View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6277_high_76 (Length: 248)
Name: NF6277_high_76
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6277_high_76 |
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Alignment Details
Target: chr4 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 33511957 - 33512171
Alignment:
| Q |
1 |
acgcggacatatgcattagcctttaatgttgcaagtcattgcgtctaatgttgggacttgatcgagggatataattgaattaaattgagagagaaatatg |
100 |
Q |
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| T |
33511957 |
acgcggacgtatgcattagcctttaatgttgcaagtcattgcgtctaatgttgggacttgatcgagggatataattgaattaaattgagagagaaatatg |
33512056 |
T |
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| Q |
101 |
gannnnnnnaaaaacttcaaaggcaaaagttgtcgaatccatgtaaattcaaggagaaaatggcttattcattaaataaaagcaacaattatatgtatcc |
200 |
Q |
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| T |
33512057 |
gattttttaaaaaacttcaaaggcaaaagttgtcgaatccatgtaaattcaagaagaaaatggcttattcattaaataaaagtaacaattatatgtatgt |
33512156 |
T |
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| Q |
201 |
ctctacatgacatca |
215 |
Q |
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||||||||||||||| |
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| T |
33512157 |
ctctacatgacatca |
33512171 |
T |
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