctccattgtttttgaccaatgaaaa-agaggaaaaaaaagttatcac 37033029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 39153665 - 39153612
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||||||    
T  39153665 ttttctctctctattatttttgaccaatcaaaagagagaaaatcaaagttatca 39153612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 272
Target Start/End: Original strand, 13884380 - 13884472
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcat 272  Q
    |||||||| ||||| ||||| |||| ||||||||||||||| ||||| | |||| | || |||| |||||||| || |||| ||| |||||||    
T  13884380 atgatgttcttatcatctctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaacaaaattgtcactaaagttgtcat 13884472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 30925652 - 30925577
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    |||| |||||| |||| ||||||||||||||| ||||| |||||| |||| ||| ||||| |||||| |||||||||    
T  30925652 ttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagaga-gaaaaaaaagttgtcaccaaaa 30925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 40719636 - 40719576
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||| |||| ||||||||||| ||||||||| ||||||||||| |||| ||| |||||||    
T  40719636 tctctcttcctttttctctctctattatttttgaccaatcaaaagagagaaaaccaaagtt 40719576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 303
Target Start/End: Complemental strand, 6746041 - 6745926
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaag-ttatcaccaaaattgtcattaaatggatgtacaa 287  Q
    ||||| ||||| |||| ||||||| | ||||| ||||| | |||| | || |||| ||||| ||| || |||| |||||||||||  |||||||||||||    
T  6746041 ttatcctctctcttcctttttctccccccattgtttttaatcaataagaagagagaaaaactaaggttgtcactaaaattgtcatggaatggatgtacaa 6745942  T
Q  288 atattattgctctttt 303  Q
    |||  |||||||||||    
T  6745941 ataccattgctctttt 6745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 41519951 - 41520010
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagagg-aaaacaaagttatcaccaaaatt 267  Q
    |||||||||||| ||||| |||||| |||| ||||| ||||||| |||||||||||||||    
T  41519951 tctctctccattgtttttgaccaataaaaagagaggaaaaacaaggttatcaccaaaatt 41520010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 44086503 - 44086440
Alignment:
Q  196 ctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    |||| ||||||||||||| |||||||||||| ||||||  ||| |||||||||  |||||||||    
T  44086503 ctctcttcccttttctctttccattatttttgaccaatagaaagagaggaaaaggaagttatca 44086440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 6656337 - 6656227
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  |||||||| |||||| ||||| | |||| | || |||| ||||||| ||| |||| |||||| ||||  ||||||||||||||    
T  6656337 ttatcctctctcttcatttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaa 6656238  T
Q  289 tattattgctc 299  Q
    ||  |||||||    
T  6656237 taccattgctc 6656227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 6736739 - 6736629
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||  |||||||| |||||| ||||| | |||| | || |||| ||||||| ||| |||| |||||| ||||  ||||||||||||||    
T  6736739 ttatcctctctcttcatttttctctttccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaaattatcatggaatggatgtacaaa 6736640  T
Q  289 tattattgctc 299  Q
    ||  |||||||    
T  6736639 taccattgctc 6736629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 7129618 - 7129707
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||| |||||||||||| || ||||| |||||| | || |||| ||||||||||| ||| |||| |||| || ||||| ||||||||||||    
T  7129618 ttcctttttctctctccgttgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgt-atgaaatgaatgtacaaatat 7129707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 8888326 - 8888428
Alignment:
Q  190 tatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta-aatggatgtacaaa 288  Q
    |||| ||||| |||| ||||||||||||||| ||||| |||||| | ||  ||| ||| ||| ||| |||||||| |||||| || ||||||| ||||||    
T  8888326 tatcctctctcttcctttttctctctccattgtttttaaccaataagaaatgagaaaatcaaggttgtcaccaaagttgtcactataatggatatacaaa 8888425  T
Q  289 tat 291  Q
    |||    
T  8888426 tat 8888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 20288606 - 20288716
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| | || ||  ||||||||||||||    
T  20288606 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaa 20288705  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  20288706 tatcattgctc 20288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 21075235 - 21075345
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| || | ||||||||||||||| ||||| |||||| | || ||||  |||||| ||| |||| ||| | || ||  ||||||||||||||    
T  21075235 ttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagagaaacaacgttgtcactaaagtcgtaatggaatggatgtacaaa 21075334  T
Q  289 tattattgctc 299  Q
    ||| |||||||    
T  21075335 tatcattgctc 21075345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 22836131 - 22836057
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| | ||||| |||||| | ||||||||    
T  22836131 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagcacaacaaggttatcccaaaaattgt 22836057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 34474028 - 34474137
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagag-gaaaacaaagttatcaccaaaa-ttgtcattaaatggatgtacaaatatt 292  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||||  ||||| ||||||||| |||| || |||||| ||| |||||||     
T  34474028 tctctcttcctttttctctctccattgtttttaaccaatgaaaaaagagagaaaaagaagttgtcaccaaaagttgt-atgaaatggttgttcaaatatc 34474126  T
Q  293 attgctctttt 303  Q
    ||| |||||||    
T  34474127 attactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 35595300 - 35595390
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattg 296  Q
    |||||| |||||||| |||||||||||| | || |||| ||| ||| ||| |||||||| || |||||| |  ||||||||||||| ||||    
T  35595300 ttttctttctccattgttttttaccaataagaagagagaaaagcaaggttgtcaccaaacttatcattagacagatgtacaaatatcattg 35595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 9208114 - 9208065
Alignment:
Q  251 aagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||| |||| |||||||||||||||||||||| ||||||| ||| ||||    
T  9208114 aagttgtcacaaaaattgtcattaaatggatgttcaaatatcatttctct 9208065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 13565483 - 13565402
Alignment:
Q  222 ttttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 303  Q
    |||||||||||| | |||| || ||| ||| ||| |||  ||| |||| ||||||| ||||||||||||| |||||||||||    
T  13565483 ttttttaccaataagaataaagaaaagcaaggttgtcattaaagttgtgattaaattgatgtacaaatatcattgctctttt 13565402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 27630934 - 27630893
Alignment:
Q  262 aaaattgtcattaaatggatgtacaaatattattgctctttt 303  Q
    ||||||||||| |||||||||||||||||| ||| |||||||    
T  27630934 aaaattgtcataaaatggatgtacaaatatcatttctctttt 27630893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 28473537 - 28473484
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaa 248  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| |||| ||||    
T  28473537 tctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 28473484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 30608691 - 30608642
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||||||  |||||||||||||||||||| | || |||||||||||    
T  30608691 ttttctctctctgttattttttaccaatcaaaagatagaaaaacaaagtt 30608642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 300
Target Start/End: Original strand, 34970300 - 34970389
Alignment:
Q  211 tctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||||||||| ||||| |||||| | || |||| ||||||||||| | || ||| ||||| ||||||| ||||  |||||| ||||||||    
T  34970300 tctctccattgtttttaaccaataagaagagagaaaaacaaagttgttactaaagttgtccttaaatgaatgtcaaaatatcattgctct 34970389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Original strand, 39027557 - 39027606
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaa 238  Q
    |||| |||||| || | |||||||||||||||||||||||||||| ||||    
T  39027557 ttattttctctctttctttttctctctccattattttttaccaataaaaa 39027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 11114673 - 11114613
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    ||||| |||| |||||| |||| ||||||||||| ||||||||| ||||||  ||||||||    
T  11114673 atgtttttattttctctcttcctttttctctctctattatttttgaccaatagaaatagag 11114613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 22767208 - 22767284
Alignment:
Q  194 ttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 270  Q
    |||||| |||| ||||||||||||||| ||||| |||||| |||| |||| ||||  ||||| |||| ||| |||||    
T  22767208 ttctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtc 22767284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 37568590 - 37568498
Alignment:
Q  209 tctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    |||||||| ||| ||||| |||||| | || | || ||||||| ||| |||| ||| || | || |||||||||||||||||| |||||||||    
T  37568590 tctctctctattgtttttgaccaataagaaaaaagaaaaacaatgttgtcactaaagttataatgaaatggatgtacaaatatcattgctctt 37568498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 40102102 - 40102150
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagag 243  Q
    ||||| |||| ||||||||||||||| |||||||||||| |||| ||||    
T  40102102 tctctcttcctttttctctctccatttttttttaccaatgaaaagagag 40102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 40791955 - 40791915
Alignment:
Q  395 cctggtggtattggcctgggacctgagtctgtgctcctcct 435  Q
    |||||||||||||||||||||||| ||  ||||||||||||    
T  40791955 cctggtggtattggcctgggacctcagaatgtgctcctcct 40791915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 10385478 - 10385599
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| |||||||||| ||||||||||||||| ||||| ||||||||||| |||| ||| |||| || |||||||| || |||||||||||    
T  10385478 atgatgttgttatcctctctattcctttttctctctccattgtttttgaccaatcaaaaaagagaaaagcaaaattgtcaccaaagttatcattaaatgg 10385577  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  10385578 atgtacaaatatcattgctctt 10385599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 43196096 - 43195977
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||  ||||| |||| ||||||||||||||| ||||| ||||||||||| |||| | | |||||||||||||||| |||||||||||| |    
T  43196096 atgatgttgttattctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaacatcaaagttatcaccaaagttgtcattaaatag 43195997  T
Q  280 atgtacaaatattattgctc 299  Q
    ||||||||||||||||||||    
T  43195996 atgtacaaatattattgctc 43195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 49189211 - 49189096
Alignment:
Q  187 tattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtaca 286  Q
    ||||||| ||||| || | ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||    
T  49189211 tattatcctctctctttctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaaattgtcaccaaagttgtcattaaatggatgtaca 49189112  T
Q  287 aatattattgctcttt 302  Q
    ||||| |||| |||||    
T  49189111 aatatcattgttcttt 49189096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 5383823 - 5383943
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| |||| ||||| |||| |||||  |||||||||| |||| ||||||||||| |||||||| |||| |||||||||    
T  5383823 atgatgttgttatcctctctcttcctttttttctcttcattgtttttagccaatcaaaagagagaaaaacaaagttgtcaccaaagttgtaattaaatgg 5383922  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  5383923 atgtacaaatatcattgctct 5383943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 37669462 - 37669582
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||| ||||| |||| ||||  ||||| ||| ||||| ||||||||||| |||||| ||||||||| ||||| ||||| ||||||||||     
T  37669462 atgatgttattatcctctctcttcctttttgactctctattgtttttgaccaatcaaaaaagaggagaacaaagttgtcaccgaaattatcattaaatga 37669561  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  37669562 atgtacaaatatcattgctct 37669582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 2257701 - 2257617
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaa 264  Q
    ||||||||||||||||| || |||| ||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||| ||||    
T  2257701 atgatgttattatcttcacttttcctttttctctctccattgtttttgaccaatcaaaagagaggaaaacaaagttgtcatcaaa 2257617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 6829792 - 6829670
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||| ||||||||| |||||| | || |||| |||||||  || |||| ||| |||||||  |||||    
T  6829792 atgatggtcttatcatctctcttcctttttctctctctattatttttgaccaataagaagagagaaaaacaagattgtcactaaagttgtcatggaatgg 6829693  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||||||||||    
T  6829692 atgtacaaatatcattgctcttt 6829670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 290
Target Start/End: Complemental strand, 36669377 - 36669267
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  36669377 atgatgtttttatcctctctcttcctttttctctctccattatttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 36669278  T
Q  280 atgtacaaata 290  Q
    || ||||||||    
T  36669277 atttacaaata 36669267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 13813622 - 13813743
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||| ||  |||||    
T  13813622 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttatggaatgg 13813721  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| |||||||||    
T  13813722 atgtacaaatatcattgctctt 13813743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 19920852 - 19920949
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctttt 303  Q
    |||||||||| |||| ||||| |||||| | || |||| ||||||||||| |||||||| ||||| ||||||||||||  |||||| |||||||||||    
T  19920852 ttttctctcttcattgtttttgaccaataagaagagagaaaaacaaagttgtcaccaaagttgtccttaaatggatgtcaaaatatcattgctctttt 19920949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 27578246 - 27578366
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | ||||||| ||||||| ||| | || |||||||||||  ||||     
T  27578246 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaatagagaaaaacaaggttgttactaaaattgtcatggaatga 27578345  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  27578346 atgtacaaatatcattgctct 27578366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 26501359 - 26501478
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| |||||||||  ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||  ||| |||||||  ||| |    
T  26501359 atgatgttcttatcctctctattcatttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcattaaagttgtcatgtaatag 26501458  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  26501459 atgtacaaatatcattgctc 26501478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 39669873 - 39669964
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcatta 274  Q
    ||||||||||| |||||||| | ||||||||||||||| ||||  |||||| ||||||||| |||| |||||| ||| |||| |||||||||    
T  39669873 atgttattatcatctctatttctttttctctctccattgttttcaaccaataaaaatagagaaaaataaagttgtcatcaaagttgtcatta 39669964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 50035545 - 50035426
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    ||||| || ||||| ||||| |||| ||||||||||| ||| ||||| |||||| | || |||| |||| |||||| |||| ||| ||||||| |||| |    
T  50035545 atgatatttttatcatctctcttcctttttctctctctattctttttgaccaataacaaaagagaaaaataaagttgtcactaaagttgtcatgaaatag 50035446  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  50035445 atgtacaaatatcattgctc 50035426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 302
Target Start/End: Complemental strand, 3291432 - 3291310
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| |||||||| |||||||||||| |||||  | || ||||  |||||| |||||||  |||||||||||  |||||    
T  3291432 atgatggtcttatcatctctcttcctttttctctttccattatttttgaccaaaaagaagagagagaaacaaggttatcattaaaattgtcatggaatgg 3291333  T
Q  280 atgtacaaatattattgctcttt 302  Q
    |||||||||||| ||| ||||||    
T  3291332 atgtacaaatatcattactcttt 3291310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 42843325 - 42843240
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| ||||||||||| |||| || |||||||||||||||    
T  42843325 ttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaaattatcatcaattggatgtacaaatat 42843240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 7371955 - 7371835
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| |||||  ||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||||||  ||| |||||||  |||||    
T  7371955 atgatggtcttatcctctctcctcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttatcagtaaagttgtcatggaatgg 7371856  T
Q  280 atgtacaaatattattgctct 300  Q
    ||||||| |||| || |||||    
T  7371855 atgtacatatatcatcgctct 7371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 50777415 - 50777319
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| |||| |||||| ||| ||||| |||||| | || |||| ||||||| ||| |||||||||||||||| || |||||||||||||||    
T  50777415 tctctcttcctttttatctctctattgtttttaaccaataagaagagagaaaaacaaggttgtcaccaaaattgtcatcaattggatgtacaaatat 50777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 291
Target Start/End: Original strand, 9011709 - 9011820
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| || | ||||||||||||||| ||||| |||||| | || |||| |||||||  || |||| || |||||||| ||||||    
T  9011709 atgatggtcttatcctctctctttctttttctctctccattgtttttgaccaataagaagagagaaaaacaagattgtcactaacattgtcatgaaatgg 9011808  T
Q  280 atgtacaaatat 291  Q
    ||||||||||||    
T  9011809 atgtacaaatat 9011820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 291
Target Start/End: Original strand, 50797853 - 50797955
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaa 288  Q
    ||||| ||||| |||| ||||||||||||||||||||| |||||| |||| |||  |||||||  || |||||||| || |||| || | ||||||||||    
T  50797853 ttatcatctctcttcctttttctctctccattatttttgaccaataaaaagagataaaaacaagtttgtcaccaaagttatcatcaattagatgtacaaa 50797952  T
Q  289 tat 291  Q
    |||    
T  50797953 tat 50797955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 10302324 - 10302271
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    ||||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  10302324 ttttctctctctattattttttaccaatcaaaagagagaaaatcaaagttatca 10302271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 25130767 - 25130888
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||| |||| |||| ||||| |||||| | || |||| ||||||| ||| |||| ||| ||||||| |||| |    
T  25130767 atgatgatcttatcctctctcttcctttttccctcttcattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatag 25130866  T
Q  280 atgtacaaatattattgctctt 301  Q
    |||||||||||| | |||||||    
T  25130867 atgtacaaatatcactgctctt 25130888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 25995524 - 25995647
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaa--at 277  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| || ||| |||  ||| ||||||| ||  ||    
T  25995524 atgatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgtcatgaaatat 25995623  T
Q  278 ggatgtacaaatattattgctctt 301  Q
     ||||||||||||| |||||||||    
T  25995624 agatgtacaaatatcattgctctt 25995647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 27895752 - 27895649
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| ||| ||||| ||||||| ||||  |||||| ||    
T  27895752 tctctcttcctttttctctctccatt-tttttaaccaataagaagagagaaaaacaaagttgtcactaaagttgtccttaaatgaatgtcaaaatatcat 27895654  T
Q  295 tgctc 299  Q
    |||||    
T  27895653 tgctc 27895649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 29489366 - 29489243
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||  ||||||||||||||| ||||| |||||| | || | || ||||||| ||| |||| ||| ||||||| ||||      
T  29489366 atgatggtcttatcctctctcttcttttttctctctccattgtttttgaccaataagaagaaagaaaaacaaggttgtcactaaagttgtcatgaaatat 29489267  T
Q  280 atgtacaaatattattgctctttt 303  Q
    |||||||||||| | |||||||||    
T  29489266 atgtacaaatatcactgctctttt 29489243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 29362690 - 29362624
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| |||| ||||||||||||||| ||||| |||||| | || |||| |||||||||||    
T  29362690 ttatcttctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagtt 29362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 8670162 - 8670215
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    ||||||||||| ||||||||| ||||||||||| | || |||||||||||||||    
T  8670162 ttttctctctctattatttttgaccaatcaaaagatagaaaaacaaagttatca 8670215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 51193114 - 51193029
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||||||||||||||  ||||| | || |||| ||||||| ||| |||  ||| ||||||| ||||||||||||| ||||    
T  51193114 ttttctctctccattatttttggccaataagaagagagaaaaacaatgttgtcatgaaagttgtcatcaaatggatgtacatatat 51193029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 24749669 - 24749629
Alignment:
Q  260 ccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  24749669 ccaaaattgttattaaatggatgtacaaatatcattgctct 24749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 27563617 - 27563657
Alignment:
Q  261 caaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  27563617 caaaattgtcattaaatggatgtacaaatatcattgttctt 27563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 42615936 - 42615996
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    |||||||| | ||||||||||| ||||||||| ||||||||||| | || |||||||||||    
T  42615936 tctctatttctttttctctctctattatttttgaccaatcaaaaaatagaaaaacaaagtt 42615996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 43457823 - 43457716
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 282  Q
    |||||||| || ||||| |||| ||||||||||||||| ||||| | |||| |||| | || ||||||| ||| ||| |||| ||||| | |||||||||    
T  43457823 atgttattttcctctctcttcctttttctctctccattctttttgatcaat-aaaaaacagaaaaacaaggttgtcatcaaatttgtcttcaaatggatg 43457725  T
Q  283 tacaaatat 291  Q
    |||| ||||    
T  43457724 tacatatat 43457716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 7078495 - 7078396
Alignment:
Q  192 tcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||| |||| ||| ||||||||||| ||||| |||||| | || ||||  |||||| ||| ||| |||| ||||| | ||||||||||||| ||||    
T  7078495 tcttctctcttccttttcctctctccattgtttttgaccaattagaaaagagagaaacaaggttgtcatcaaagttgtcttcaaatggatgtacatatat 7078396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 265
Target Start/End: Original strand, 15061924 - 15061994
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaa 265  Q
    ||||| |||| ||||||||||||||| |||||  ||||| |||| |||| |||| |||||| |||||||||    
T  15061924 tctctcttcctttttctctctccattgtttttatccaataaaaagagagaaaaaaaaagttgtcaccaaaa 15061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 26585180 - 26585122
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaa 238  Q
    |||||| | ||||| ||||| |||| ||||||||||||||||||||| |||||| ||||    
T  26585180 atgatggtcttatcctctctcttcctttttctctctccattatttttgaccaataaaaa 26585122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 46902708 - 46902778
Alignment:
Q  222 ttttttaccaatcaaaatagaggaaaacaaa-gttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||||||| | || ||||||||| ||| ||| |||| ||||||||||| || |||||||||||||||    
T  46902708 ttttttaccaataagaagagaggaaaaaaaaagttgtcactaaaattgtcatcaattggatgtacaaatat 46902778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 366748 - 366801
Alignment:
Q  207 tttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcac 260  Q
    |||||||||||||| ||||| |||||| |||| ||||||||| |||||| ||||    
T  366748 tttctctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtcac 366801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 4618725 - 4618786
Alignment:
Q  197 tctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatc 258  Q
    |||||||| |||| |||||||||||||||| |||||| |||| |||| | ||||| ||||||    
T  4618725 tctattcctttttttctctccattatttttgaccaatgaaaaaagagaacaacaaggttatc 4618786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 303
Target Start/End: Complemental strand, 22389517 - 22389411
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| |||||| |||||||||||||| |||||| |||| |||| ||||  ||||| |||| ||| |||  || |||||| ||| ||||||| ||    
T  22389517 tctctcttcctttttctttctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg--atcaaatggttgttcaaatatcat 22389420  T
Q  295 tgctctttt 303  Q
    | |||||||    
T  22389419 tactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 27563551 - 27563620
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaa 252  Q
    ||||| ||||||| | | |||| ||||||||||||||| ||| | ||||||||||| |||| ||||||||    
T  27563551 atgttgttatcttttatcttcctttttctctctccattgtttatgaccaatcaaaagagagaaaaacaaa 27563620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 51704720 - 51704683
Alignment:
Q  266 ttgtcattaaatggatgtacaaatattattgctctttt 303  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  51704720 ttgtcattaaatggatatacaaatatcattgctctttt 51704683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 51704794 - 51704737
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaa 237  Q
    ||||||||||| | |||| |||||  | ||||||||||||||||||| ||||||||||    
T  51704794 atgatgttattgttttctttattctttcttctctctccattatttttgaccaatcaaa 51704737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 259
Target Start/End: Complemental strand, 3606060 - 3606024
Alignment:
Q  223 tttttaccaatcaaaatagaggaaaacaaagttatca 259  Q
    |||| |||||||||||||||| |||||||||||||||    
T  3606060 ttttgaccaatcaaaatagagaaaaacaaagttatca 3606024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 8905801 - 8905869
Alignment:
Q  189 ttatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttat 257  Q
    |||| |||||| |||| |||||| |||| ||||||||| |||||||| |  |||| |||||||||||||    
T  8905801 ttattttctctcttcctttttctttctctattatttttgaccaatcatagaagagaaaaacaaagttat 8905869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 25302638 - 25302562
Alignment:
Q  194 ttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtc 270  Q
    |||||| |||| ||||||||||| ||| ||||| |||||| |||| |||| |||| |||||| ||||  ||||||||    
T  25302638 ttctctcttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacataaattgtc 25302562  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 35043712 - 35043608
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| |||| |||||||||||||||| |||||| |||| |||| ||||  | ||| |||  |||||||| |  |||||| ||| ||||||| ||    
T  35043712 tctctcttcctttttatctctccattatttttaaccaataaaaagagagaaaaatgaggttgtcatgaaaattgttagcaaatggttgttcaaatatcat 35043613  T
Q  295 tgctc 299  Q
    |||||    
T  35043612 tgctc 35043608  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 40610308 - 40610403
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| ||||  |||  ||||| |||| ||| ||||| | |||||||||| |||||||    
T  40610308 tctctcttcctttttctctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtc-tcaaatggatgttcaaatat 40610403  T

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Target: scaffold0172 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 180 - 299
Target Start/End: Original strand, 17039 - 17158
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||||||||  ||||| |||  ||||||||||||||| ||||| |||||||| || ||||  |||||||||| |||||||| ||||||||||||||    
T  17039 atgatgttattattctctctcttcttttttctctctccattgtttttgaccaatcagaagagagagaaacaaagttgtcaccaaagttgtcattaaatgg 17138  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  17139 atgtacaaatatcattgctc 17158  T

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Target: scaffold0514 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 1488 - 1383
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||||||| |||| |||||||||||  ||||||||||||||||| ||    
T  1488 tctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaagttgtcactaaaattgtcatggaatggatgtacaaatatcat 1389  T
Q  295 tgctct 300  Q
    ||||||    
T  1388 tgctct 1383  T

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Target: scaffold0085 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 299
Target Start/End: Complemental strand, 31307 - 31188
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||||| ||||| ||||| |||| |||| |||||||||||||||| |||||| | || |||| ||||||||||| |||| |||||| ||||  ||| |    
T  31307 atgatgttcttatcctctctcttcctttttatctctccattatttttgaccaataagaacagagaaaaacaaagttgtcactaaaattatcatgtaatag 31208  T
Q  280 atgtacaaatattattgctc 299  Q
    |||||||||||| |||||||    
T  31207 atgtacaaatatcattgctc 31188  T

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Target: scaffold0002 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 147263 - 147143
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatgg 279  Q
    |||||| | ||||| ||||| |||| ||||||||||||||| ||||| |||||| | || |||| ||||||| ||| |||| ||| |||||||  |||||    
T  147263 atgatggtcttatcgtctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatgg 147164  T
Q  280 atgtacaaatattattgctct 300  Q
    |||||||||||| ||||||||    
T  147163 atgtacaaatatcattgctct 147143  T

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Target: scaffold0522 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 2496 - 2392
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| | ||||||||||||||||||| |||||| |||| |||| ||| |||  || ||||||||||| |||| || ||||||||||||||| ||    
T  2496 tctctcttccttcttctctctccattatttttgaccaataaaaagagagaaaatcaagattgtcaccaaaattatcatcaattggatgtacaaatatcat 2397  T
Q  295 tgctc 299  Q
    |||||    
T  2396 tgctc 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 301
Target Start/End: Complemental strand, 249123 - 249028
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctctt 301  Q
    ||||||||||||||| ||||| | |||| | || |||| ||||||| ||| |||| ||| |||||||  ||||||||||||||||| |||||||||    
T  249123 ttttctctctccattgtttttgatcaataagaagagagaaaaacaaggttgtcactaaagttgtcatggaatggatgtacaaatatcattgctctt 249028  T

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Target: scaffold0121 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 302
Target Start/End: Original strand, 29852 - 29969
Alignment:
Q  186 ttattatcttctctattccctttt-ctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgta 284  Q
    |||||||| ||||| |||| |||| ||||||||| | ||| | | |||| |||| |||| ||||||| ||| | || ||| |||||||||||||||||||    
T  29852 ttattatcatctctcttccttttttctctctccaatgtttctgatcaataaaaagagagaaaaacaaggttgtaactaaagttgtcattaaatggatgta 29951  T
Q  285 caaatattattgctcttt 302  Q
    ||||||| |||| |||||    
T  29952 caaatatcattgatcttt 29969  T

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Target: scaffold0119 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 2230 - 2158
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagtt 255  Q
    ||||||||||| ||||| |||| |||||||| |  ||||||||| | ||||||||| ||||||||||||||||    
T  2230 atgttattatcctctctcttcctttttctctttttattatttttgatcaatcaaaagagaggaaaacaaagtt 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 291
Target Start/End: Original strand, 5146 - 5254
Alignment:
Q  183 atgttattatcttctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatg 282  Q
    ||||| ||||| ||||| |||  |||||||| |||||||||||| |||||| ||||  ||  ||| ||||||| ||||||||||||||| || || |||     
T  5146 atgtttttatcatctctcttcttttttctctttccattatttttaaccaataaaaagtgaaaaaatcaaagttgtcaccaaaattgtcactatatagata 5245  T
Q  283 tacaaatat 291  Q
    |||||||||    
T  5246 tacaaatat 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 18674 - 18777
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattat 294  Q
    ||||| |||| ||||||||||||||| ||||| || ||| | ||||||| |||| || |||||||| ||| ||||| |  ||||||||||||||||| ||    
T  18674 tctctcttcctttttctctctccattgtttttgactaataagaatagagaaaaataaggttatcactaaagttgtc-tggaatggatgtacaaatatcat 18772  T
Q  295 tgctc 299  Q
    |||||    
T  18773 tgctc 18777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 24763 - 24857
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    ||||||||||||||| ||||| |||||| | || |||| |||| || ||| |||| |||||| |||| |||| |||||||||||||  |||||||    
T  24763 ttttctctctccattgtttttaaccaataagaagagagaaaaataaggttgtcactaaaattatcatgaaatagatgtacaaatatcgttgctct 24857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 31592 - 31518
Alignment:
Q  195 tctctattcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgt 269  Q
    ||||| |||| ||||||||||||||| ||||| |||||| |||| |||| |||| |||||| |||| ||||||||    
T  31592 tctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 88893 - 88994
Alignment:
Q  201 ttcccttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatattattgctct 300  Q
    |||| ||||||||||||||| ||||| |||||| | || |||  |||| || ||| |||| ||| || |||| | |||||||||||||||| ||||||||    
T  88893 ttcctttttctctctccattgtttttgaccaataagaaaagaaaaaaataaggttgtcactaaagttatcatgagatggatgtacaaatatcattgctct 88992  T
Q  301 tt 302  Q
    ||    
T  88993 tt 88994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 3424 - 3545
Alignment:
Q  180 atgatgttattatcttctctattcccttttctctctccatt-attttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatg 278  Q
    |||||| | ||||| ||||| |||| |||||| |||||||| |||||| |||||| | || | || |||| || ||| |||| ||| ||||| | |||||    
T  3424 atgatggtcttatcctctctcttcctttttctttctccatttatttttgaccaataagaagaaagaaaaataaggttgtcactaaagttgtcgtgaaatg 3523  T
Q  279 gatgtacaaatattattgctct 300  Q
     |||||||||||| ||||||||    
T  3524 aatgtacaaatatcattgctct 3545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 72152 - 72067
Alignment:
Q  206 ttttctctctccattattttttaccaatcaaaatagaggaaaacaaagttatcaccaaaattgtcattaaatggatgtacaaatat 291  Q
    |||||||| |||||||||||| |||||| | ||| ||| ||| ||| ||| |||||||| ||||||  | || |||||||||||||    
T  72152 ttttctctttccattatttttaaccaataagaattgagaaaaccaaggttgtcaccaaagttgtcaccatatagatgtacaaatat 72067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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