View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6277_low_12 (Length: 517)

Name: NF6277_low_12
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6277_low_12
NF6277_low_12
[»] chr6 (59 HSPs)
chr6 (20-514)||(33323452-33323946)
chr6 (20-514)||(35136985-35137479)
chr6 (345-514)||(16889106-16889276)
chr6 (333-512)||(18383030-18383211)
chr6 (53-249)||(31627320-31627512)
chr6 (156-283)||(22847051-22847181)
chr6 (351-433)||(25368718-25368800)
chr6 (346-434)||(15738970-15739058)
chr6 (209-280)||(1554750-1554821)
chr6 (228-310)||(16888945-16889027)
chr6 (348-434)||(22866889-22866975)
chr6 (348-434)||(28196139-28196225)
chr6 (333-508)||(22846775-22846954)
chr6 (222-280)||(4989806-4989864)
chr6 (222-280)||(13622308-13622366)
chr6 (222-280)||(14627805-14627863)
chr6 (222-280)||(15736376-15736434)
chr6 (222-280)||(18824956-18825014)
chr6 (138-279)||(22363309-22363452)
chr6 (225-280)||(23976478-23976533)
chr6 (221-280)||(27655281-27655340)
chr6 (168-280)||(34965854-34965969)
chr6 (222-280)||(16230491-16230549)
chr6 (222-280)||(18004168-18004226)
chr6 (222-280)||(18843016-18843074)
chr6 (168-280)||(19853122-19853236)
chr6 (222-280)||(25174463-25174521)
chr6 (143-236)||(17790546-17790638)
chr6 (361-517)||(16084053-16084210)
chr6 (20-249)||(18582224-18582455)
chr6 (209-273)||(21776771-21776835)
chr6 (162-279)||(18382822-18382940)
chr6 (348-517)||(18775848-18776017)
chr6 (348-434)||(31627159-31627245)
chr6 (361-434)||(16105279-16105352)
chr6 (67-127)||(940218-940278)
chr6 (224-280)||(16827073-16827129)
chr6 (228-279)||(21622057-21622108)
chr6 (169-289)||(25918592-25918702)
chr6 (222-280)||(33315777-33315836)
chr6 (167-235)||(25650102-25650172)
chr6 (361-435)||(32897443-32897517)
chr6 (361-422)||(13622484-13622545)
chr6 (361-434)||(18431354-18431427)
chr6 (361-434)||(18569307-18569380)
chr6 (222-283)||(32277820-32277880)
chr6 (361-434)||(35017052-35017125)
chr6 (348-422)||(18004330-18004404)
chr6 (361-422)||(15736551-15736612)
chr6 (345-426)||(34965640-34965721)
chr6 (225-273)||(15736272-15736320)
chr6 (465-517)||(16105195-16105246)
chr6 (482-514)||(17790640-17790672)
chr6 (225-273)||(18004064-18004112)
chr6 (465-517)||(18128922-18128973)
chr6 (222-254)||(19609312-19609344)
chr6 (223-282)||(22594510-22594570)
chr6 (465-517)||(23151897-23151948)
chr6 (465-517)||(25745779-25745830)
[»] scaffold0058 (1 HSPs)
scaffold0058 (20-517)||(71311-71811)
[»] chr3 (87 HSPs)
chr3 (20-517)||(55441805-55442294)
chr3 (19-259)||(14079521-14079761)
chr3 (333-514)||(11330353-11330533)
chr3 (332-514)||(15874800-15874983)
chr3 (344-514)||(14060597-14060766)
chr3 (342-514)||(38812345-38812521)
chr3 (342-514)||(48420307-48420484)
chr3 (342-514)||(12490086-12490262)
chr3 (140-310)||(33369963-33370137)
chr3 (140-283)||(34558804-34558949)
chr3 (138-290)||(39654809-39654964)
chr3 (156-264)||(13327679-13327789)
chr3 (378-491)||(39654572-39654688)
chr3 (20-283)||(9591740-9592000)
chr3 (138-282)||(48420582-48420729)
chr3 (209-279)||(9303798-9303868)
chr3 (348-434)||(11198929-11199015)
chr3 (348-434)||(14294144-14294230)
chr3 (348-434)||(14299771-14299857)
chr3 (342-508)||(47983539-47983709)
chr3 (342-508)||(47992826-47992996)
chr3 (342-508)||(48002113-48002283)
chr3 (342-508)||(48011399-48011569)
chr3 (370-491)||(11883646-11883770)
chr3 (333-434)||(12951768-12951869)
chr3 (131-289)||(15516643-15516804)
chr3 (345-508)||(33370219-33370386)
chr3 (20-280)||(19945531-19945793)
chr3 (222-280)||(17957530-17957588)
chr3 (348-434)||(40938446-40938532)
chr3 (156-280)||(54652835-54652961)
chr3 (365-434)||(11062410-11062479)
chr3 (361-434)||(14522677-14522750)
chr3 (378-433)||(15516452-15516507)
chr3 (156-283)||(41660532-41660663)
chr3 (222-280)||(7852713-7852771)
chr3 (222-280)||(16819810-16819868)
chr3 (222-280)||(33340748-33340806)
chr3 (138-282)||(12489817-12489960)
chr3 (361-434)||(14297213-14297286)
chr3 (361-434)||(14302840-14302913)
chr3 (348-433)||(35122403-35122488)
chr3 (228-283)||(12951956-12952011)
chr3 (146-279)||(15549448-15549572)
chr3 (222-280)||(2450524-2450582)
chr3 (222-280)||(16259946-16260004)
chr3 (222-280)||(18909592-18909650)
chr3 (222-280)||(22273947-22274005)
chr3 (222-280)||(49231117-49231175)
chr3 (222-280)||(51159674-51159732)
chr3 (222-280)||(53769563-53769621)
chr3 (361-433)||(12562848-12562920)
chr3 (169-279)||(17203596-17203707)
chr3 (139-251)||(14522398-14522513)
chr3 (206-283)||(17937249-17937327)
chr3 (228-283)||(47983814-47983869)
chr3 (228-283)||(47993101-47993156)
chr3 (228-283)||(48002388-48002443)
chr3 (228-283)||(48011674-48011729)
chr3 (140-282)||(11883366-11883511)
chr3 (361-434)||(53899891-53899964)
chr3 (378-434)||(17138182-17138238)
chr3 (333-492)||(41660272-41660435)
chr3 (20-189)||(47785873-47786045)
chr3 (222-280)||(16745366-16745425)
chr3 (348-431)||(17523766-17523849)
chr3 (347-506)||(5229434-5229598)
chr3 (362-517)||(8630479-8630634)
chr3 (222-283)||(14284198-14284258)
chr3 (361-434)||(17099429-17099502)
chr3 (361-434)||(19230775-19230848)
chr3 (361-434)||(19572141-19572214)
chr3 (465-517)||(47786347-47786397)
chr3 (229-277)||(16260098-16260146)
chr3 (364-510)||(9592125-9592275)
chr3 (348-423)||(17913608-17913683)
chr3 (348-423)||(47786240-47786315)
chr3 (63-133)||(4163242-4163312)
chr3 (348-434)||(51159835-51159921)
chr3 (361-434)||(2048775-2048848)
chr3 (226-279)||(12020881-12020934)
chr3 (361-434)||(12351215-12351288)
chr3 (361-422)||(13816240-13816301)
chr3 (361-434)||(16259756-16259829)
chr3 (361-434)||(33340558-33340631)
chr3 (465-517)||(7852440-7852491)
chr3 (225-273)||(16819924-16819972)
[»] chr5 (72 HSPs)
chr5 (332-514)||(32967518-32967701)
chr5 (347-514)||(7727217-7727383)
chr5 (342-517)||(21615648-21615826)
chr5 (344-517)||(23492639-23492811)
chr5 (333-514)||(19860872-19861056)
chr5 (344-514)||(13793769-13793942)
chr5 (342-517)||(28888555-28888729)
chr5 (156-285)||(20833117-20833248)
chr5 (140-287)||(37982342-37982492)
chr5 (342-433)||(431149-431240)
chr5 (333-514)||(24226811-24226996)
chr5 (332-514)||(37189471-37189657)
chr5 (162-306)||(21615898-21616043)
chr5 (138-287)||(23492950-23493101)
chr5 (140-287)||(431340-431489)
chr5 (209-280)||(1169844-1169915)
chr5 (348-434)||(23453668-23453754)
chr5 (348-434)||(23465173-23465259)
chr5 (209-280)||(43445056-43445127)
chr5 (169-306)||(19861109-19861247)
chr5 (346-434)||(3672710-3672798)
chr5 (209-280)||(17473071-17473142)
chr5 (222-280)||(10779494-10779552)
chr5 (348-434)||(19404298-19404384)
chr5 (222-280)||(21074804-21074862)
chr5 (348-434)||(24184570-24184656)
chr5 (378-491)||(5452204-5452320)
chr5 (222-307)||(11341515-11341600)
chr5 (225-280)||(19498697-19498752)
chr5 (19-125)||(25004000-25004105)
chr5 (222-280)||(11254-11312)
chr5 (222-280)||(110297-110355)
chr5 (222-280)||(1221046-1221104)
chr5 (228-290)||(5452007-5452069)
chr5 (222-280)||(9731981-9732039)
chr5 (348-434)||(11338224-11338309)
chr5 (222-280)||(22367799-22367857)
chr5 (222-280)||(25425525-25425583)
chr5 (222-280)||(35792466-35792524)
chr5 (209-273)||(19498811-19498875)
chr5 (222-280)||(4201280-4201339)
chr5 (222-280)||(7424583-7424642)
chr5 (229-280)||(23513703-23513754)
chr5 (225-280)||(25901537-25901592)
chr5 (222-280)||(11582782-11582840)
chr5 (222-280)||(27185029-27185087)
chr5 (156-256)||(28901005-28901106)
chr5 (156-256)||(28937400-28937501)
chr5 (361-434)||(11582592-11582665)
chr5 (225-280)||(21234723-21234779)
chr5 (225-277)||(35792320-35792372)
chr5 (225-280)||(37051889-37051945)
chr5 (228-283)||(3672908-3672963)
chr5 (222-280)||(18779307-18779366)
chr5 (222-280)||(25901640-25901699)
chr5 (20-133)||(29913149-29913264)
chr5 (348-434)||(20710855-20710941)
chr5 (95-279)||(21223789-21223967)
chr5 (222-280)||(29191935-29191993)
chr5 (225-280)||(20615517-20615573)
chr5 (375-407)||(37982147-37982179)
chr5 (20-133)||(24083193-24083308)
chr5 (361-517)||(4863901-4864057)
chr5 (260-306)||(13794016-13794062)
chr5 (361-517)||(27185204-27185360)
chr5 (348-433)||(1170018-1170103)
chr5 (361-434)||(16535023-16535096)
chr5 (361-422)||(19498529-19498589)
chr5 (361-434)||(21392906-21392979)
chr5 (361-434)||(21652772-21652845)
chr5 (361-434)||(35792622-35792695)
chr5 (225-273)||(25425639-25425687)
[»] chr4 (68 HSPs)
chr4 (332-514)||(37958407-37958590)
chr4 (332-514)||(34197515-34197698)
chr4 (344-514)||(15852679-15852849)
chr4 (342-517)||(27959665-27959839)
chr4 (333-514)||(41167286-41167467)
chr4 (333-512)||(12245602-12245783)
chr4 (342-442)||(43282738-43282839)
chr4 (149-290)||(7187037-7187180)
chr4 (156-283)||(15014397-15014527)
chr4 (140-283)||(18275753-18275898)
chr4 (345-508)||(41257709-41257876)
chr4 (382-517)||(14900113-14900247)
chr4 (138-280)||(34394101-34394245)
chr4 (205-280)||(5684080-5684156)
chr4 (209-279)||(19019324-19019394)
chr4 (346-434)||(52266825-52266913)
chr4 (209-280)||(8373364-8373435)
chr4 (209-280)||(18294350-18294421)
chr4 (209-280)||(47356229-47356300)
chr4 (361-434)||(18495777-18495850)
chr4 (223-287)||(34197370-34197434)
chr4 (209-273)||(34393960-34394024)
chr4 (225-280)||(14995098-14995153)
chr4 (140-244)||(41257463-41257570)
chr4 (168-280)||(50221073-50221188)
chr4 (222-280)||(8373258-8373316)
chr4 (378-476)||(15043611-15043712)
chr4 (378-476)||(15110712-15110813)
chr4 (361-435)||(44054636-44054710)
chr4 (222-282)||(15212245-15212305)
chr4 (225-280)||(19999430-19999485)
chr4 (222-280)||(7133645-7133703)
chr4 (222-280)||(9294428-9294486)
chr4 (172-284)||(12245404-12245517)
chr4 (348-434)||(13810987-13811073)
chr4 (222-280)||(14950922-14950980)
chr4 (222-280)||(15273955-15274013)
chr4 (222-280)||(18167694-18167752)
chr4 (20-282)||(13810612-13810875)
chr4 (222-280)||(15288204-15288263)
chr4 (222-280)||(26678937-26678996)
chr4 (222-276)||(18110048-18110102)
chr4 (222-280)||(18247091-18247149)
chr4 (222-280)||(22355760-22355818)
chr4 (225-280)||(10487573-10487629)
chr4 (225-280)||(16329122-16329178)
chr4 (131-215)||(19822826-19822910)
chr4 (228-283)||(15043844-15043898)
chr4 (228-283)||(15110526-15110580)
chr4 (222-280)||(15295314-15295373)
chr4 (222-283)||(14502797-14502857)
chr4 (361-434)||(53706160-53706233)
chr4 (361-434)||(53909140-53909213)
chr4 (222-282)||(9794243-9794302)
chr4 (225-277)||(18109902-18109954)
chr4 (361-517)||(21960938-21961095)
chr4 (138-243)||(43282481-43282589)
chr4 (348-434)||(7133806-7133892)
chr4 (246-288)||(19822931-19822973)
chr4 (348-434)||(30233901-30233987)
chr4 (138-183)||(34197294-34197340)
chr4 (348-434)||(34393768-34393854)
chr4 (19-123)||(38763883-38763989)
chr4 (361-434)||(8873864-8873937)
chr4 (361-434)||(12901142-12901215)
chr4 (345-426)||(47469691-47469772)
chr4 (225-273)||(7133541-7133589)
chr4 (223-251)||(8873745-8873773)
[»] chr8 (74 HSPs)
chr8 (322-514)||(21199507-21199701)
chr8 (336-514)||(31195633-31195812)
chr8 (322-514)||(21192080-21192274)
chr8 (333-514)||(39448170-39448350)
chr8 (20-310)||(33612049-33612344)
chr8 (24-278)||(23227009-23227267)
chr8 (63-310)||(23148781-23149027)
chr8 (322-514)||(25756590-25756787)
chr8 (342-514)||(23835855-23836030)
chr8 (378-514)||(25294601-25294741)
chr8 (95-283)||(15932260-15932449)
chr8 (348-517)||(21696193-21696364)
chr8 (333-508)||(37654990-37655168)
chr8 (345-434)||(18768119-18768208)
chr8 (209-280)||(13663819-13663890)
chr8 (209-280)||(13723094-13723165)
chr8 (209-280)||(17151331-17151402)
chr8 (209-280)||(13722354-13722425)
chr8 (209-280)||(13722502-13722573)
chr8 (209-280)||(13722650-13722721)
chr8 (209-280)||(13722798-13722869)
chr8 (209-280)||(13722946-13723017)
chr8 (169-306)||(23836101-23836239)
chr8 (20-283)||(37654625-37654893)
chr8 (209-280)||(224344-224415)
chr8 (209-280)||(737967-738038)
chr8 (209-280)||(861862-861933)
chr8 (222-305)||(17151450-17151533)
chr8 (209-280)||(18618071-18618142)
chr8 (364-510)||(23148532-23148682)
chr8 (348-434)||(20568623-20568709)
chr8 (348-434)||(20574816-20574902)
chr8 (348-434)||(20655380-20655466)
chr8 (222-280)||(24107781-24107839)
chr8 (93-280)||(26010374-26010561)
chr8 (223-280)||(24718613-24718670)
chr8 (361-434)||(28543653-28543726)
chr8 (346-434)||(22737235-22737323)
chr8 (209-280)||(700757-700828)
chr8 (225-280)||(3432775-3432830)
chr8 (348-423)||(17730821-17730896)
chr8 (168-280)||(33171202-33171317)
chr8 (222-280)||(6775426-6775484)
chr8 (222-280)||(24930309-24930367)
chr8 (222-280)||(28836498-28836556)
chr8 (20-258)||(38636650-38636889)
chr8 (148-279)||(17284180-17284311)
chr8 (361-434)||(20648808-20648881)
chr8 (361-434)||(25121259-25121332)
chr8 (333-506)||(33170905-33171084)
chr8 (378-423)||(38532377-38532422)
chr8 (168-280)||(18042651-18042766)
chr8 (363-434)||(21679919-21679990)
chr8 (348-517)||(37610000-37610169)
chr8 (222-280)||(16040555-16040613)
chr8 (222-280)||(22908679-22908737)
chr8 (345-510)||(33612416-33612585)
chr8 (225-280)||(5237098-5237154)
chr8 (225-277)||(16040452-16040504)
chr8 (225-277)||(16042235-16042287)
chr8 (225-280)||(24662444-24662500)
chr8 (225-280)||(43684557-43684613)
chr8 (361-517)||(37605626-37605782)
chr8 (222-283)||(16040777-16040837)
chr8 (361-434)||(16416977-16417050)
chr8 (361-434)||(22908853-22908926)
chr8 (352-429)||(45560580-45560657)
chr8 (347-426)||(18042918-18042997)
chr8 (222-268)||(38532578-38532624)
chr8 (222-283)||(16042453-16042513)
chr8 (222-283)||(22885452-22885512)
chr8 (361-422)||(24718786-24718847)
chr8 (222-282)||(21696467-21696526)
chr8 (462-510)||(23153285-23153333)
[»] chr1 (43 HSPs)
chr1 (322-514)||(19601818-19602011)
chr1 (344-514)||(38034980-38035150)
chr1 (344-514)||(36357696-36357866)
chr1 (333-512)||(13378106-13378288)
chr1 (20-290)||(22144376-22144649)
chr1 (333-508)||(21193810-21193989)
chr1 (95-310)||(8539018-8539236)
chr1 (95-310)||(8604257-8604475)
chr1 (333-514)||(37235305-37235490)
chr1 (95-289)||(17607859-17608054)
chr1 (138-287)||(27673747-27673899)
chr1 (348-442)||(20956328-20956423)
chr1 (156-282)||(21194077-21194206)
chr1 (227-306)||(13377974-13378053)
chr1 (209-279)||(20253180-20253250)
chr1 (348-434)||(51657687-51657773)
chr1 (346-491)||(27673508-27673656)
chr1 (95-283)||(5471460-5471650)
chr1 (209-280)||(22353030-22353101)
chr1 (333-490)||(8539296-8539457)
chr1 (333-490)||(8604535-8604696)
chr1 (346-506)||(5471740-5471904)
chr1 (168-289)||(5769323-5769447)
chr1 (169-283)||(37235113-37235228)
chr1 (225-280)||(22365657-22365712)
chr1 (361-434)||(35523796-35523869)
chr1 (378-433)||(22836642-22836697)
chr1 (222-280)||(20826425-20826483)
chr1 (222-290)||(20956175-20956243)
chr1 (348-517)||(35053473-35053642)
chr1 (156-256)||(16655452-16655553)
chr1 (348-434)||(21716920-21717006)
chr1 (364-510)||(22144768-22144917)
chr1 (222-280)||(41393354-41393412)
chr1 (225-280)||(51451514-51451570)
chr1 (361-434)||(5675977-5676050)
chr1 (361-434)||(22407571-22407644)
chr1 (222-290)||(22836439-22836507)
chr1 (228-279)||(17022488-17022539)
chr1 (222-273)||(51657515-51657566)
chr1 (228-306)||(20176165-20176243)
chr1 (361-517)||(41218084-41218240)
chr1 (361-422)||(49966375-49966436)
[»] scaffold0507 (2 HSPs)
scaffold0507 (342-514)||(4709-4882)
scaffold0507 (78-281)||(4427-4630)
[»] chr2 (65 HSPs)
chr2 (345-517)||(19670499-19670672)
chr2 (344-514)||(23824821-23824991)
chr2 (344-514)||(23822877-23823047)
chr2 (344-514)||(23831956-23832126)
chr2 (322-514)||(19658585-19658779)
chr2 (342-514)||(4644-4815)
chr2 (344-514)||(24295941-24296111)
chr2 (153-310)||(19658837-19658995)
chr2 (333-512)||(25304206-25304388)
chr2 (378-514)||(24088766-24088900)
chr2 (333-514)||(19434813-19434998)
chr2 (138-282)||(66468-66615)
chr2 (96-280)||(25600866-25601053)
chr2 (153-290)||(22787151-22787290)
chr2 (345-510)||(22137182-22137350)
chr2 (96-289)||(24088436-24088630)
chr2 (228-290)||(19670338-19670400)
chr2 (172-280)||(24276810-24276920)
chr2 (333-514)||(43641462-43641647)
chr2 (347-434)||(7320204-7320291)
chr2 (149-281)||(19665582-19665716)
chr2 (348-434)||(24572749-24572835)
chr2 (345-434)||(721187-721276)
chr2 (222-280)||(21140779-21140837)
chr2 (222-280)||(21275722-21275780)
chr2 (348-434)||(22581291-22581377)
chr2 (352-429)||(22787399-22787476)
chr2 (222-307)||(34823075-34823160)
chr2 (348-434)||(269903-269989)
chr2 (222-280)||(12643220-12643278)
chr2 (222-280)||(12727063-12727121)
chr2 (361-431)||(22691321-22691391)
chr2 (361-431)||(22695968-22696038)
chr2 (222-280)||(24827764-24827822)
chr2 (222-307)||(12726930-12727015)
chr2 (225-280)||(8942552-8942607)
chr2 (228-279)||(9782117-9782168)
chr2 (225-280)||(12637363-12637418)
chr2 (348-434)||(4449587-4449673)
chr2 (222-280)||(19887975-19888033)
chr2 (348-434)||(25600677-25600763)
chr2 (361-434)||(27260299-27260372)
chr2 (222-290)||(721378-721446)
chr2 (225-280)||(14907636-14907692)
chr2 (225-280)||(23819082-23819138)
chr2 (224-280)||(24967203-24967259)
chr2 (342-401)||(66283-66342)
chr2 (222-280)||(3800201-3800260)
chr2 (222-280)||(3800308-3800367)
chr2 (347-508)||(18534471-18534636)
chr2 (345-506)||(24276530-24276695)
chr2 (348-434)||(36892067-36892153)
chr2 (217-282)||(7320393-7320458)
chr2 (361-434)||(22273601-22273674)
chr2 (381-434)||(28972757-28972810)
chr2 (348-517)||(6878075-6878244)
chr2 (361-517)||(8886773-8886929)
chr2 (361-422)||(24827938-24827998)
chr2 (361-422)||(24967025-24967086)
chr2 (361-434)||(43644346-43644419)
chr2 (225-280)||(20014025-20014078)
chr2 (222-282)||(22581129-22581188)
chr2 (465-517)||(22862120-22862171)
chr2 (465-517)||(25600593-25600644)
chr2 (465-517)||(27260215-27260266)
[»] scaffold0022 (4 HSPs)
scaffold0022 (333-514)||(106269-106449)
scaffold0022 (168-280)||(130809-130923)
scaffold0022 (348-491)||(108308-108454)
scaffold0022 (345-492)||(130546-130697)
[»] scaffold0327 (1 HSPs)
scaffold0327 (345-513)||(4667-4836)
[»] scaffold0095 (1 HSPs)
scaffold0095 (333-514)||(7013-7193)
[»] scaffold0028 (4 HSPs)
scaffold0028 (345-512)||(78319-78487)
scaffold0028 (165-310)||(78567-78712)
scaffold0028 (222-280)||(90081-90139)
scaffold0028 (225-280)||(129290-129345)
[»] scaffold0138 (5 HSPs)
scaffold0138 (352-514)||(23792-23955)
scaffold0138 (209-273)||(28412-28476)
scaffold0138 (209-273)||(40408-40472)
scaffold0138 (222-280)||(28553-28611)
scaffold0138 (222-280)||(40549-40607)
[»] scaffold0786 (4 HSPs)
scaffold0786 (20-283)||(604-870)
scaffold0786 (20-283)||(5659-5925)
scaffold0786 (345-510)||(330-498)
scaffold0786 (345-510)||(5385-5553)
[»] scaffold0390 (2 HSPs)
scaffold0390 (20-283)||(4192-4458)
scaffold0390 (345-510)||(3918-4086)
[»] scaffold0175 (1 HSPs)
scaffold0175 (34-287)||(6142-6399)
[»] scaffold0243 (2 HSPs)
scaffold0243 (342-514)||(3648-3824)
scaffold0243 (138-287)||(3405-3556)
[»] chr7 (63 HSPs)
chr7 (342-514)||(13388603-13388778)
chr7 (360-514)||(15913812-15913961)
chr7 (333-514)||(13376309-13376489)
chr7 (333-514)||(9057976-9058161)
chr7 (95-287)||(9057708-9057901)
chr7 (138-283)||(9610179-9610326)
chr7 (138-283)||(9837751-9837898)
chr7 (140-283)||(48354278-48354423)
chr7 (348-517)||(12753516-12753685)
chr7 (20-290)||(10861839-10862110)
chr7 (95-280)||(16920990-16921176)
chr7 (348-434)||(11285929-11286015)
chr7 (348-434)||(12249473-12249559)
chr7 (348-430)||(13273465-13273547)
chr7 (168-280)||(9322173-9322288)
chr7 (209-280)||(15761554-15761625)
chr7 (222-280)||(15952294-15952352)
chr7 (228-309)||(13376543-13376624)
chr7 (168-283)||(20584012-20584129)
chr7 (222-277)||(2027468-2027523)
chr7 (222-280)||(2191894-2191952)
chr7 (348-434)||(15629489-15629575)
chr7 (222-280)||(16480134-16480192)
chr7 (345-492)||(9322418-9322571)
chr7 (378-433)||(10862245-10862300)
chr7 (222-280)||(13912311-13912370)
chr7 (232-279)||(17225126-17225173)
chr7 (222-280)||(7291761-7291819)
chr7 (222-280)||(11515135-11515193)
chr7 (222-280)||(16417372-16417430)
chr7 (222-280)||(26010389-26010447)
chr7 (222-280)||(32495753-32495811)
chr7 (361-517)||(45453629-45453787)
chr7 (360-434)||(49049173-49049247)
chr7 (225-280)||(15442760-15442816)
chr7 (225-280)||(30263325-30263381)
chr7 (222-280)||(11515028-11515087)
chr7 (348-434)||(142345-142431)
chr7 (348-422)||(15823770-15823844)
chr7 (348-517)||(26071625-26071795)
chr7 (348-517)||(26095412-26095582)
chr7 (361-517)||(1938144-1938299)
chr7 (361-434)||(2192069-2192142)
chr7 (361-434)||(7291571-7291644)
chr7 (348-434)||(16571450-16571538)
chr7 (348-434)||(16594124-16594212)
chr7 (225-277)||(2191748-2191800)
chr7 (222-282)||(13273659-13273719)
chr7 (228-279)||(16918507-16918558)
chr7 (223-282)||(49048991-49049050)
chr7 (225-283)||(3048630-3048687)
chr7 (20-258)||(14939745-14939984)
chr7 (20-258)||(15367338-15367577)
chr7 (222-280)||(15926272-15926330)
chr7 (348-434)||(47288493-47288579)
chr7 (361-434)||(112670-112743)
chr7 (361-434)||(369605-369678)
chr7 (348-433)||(2027276-2027361)
chr7 (361-434)||(13867447-13867520)
chr7 (361-434)||(32495928-32496001)
chr7 (465-517)||(3893730-3893781)
chr7 (19-127)||(13273814-13273922)
chr7 (20-132)||(49048788-49048900)
[»] scaffold0456 (3 HSPs)
scaffold0456 (139-283)||(12051-12196)
scaffold0456 (20-281)||(13092-13355)
scaffold0456 (342-407)||(12940-13005)
[»] scaffold0016 (2 HSPs)
scaffold0016 (342-514)||(117958-118134)
scaffold0016 (137-306)||(117716-117886)
[»] scaffold0013 (2 HSPs)
scaffold0013 (333-514)||(34108-34292)
scaffold0013 (162-306)||(34345-34490)
[»] scaffold0503 (1 HSPs)
scaffold0503 (156-283)||(10514-10642)
[»] scaffold0031 (4 HSPs)
scaffold0031 (53-249)||(69644-69836)
scaffold0031 (162-287)||(98294-98420)
scaffold0031 (348-434)||(30793-30879)
scaffold0031 (348-517)||(69399-69569)
[»] scaffold0151 (1 HSPs)
scaffold0151 (156-289)||(23592-23727)
[»] scaffold0010 (1 HSPs)
scaffold0010 (138-287)||(30028-30179)
[»] scaffold0053 (2 HSPs)
scaffold0053 (332-514)||(78176-78362)
scaffold0053 (228-289)||(78036-78097)
[»] scaffold0080 (2 HSPs)
scaffold0080 (343-508)||(24966-25135)
scaffold0080 (156-283)||(24729-24859)
[»] scaffold0025 (3 HSPs)
scaffold0025 (95-283)||(84498-84689)
scaffold0025 (209-280)||(145435-145506)
scaffold0025 (228-256)||(52244-52272)
[»] scaffold0009 (2 HSPs)
scaffold0009 (138-282)||(68429-68575)
scaffold0009 (348-517)||(236815-236984)
[»] scaffold0195 (4 HSPs)
scaffold0195 (348-434)||(8012-8098)
scaffold0195 (348-434)||(13401-13487)
scaffold0195 (361-517)||(17941-18097)
scaffold0195 (361-434)||(20108-20181)
[»] scaffold0150 (4 HSPs)
scaffold0150 (348-491)||(20356-20502)
scaffold0150 (348-491)||(27185-27331)
scaffold0150 (20-268)||(20628-20879)
scaffold0150 (20-268)||(27457-27708)
[»] scaffold0116 (2 HSPs)
scaffold0116 (209-280)||(28790-28861)
scaffold0116 (361-434)||(28602-28674)
[»] scaffold0032 (3 HSPs)
scaffold0032 (131-290)||(105702-105864)
scaffold0032 (226-280)||(109282-109336)
scaffold0032 (361-434)||(54354-54427)
[»] scaffold0006 (1 HSPs)
scaffold0006 (138-283)||(198466-198614)
[»] scaffold0610 (1 HSPs)
scaffold0610 (348-517)||(1984-2154)
[»] scaffold0193 (2 HSPs)
scaffold0193 (138-283)||(3620-3762)
scaffold0193 (333-416)||(3450-3533)
[»] scaffold0004 (4 HSPs)
scaffold0004 (168-283)||(85328-85446)
scaffold0004 (140-278)||(26482-26626)
scaffold0004 (345-492)||(85079-85230)
scaffold0004 (345-506)||(26203-26368)
[»] scaffold0090 (1 HSPs)
scaffold0090 (346-491)||(6003-6151)
[»] scaffold0521 (2 HSPs)
scaffold0521 (333-476)||(7270-7416)
scaffold0521 (228-306)||(7469-7547)
[»] scaffold0044 (1 HSPs)
scaffold0044 (209-280)||(95227-95298)
[»] scaffold0589 (1 HSPs)
scaffold0589 (348-434)||(6600-6686)
[»] scaffold0190 (2 HSPs)
scaffold0190 (348-517)||(8712-8882)
scaffold0190 (20-243)||(8963-9185)
[»] scaffold0346 (2 HSPs)
scaffold0346 (141-244)||(13777-13882)
scaffold0346 (382-508)||(14005-14135)
[»] scaffold0021 (2 HSPs)
scaffold0021 (361-434)||(10382-10455)
scaffold0021 (465-517)||(138287-138338)
[»] scaffold1734 (1 HSPs)
scaffold1734 (209-273)||(104-168)
[»] scaffold0383 (3 HSPs)
scaffold0383 (209-280)||(1270-1340)
scaffold0383 (348-517)||(5867-6036)
scaffold0383 (361-434)||(1081-1154)
[»] scaffold0310 (1 HSPs)
scaffold0310 (20-280)||(1256-1522)
[»] scaffold0750 (1 HSPs)
scaffold0750 (348-434)||(6694-6780)
[»] scaffold0092 (1 HSPs)
scaffold0092 (376-434)||(2136-2194)
[»] scaffold0434 (2 HSPs)
scaffold0434 (348-433)||(3378-3463)
scaffold0434 (465-517)||(3293-3344)
[»] scaffold0103 (2 HSPs)
scaffold0103 (361-434)||(32300-32373)
scaffold0103 (223-290)||(32480-32547)
[»] scaffold0808 (1 HSPs)
scaffold0808 (378-434)||(2856-2912)
[»] scaffold0066 (1 HSPs)
scaffold0066 (209-276)||(53215-53283)
[»] scaffold0234 (1 HSPs)
scaffold0234 (209-280)||(18763-18834)
[»] scaffold0597 (2 HSPs)
scaffold0597 (222-280)||(2329-2387)
scaffold0597 (348-434)||(2490-2576)
[»] scaffold0251 (2 HSPs)
scaffold0251 (222-280)||(15061-15119)
scaffold0251 (361-434)||(15234-15306)
[»] scaffold0124 (2 HSPs)
scaffold0124 (222-280)||(2773-2831)
scaffold0124 (348-434)||(23057-23143)
[»] scaffold0023 (1 HSPs)
scaffold0023 (222-280)||(155552-155610)
[»] scaffold0462 (2 HSPs)
scaffold0462 (361-434)||(4847-4920)
scaffold0462 (465-517)||(4763-4814)
[»] scaffold0342 (2 HSPs)
scaffold0342 (95-290)||(4738-4933)
scaffold0342 (349-434)||(4559-4644)
[»] scaffold0001 (1 HSPs)
scaffold0001 (361-434)||(71823-71896)
[»] scaffold0026 (2 HSPs)
scaffold0026 (223-287)||(91043-91107)
scaffold0026 (138-186)||(90764-90813)
[»] scaffold1753 (2 HSPs)
scaffold1753 (225-276)||(371-422)
scaffold1753 (348-434)||(178-264)
[»] scaffold0447 (1 HSPs)
scaffold0447 (348-517)||(3259-3428)
[»] scaffold0014 (1 HSPs)
scaffold0014 (348-432)||(145648-145734)
[»] scaffold0315 (1 HSPs)
scaffold0315 (222-280)||(17554-17612)
[»] scaffold0132 (1 HSPs)
scaffold0132 (222-280)||(41613-41671)
[»] scaffold0078 (3 HSPs)
scaffold0078 (222-280)||(38528-38586)
scaffold0078 (361-434)||(38703-38776)
scaffold0078 (361-434)||(40208-40281)
[»] scaffold0051 (2 HSPs)
scaffold0051 (223-281)||(59478-59536)
scaffold0051 (469-517)||(56573-56620)
[»] scaffold0003 (1 HSPs)
scaffold0003 (222-280)||(6084-6142)
[»] scaffold0338 (1 HSPs)
scaffold0338 (361-434)||(7510-7583)
[»] scaffold0141 (2 HSPs)
scaffold0141 (225-280)||(25806-25862)
scaffold0141 (225-280)||(21551-21607)
[»] scaffold0107 (1 HSPs)
scaffold0107 (236-283)||(12374-12421)
[»] scaffold0047 (1 HSPs)
scaffold0047 (138-219)||(1208-1291)
[»] scaffold0034 (3 HSPs)
scaffold0034 (225-280)||(78458-78513)
scaffold0034 (361-434)||(38928-39001)
scaffold0034 (361-434)||(44515-44588)
[»] scaffold0761 (1 HSPs)
scaffold0761 (222-280)||(2888-2946)
[»] scaffold0240 (1 HSPs)
scaffold0240 (348-434)||(6264-6350)
[»] scaffold0083 (2 HSPs)
scaffold0083 (348-434)||(12915-13001)
scaffold0083 (223-251)||(13134-13162)
[»] scaffold0207 (1 HSPs)
scaffold0207 (222-283)||(16838-16898)
[»] scaffold0118 (1 HSPs)
scaffold0118 (222-283)||(35448-35508)
[»] scaffold0018 (2 HSPs)
scaffold0018 (361-434)||(52646-52719)
scaffold0018 (361-434)||(56598-56671)
[»] scaffold1164 (1 HSPs)
scaffold1164 (95-186)||(135-227)
[»] scaffold0037 (1 HSPs)
scaffold0037 (465-517)||(70874-70925)
[»] scaffold0483 (1 HSPs)
scaffold0483 (232-279)||(5653-5700)
[»] scaffold0158 (1 HSPs)
scaffold0158 (209-248)||(23863-23902)
[»] scaffold0692 (1 HSPs)
scaffold0692 (360-434)||(765-839)
[»] scaffold0396 (2 HSPs)
scaffold0396 (352-434)||(13557-13639)
scaffold0396 (465-517)||(13671-13722)
[»] scaffold0395 (1 HSPs)
scaffold0395 (360-422)||(14408-14470)
[»] scaffold0213 (1 HSPs)
scaffold0213 (348-434)||(27738-27824)
[»] scaffold0008 (1 HSPs)
scaffold0008 (361-399)||(21411-21449)
[»] scaffold0622 (1 HSPs)
scaffold0622 (361-434)||(8150-8223)
[»] scaffold0357 (1 HSPs)
scaffold0357 (20-127)||(6828-6937)
[»] scaffold0269 (4 HSPs)
scaffold0269 (361-434)||(795-868)
scaffold0269 (361-434)||(15051-15124)
scaffold0269 (222-254)||(897-929)
scaffold0269 (222-254)||(15153-15185)
[»] scaffold0266 (1 HSPs)
scaffold0266 (361-434)||(4970-5043)
[»] scaffold0184 (2 HSPs)
scaffold0184 (361-434)||(32563-32636)
scaffold0184 (361-434)||(34068-34141)
[»] scaffold0120 (1 HSPs)
scaffold0120 (465-517)||(27208-27259)
[»] scaffold0068 (2 HSPs)
scaffold0068 (223-251)||(47061-47089)
scaffold0068 (223-251)||(60509-60537)
[»] scaffold0012 (1 HSPs)
scaffold0012 (465-517)||(249016-249067)


Alignment Details
Target: chr6 (Bit Score: 364; Significance: 0; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 20 - 514
Target Start/End: Complemental strand, 33323946 - 33323452
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgcta 118  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||    
T  33323946 cttaagcttatgattacatgattgattaggattatcttgtgagcttcaaacttgaacaagttattttatcttgggtataataaatgttagccgattgcta 33323847  T
Q  119 cttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg 218  Q
    ||||||||  ||||  ||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33323846 cttgatacaaatttc-accaaaaatgattcttttagccaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg 33323748  T
Q  219 tagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgatgtacggaatgt 318  Q
    ||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||| |||||||    
T  33323747 tagatgtggaatatgatacttatcttgagatgttgtatttcctcttacttggaatatgagaaatatttgaaacggtgaaactatatgatgtatggaatgt 33323648  T
Q  319 agtctcttaattgtttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttat 418  Q
     | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33323647 tgactcttaattgtttatgaccggaatgttgtatggacgtaatttcttgataatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttat 33323548  T
Q  419 attgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  33323547 attgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcatcatagtcatgttgagttttgcaattgtaaaagggttga 33323452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 20 - 514
Target Start/End: Original strand, 35136985 - 35137479
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgcta 118  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  35136985 cttaagcttatgattacatgattgattaggtttatcttgtgagcttcaaacttgaacaatttattttatcttgggtattatcaatgttagccagttgcta 35137084  T
Q  119 cttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg 218  Q
    ||||||||  ||||  ||   ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35137085 cttgatacaaatttc-accaaaaatgattcttttagccaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg 35137183  T
Q  219 tagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgatgtacggaatgt 318  Q
    ||||||||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| ||||||  |||| | ||||||||||| |||||||    
T  35137184 tagatgttgaatatgatacttatcctgagatgttgtattttctcttacttggaatatgagaaatatttgaaatggtgaaactatatgatgtatggaatgt 35137283  T
Q  319 agtctcttaattgtttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttat 418  Q
     | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35137284 tgactcttaattgtttatgaccggaatgttgtatggacgtaatttcttgataatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttat 35137383  T
Q  419 attgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  35137384 attgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcatcatagtcatgttgagttttgcagttgtaaaagggttga 35137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 345 - 514
Target Start/End: Original strand, 16889106 - 16889276
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattg 444  Q
    |||||| |||| |||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||    
T  16889106 tgttgtgtggatgtaatttcttgataatgcaaatgatgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaatttggagatgattg 16889205  T
Q  445 cattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||| || ||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  16889206 cattgttaagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 16889276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 333 - 512
Target Start/End: Original strand, 18383030 - 18383211
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||| | |||| |||||| ||||| ||||| | ||||| ||||||||||||||| |||||||| |||||||| ||||||||||||  |    
T  18383030 ttatgacttgaatgttatgtggatgtaattacttgataatgcaattgttgaggagatgatcaatat-tttggaagttgtcctttgtattgttgtgaatgt 18383128  T
Q  433 t-ggaggtgatt-gcattattgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggtt 512  Q
    | |||||||||| ||||| ||||||||||||| ||||||||| |||| ||| ||||||||||| |||||||||||||||||||    
T  18383129 ttggaggtgatttgcattgttgagtccttacttgtatgtccaagcatcatagtcatgttgagtcttgtagttgtaaaagggtt 18383211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 53 - 249
Target Start/End: Complemental strand, 31627512 - 31627320
Alignment:
Q  53 tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttt 152  Q
    |||||||| ||||||| ||||  ||||||||| ||||||| | |||||||||||||||||||||||||||||||  || |  |||  |||||||||||||    
T  31627512 tcttgtgaacttcaaatttgataaagttattt-atcttgggtgttatcaatgttagccggttgctacttgatacaaatctc-actaaaaatgattctttt 31627415  T
Q  153 agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgtagatgttggatatgatatttatcatgagat 249  Q
    || ||||||||| | |||| || |||||||||||||  | ||||||||||||||| |||||||  |||||| ||| ||||||||||| |||| ||||    
T  31627414 agccaattgtctaa-aatcctt-gtgactagccttaattatctaaatgaaggtgtatgatgaaccgtagatattgaatatgatatttgtcattagat 31627320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 22847181 - 22847051
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| ||||||||||||||  ||||| || |||||||||| ||| ||| |||||||| | ||||||||||||||||||||||| || |||||    
T  22847181 caattatcttatgatctttcgtgactaaacttatatgactaaatgaagatgtttgaatgaattgttatatgttggatatgatatttatcataagttgttg 22847082  T
Q  254 tatttcctc-ttacttggaatatgagaaata 283  Q
    ||||| ||| |||||| ||||||||||||||    
T  22847081 tattttctctttactttgaatatgagaaata 22847051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 351 - 433
Target Start/End: Original strand, 25368718 - 25368800
Alignment:
Q  351 atggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    |||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  25368718 atggacgtgatttcttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaatt 25368800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 434
Target Start/End: Complemental strand, 15739058 - 15738970
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||| ||||||||||||||||  ||||| | |||||||||||||||||||||||||||||| |||||| |||||||| || |||||||    
T  15739058 gttgtgtggacgtaatttcttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtaaaaattg 15738970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 1554821 - 1554750
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||| | || ||||||||||||||||||||||    
T  1554821 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttattttccctcttacttggaatatgagaa 1554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 16888945 - 16889027
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgatgta 310  Q
    ||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||   |||| | |||||||||||    
T  16888945 gatatgataattatcatgagatgttgtattttctcttacttgaaatatgagaaataattgaattggtgaaactatatgatgta 16889027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 22866975 - 22866889
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||    
T  22866975 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatttatttggaagttgtcctctatattgtggtgaaaattg 22866889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 28196139 - 28196225
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| | ||||||||| ||||| | || ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  28196139 tgtatggacatgatttcttgataatgcaattggtgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 28196225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 22846954 - 22846775
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||| | | |||||||||||| ||||||||||||||||| | |||||||||| |||||||| ||    
T  22846954 ttatgacttgaatgttgtgtggacgtaaatacttgataattcaattgttgtggagataatcaatatatttggaagttatcctttatatcgttgtgaagat 22846855  T
Q  433 t-ggaggtg--attgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    |  ||||||   |||| || | ||||| || | ||||||||| ||||| ||| ||||||||||| |||||| ||||||||    
T  22846854 tatgaggtggttttgccttgtcgagtctttgcttgtatgtccttgcataatagtcatgttgagtcttgtagctgtaaaag 22846775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 4989864 - 4989806
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  4989864 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 4989806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 13622308 - 13622366
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  13622308 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 13622366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 14627805 - 14627863
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  14627805 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 14627863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 15736376 - 15736434
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  15736376 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 15736434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 18824956 - 18825014
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  18824956 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 18825014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 22363309 - 22363452
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    ||||||||||| |||| || |||| | |||| |||||| ||||||||| | || || |||||||||| ||| ||| |||||||| | |||||| ||||||    
T  22363309 ggaaatgattcctttaagttaattatattatgatcttttgtgactagcttcatatgactaaatgaagatgtatgaatgaattgtgatatgttg-atatga 22363407  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    || ||||||| ||||||||||| | ||||||||||||||||||||    
T  22363408 tacttatcataagatgttgtatgttctcttacttggaatatgaga 22363452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 23976533 - 23976478
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  23976533 ttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 23976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 27655281 - 27655340
Alignment:
Q  221 gatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  27655281 gatgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 27655340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 34965969 - 34965854
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctc-tt 264  Q
    ||||||||||||||||| |||| ||  ||||||||| | ||| | |||||||| |||||||| |||||||||||||||| || |||| ||||| ||| ||    
T  34965969 aatctttcgtgactagctttatatgattaaatgaagatatgtaaatgaattgttagatgttgaatatgatatttatcataaggtgttttattttctcttt 34965870  T
Q  265 acttggaatatgagaa 280  Q
    ||||||||||||||||    
T  34965869 acttggaatatgagaa 34965854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 16230549 - 16230491
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  16230549 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 16230491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 18004168 - 18004226
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||    
T  18004168 atgttggatatgatatttgtcatgagattttgtatgttctcttacttggaatatgagaa 18004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 18843016 - 18843074
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  18843016 atgttggatatgatatttgtcatgatatgttgtatgttctcttacttggaatatgagaa 18843074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 19853236 - 19853122
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtaga-tgttggatatgatatttatcatgagatgttgtatttcctctta 265  Q
    |||| ||||||||| || ||||  | |||||||||| ||||||| ||||||||  | ||||||||||||||||||||||  | |||||||||| ||||||    
T  19853236 aatccttcgtgacttgctttataagactaaatgaagatgtgtgaatgaattgttaagtgttggatatgatatttatcatagggtgttgtattttctctta 19853137  T
Q  266 cttggaatatgagaa 280  Q
    |||| ||||||||||    
T  19853136 cttgaaatatgagaa 19853122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 25174521 - 25174463
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  25174521 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 25174463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 17790546 - 17790638
Alignment:
Q  143 tgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgtagatgttggatatgata 236  Q
    |||||||||||| ||| || || ||||||||||||||| |   |  |||| |||||||||| ||||||||||||||||||||||||||||||||    
T  17790546 tgattcttttagccaagtgcct-ataatctttcgtgaccaaattcgtgtggctaaatgaagatgtgtgatgaattgtagatgttggatatgata 17790638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 517
Target Start/End: Complemental strand, 16084210 - 16084053
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtgatt--gcattattgagtcc 457  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||| || |||||| |||||||| | |||||||| ||  || ||  ||||||| |||| |    
T  16084210 tttcttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgtggagaaaattgtgaattgttttcgcattatcgagt-c 16084112  T
Q  458 ttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  16084111 ttgttacatgtccatgcatcatagtcttgttgag-attgtagttgtaaaagggttgaact 16084053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 249
Target Start/End: Complemental strand, 18582455 - 18582224
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctac 119  Q
    |||||||| |||| |||| ||||||||| ||||  ||| ||||||  ||||||   |||||  ||| ||||||  |||||||||||| |||| |||| ||    
T  18582455 cttaagctcatgactacaagattgattaagattgtttgagagctttcaacttgtctaagttgctttgtcttgggaattatcaatgttggccgtttgccac 18582356  T
Q  120 ttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaatt 217  Q
    |||||| |  ||||  | ||||| | ||||||| |  ||||| |||||| |||| ||||||||| |||||| || |||| ||||| ||||||| |||||     
T  18582355 ttgatatggtttttgtc-ggaaaagtttcttttgaaccaattttcttatgatctatcgtgactatccttatatgactaagtgaagatgtgtgaatgaatg 18582257  T
Q  218 gt-agatgttggatatgatatttatcatgagat 249  Q
    || | |||||||||||||| |||||||||||||    
T  18582256 gttatatgttggatatgatgtttatcatgagat 18582224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 21776771 - 21776835
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |  |||||||| ||||    
T  21776771 tgatgaattgtagatgttgaatatgatgtttatcatgagatgttgtatgttatcttacttagaat 21776835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 279
Target Start/End: Original strand, 18382822 - 18382940
Alignment:
Q  162 tcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtag-atgttggatatgatatttatcatgagatgttgtatttc 259  Q
    |||||| | ||||||||||||||| ||| || |||||||||| ||||||| ||| |||| | |||||| |||||||||||||||| |||||||  || |     
T  18382822 tcttatgacctttcgtgactagccgtatatgactaaatgaagatgtgtgaatgacttgttgtatgttg-atatgatatttatcataagatgttacatgtt 18382920  T
Q  260 ctcttacttggaatatgaga 279  Q
    |||||||||||| |||||||    
T  18382921 ctcttacttggactatgaga 18382940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 18776017 - 18775848
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  | ||    
T  18776017 tgtatggacatgttttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtgattgttgtcgc 18775918  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||| |||  |  |||||||||||||||| |  |||||||  ||||||||||||||||||||||||    
T  18775917 attatcgagt-cttgttacatgtccatgcattatagttgtgttgag-attgtagttgtaaaagggttgaact 18775848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 31627245 - 31627159
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| ||||    |||||| |||||||| ||||||||||    
T  31627245 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatataattggggattgtcctatatattgtggtgaaaattg 31627159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 16105352 - 16105279
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||| || |||||| |||||||| | ||||||||    
T  16105352 tttcttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgtggagaaaattg 16105279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 127
Target Start/End: Original strand, 940218 - 940278
Alignment:
Q  67 aacttgaacaagttattttatcttggttattatcaatgttagccggttgctacttgatacg 127  Q
    |||||||||| |||| ||||| ||||  |||||||||||||||||||||| ||||||||||    
T  940218 aacttgaacatgttactttattttgggaattatcaatgttagccggttgccacttgatacg 940278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 280
Target Start/End: Original strand, 16827073 - 16827129
Alignment:
Q  224 gttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||| |||||||||||||||||||||||||| || ||| ||||||| ||||||||||    
T  16827073 gttgaatatgatatttatcatgagatgttgttttccctattacttgaaatatgagaa 16827129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 21622108 - 21622057
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||||||| ||||||||||| | |||||||||||| |||||||    
T  21622108 gatatgatatttatcataagatgttgtatgttctcttacttggattatgaga 21622057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 289
Target Start/End: Complemental strand, 25918702 - 25918592
Alignment:
Q  169 atctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttactt 268  Q
    ||||||| |||||||||||||||| |||||||||| | |||||||      |||||||||   ||||| ||||||| ||||||||||| | |||| | ||    
T  25918702 atctttcttgactagccttatgtgactaaatgaagatatgtgatg------agatgttgg---tgata-ttatcataagatgttgtatgttctctaaatt 25918613  T
Q  269 ggaatatgagaaataattgaa 289  Q
    ||||||||||||||| |||||    
T  25918612 ggaatatgagaaatatttgaa 25918592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 33315777 - 33315836
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||| | ||| ||| ||||||||||||||||||    
T  33315777 atgttgaatatgatatttatcatgagatgttttttttccctattacttggaatatgagaa 33315836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 25650172 - 25650102
Alignment:
Q  167 taatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgat 235  Q
    |||||||| |||| ||||||||| || |||||||||| ||||||| |||||||| ||||||||||||||||    
T  25650172 taatcttttgtgaatagccttatatgactaaatgaagatgtgtgaatgaattgttagatgttggatatgat 25650102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 32897517 - 32897443
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattgg 435  Q
    |||||||| ||||  |||||||||||||||||||||| | |||  || |||||| |||||||| |||||||||||    
T  32897517 tttcttgataatgtaaatgttgtggagatgatcaataaaattgagagttgtcctatatattgtggtgaaaattgg 32897443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 13622484 - 13622545
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||| || |||||| |||||||    
T  13622484 tttcttgataatgcaaatgttgtggagataatcaatataattgggagttgtcctatatattg 13622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 18431427 - 18431354
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  18431427 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 18431354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 18569380 - 18569307
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  18569380 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 18569307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 32277820 - 32277880
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  32277820 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 32277880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 35017052 - 35017125
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  35017052 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 35017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 18004330 - 18004404
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||    
T  18004330 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 18004404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 15736551 - 15736612
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||    
T  15736551 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattg 15736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 426
Target Start/End: Complemental strand, 34965721 - 34965640
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgt 426  Q
    |||||| || |||||| | ||||| ||||| | |||||| ||| ||||||||||| ||||| | | ||||||||||||||||    
T  34965721 tgttgtgtgaacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgt 34965640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 15736272 - 15736320
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||| |||||||||||||||||||| |  |||||||| ||||    
T  15736272 ttggatatgatgtttatcatgagatgttgtatgttatcttacttagaat 15736320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 16105246 - 16105195
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  16105246 atgtccatgcatcatagtcttgttgagatt-gtagttgtaaaagggttgaact 16105195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 482 - 514
Target Start/End: Original strand, 17790640 - 17790672
Alignment:
Q  482 tcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||||||| |||||||||||||||||||||    
T  17790640 tcatgttgagtcttgtagttgtaaaagggttga 17790672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 18004064 - 18004112
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||| |||||||||||||||||||| |  |||||||| ||||    
T  18004064 ttggatatgatgtttatcatgagatgttgtatgttatcttacttagaat 18004112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 18128973 - 18128922
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  18128973 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 18128922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 19609344 - 19609312
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgt 254  Q
    |||||| ||||||||||||||||||||||||||    
T  19609344 atgttgaatatgatatttatcatgagatgttgt 19609312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 22594510 - 22594570
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaat 282  Q
    ||||||||||||| || ||||| || |||||||||||||| ||||||||||| || |||||    
T  22594510 tgttggatatgatgttcatcataaggtgttgtatttcctctttacttggaatgtgggaaat 22594570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 23151948 - 23151897
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  23151948 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 23151897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 25745779 - 25745830
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  25745779 atgtccatgcatgatagtcgtgttgagatt-gtagttgtaaaagggttgaact 25745830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 20 - 517
Target Start/End: Original strand, 71311 - 71811
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgcta 118  Q
    ||||||||||||||||| |||||||||| || | |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  71311 cttaagcttatgattacttgattgattaagactatcttgtgagcttcaaacttgaacaagttattttatcttgggtaatatcaatgttagccggtagcta 71410  T
Q  119 cttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg 218  Q
    ||||||||  ||||  ||   |||||||||||||||  |||||||||| ||||  |||||||||||||||| |||||||||| |||||||||||||||||    
T  71411 cttgatacaaatttc-accaaaaatgattcttttagcaaattgtcttagaatccctcgtgactagccttatttgtctaaatggaggtgtgtgatgaattg 71509  T
Q  219 tagatgttggatatgatatttatcatgagatgttgtatttc---ctcttacttggaatatgagaaataattgaaacagtgagattatatgatgtacggaa 315  Q
    ||||||||||||||||||||| || |||| | ||||||||    ||||||||||||||| | | |||| |||| | ||||| |||| |||||||| ||||    
T  71510 tagatgttggatatgatatttgtcctgaggtattgtatttttctctcttacttggaataaggggaatatttgagatagtgaaattacatgatgtatggaa 71609  T
Q  316 tgtagtctcttaattgtttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctt 415  Q
    ||| | ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||    
T  71610 tgttgactcttaattgtttatgactggaatgttgtatggacgtaatttcttgataatgcgaatgttgtggagatgatcaatataattggaaggtgtcctt 71709  T
Q  416 tatattgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaa 515  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  71710 tatattgttgtgaaaattggaggcaattgcattattgagtccttactgtatgtccatgcatcatagtcatgttgagttttgtagttgtaaaagggttgaa 71809  T
Q  516 ct 517  Q
    ||    
T  71810 ct 71811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 20 - 517
Target Start/End: Original strand, 55441805 - 55442294
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgcta 118  Q
    ||||||||||||||| ||  |||||||| |||| |||||||| ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  55441805 cttaagcttatgatttcacaattgattaagattatcttgtgaacttcaaacttgaataagttattt-atcttggatattatcaatgttagccggttgcta 55441903  T
Q  119 cttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg 218  Q
    ||| ||||  ||||  ||    |||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||     
T  55441904 cttaatacaaatttc-accaataatgattcttttagccaattgtcttataatccttcgtgactagctttatttgtctaaatgaaggtgtgtgatgaatta 55442002  T
Q  219 tagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgatgtacggaatgt 318  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| | || ||||||||||||| || ||||    
T  55442003 tagatgttggatatgatatttatcatgagctgttgtctttcctcttatttggaatatgagaaataattg-aacggagaaattatatgatgtatgggatgt 55442101  T
Q  319 agtctcttaattgtttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttgg-aagatgtccttta 417  Q
     | ||||||||||||||||| | |||||||||||||| |||| ||||| | |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  55442102 tgactcttaattgtttatgatcggaatgttgtatggatgtaacttcttaataatgcgaatgttgtggagatgatcaatataattggaaagatgtccttta 55442201  T
Q  418 tattgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||      |||||| ||| |||||||||| ||||||||||||||| |||||||||    
T  55442202 tattgttgtgaaaattggaggtgattgcattattgagtccttactgt------atgcatcatagtcatgttgag-tttgtagttgtaaaatggttgaact 55442294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 14079761 - 14079521
Alignment:
Q  19 acttaagcttatgattacatgattgattatgatt-tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  14079761 acttaagcttatgattacatgattgattaggattatcttgtgagcttcaaacttgaacaagttattttatcttgggtattatcaatgttagtcggttgct 14079662  T
Q  118 acttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaatt 217  Q
    |||||||||  ||||  ||   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14079661 acttgatacaaatttc-accaaaaatgattcttttagccaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaatt 14079563  T
Q  218 gtagatgttggatatgatatttatcatgagatgttgtatttc 259  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14079562 gtagatgttggatatgatatttatcatgagatgttgtatttc 14079521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 11330353 - 11330533
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| ||||||| ||||| ||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||    
T  11330353 ttatgacttgaatgttgtgtggacgtaaattcttgataatgcaaatgtggtggagatgatcaatataattggaagttgtcctttatattgttgtgataat 11330452  T
Q  433 tggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    || ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  11330453 tg-aggtgattgcattgttgagtccttactgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 11330533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 332 - 514
Target Start/End: Complemental strand, 15874983 - 15874800
Alignment:
Q  332 tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    |||||||| ||| |||||| ||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||     
T  15874983 tttatgactagattgttgtgtggacgtaaattcttgataatgcaaatgttgtggagataatcaatatatttggaagttgtcctttatattgttgtgaaag 15874884  T
Q  432 ttggaggtgattgcattattgagtccttactgt-atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    || |||||||||||||| ||||||||||||| | |||||||||||| | | ||||||||||| |||||||||||||||||||||    
T  15874883 tttgaggtgattgcattgttgagtccttactttaatgtccatgcatcaaagtcatgttgagtcttgtagttgtaaaagggttga 15874800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 14060597 - 14060766
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||| ||||||||||||| || |||| |||||||||||||||| ||||||||| || |||||    
T  14060597 atgttgtgtggacgtaatttcttgataatgcaaatattgtggggatgatcaatatagtttgaagttgtcctttatattgttatgaaaattgaag-tgatt 14060695  T
Q  444 gcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||| |||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  14060696 gcattgttgaatccttactgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 14060766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 342 - 514
Target Start/End: Original strand, 38812345 - 38812521
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||| | ||||| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||    
T  38812345 gaatgttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgaggtg 38812444  T
Q  441 a--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  38812445 atcttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagtctagtagttgtaaaagggttga 38812521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 342 - 514
Target Start/End: Complemental strand, 48420484 - 48420307
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggaga-tgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggt 439  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||    ||||||||||||||||||| |||||||||||||||||||||||||  ||| |    
T  48420484 gaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggtttgtgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgagat 48420385  T
Q  440 ga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||  ||||||| | ||||| |||| ||||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  48420384 gatcttgcattgtcgagtctttacttgtatgtccatgcatcattgtcatgttgagtcttgtagttgtaaaagggttga 48420307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 342 - 514
Target Start/End: Original strand, 12490086 - 12490262
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  ||| ||    
T  12490086 gaatgttgtgtggacgtaatttcttgataatgaaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgagatg 12490185  T
Q  441 a--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||||||| | ||||| |||| |||||||||||| || ||  ||||||||||| |||||  ||||||||||||||    
T  12490186 atcttgcattgtcgagtctttacttgtatgtccatggatcattgtcatgttgagtcttgtatctgtaaaagggttga 12490262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 310
Target Start/End: Original strand, 33369963 - 33370137
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgata 236  Q
    ||||| |||||||| | ||||| |||||| |||||| |||||||||||||| || |||||||||| |||||| ||| |||| || |||||||||||||||    
T  33369963 aaatggttcttttaagccaattatcttatgatctttagtgactagccttatatgactaaatgaagatgtgtgaatggattgttatatgttggatatgata 33370062  T
Q  237 tttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattgaaacagtgagattatatgatgta 310  Q
    |||||||| || |||||||||| ||| ||||||||||||||||||||| |||||   |||| | |||||||||||    
T  33370063 tttatcataaggtgttgtattttctctttacttggaatatgagaaatatttgaagtggtgaaactatatgatgta 33370137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 283
Target Start/End: Complemental strand, 34558949 - 34558804
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgata 236  Q
    |||||||||||||| | ||||| |||||| ||||||||||| ||||||||| || |||||||||| |||| || |||||||| | |||||| ||||||||    
T  34558949 aaatgattcttttaagccaattatcttatgatctttcgtgattagccttatatgactaaatgaagatgtgcgaatgaattgttatatgttg-atatgata 34558851  T
Q  237 tttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  34558850 tttatcataagatgttgtatgttctcttacttggaatatgagaaata 34558804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 39654964 - 39654809
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    ||||||| |||||||| |||||||||||||| |||| |||||||||  ||||| || |||| ||||| ||||||| ||||| || | |||||||||||||    
T  39654964 ggaaatggttcttttaagtcaattgtcttatgatctatcgtgactattcttatatgactaagtgaagatgtgtgaatgaatggttatatgttggatatga 39654865  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    ||||| |||| ||||||||||| ||||||||||| |||| ||||||||| ||||||    
T  39654864 tatttgtcataagatgttgtatgtcctcttacttagaatgtgagaaatacttgaaa 39654809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 13327679 - 13327789
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtct-aaatgaaggtgtgtgatgaattg-tagatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| ||||||||||||||||||||||| ||||||| || |||||||| |||||||||||||| |||||||||||||||||||||||||| | ||| ||    
T  13327679 caattatcttataatctttcgtgactagctttatgtgactaaaatgaagatgtgtgatgaattgttagatgttggatatgatatttatcataatatgatg 13327778  T
Q  254 tatttcctctt 264  Q
    ||||| |||||    
T  13327779 tattttctctt 13327789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 378 - 491
Target Start/End: Complemental strand, 39654688 - 39654572
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttgcattattgagtccttactgtatgtccatgc 474  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||  ||||||||| ||||| || ||  ||||||||||    
T  39654688 tgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgaggtgatgttgcattatcgagtctttgctacatgtccatgc 39654589  T
Q  475 attatactcatgttgag 491  Q
    || ||| || |||||||    
T  39654588 atcatagtcgtgttgag 39654572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 9591740 - 9592000
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggtt-gc 116  Q
    |||||||| |||| |||||||||||||| |||| ||||||||| || |||||||||| || |||||| || ||||  |||||||||||| |||| || ||    
T  9591740 cttaagctcatgactacatgattgattaagattatcttgtgagttttcaaacttgaataaattattt-attttggaaattatcaatgttggccgttttgc 9591838  T
Q  117 tacttgatacgtatt---tttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgat 212  Q
     ||||||||  |||    ||||  ||||||||||||||| || ||||| |||||||||| |||||||||||||||||||  ||||||||         ||    
T  9591839 cacttgata--tatggaatttatcggaaatgattctttttagccaattatcttataatcattcgtgactagccttatgtaactaaatga---------at 9591927  T
Q  213 gaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    |||||| |||||| ||||||||||||| ||||| ||||||||||||| ||| ||||||| ||||||| |||||    
T  9591928 gaattgttagatgctggatatgatattgatcataagatgttgtattttctctttacttgtaatatgaaaaata 9592000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 48420729 - 48420582
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgat-gaattgt-agatgttggatatga 234  Q
    ||||||| |||||||| | ||||| |||||| |||||||||||||||||||   || ||||||| || |||||||  ||||| | |  ||||||||||||    
T  48420729 ggaaatggttcttttaagccaattatcttatgatctttcgtgactagccttgaatgactaaatggagatgtgtgaacgaatttttatgtgttggatatga 48420630  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||    
T  48420629 tatttatcataagatgttgtatgttctcttacttggaatatgagaaat 48420582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 9303798 - 9303868
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  9303798 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgaga 9303868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 11198929 - 11199015
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  11198929 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 11199015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 14294230 - 14294144
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  14294230 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctgtatattgtggtgaaaattg 14294144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 14299857 - 14299771
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  14299857 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctgtatattgtggtgaaaattg 14299771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 508
Target Start/End: Complemental strand, 47983709 - 47983539
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||| | ||||| ||| | | |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||  ||| ||    
T  47983709 gaatgttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttgaaagttatgagatg 47983610  T
Q  441 a-ttgcatt-attgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    | ||||||| ||  |||| || || |||||||||||||| ||| |||||||||  ||||| ||||||||||    
T  47983609 atttgcattgatccagtctttgctcgtatgtccatgcatcatagtcatgttgaactttgtggttgtaaaag 47983539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 508
Target Start/End: Complemental strand, 47992996 - 47992826
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||| | ||||| ||| | | |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||  ||| ||    
T  47992996 gaatgttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttgaaagttatgagatg 47992897  T
Q  441 a-ttgcatt-attgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    | ||||||| ||  |||| || || |||||||||||||| ||| |||||||||  ||||| ||||||||||    
T  47992896 atttgcattgatccagtctttgctcgtatgtccatgcatcatagtcatgttgaactttgtggttgtaaaag 47992826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 508
Target Start/End: Complemental strand, 48002283 - 48002113
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||| | ||||| ||| | | |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||  ||| ||    
T  48002283 gaatgttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttgaaagttatgagatg 48002184  T
Q  441 a-ttgcatt-attgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    | ||||||| ||  |||| || || |||||||||||||| ||| |||||||||  ||||| ||||||||||    
T  48002183 atttgcattgatccagtctttgctcgtatgtccatgcatcatagtcatgttgaactttgtggttgtaaaag 48002113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 342 - 508
Target Start/End: Complemental strand, 48011569 - 48011399
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||| | ||||| ||| | | |||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||  ||| ||    
T  48011569 gaatgttgtgtggacgtaaatacttgataatccaattgttgtggagatgatcaatatatttggaaggtgtcctttatattgttttgaaagttatgagatg 48011470  T
Q  441 a-ttgcatt-attgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    | ||||||| ||  |||| || || |||||||||||||| ||| |||||||||  ||||| ||||||||||    
T  48011469 atttgcattgatccagtctttgctcgtatgtccatgcatcatagtcatgttgaactttgtggttgtaaaag 48011399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 370 - 491
Target Start/End: Original strand, 11883646 - 11883770
Alignment:
Q  370 aatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttgcattattgagtccttactgtat 466  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||||||  | ||||||| ||||| || ||  ||    
T  11883646 aatgctaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtggaaagtgtgaggtgatgtcgcattatcgagtctttgctacat 11883745  T
Q  467 gtccatgcattatactcatgttgag 491  Q
    |||||||||| ||| || |||||||    
T  11883746 gtccatgcatcatagtcgtgttgag 11883770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 333 - 434
Target Start/End: Complemental strand, 12951869 - 12951768
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| |||| |||| | || || ||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  12951869 ttatgacttgaatgttgtgtggaagtaaatactggataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaat 12951770  T
Q  433 tg 434  Q
    ||    
T  12951769 tg 12951768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 131 - 289
Target Start/End: Complemental strand, 15516804 - 15516643
Alignment:
Q  131 ttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttg 227  Q
    ||||| |||||||| |||||||| | ||||| |||||| |||||| |||||||||||| | || ||||||| || ||||||| ||||| || | ||||||    
T  15516804 ttttattggaaatggttcttttaagccaattatcttatgatctttagtgactagccttgtatgactaaatggagatgtgtgaatgaatggttatatgttg 15516705  T
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaa 289  Q
    |||||||||||| |||| |||| | |||| ||||||||||| |||| ||||||||| |||||    
T  15516704 gatatgatatttgtcataagatatggtatgtcctcttacttagaatgtgagaaatacttgaa 15516643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 508
Target Start/End: Original strand, 33370219 - 33370386
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| ||||||||  | ||||| ||||| | ||| || ||||||||||||||| ||||||| | ||||||||||| |||||||||||  |||||||      
T  33370219 tgttgtgtggacgtacatacttgataatgcaattgtggttgagatgatcaatataattggaagttatcctttatattattgtgaaaattatgaggtgatt 33370318  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| |||||| ||||||||    
T  33370319 ttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgtagctgtaaaag 33370386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 280
Target Start/End: Complemental strand, 19945793 - 19945531
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctac 119  Q
    |||||||| |||| |||||||||||||| ||||  ||| ||||||  ||| ||   ||||| |||| ||||||  |||||||||||| | || |||| ||    
T  19945793 cttaagctcatgactacatgattgattaagattgtttgagagcttttaacatgtctaagttgttttgtcttgggaattatcaatgttggtcgtttgccac 19945694  T
Q  120 ttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaatt 217  Q
    ||||||||  ||||  | ||||||| ||| ||| |  ||||| |||||| |||| ||||||||| |||||| || |||| ||||| ||||||| |||||     
T  19945693 ttgatacggtttttgtc-ggaaatgtttcctttgaaccaattttcttatgatctatcgtgactatccttatatgactaagtgaagatgtgtgaatgaatg 19945595  T
Q  218 gt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    || | ||||| |||||||| ||||||||||||| | || || ||| ||||||||||||||||||    
T  19945594 gttatatgtttgatatgatgtttatcatgagatatcgttttccctattacttggaatatgagaa 19945531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 17957530 - 17957588
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  17957530 atgttggatatgatatttatcatgagatgttgtatgttctcttacttggaatatgagaa 17957588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 40938532 - 40938446
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  40938532 tgtatggacatgttttcttgataatgcaaatgttatggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 40938446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 156 - 280
Target Start/End: Original strand, 54652835 - 54652961
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| |||| ||||||||| |||||| || |||| ||||| ||||||| ||||| || | |||||| ||||||||||| ||||| |||||||    
T  54652835 caattttcttatgatctatcgtgactatccttatatgactaagtgaagatgtgtgaatgaatggttatatgttgtatatgatatttgtcatgggatgttg 54652934  T
Q  254 tatttcctcttacttggaatatgagaa 280  Q
    ||| | |||||||||||||||||||||    
T  54652935 tatgttctcttacttggaatatgagaa 54652961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 434
Target Start/End: Original strand, 11062410 - 11062479
Alignment:
Q  365 ttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  11062410 ttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 11062479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 14522677 - 14522750
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  14522677 tttcttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattg 14522750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 433
Target Start/End: Complemental strand, 15516507 - 15516452
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  15516507 tgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaatt 15516452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 41660663 - 41660532
Alignment:
Q  156 caattgtcttataa-tctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtaga-tgttggatatgatatttatcatgagatgtt 252  Q
    ||||| |||||||| |||||||||||||||||||| || |||||||||  |||| || |||||||  |  |||||||||||||||||||||| || ||||    
T  41660663 caattatcttataactctttcgtgactagccttatatgactaaatgaatatgtgagaatgaattggggggtgttggatatgatatttatcataaggtgtt 41660564  T
Q  253 gtatttcctc-ttacttggaatatgagaaata 283  Q
    |||||| ||| ||||||| |||||||||||||    
T  41660563 gtattttctctttacttgaaatatgagaaata 41660532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 7852771 - 7852713
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  7852771 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 7852713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 16819868 - 16819810
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  16819868 atgttggatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 16819810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 33340806 - 33340748
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  33340806 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 33340748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 12489817 - 12489960
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    |||||||||||||||| | |||||||||||| |||||||||||||| ||| || || |||| |  || ||||||| |||||||| |  ||||||||||||    
T  12489817 ggaaatgattcttttaagccaattgtcttatgatctttcgtgactaacct-atatgactaagtagagatgtgtgaatgaattgttatgtgttggatatga 12489915  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||| |||   ||||| | |||||||||||||||||||||||    
T  12489916 tatttatcataaga---tgtatgttctcttacttggaatatgagaaat 12489960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 14297286 - 14297213
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  14297286 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 14297213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 14302913 - 14302840
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  14302913 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 14302840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 433
Target Start/End: Complemental strand, 35122488 - 35122403
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| |||||||||    
T  35122488 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaatt 35122403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 12952011 - 12951956
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  12952011 gatatgatatttatcataagatgttgtatgttctcttacttggaatatgagaaata 12951956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 146 - 279
Target Start/End: Complemental strand, 15549572 - 15549448
Alignment:
Q  146 ttcttttagtcaattgtcttataa-tctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgtagatgttggatatgatatttatcat 244  Q
    |||||| || ||||| |||||||| ||||||||||||| |||||| || |||||||||| |||||          | ||||||||||||||||||  |||    
T  15549572 ttctttaagccaattatcttataaatctttcgtgactatccttatatgactaaatgaagatgtgt----------atatgttggatatgatattttccat 15549483  T
Q  245 gagatgttgtatttcctcttacttggaatatgaga 279  Q
    |||||||||||| | ||||||||||||||||||||    
T  15549482 gagatgttgtatgttctcttacttggaatatgaga 15549448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 2450524 - 2450582
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  2450524 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 2450582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 16260004 - 16259946
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  16260004 atgttggatatgataattgtcatgagatgttgtatgttctcttacttggaatatgagaa 16259946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 18909650 - 18909592
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  18909650 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 18909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 22274005 - 22273947
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  22274005 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 22273947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 49231175 - 49231117
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||||||||||||||||| || | | ||||||||||||||||||    
T  49231175 atgttggatatgatatttatcatgagatgttgttttccatattacttggaatatgagaa 49231117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 51159674 - 51159732
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  51159674 atgttgaatatgatatttatcatgagatgttgttttcccttttacttggaatatgagaa 51159732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 53769621 - 53769563
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  53769621 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 53769563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 433
Target Start/End: Original strand, 12562848 - 12562920
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||  | |||| |||||||| |||||||||    
T  12562848 tttcttgataatgcaattgttgtggagatgatcaatatatttggaatttttcctctatattgtggtgaaaatt 12562920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 279
Target Start/End: Complemental strand, 17203707 - 17203596
Alignment:
Q  169 atctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttac 266  Q
    |||||| ||||||||| | || || |||||||||| ||| ||| ||||| || | |||||| |||||||||||||||| ||||||||||| | |||||||    
T  17203707 atcttttgtgactagcttcatatgactaaatgaagatgtatgaatgaatggtgaaatgttg-atatgatatttatcataagatgttgtatgttctcttac 17203609  T
Q  267 ttggaatatgaga 279  Q
    |||||||||||||    
T  17203608 ttggaatatgaga 17203596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 14522398 - 14522513
Alignment:
Q  139 gaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgat 235  Q
    ||||||||||||||| ||||| | |||||| |||||||||||||| |||| | || ||||||   | ||||||| |||||||| |  |||||||||||||    
T  14522398 gaaatgattcttttaagtcaaatatcttatgatctttcgtgactaaccttgtatgactaaattgtgatgtgtgaatgaattgttatgtgttggatatgat 14522497  T
Q  236 atttatcatgagatgt 251  Q
    ||||||||||||||||    
T  14522498 atttatcatgagatgt 14522513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 283
Target Start/End: Complemental strand, 17937327 - 17937249
Alignment:
Q  206 gtgtgatgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    |||||||||||||| | ||||||||||||||||| |||||||||| |||||||| ||| ||||||| |||||||||||||    
T  17937327 gtgtgatgaattgttaaatgttggatatgatatt-atcatgagattttgtattttctctttacttgtaatatgagaaata 17937249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 47983869 - 47983814
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  47983869 gatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaaata 47983814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 47993156 - 47993101
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  47993156 gatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaaata 47993101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 48002443 - 48002388
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  48002443 gatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaaata 48002388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 48011729 - 48011674
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||    
T  48011729 gatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaaata 48011674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 282
Target Start/End: Original strand, 11883366 - 11883511
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgata 236  Q
    |||||||||||||| |||||||||||||| |||| |||||||||  ||||| || |||  ||||  ||||||| ||||| || | ||||||||||||  |    
T  11883366 aaatgattcttttaagtcaattgtcttatgatctatcgtgactattcttatatgactaggtgaaaatgtgtgaatgaatggttatatgttggatatggaa 11883465  T
Q  237 tttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    ||| ||||  ||| |||||| ||||||||||| |||| ||||||||    
T  11883466 tttgtcataggatattgtatgtcctcttacttagaatgtgagaaat 11883511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 53899891 - 53899964
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||| |||||||||||||||||| |||| || |||||| |||| ||| ||||||||||    
T  53899891 tttcttgataatgcaaatgtggtggagatgatcaatataattgggagttgtcctatataatgtggtgaaaattg 53899964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 17138238 - 17138182
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||||||||||||||||| |||| || ||||||||||||||  ||||||||||    
T  17138238 tgttgtggagatgatcaatatagttgggagttgtcctttatattgaggtgaaaattg 17138182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 492
Target Start/End: Complemental strand, 41660435 - 41660272
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||| || |||||| ||||||||| | ||||| ||||| | |||||| ||| || |||||||| ||||| | | ||||||||||| ||||||| ||    
T  41660435 ttatgacctgattgttgtgtggacgtaaatacttgataatgcaattgttgttgaggtggtcaatataattggaggttatcctttatattattgtgaatat 41660336  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagt 492  Q
    |   ||||||  ||||||| | ||||| || | ||||||||||||||| ||| |||||||||||    
T  41660335 tataaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagt 41660272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 189
Target Start/End: Original strand, 47785873 - 47786045
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagc-ttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| |||||||||||||| |||| | |||||||| |||||||||||||||||||||||   ||||  | || |||||||| |||||||      
T  47785873 cttaagctcatgactacatgattgattaagattattttgtgagccttcaaacttgaacaagttattttgctttggaaactagcaatgttaaccggttgtc 47785972  T
Q  118 acttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttat 189  Q
    ||||||||   | ||||   |||||||||| |||| || ||||| | || | ||||||| |||||||||||||    
T  47785973 acttgatatagacttttgtcggaaatgattattttaagccaattattttgtgatctttcatgactagccttat 47786045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 16745366 - 16745425
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| ||||||||||| |||||||||||||| ||| ||| ||||||||||||||||||    
T  16745366 atgttgaatatgatatttgtcatgagatgttgtttttccctattacttggaatatgagaa 16745425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 431
Target Start/End: Original strand, 17523766 - 17523849
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    ||||||||| | ||||||||| |||||  |||||| |||||||||||||||| |||| || |||||| |||||||  |||||||    
T  17523766 tgtatggacatgatttcttgataatgcacatgttgcggagatgatcaatataattgggagttgtcctatatattggggtgaaaa 17523849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 506
Target Start/End: Original strand, 5229434 - 5229598
Alignment:
Q  347 ttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttg-tgaaaatt-ggaggtga--t 442  Q
    |||| ||||||||| | ||||| ||||| | |||||| ||| ||||||||||| ||||| | | ||||||||||||||| |||| |||  |||||||  |    
T  5229434 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgttgaatattatgaggtgattt 5229533  T
Q  443 tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaa 506  Q
    |||||| | ||||  || | ||||||||||||||| ||| ||||||||||| |||  ||||||||    
T  5229534 tgcattgtcgagtttttgcttgtatgtccatgcatcatagtcatgttgagtcttgatgttgtaaa 5229598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 362 - 517
Target Start/End: Complemental strand, 8630634 - 8630479
Alignment:
Q  362 ttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgcattattgagtcctt 459  Q
    ||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  ||||||||| |||| |||    
T  8630634 ttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtgattgttgttgcattatcgagt-ctt 8630536  T
Q  460 actgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
      |  || ||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  8630535 gttacatatccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 8630479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 14284258 - 14284198
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  14284258 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 14284198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 17099502 - 17099429
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  17099502 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 17099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 19230848 - 19230775
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||||    
T  19230848 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattg 19230775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 19572141 - 19572214
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  19572141 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 19572214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 47786347 - 47786397
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| ||||||||||||  ||||||||||||||||||||||    
T  47786347 atgtccatgcatcatagtcatgttgagtt--gtagttgtaaaagggttgaact 47786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 16260146 - 16260098
Alignment:
Q  229 atatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    ||||||||||||||||||||| |||| || ||| |||||||||||||||    
T  16260146 atatgatatttatcatgagatattgttttccctattacttggaatatga 16260098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 510
Target Start/End: Original strand, 9592125 - 9592275
Alignment:
Q  364 cttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga--ttgcattattgagtcctta 460  Q
    ||||| ||||| | |||||| ||| ||||||||||| ||||||| |||| ||||||||||| |||  |||  || ||||  ||||||| | ||||| ||     
T  9592125 cttgataatgcaattgttgttgaggtgatcaatataattggaagttgtcatttatattgttttgattattatgaagtgatgttgcattgtcgagtctttg 9592224  T
Q  461 c-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    | |||||||| |||||| ||| ||||||||||| |||| | ||||||||||    
T  9592225 cttgtatgtctatgcatcatagtcatgttgagtcttgtggctgtaaaaggg 9592275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 17913608 - 17913683
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgt 423  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||| ||||||| ||||| |  ||||| ||||||||    
T  17913608 tgtatggacatgttttcttgataatgcaaatgttgtggagatgaacaatataattggatgtcgtcctatatattgt 17913683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 47786240 - 47786315
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgt 423  Q
    ||||||||| |  |||||||| ||||  ||||| |||||||||||||||||| |||| || |||||| ||||||||    
T  47786240 tgtatggacatgctttcttgataatgaaaatgtggtggagatgatcaatataattgggagttgtcctatatattgt 47786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 4163242 - 4163312
Alignment:
Q  63 ttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctacttgatacgtatttt 133  Q
    |||||||||||| ||||||| |||| |||   |||||||||||| |||| |||| |||||||||| |||||    
T  4163242 ttcaaacttgaataagttatcttattttgaaaattatcaatgttggccgtttgccacttgatacggatttt 4163312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 51159835 - 51159921
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  51159835 tgtatggacatgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 51159921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 2048848 - 2048775
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  2048848 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 2048775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 12020934 - 12020881
Alignment:
Q  226 tggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||||||||| |||| |||||| | ||||| ||||| ||||||||    
T  12020934 tggatatgatatttatcataagattttgtatgttctcttgcttgggatatgaga 12020881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 12351215 - 12351288
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  12351215 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 12351288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 13816301 - 13816240
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||    
T  13816301 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 13816240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 16259829 - 16259756
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  16259829 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 16259756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 33340631 - 33340558
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  33340631 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 33340558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 7852491 - 7852440
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  7852491 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 7852440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 16819972 - 16819924
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||| |||||||||||||||||||| |  |||||||| ||||    
T  16819972 ttggatatgatgtttatcatgagatgttgtatgttatcttacttagaat 16819924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 2e-68; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 32967518 - 32967701
Alignment:
Q  332 tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  32967518 tttatgactggaatgttgtatggatgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaag 32967617  T
Q  432 ttggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  32967618 ttggaggtgattgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 32967701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 347 - 514
Target Start/End: Complemental strand, 7727383 - 7727217
Alignment:
Q  347 ttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattgca 446  Q
    |||| ||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| |||||    
T  7727383 ttgtgtggacgtaatttcttgataatgcaaatgttatggagatgatcaatataattggaagttgtcctttatattgttgtgaaaatt-gaggtggttgca 7727285  T
Q  447 ttattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    || |||||| ||||| |||||||||||||| ||| ||||||||||| ||||||||||||| |||||||    
T  7727284 ttgttgagttcttacagtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaggggttga 7727217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 342 - 517
Target Start/End: Complemental strand, 21615826 - 21615648
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa-ttggaggtg 440  Q
    ||||||||| ||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  21615826 gaatgttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattttgaggtg 21615727  T
Q  441 at-tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    || |||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||| |||||||| ||||||||    
T  21615726 atctgcattgttgagtccttacttgtatgtccatgcatcataatcatgttgagtcttgtagctgtaaaagagttgaact 21615648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 344 - 517
Target Start/End: Complemental strand, 23492811 - 23492639
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| |||| |||||||||||| ||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||    
T  23492811 atgttgtgtggatgtaatttcttgataatga-aatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 23492714  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||| | |||||||||||| ||||||||||||||| ||| ||||||| ||| |||||||||||||| |||||||||    
T  23492713 gcactgttgagtccttacttgtatgtccatgcatcatagtcatgttaagtcttgtagttgtaaaaaggttgaact 23492639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 333 - 514
Target Start/End: Complemental strand, 19861056 - 19860872
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa- 431  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||     
T  19861056 ttatgactcgaatgttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatattgttgtaaaaat 19860957  T
Q  432 ttggaggt-gattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    || ||||| | ||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||| |||||||| |||||    
T  19860956 tttgaggtggtttgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagctgtaaaagagttga 19860872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 344 - 514
Target Start/End: Complemental strand, 13793942 - 13793769
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaa-attggaggtga- 441  Q
    ||||||| ||||||||||| ||||| ||| | | ||||| |||||||||||||||||||||||||||||||||||||| ||||||||  |||||| | |     
T  13793942 atgttgtgtggacgtaattacttgataatacaattgttgaggagatgatcaatatatttggaagatgtcctttatattattgtgaaagtttggagatcat 13793843  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||| |||||||||||| ||||||| ||||||| ||| ||||||||||| |||| ||||||||||||||||    
T  13793842 ttgcattgttgagtccttacttgtatgttcatgcatcatagtcatgttgagtcttgtggttgtaaaagggttga 13793769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 342 - 517
Target Start/End: Complemental strand, 28888729 - 28888555
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga 441  Q
    ||||||||| ||||||||| ||||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  28888729 gaatgttgtgtggacgtaacttcttgataatgcaaatgtagtggatatgatcaatatatttggaagttgtcctttatattgttgtgaaagttggaggtga 28888630  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
      |  |  |  | ||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||    
T  28888629 aagggt--tgaactccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaaaggttgaact 28888555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 156 - 285
Target Start/End: Original strand, 20833117 - 20833248
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgttggatatgatatttatcatgagatgttgt 254  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| ||||| |||    
T  20833117 caattgtcttatgatcattcgtgactagccttatgtgtctaaatgaagatgtgtgatgaattgttaaatgttggatatgatatttatcataagatgatgt 20833216  T
Q  255 atttcctc-ttacttggaatatgagaaataat 285  Q
    |||| ||| ||||||| | | |||||||||||    
T  20833217 attttctctttacttgtattgtgagaaataat 20833248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 37982492 - 37982342
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgata 236  Q
    |||||||||||||| | ||||| |||||| | ||||||||||||||||||| || ||||| ||||  |||||| |||||||| | |||| ||||||||||    
T  37982492 aaatgattcttttatgccaattatcttatgacctttcgtgactagccttatatgactaaaggaagaggtgtgaatgaattgttatatgtaggatatgata 37982393  T
Q  237 tttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  37982392 tttatcataagatgttgtatgttctcttacttggaatatgagaaataattg 37982342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 342 - 433
Target Start/End: Complemental strand, 431240 - 431149
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  431240 gaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttgtattgttgtgaaaatt 431149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 24226811 - 24226996
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||||| | |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||    
T  24226811 ttatgacttgaatgttgtgtggacgtaaatacttgataatgcaattgttgtggaggtgatcaatatatttggaagttgtcctttatattgtcgtgaaaat 24226910  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||| |||  ||||||| | ||||| || | ||||||| ||||||| ||  ||||||||||| |||||| ||||||||||||||    
T  24226911 tatgagatgattttgcattgtcgagtctttgcttgtatgttcatgcatcatggtcatgttgagtcttgtagctgtaaaagggttga 24226996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 37189471 - 37189657
Alignment:
Q  332 tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    ||||||||  ||||||||| | ||||||| |||||||  |||| ||||||||||| |||||||||||||||||| | |||||||||||||||||| || |    
T  37189471 tttatgacttgaatgttgtgtagacgtaaattcttgatgatgcaaatgttgtggaaatgatcaatatatttggaggttgtcctttatattgttgttaata 37189570  T
Q  432 tt-ggaggtg--attgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||  ||| ||   ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| |||||| ||||||||||||||    
T  37189571 ttatgagatggtcttgcattgtcgagtctttgcatgtatgtccatgcatcataatcatgttgagtcttgtagctgtaaaagggttga 37189657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 162 - 306
Target Start/End: Complemental strand, 21616043 - 21615898
Alignment:
Q  162 tcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtag-atgttggatatgatatttatcatgagatgttgtatttc 259  Q
    |||||| ||||||||||||||||||||| ||  ||||||||| ||||||| ||| |||| | |||||| |||||||||||||||| ||||||||||| |     
T  21616043 tcttatgatctttcgtgactagccttatatgaataaatgaagatgtgtgaatgacttgttgtatgttg-atatgatatttatcataagatgttgtatgtt 21615945  T
Q  260 ctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    ||||||||||||||||||||||||| || ||  |||||| |||||||    
T  21615944 ctcttacttggaatatgagaaataaatggaatggtgagactatatga 21615898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 23493101 - 23492950
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    |||||||||||||||| | |||||||||||| ||| |||||||||||||| || || |||| |  || ||||||| |||||||| |  ||||||||||||    
T  23493101 ggaaatgattcttttaagccaattgtcttatgatcattcgtgactagcct-atatgactaagtagagatgtgtgaatgaattgttatgtgttggatatga 23493003  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||| ||||    
T  23493002 tatttatcataagatgttgtatgttctcttacttggaatatgagaaatgattg 23492950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 431489 - 431340
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgata 236  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||| || || |||| |  || ||||||| |||||||| |  ||||||||||||||    
T  431489 aaatgattcttttaagtcaattgtcttatgatctttcgtgactagcct-atatgactaagtagagatgtgtgaatgaattgttatgtgttggatatgata 431391  T
Q  237 tttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||| ||||||||||| | || ||||||||||| |||||||| ||||    
T  431390 tttatcattagatgttgtatgttcttttacttggaatgtgagaaatgattg 431340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 1169844 - 1169915
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  1169844 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 1169915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 23453754 - 23453668
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  23453754 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 23453668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 23465259 - 23465173
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  23465259 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 23465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 43445056 - 43445127
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||| || ||||||||||||||||||||||    
T  43445056 tgatgaattgtagatgttgaatataatatttatcatgtgatgttgttttccctcttacttggaatatgagaa 43445127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 19861247 - 19861109
Alignment:
Q  169 atctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttact 267  Q
    ||||||||||||||||||||| || |||||||||| || |||| ||| |||| |  | | ||||||||||||||||| ||||||||||| | |||| |||    
T  19861247 atctttcgtgactagccttatatgactaaatgaagatgcgtgaatgacttgttgtagattgatatgatatttatcataagatgttgtatgttctctaact 19861148  T
Q  268 tggaatatgagaaataattgaaacagtgagattatatga 306  Q
    ||||||||||| ||||| || ||  |||||| |||||||    
T  19861147 tggaatatgaggaataaatggaatggtgagactatatga 19861109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 346 - 434
Target Start/End: Complemental strand, 3672798 - 3672710
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||| |||||||||   ||||| ||||| | |||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  3672798 gttgtgtggacgtaaacacttgataatgcaattgttgtggagatgatcaatatacttggaagttgtcctctatattgttgtgaaaattg 3672710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 17473071 - 17473142
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||||| | |||||| ||||||||||||||    
T  17473071 tgatgaatcgtagatgttgaatatgatatttgtcatgagatgttgtatgttctcttatttggaatatgagaa 17473142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 10779494 - 10779552
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  10779494 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 10779552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 19404384 - 19404298
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||| |||||||||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  19404384 tgtatggacatgttttcttgataatgcaaatgtggtggagatgaacaatatatttggaagttgtcctctatattgtggtgaaaattg 19404298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 21074804 - 21074862
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  21074804 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 21074862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 24184570 - 24184656
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  24184570 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 24184656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 491
Target Start/End: Original strand, 5452204 - 5452320
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttgcattattgagtccttactgtatgtccatgc 474  Q
    |||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||  | ||||||| ||||| || ||  ||||||||||    
T  5452204 tgttctggagatgatcaatatgtttggaagttgtcctctatattgttgtgaaaattgtgaggtgatgtcgcattatcgagtctttgctacatgtccatgc 5452303  T
Q  475 attatactcatgttgag 491  Q
    || ||| || |||||||    
T  5452304 atcatagtcgtgttgag 5452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 11341600 - 11341515
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgat 307  Q
    |||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||  ||||||  |||| | ||||||||    
T  11341600 atgttggatatgatgtttgtcatgagatgttgtatgttctcttacttggaatatgagaaatgcttgaaatggtgaaactatatgat 11341515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 19498752 - 19498697
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||||| | |||||||||||||||||||||    
T  19498752 ttggatatgatgtttatcatgagatgttgtatgttctcttacttggaatatgagaa 19498697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 25004105 - 25004000
Alignment:
Q  19 acttaagcttatgattacatgattgattatgatt-tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    ||||||| |||||| |||||||||||||| |||| ||||||||||||  |||||| | ||||||||| || ||||  ||||||||||||||||| |||||    
T  25004105 acttaagattatgactacatgattgattaagattatcttgtgagctttgaacttggataagttattt-at-ttgggaattatcaatgttagccgtttgct 25004008  T
Q  118 acttgata 125  Q
    ||||||||    
T  25004007 acttgata 25004000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 11312 - 11254
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  11312 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 11254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 110297 - 110355
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||| |||||||||||||||    
T  110297 atgttggatatgatatttgtcatgagatgttgtatgttctcttccttggaatatgagaa 110355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 1221046 - 1221104
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||||    
T  1221046 atgttggatatgatatttgtcatgagatgttatatgttctcttacttggaatatgagaa 1221104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 5452007 - 5452069
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    |||||||||||||||||| |||||||||| ||||||||||| |||| ||||||||| ||||||    
T  5452007 gatatgatatttatcatgtgatgttgtatgtcctcttacttagaatgtgagaaatacttgaaa 5452069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 9731981 - 9732039
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  9731981 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 9732039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 11338224 - 11338309
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||||||||||||||||||||||| |||||  |||||| |||||||| ||||||||||    
T  11338224 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatatggaa-ttgtcctctatattgtggtgaaaattg 11338309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 22367799 - 22367857
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| ||||||| |||||||| | |||||||||||||||||||||    
T  22367799 atgttggatatgatatttgtcatgagctgttgtatgttctcttacttggaatatgagaa 22367857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 25425583 - 25425525
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||    
T  25425583 atgttggatatgatatttgtcatgagatgttgtatgttatcttacttggaatatgagaa 25425525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 35792466 - 35792524
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  35792466 atgttggatatgataattgtcatgagatgttgtatgttctcttacttggaatatgagaa 35792524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 19498875 - 19498811
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| |  |||||||| ||||    
T  19498875 tgatgaattgtagatgttgaatatgatgtttatcatgagatgttgtatgttatcttacttagaat 19498811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 4201280 - 4201339
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  4201280 atgttgaatatgatatttatcatgagatgttgtttttccctattacttggaatatgagaa 4201339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 7424642 - 7424583
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  7424642 atgttgaatatgatatttatcatgagatgttgtttttccctattacttggaatatgagaa 7424583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 23513754 - 23513703
Alignment:
Q  229 atatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  23513754 atatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 23513703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 25901537 - 25901592
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||| ||| |||||||||||||||||||| | |||||||||||||||||||||    
T  25901537 ttggatacgatgtttatcatgagatgttgtatgttctcttacttggaatatgagaa 25901592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 11582840 - 11582782
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||| ||| | |||||||||| ||||||||||    
T  11582840 atgttggatatgatatttgtcatgagatgttatatgttctcttacttgtaatatgagaa 11582782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 27185029 - 27185087
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||  || ||||||||||||||||||    
T  27185029 atgttgaatatgatatttatcatgagatgttgttttctctattacttggaatatgagaa 27185087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 28901106 - 28901005
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| ||||| ||||||||||||| | || |||||||||| ||||||| |||||||| |  |||||| ||||||||||||||| ||||||||    
T  28901106 caattatcttatgatctt-cgtgactagccttgtatgactaaatgaagatgtgtgaatgaattgttatgtgttggctatgatatttatcataagatgttg 28901008  T
Q  254 tat 256  Q
    |||    
T  28901007 tat 28901005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 28937501 - 28937400
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| ||||| ||||||||||||| | || |||||||||| ||||||| |||||||| |  |||||| ||||||||||||||| ||||||||    
T  28937501 caattatcttatgatctt-cgtgactagccttgtatgactaaatgaagatgtgtgaatgaattgttatgtgttggctatgatatttatcataagatgttg 28937403  T
Q  254 tat 256  Q
    |||    
T  28937402 tat 28937400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 11582665 - 11582592
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||| | |||||| |||||||  ||||||||||    
T  11582665 tttcttgataatgcaaatgttgtggagataatcaatataattggatgttgtcctatatattgaggtgaaaattg 11582592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 21234723 - 21234779
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  21234723 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 21234779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 35792320 - 35792372
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    ||||||||||||||||||||||||| |||| || ||| |||||||||||||||    
T  35792320 ttggatatgatatttatcatgagatattgttttccctattacttggaatatga 35792372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 37051945 - 37051889
Alignment:
Q  225 ttggatatgatatttatcatgagatgttg-tatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||    
T  37051945 ttggatatgatatttctcatgagatgttgttttttcctattacttggaatatgagaa 37051889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 3672963 - 3672908
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| |||||||||||   ||||||| ||||||||||||||||    
T  3672963 gatatgatatttatcataagatgttgtatgctctcttacctggaatatgagaaata 3672908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 18779307 - 18779366
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||| ||||||||||||||    
T  18779307 atgttgaatatgatatttatcatgagatgttgtttttccctattagttggaatatgagaa 18779366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 25901640 - 25901699
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  25901640 atgttgaatatgatatctatcatgagatgttgtttttccctattacttggaatatgagaa 25901699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 29913264 - 29913149
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttctt-gtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| |||||||||||||| ||||  || ||||  || |||||||||| ||| |||||||| ||||  |||||||||||| |||| ||||     
T  29913264 cttaagctcatgactacatgattgattaagattgatttgtgaattttcaaacttgaataaggtattttattttggaaattatcaatgttggccgtttgcc 29913165  T
Q  118 acttgatacgtatttt 133  Q
    |||||||||| |||||    
T  29913164 acttgatacggatttt 29913149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 20710941 - 20710855
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| |||||||||||||||||||| ||||||||| ||||  | | |||| |||||||  ||||||||||    
T  20710941 tgtatggacatgttttcttgataatgcgaatgttgtggagataatcaatataattgggtgttctcctatatattgaggtgaaaattg 20710855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 279
Target Start/End: Original strand, 21223789 - 21223967
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtc 194  Q
    |||||||||||| |||| |||| |||||||| |   |||||  ||||||||||| || |||||||| |||||| | |||| ||||||||| | || || |    
T  21223789 attatcaatgttggccgcttgccacttgatatgg--ttttatcggaaatgattccttaagtcaattatcttatgaccttt-gtgactagcttcatatgac 21223885  T
Q  195 taaatgaaggtgtgtgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||| ||| ||||  ||   | |||| |||||| | ||||||||| | ||||||||| | ||||||||||||||||||||    
T  21223886 taaatgaagatgtatgat--atgtgatatgt-ggatataaaatttatcataaaatgttgtatgttctcttacttggaatatgaga 21223967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 29191935 - 29191993
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| ||| |||||||||||| | || |||||||| |||||||||    
T  29191935 atgttggatatgatatttgtcacgagatgttgtatgttcttttacttgggatatgagaa 29191993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 20615573 - 20615517
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| ||| |||||||||||||| ||| ||| ||||||||||||||||||    
T  20615573 ttggatatgatgtttctcatgagatgttgtttttccctattacttggaatatgagaa 20615517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 407
Target Start/End: Complemental strand, 37982179 - 37982147
Alignment:
Q  375 gaatgttgtggagatgatcaatatatttggaag 407  Q
    |||||||||||||||||||||||||||||||||    
T  37982179 gaatgttgtggagatgatcaatatatttggaag 37982147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 24083308 - 24083193
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| |||||||||||||| ||||   |||||||  |||||| ||||| ||||||| |||| ||||  |||||||||||| | || ||||     
T  24083308 cttaagctcatgactacatgattgattaagattgatttgtgagttttcaaagttgaataagttatcttattttggaaattatcaatgttggtcgtttgcc 24083209  T
Q  118 acttgatacgtatttt 133  Q
    |||||||||| |||||    
T  24083208 acttgatacggatttt 24083193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 517
Target Start/End: Complemental strand, 4864057 - 4863901
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gag-gtgattgcattattgagtcct 458  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  |  ||||| |||||||| | |||||||| ||  ||  | ||||||||||||  |    
T  4864057 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgtcgtcctatatattgtggagaaaattgtgattgttgtcgcattattgagtt-t 4863959  T
Q  459 tactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    || |  |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  4863958 tattacatgtccatgcatcataatcgtgttgagatt-gtagttgtaaaagggttgaact 4863901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 13794062 - 13794016
Alignment:
Q  260 ctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    |||||||||||||||||||||| || || | ||||||||||||||||    
T  13794062 ctcttacttggaatatgagaaacaaatggatcagtgagattatatga 13794016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 517
Target Start/End: Original strand, 27185204 - 27185360
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgcattattgagtcct 458  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||    |||||| |||||||| |||| ||||| ||  ||  | ||||||| |||| ||    
T  27185204 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtattgtcctatatattgtggtgagaattgtgattgttgtcgcattatcgagt-ct 27185302  T
Q  459 tactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |  |  |||| ||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  27185303 tgttacatgttcatgcatcatagtcatgttgag-attgtagttgtaaaagggttgaact 27185360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 433
Target Start/End: Original strand, 1170018 - 1170103
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  | | |||| |||||||  |||||||||    
T  1170018 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggtgttctcctatatattgaggtgaaaatt 1170103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 16535096 - 16535023
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  16535096 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 16535023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 19498589 - 19498529
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||  | |||||| |||||||    
T  19498589 tttcttgataatgc-aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 19498529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 21392979 - 21392906
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||    |||||| |||||||  ||||||||||    
T  21392979 tttcttgataatgcaaatgttgtggagataatcaatataattgggttttgtcctatatattgaggtgaaaattg 21392906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 21652772 - 21652845
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||||||||| || ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  21652772 tttcttgataatgcaaatgttgtggaaataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 21652845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 35792622 - 35792695
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  35792622 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 35792695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 25425687 - 25425639
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||| |||||||||||||||||||| |  |||||||| ||||    
T  25425687 ttggatatgatgtttatcatgagatgttgtatgttatcttacttagaat 25425639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 37958407 - 37958590
Alignment:
Q  332 tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||     
T  37958407 tttatgaccggaatgttgtatggacgtaatttcttgataatgcaaatgttgtagagatgatcaatatatttggaagttgtcctttgtattgttgtgaaag 37958506  T
Q  432 ttggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  37958507 ttggaggtgattgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 37958590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 34197515 - 34197698
Alignment:
Q  332 tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    ||||||||  |||||||||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||     
T  34197515 tttatgactggaatgttgtatggatgtaatttcttgataatgcaaatgttgtggagatgaccaatatatttggaagttgtcctttatattgttgtgaaag 34197614  T
Q  432 ttggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  34197615 ttggaggtgattgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 34197698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 15852679 - 15852849
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15852679 atgttgtgtggacgtaatttcttgataatgcaaatgttgtagagatgatcaatatatttggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 15852777  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||||||||||| ||| ||||||||||| ||| | ||||||||| |||||||||||||||||||||    
T  15852778 gcattgttgagtccttacttgtttgtccatgcatcatagtaatgttgagtcttgtagttgtaaaagggttga 15852849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 342 - 517
Target Start/End: Complemental strand, 27959839 - 27959665
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga 441  Q
    ||||||||| ||||||||||||||||| ||||| || || |||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||||    
T  27959839 gaatgttgtgtggacgtaatttcttgataatgcaaacgtagtggagatgatcaatataattggaagttgtcctttatattgttgtgataatt-gaggtga 27959741  T
Q  442 ttgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    | ||||| ||||||||||| |||| |||||||||| ||| ||||||||||| |||||||||||||| |||||||||    
T  27959740 tggcattgttgagtccttattgtacgtccatgcatcatagtcatgttgagtcttgtagttgtaaaaaggttgaact 27959665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 41167286 - 41167467
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||| |    
T  41167286 ttatgacttgaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttgaaagttgtcatttatattgctgtgaaagt 41167385  T
Q  433 tggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    | |||||||||||||| |||||||||||| || |||||||||||| ||| ||||||||| | |||| ||||||||||||||||    
T  41167386 t-gaggtgattgcattgttgagtccttacttgcatgtccatgcatcatagtcatgttgactcttgtggttgtaaaagggttga 41167467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 333 - 512
Target Start/End: Original strand, 12245602 - 12245783
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||| | | ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  12245602 ttatgacttgaatgttgtgtggacgtaattacttgataatgcaattattgaggagacgatcaatatatttggaagatgtcctttatattgttgtgaagat 12245701  T
Q  433 tggaggtga-ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggtt 512  Q
    ||||||||| ||||||| || ||| ||||| ||||||||||||||| ||| ||||||||||| ||||| |||||||||||||    
T  12245702 tggaggtgatttgcattgtttagttcttacttgtatgtccatgcatcatagtcatgttgagtcttgtatttgtaaaagggtt 12245783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 342 - 442
Target Start/End: Original strand, 43282738 - 43282839
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtg 440  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  43282738 gaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtgaaaattgtgaggtg 43282837  T
Q  441 at 442  Q
    ||    
T  43282838 at 43282839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 149 - 290
Target Start/End: Original strand, 7187037 - 7187180
Alignment:
Q  149 ttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgttggatatgatatttatcatgag 247  Q
    |||||| | ||| |||||||||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||||||||||| ||||| ||    
T  7187037 ttttagcctattatcttataatctttcgtgactagccttatatgactagatgaaggtgtgtgatgaattgttagatgttggatatgatattgatcataag 7187136  T
Q  248 atgttgtatttcctc-ttacttggaatatgagaaataattgaaa 290  Q
    ||||||| ||| ||| ||| ||| || |||||||||| ||||||    
T  7187137 atgttgtgttttctcgttatttgtaacatgagaaatatttgaaa 7187180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 15014397 - 15014527
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| ||||||  |||||| ||||||||||||| || |||||||||| ||||||| |||||||| | ||||||||||||||||||||||| || |||||    
T  15014397 caattatcttatggtctttcttgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttggatatgatatttatcataagttgttg 15014496  T
Q  254 tatttcctc-ttacttggaatatgagaaata 283  Q
    ||||| ||| |||||||||||||||||||||    
T  15014497 tattttctctttacttggaatatgagaaata 15014527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 140 - 283
Target Start/End: Complemental strand, 18275898 - 18275753
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgata 236  Q
    |||||||||||||| | ||||| |||||| ||||||||||||||||||||| || ||||||||||  |||||| |||||||| | | |||| ||||||||    
T  18275898 aaatgattcttttaagccaattatcttatgatctttcgtgactagccttatatgactaaatgaagaggtgtgaatgaattgttatacgttg-atatgata 18275800  T
Q  237 tttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||| ||||||||||| | ||||||||| ||||||||||||||    
T  18275799 tttatcataagatgttgtatgttctcttacttagaatatgagaaata 18275753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 345 - 508
Target Start/End: Original strand, 41257709 - 41257876
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| |||| |||| | ||||| ||||| | ||| || ||||||||||||||| ||||||| | |||||||||||||||||||||||  |||||||      
T  41257709 tgttgtgtggatgtaaatacttgataatgcaattgtggttgagatgatcaatataattggaagttatcctttatattgttgtgaaaattatgaggtgatt 41257808  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  41257809 ttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaag 41257876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 382 - 517
Target Start/End: Complemental strand, 14900247 - 14900113
Alignment:
Q  382 gtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcattatac 481  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| |  || |   ||||||| | ||||| || || ||||||||||||| |||     
T  14900247 gtggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaattgagatgatgttgcattgtcgagtctttgctatatgtccatgcatcatag 14900148  T
Q  482 tcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||| |||| ||||||||||||||||||||||||    
T  14900147 tcatgt-gagtcttgtagttgtaaaagggttgaact 14900113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 34394245 - 34394101
Alignment:
Q  138 ggaaatgattc-ttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgat-gaattgt-agatgttggatatga 234  Q
    ||||||||||| ||||||  ||||||||| |||||||||||||||||||| || || |||| || || | |||||| |||| || | |||||||||||||    
T  34394245 ggaaatgattccttttagcgaattgtcttgtaatctttcgtgactagcct-atatgactaagtggagatatgtgattgaatggttacatgttggatatga 34394147  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    | |||||||||||||||||| || ||||||||||||||||||||||    
T  34394146 tgtttatcatgagatgttgttttccctcttacttggaatatgagaa 34394101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 5684080 - 5684156
Alignment:
Q  205 tgtgtgatgaattgtagatgttggatatgatattt-atcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  5684080 tgtgtgatgaattgtagatgttgaatatgatattttatcatgagatgttgttttccctcttacttggaatatgagaa 5684156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 19019394 - 19019324
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  19019394 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgaga 19019324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 434
Target Start/End: Original strand, 52266825 - 52266913
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||| ||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||| | |||| |||||||| ||||||||||    
T  52266825 gttgtgtggacgtaatttcttgataatgcaattgttgtagagatgatcaatatatttggaagttatcctctatattgtggtgaaaattg 52266913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 8373435 - 8373364
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  8373435 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttctctcttacttggaatatgagaa 8373364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 18294350 - 18294421
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  18294350 tgatgaattctagatgttgaatatgatatttatcttgagatgttgttttccctcttacttggaatatgagaa 18294421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 47356300 - 47356229
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  47356300 tgataaattgtagatgttgaatataatatttatcatgagatgttgttttccctcttacttggaatatgagaa 47356229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 18495777 - 18495850
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  18495777 tttcttgataatgcaaatgttgtgaagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 18495850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 34197370 - 34197434
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||    
T  34197370 tgttggatatgatatttatcataagatgttgtatgttctcttacttggaatatgagaaatgattg 34197434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 34394024 - 34393960
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  34394024 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaat 34393960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 14995153 - 14995098
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  14995153 ttggatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 14995098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 41257463 - 41257570
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgata 236  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||||||||    |||||||||| |||||| |||||||| || |||||||||||||||    
T  41257463 aaatgattcttttaagtcaattatcttatgatctttcgtgactagccttatacaactaaatgaagatgtgtgaatgaattgttatatgttggatatgata 41257562  T
Q  237 tttatcat 244  Q
     |||||||    
T  41257563 attatcat 41257570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 50221073 - 50221188
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-tt 264  Q
    |||||||||||||||||||||| || |||||||||| | |||| |||||||| ||| ||||  |||||||||||||||| || ||||| |||| ||| ||    
T  50221073 aatctttcgtgactagccttatatgactaaatgaagatatgtgaatgaattgttaggtgtttaatatgatatttatcataaggtgttgcattttctcttt 50221172  T
Q  265 acttggaatatgagaa 280  Q
    ||||||||||||||||    
T  50221173 acttggaatatgagaa 50221188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 8373316 - 8373258
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  8373316 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 8373258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 15043712 - 15043611
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttgcattattgagtccttactgtatgtccatgc 474  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||  | ||||||| ||||| || ||  ||||||||||    
T  15043712 tgttgtggagatgatcaatatatttgaaagttgtcctctatattgttgtgaaaattgtgaggtgatgtcgcattatcgagtctttgctacatgtccatgc 15043613  T
Q  475 at 476  Q
    ||    
T  15043612 at 15043611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 476
Target Start/End: Original strand, 15110712 - 15110813
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttgcattattgagtccttactgtatgtccatgc 474  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||||  | ||||||| ||||| || ||  ||||||||||    
T  15110712 tgttgtggagatgatcaatatatttgaaagttgtcctctatattgttgtgaaaattgtgaggtgatgtcgcattatcgagtctttgctacatgtccatgc 15110811  T
Q  475 at 476  Q
    ||    
T  15110812 at 15110813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 44054710 - 44054636
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattgg 435  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| |||||||||||    
T  44054710 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgg 44054636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 15212305 - 15212245
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||| ||||    
T  15212305 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgataaat 15212245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 19999485 - 19999430
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  19999485 ttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 19999430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 7133645 - 7133703
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  7133645 atgttggttatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 7133703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 9294486 - 9294428
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||| ||||    
T  9294486 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatattagaa 9294428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 284
Target Start/End: Original strand, 12245404 - 12245517
Alignment:
Q  172 tttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtag-atgttggatatgatatttatcatgagatgttgtatttcctcttacttg 269  Q
    |||||||||||||||||| || ||||||||||  ||| || ||| |||| | |||||| |||||||||||||||| ||||||||||| | ||||||||||    
T  12245404 tttcgtgactagccttatatgactaaatgaagaagtgggaatgacttgttgtatgttg-atatgatatttatcataagatgttgtatgttctcttacttg 12245502  T
Q  270 gaatatgagaaataa 284  Q
      |||||||||||||    
T  12245503 agatatgagaaataa 12245517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 13810987 - 13811073
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| | ||||||||| ||||  | ||||||||| || ||||||||||||||||| |||||| |||||||| ||||||||||    
T  13810987 tgtatggacatgatttcttgataatggaattgttgtggaaataatcaatatatttggaagttgtcctctatattgtggtgaaaattg 13811073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 14950980 - 14950922
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  14950980 atgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 14950922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 15273955 - 15274013
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  15273955 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 15274013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 18167752 - 18167694
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||    
T  18167752 atgttggatatgatatttatcatgatatgttgttttccctattacttggaatatgagaa 18167694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 13810612 - 13810875
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctac 119  Q
    |||||||| ||||||||||||||||||| ||||  ||| || |||  ||||||   | ||| |||| ||||||  |||||||||||| | || |||  ||    
T  13810612 cttaagctcatgattacatgattgattaagattgtttgagaactttcaacttgtctatgttgttttgtcttggggattatcaatgttggtcgtttgtcac 13810711  T
Q  120 ttgatacg-tatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaat 216  Q
    |||||||| |||| |    ||||||| |||||||| |||||||||||||| || | |||||||||  ||||| || |||| ||||| ||| || ||||||    
T  13810712 ttgatacggtattgtc---ggaaatggttcttttaagtcaattgtcttatgatttatcgtgactattcttatatgactaagtgaagttgtatggatgaat 13810808  T
Q  217 tgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
      | | |||||||||||||| ||||||||| |||||||||| | || |||||| |||| | ||||||    
T  13810809 gattatatgttggatatgatgtttatcatgggatgttgtatgttcttttacttagaatgtaagaaat 13810875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 15288204 - 15288263
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  15288204 atgttgaatatgatatttatcatgagatgttgtttttccctattacttggaatatgagaa 15288263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 26678996 - 26678937
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  26678996 atgttgaatatgatatttatcatgagatgttgtttttccctattacttggaatatgagaa 26678937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 276
Target Start/End: Original strand, 18110048 - 18110102
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatg 276  Q
    ||||||||||||||| || |||||||||||||||| | |||||||||||||||||    
T  18110048 atgttggatatgataattgtcatgagatgttgtatgttctcttacttggaatatg 18110102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 18247149 - 18247091
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||| | |||||||||    
T  18247149 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttaggatatgagaa 18247091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 22355760 - 22355818
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||  || ||||||||||||||||||    
T  22355760 atgttgaatatgatatttatcatgagatgttgttttctctattacttggaatatgagaa 22355818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 10487629 - 10487573
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  10487629 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 10487573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 16329122 - 16329178
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  16329122 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 16329178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 19822826 - 19822910
Alignment:
Q  131 ttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaa 215  Q
    |||||| |||||||| | |||||| ||||||||| ||||||||||||||| |   ||||||| |||||||||| | |||||||||    
T  19822826 ttttaccggaaatgagtattttagccaattgtctcataatctttcgtgaccaattttatgtgactaaatgaagatatgtgatgaa 19822910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 15043898 - 15043844
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||    
T  15043898 gatatgatatttatcataagatgtt-tatgttctcttacttggaatatgagaaata 15043844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 15110526 - 15110580
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||||    
T  15110526 gatatgatatttatcataagatgtt-tatgttctcttacttggaatatgagaaata 15110580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 15295314 - 15295373
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||    
T  15295314 atgttgaatatgatatttatcatgagatgctgtttttccctattacttggaatatgagaa 15295373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 14502797 - 14502857
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  14502797 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 14502857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 53706160 - 53706233
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  53706160 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 53706233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 53909140 - 53909213
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  53909140 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctgtatattgaggtgaaaattg 53909213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 9794302 - 9794243
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| |||||||||||    
T  9794302 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaat 9794243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 18109902 - 18109954
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    ||||||||||||||||| ||||||| |||| || ||| |||||||||||||||    
T  18109902 ttggatatgatatttataatgagatattgttttccctattacttggaatatga 18109954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 517
Target Start/End: Original strand, 21960938 - 21961095
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga--ggtgattgcattattgagtcc 457  Q
    |||||||| ||||| |||| ||||||||||||||||||| |    || |||||| |||||||| |||||||||| ||   ||  ||||||||| |||| |    
T  21960938 tttcttgataatgcaaatgatgtggagatgatcaatataatcaagagttgtcctatatattgtggtgaaaattgtgaattgttgttgcattatcgagt-c 21961036  T
Q  458 ttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  21961037 ttgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 21961095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 43282481 - 43282589
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatga 234  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||| ||||| | || ||||||| || |||||| |||||||| ||  | ||||||||||    
T  43282481 ggaaatggttcttttaagccaattatcttatgatctttcgtgacttgccttgtatgactaaatggagatgtgtgaatgaattgttatgttttggatatga 43282580  T
Q  235 tatttatca 243  Q
    |||||||||    
T  43282581 tatttatca 43282589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 7133806 - 7133892
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  7133806 tgtatggacatgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 7133892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 19822931 - 19822973
Alignment:
Q  246 agatgttgtatttcctcttacttggaatatgagaaataattga 288  Q
    ||||||||||| | |||||||||||||||||||||||| ||||    
T  19822931 agatgttgtatattctcttacttggaatatgagaaatatttga 19822973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 30233901 - 30233987
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| ||||| |  ||||||||||    
T  30233901 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatatcgaggtgaaaattg 30233987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 34197294 - 34197340
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactag 183  Q
    |||||||||||||||| | |||||||||||| |||||||||||||||    
T  34197294 ggaaatgattcttttaagccaattgtcttatgatctttcgtgactag 34197340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 34393854 - 34393768
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| || || |||| ||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||||    
T  34393854 tgtatggacatgttttcttgataaagcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattg 34393768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 38763989 - 38763883
Alignment:
Q  19 acttaagcttatgattacatgattgattatgatttc-ttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgc 116  Q
    |||||||||  ||||||||| |||||||| ||||   ||||||| ||||||||||||| |||||| ||||| ||||  |||||||||||| || | ||||    
T  38763989 acttaagctcttgattacataattgattaagattgagttgtgagtcttcaaacttgaataagttactttattttgggaattatcaatgttggctgtttgc 38763890  T
Q  117 tacttga 123  Q
     ||||||    
T  38763889 cacttga 38763883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 8873864 - 8873937
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||| |||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  8873864 tttcttgataatgcaaattttgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 8873937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 12901142 - 12901215
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||||||||||| ||||  |  ||||| |||||||  ||||||||||    
T  12901142 tttcttgataatgcaaatgatgtggagatgatcaatataattgggtgtcgtcctatatattgaggtgaaaattg 12901215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 426
Target Start/End: Original strand, 47469691 - 47469772
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgt 426  Q
    |||||| ||||||||| | ||||| ||||| |  ||||| ||| ||||||||||| ||||| | | ||||||||||||||||    
T  47469691 tgttgtgtggacgtaaatacttgataatgcaatcgttgtcgaggtgatcaatataattggaggttatcctttatattgttgt 47469772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 273
Target Start/End: Original strand, 7133541 - 7133589
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    ||||||||||| |||||||||||||||||||| |  |||||||| ||||    
T  7133541 ttggatatgatgtttatcatgagatgttgtatgttatcttacttagaat 7133589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 251
Target Start/End: Original strand, 8873745 - 8873773
Alignment:
Q  223 tgttggatatgatatttatcatgagatgt 251  Q
    |||||||||||||||||||||||||||||    
T  8873745 tgttggatatgatatttatcatgagatgt 8873773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 322 - 514
Target Start/End: Original strand, 21199507 - 21199701
Alignment:
Q  322 ctcttaattgttt-atgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatat 420  Q
    ||||||||||||| |||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21199507 ctcttaattgttttatgactggaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatat 21199606  T
Q  421 tgttgtgaaaattggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||| || |||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  21199607 tgttgtgaaagtttgaggtgattgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 21199701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 336 - 514
Target Start/End: Original strand, 31195633 - 31195812
Alignment:
Q  336 tgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattgg 435  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||| ||||    
T  31195633 tgaccggaatgttgtatggacgtaatttcttgataatgcaaatgttgcggagataatcaatatatttggaagttgtcctttatattgttgtgaaatttgg 31195732  T
Q  436 aggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||    
T  31195733 aggtgattgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaaaggttga 31195812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 322 - 514
Target Start/End: Original strand, 21192080 - 21192274
Alignment:
Q  322 ctcttaattgttt-atgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatat 420  Q
    ||||||||||||| |||||  |||| |||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| |||| |||||||    
T  21192080 ctcttaattgttttatgactggaatattgtgtggacgtaatttcttgataatacaaatgttgtggagatgatcaatatatttggaagttgtcatttatat 21192179  T
Q  421 tgttgtgaaaattggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||| || |||||||||||||| |||||||||||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||||||    
T  21192180 tgttgtgaaagtttgaggtgattgcattgttgagtccttacttgtatgtcaatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 21192274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 39448170 - 39448350
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  39448170 ttatgacttgaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatataatttgaagttgtcctttatattgttgtgaaaat 39448269  T
Q  433 tggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| | ||||| |||||| ||||||    
T  39448270 tgg-ggtgattgcattgttgagtccttactgtatgtccatgcatcatagtcatgttgagtctggtagtcgtaaaaaggttga 39448350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 20 - 310
Target Start/End: Original strand, 33612049 - 33612344
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggtt-gc 116  Q
    |||||||| |||| |||||||||||||| |||| | ||||||| || ||||||||||||||||| ||||  ||||  |||||||||||| |||| || ||    
T  33612049 cttaagctcatgactacatgattgattaagattattttgtgagttttcaaacttgaacaagttactttactttggaaattatcaatgttggccgttttgc 33612148  T
Q  117 tacttgatacgtatttttactggaaatgattc-ttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaa 215  Q
     |||||||||| | |||  | ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  33612149 cacttgatacggactttatc-ggaaatgattcattttagccaattgtcttataatctttcgtgactagccttatgtgactaaatgaagatgtgtgatgaa 33612247  T
Q  216 ttgtag-atgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattgaaacagtgagattatatgatgta 310  Q
    |||| | ||||||||||||||||| ||||| ||||||||| ||| ||| ||||||| ||||||||||||| ||||||   ||| | |||||||||||    
T  33612248 ttgttggatgttggatatgatattgatcataagatgttgtgttttctcgttacttgtaatatgagaaatatttgaaatgatgaaactatatgatgta 33612344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 24 - 278
Target Start/End: Original strand, 23227009 - 23227267
Alignment:
Q  24 agcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgctactt 121  Q
    ||||||||| || ||||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  23227009 agcttatgactaaatgattgattaagattgtcttgtgagctttcaaacttaaacaagttattttatcttggaaattatcaatgttagccgtttgctactt 23227108  T
Q  122 gatacgtatttttactggaaatgattc-ttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-t 219  Q
    |||| | | |||| | ||||||||  | |||||| ||||||||||| || ||||||||||||||||||||||  ||||||||| |||||||||||||| |    
T  23227109 gatatgga-ttttgccggaaatgaccctttttagccaattgtcttacaacctttcgtgactagccttatgtgattaaatgaagatgtgtgatgaattgtt 23227207  T
Q  220 agatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgag 278  Q
    ||||||||||| ||||||| ||||| ||| ||||| ||| ||| ||| ||| ||||||||    
T  23227208 agatgttggatgtgatattgatcataagaagttgtgttttctcgttatttgcaatatgag 23227267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 63 - 310
Target Start/End: Complemental strand, 23149027 - 23148781
Alignment:
Q  63 ttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttt-agtcaattg 161  Q
    ||||||||||||||||||| ||||  ||||  |||||||||||| | |  |||| |||||||||  | |||  | | ||||||||||||| || |||||     
T  23149027 ttcaaacttgaacaagttactttactttggaaattatcaatgttgggcttttgccacttgatacagactttatcag-aaatgattctttttagccaatta 23148929  T
Q  162 tcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcc 260  Q
    ||||||||| |||||| ||||  |||||||| |||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |    
T  23148928 tcttataatttttcgtaacta--cttatgtgactaaatgatgatgtgtgatgaattgttagatgttgtatatgatatttatcatgagatgttgtattttc 23148831  T
Q  261 tcttacttggaatatgagaaataattgaaacagtgagattatatgatgta 310  Q
    ||||||||||||||||||||||| ||||||  |||| | |||||||||||    
T  23148830 tcttacttggaatatgagaaatatttgaaatggtgaaactatatgatgta 23148781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 322 - 514
Target Start/End: Complemental strand, 25756787 - 25756590
Alignment:
Q  322 ctcttaattg-tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatat 420  Q
    |||||||||| ||||||||  ||||||||| ||||||||| | ||| | ||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  25756787 ctcttaattgatttatgacttgaatgttgtgtggacgtaaatactttataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatat 25756688  T
Q  421 tgttgtgaaaatt-ggaggtg--attgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||||||  ||||||  |||||||| ||||||| || | ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  25756687 tgttgtgaaaattatgaggtgatattgcattgttgagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 25756590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 342 - 514
Target Start/End: Complemental strand, 23836030 - 23835855
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaa-attggaggtg 440  Q
    ||||||||| ||||||||||| ||||| ||||| | ||||| ||| |||||||||||||||||||| | ||||||||||||||||||||  |||||||||    
T  23836030 gaatgttgtgtggacgtaattacttgataatgcaattgttgaggaaatgatcaatatatttggaagttttcctttatattgttgtgaaagtttggaggtg 23835931  T
Q  441 a-ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    | ||||||| | |||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  23835930 atttgcattgtcgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 23835855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 25294741 - 25294601
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg--attgcattattgagtccttac-tgtatgtccatg 473  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||  |||||||| ||||||| || | ||||||||||||    
T  25294741 tgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgaggtgatattgcattgttgagtctttgcttgtatgtccatg 25294642  T
Q  474 cattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||| ||| ||||||||||| |||||||||||||||||||||    
T  25294641 catcatagtcatgttgagtcttgtagttgtaaaagggttga 25294601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 95 - 283
Target Start/End: Complemental strand, 15932449 - 15932260
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| |||| |||| |||||||| | |||||  | |||||||||||||||| | ||||| |||||| || |||||||||||||||||| ||     
T  15932449 attatcaatgttggccgtttgccacttgatatggattttatc-ggaaatgattcttttaagccaattatcttatgatatttcgtgactagccttatatga 15932351  T
Q  194 ctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||| |||| ||||||| |||||||| | || ||| |||||||||||||||| ||||||||||| | ||||||||||| ||||||||||||    
T  15932350 ctaaacgaagatgtgtgaatgaattgttatatattg-atatgatatttatcataagatgttgtatgttctcttacttggcatatgagaaata 15932260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 21696364 - 21696193
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttg 444  Q
    ||||||| | || |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||| | || |   |||  |||    
T  21696364 tgtatgggcatattttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaatactgtggattgatgttg 21696265  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||| |||| |||  |   ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  21696264 cattatcgagt-cttgttacgtgtccatgcatcatagtcatgttgagttttgtagttgtaaaagggttgaact 21696193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 37654990 - 37655168
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||||| | ||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||    
T  37654990 ttatgacttgaatgttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatgtggaagttatcctttatactgttgtgaaaat 37655089  T
Q  433 tggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    |    ||||  ||||||| |  |||| || | ||||||||||||||| ||| ||||||||||| |||||| ||||||||    
T  37655090 tatgagtgattttgcattgtatagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgtagctgtaaaag 37655168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 345 - 434
Target Start/End: Original strand, 18768119 - 18768208
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||| ||||||||||||||||| ||||| | ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||    
T  18768119 tgttgtgtggacgtaatttcttgataatgcaattgttgtggagatgataaatatatttggaagttgtcctctatattgtggtgaaaattg 18768208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13663819 - 13663890
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  13663819 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 13663890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13723094 - 13723165
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  13723094 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 13723165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 17151331 - 17151402
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  17151331 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 17151402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13722354 - 13722425
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  13722354 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 13722425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13722502 - 13722573
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  13722502 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 13722573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13722650 - 13722721
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  13722650 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 13722721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13722798 - 13722869
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  13722798 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 13722869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 13722946 - 13723017
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  13722946 tgatgaattgtggatgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 13723017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 23836239 - 23836101
Alignment:
Q  169 atctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttac 266  Q
    ||||||||||||||||| ||| || |||||||||| ||||||| ||| |||| | |||||| |||||||||||||||| ||||||| ||| | |||||||    
T  23836239 atctttcgtgactagccgtatatgactaaatgaagatgtgtgaatgacttgttatatgttg-atatgatatttatcataagatgttatatgttctcttac 23836141  T
Q  267 ttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    ||||||||||| ||| || || | | ||||||||||||||    
T  23836140 ttggaatatgaaaaacaaatggatcggtgagattatatga 23836101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 37654625 - 37654893
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    ||||||||  ||||||||||||||  || |||| | ||||||| || |||||||||| | ||||  || | ||||  ||||||||||||  ||| ||||     
T  37654625 cttaagctcttgattacatgattgtataagattattttgtgagttttcaaacttgaatatgttaccttgttttgggaattatcaatgttgcccgtttgcc 37654724  T
Q  118 acttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaa 215  Q
    |||||||| | |||||  | |||| || |||||||| | ||| | |||||| ||||||||||||||||||||| || |||||||| |  |||||| || |    
T  37654725 acttgatatggattttatcgggaa-tgtttcttttaagccaaatatcttatgatctttcgtgactagccttatatgactaaatgatgacgtgtgaatgga 37654823  T
Q  216 ttgtag-atgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    ||||   |||||| |||||||||||||||| || |||||||||| ||| |||||||||||||||||||||    
T  37654824 ttgttctatgttgaatatgatatttatcataaggtgttgtattttctctttacttggaatatgagaaata 37654893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 224344 - 224415
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||| |||||| ||||    
T  224344 tgatgaattgtagatgttgaatataatatttatcatgagatgttgttttccctcttacttagaatataagaa 224415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 737967 - 738038
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||| |||||| ||||    
T  737967 tgatgaattgtagatgttgaatataatatttatcatgagatgttgttttccctcttacttagaatataagaa 738038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 861862 - 861933
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || |||||||||| |||||| ||||    
T  861862 tgatgaattgtagatgttgaatataatatttatcatgagatgttgttttccctcttacttagaatataagaa 861933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 17151450 - 17151533
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatg 305  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |  |||||| ||||| | ||||||    
T  17151450 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaattgtttgaaatagtgaaactatatg 17151533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 18618142 - 18618071
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||| | || | ||||||||||||||||||||    
T  18618142 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttattttccttcttacttggaatatgagaa 18618071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 364 - 510
Target Start/End: Complemental strand, 23148682 - 23148532
Alignment:
Q  364 cttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga--ttgcattattgagtcctta 460  Q
    ||||| ||||| |||||||| ||| ||||||||||| ||||||| |||||||||||||||| |||  |||  ||| |||  ||||||| | ||||| |||    
T  23148682 cttgataatgcaaatgttgttgaggtgatcaatataattggaagttgtcctttatattgttttgattattatgagatgatgttgcattgtcgagtcttta 23148583  T
Q  461 c-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    | ||||||||||||||| ||| ||||||||||| |||| | ||||||||||    
T  23148582 cttgtatgtccatgcatcatagtcatgttgagtcttgtggctgtaaaaggg 23148532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 20568623 - 20568709
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  20568623 tgtatggacatgctttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 20568709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 20574816 - 20574902
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  20574816 tgtatggacatgctttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 20574902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 20655380 - 20655466
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  20655380 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 20655466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 24107781 - 24107839
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  24107781 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 24107839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 280
Target Start/End: Complemental strand, 26010561 - 26010374
Alignment:
Q  93 ttattatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgt 191  Q
    |||| ||||||||| |||| |||| |||||||| | |||||  | | |||||||| ||||| | ||||| |||||| ||||||||| ||||||||||| |    
T  26010561 ttatcatcaatgttggccgtttgccacttgatatgaattttatc-gaaaatgatttttttaagccaattatcttatgatctttcgttactagccttatat 26010463  T
Q  192 gtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    | |||| || || ||||||| |||||||| | |||||| ||||||| |||||||| ||||||||||| | |||||||| ||||||||||||    
T  26010462 gactaattggagatgtgtgaatgaattgttatatgttg-atatgat-tttatcataagatgttgtatgttctcttactgggaatatgagaa 26010374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 24718613 - 24718670
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  24718613 tgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 24718670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 28543726 - 28543653
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||| |||||||| |||| |||||    
T  28543726 tttcttgataatgcaaatgttgtggagatgatcaatatatgtggaagttgtcctctatattgtggtgataattg 28543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 434
Target Start/End: Original strand, 22737235 - 22737323
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||| ||||||||||||||||  |||||   ||| |||||||||||||||||||||||||| |||||| ||||| || ||||||||||    
T  22737235 gttgtgtggacgtaatttcttggtaatgcatttgtggtggagatgatcaatatatttggaagttgtcctctatatggtggtgaaaattg 22737323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 700757 - 700828
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || ||| |||||| |||||| ||||    
T  700757 tgatgaattgtagatgttgaatataatatttatcatgagatgttgttttcccttttactttgaatattagaa 700828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 3432775 - 3432830
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  3432775 ttggatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 3432830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 423
Target Start/End: Original strand, 17730821 - 17730896
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgt 423  Q
    ||||||||| |  |||||||  ||||| |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  17730821 tgtatggacatgttttcttgttaatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgt 17730896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 33171317 - 33171202
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctc-tt 264  Q
    ||||||||||||||||||||   || |||||||||| | ||||| |||||||| || ||||| |||||||||||||||| || ||||| |||| ||| ||    
T  33171317 aatctttcgtgactagccttgcatgactaaatgaagatatgtgaatgaattgttaggtgttgaatatgatatttatcataaggtgttgcattttctcttt 33171218  T
Q  265 acttggaatatgagaa 280  Q
    ||||||||||||||||    
T  33171217 acttggaatatgagaa 33171202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 6775426 - 6775484
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  6775426 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggtatatgagaa 6775484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 24930309 - 24930367
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  24930309 atgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 24930367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 28836556 - 28836498
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  28836556 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 28836498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 38636650 - 38636889
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| || |||||||||||||||| ||||   |||||||  |||||||||||| |||||| ||||| ||||  |||||||||||| |||| ||||     
T  38636650 cttaagctcataattacatgattgattaagattgagttgtgagttttcaaacttgaataagttactttattttgggaattatcaatgttggccgtttgcc 38636749  T
Q  118 acttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaatt 217  Q
    |||||||||| | |||   |  |||||||||||| || ||| |  |||||||||||| |||| |||  |||| ||  | ||||||| | |||||  ||||    
T  38636750 acttgatacggacttt--atcaaaatgattctttgagccaaataccttataatcttttgtgattagttttatatgattgaatgaagatatgtgagtaatt 38636847  T
Q  218 gt-agatgttggatatgatatttatcatgagatgttgtattt 258  Q
    || || | ||| |||||||||||||||| || ||||||||||    
T  38636848 gtgaggtattgaatatgatatttatcataaggtgttgtattt 38636889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 279
Target Start/End: Complemental strand, 17284311 - 17284180
Alignment:
Q  148 cttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatg 245  Q
    |||| |||||||| |||||| | |||| ||||||||| | || || |||||||||| ||| ||| |||||||| | |||||| |||||||||  ||||||    
T  17284311 ctttaagtcaattatcttatgaccttttgtgactagcttcatttgactaaatgaagatgtatgaatgaattgtgacatgttg-atatgatatg-atcatg 17284214  T
Q  246 agatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||| | ||||||||||||||||||||    
T  17284213 agatgttgtatgttctcttacttggaatatgaga 17284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 20648808 - 20648881
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || ||| || |||||||| ||||||||||    
T  20648808 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgttctatatattgtggtgaaaattg 20648881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 25121332 - 25121259
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||||| |||||| |||||||  ||||||||||    
T  25121332 tttcttgataatgcaaatgttgtggagataatcaatataattggaagttgtcctatatattgaggtgaaaattg 25121259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 506
Target Start/End: Complemental strand, 33171084 - 33170905
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttg-tgaaaa 431  Q
    |||||||| || |||||| ||||||||| | ||||| ||||| | |||||| ||| ||||||||||| ||||| | | ||||||||||||||| |||| |    
T  33171084 ttatgacctgattgttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggctatcctttatattgttgttgaata 33170985  T
Q  432 tt--ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaa 506  Q
    ||   |||||||  ||||||| | ||||| || | | ||||||||||||| ||||||||||||||| |||  ||||||||    
T  33170984 tttatgaggtgattttgcattgtcgagtctttgcttttatgtccatgcatcatactcatgttgagtcttgatgttgtaaa 33170905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 38532422 - 38532377
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgt 423  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  38532422 tgttgtggagatgatcaatatatttggaagttgtcctttatattgt 38532377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 18042651 - 18042766
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctct-t 264  Q
    ||||||||||||||||| |||| ||  ||||||||| | ||||| |||||||| || ||||| |||||||||||||||| || |||||||||| ||||      
T  18042651 aatctttcgtgactagctttatatgattaaatgaagatatgtgaatgaattgttaggtgttgaatatgatatttatcataaggtgttgtattttctctaa 18042750  T
Q  265 acttggaatatgagaa 280  Q
    |||||||||| |||||    
T  18042751 acttggaatacgagaa 18042766  T

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Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 434
Target Start/End: Complemental strand, 21679990 - 21679919
Alignment:
Q  363 tcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||| ||||| ||||| |||||||||| ||||||||||||||| |||| | |||||||| ||||||||||    
T  21679990 tcttgataatgcaaatgtggtggagatgaacaatatatttggaagttgtcatctatattgtggtgaaaattg 21679919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 37610169 - 37610000
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| || |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  | ||    
T  37610169 tgtatggacatattttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtgattgttgtcgc 37610070  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||| |||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  37610069 attatcgagt-cttgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 37610000  T

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Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 16040555 - 16040613
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || | | ||||||||||||||||||    
T  16040555 atgttgaatatgatatttatcatgagatgttgttttccttattacttggaatatgagaa 16040613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 22908679 - 22908737
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||| |||||||||||| |||| ||||||||||| | |||||||||||||||||||||    
T  22908679 atgttagatatgatatttgtcataagatgttgtatgttctcttacttggaatatgagaa 22908737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 345 - 510
Target Start/End: Original strand, 33612416 - 33612585
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| ||||||| | | ||| | ||||| | |||||| ||| ||||||||||| ||||||| ||||||||||||||||||||  |||  ||| |||      
T  33612416 tgttgtgtggacgtgaatacttaataatgcaattgttgttgaggtgatcaatataattggaagttgtcctttatattgttgtgattattatgagatgatg 33612515  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    ||||||| | ||||| || | |||||| |||||||| ||| ||||||||||| |||||| | ||||||||    
T  33612516 ttgcattgtcgagtctttgcttgtatgcccatgcatcatattcatgttgagtcttgtagctttaaaaggg 33612585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 5237154 - 5237098
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  5237154 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 5237098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 16040452 - 16040504
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    |||||||||||||||||||||||||||||| || | | |||||||||||||||    
T  16040452 ttggatatgatatttatcatgagatgttgttttccatattacttggaatatga 16040504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 16042235 - 16042287
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    |||||||||||||||||||||||||||||| || | | |||||||||||||||    
T  16042235 ttggatatgatatttatcatgagatgttgttttccatattacttggaatatga 16042287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 24662444 - 24662500
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  24662444 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 24662500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 43684613 - 43684557
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  43684613 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 43684557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 517
Target Start/End: Complemental strand, 37605782 - 37605626
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgcattattgagtcct 458  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  | ||||||| |||| ||    
T  37605782 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtgattgttgtcgcattatcgagt-ct 37605684  T
Q  459 tactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  37605683 tgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 37605626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 16040777 - 16040837
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  16040777 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 16040837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 16417050 - 16416977
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  16417050 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 16416977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 22908853 - 22908926
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  22908853 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 22908926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 45560580 - 45560657
Alignment:
Q  352 tggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaa 429  Q
    ||||||||| | ||||| ||||| | |||||| ||| ||||||||||| ||||| | | |||||||||||||||||||    
T  45560580 tggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgtgaa 45560657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 18042918 - 18042997
Alignment:
Q  347 ttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgt 426  Q
    |||| ||||||||| | ||||| ||||| | |||||| ||| ||||||||||| ||||| | | ||||||||||||||||    
T  18042918 ttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgt 18042997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 38532624 - 38532578
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttactt 268  Q
    |||||||||||||| ||||||||| |||||||||| | |||||||||    
T  38532624 atgttggatatgatgtttatcatgggatgttgtatgttctcttactt 38532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 16042453 - 16042513
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||| ||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  16042453 atgttggttatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 16042513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 22885512 - 22885452
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||  ||||||||||||    
T  22885512 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttgatatatgagaaata 22885452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 24718786 - 24718847
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||    
T  24718786 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 24718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 21696526 - 21696467
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||    
T  21696526 atgttggatatgatgtttatcatgagatg-tgtatgttctcttacttagaatgtaagaaat 21696467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 462 - 510
Target Start/End: Original strand, 23153285 - 23153333
Alignment:
Q  462 tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    ||||||||||||||| ||| ||||||||||| |||| | ||||||||||    
T  23153285 tgtatgtccatgcatcatagtcatgttgagtcttgtggctgtaaaaggg 23153333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 4e-67; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 322 - 514
Target Start/End: Complemental strand, 19602011 - 19601818
Alignment:
Q  322 ctcttaattgtttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatatt 421  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  19602011 ctcttatttgtttatgaccgaaatgttgtatggacgtaatttcttgacaatgcaaatgttgtggagatcatcaatatatttggaagttgtcctttatatt 19601912  T
Q  422 gttgtgaaaattggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| ||||| | |||||||||||||||||||    
T  19601911 gttgtgaaatttggaggtgattgcattgttgagtccttacttgtatgtccatgcatcatagtcatgctgagtctggtagttgtaaaagggttga 19601818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 38034980 - 38035150
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  38034980 atgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 38035078  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||||||||||| ||||||| ||||||| ||| |||||| |||| |||||||||||||||||||||    
T  38035079 gcattgttgagtccttacttgtatgtgcatgcatcatagtcatgtcgagtcttgtagttgtaaaagggttga 38035150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 36357696 - 36357866
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  36357696 atgttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 36357794  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||||||||||| ||||| | ||||||| ||| ||||||||||| ||||||||||||||| |||||    
T  36357795 gcattgttgagtccttacttgtatattcatgcatcatagtcatgttgagtcttgtagttgtaaaagagttga 36357866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 333 - 512
Target Start/End: Original strand, 13378106 - 13378288
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaa-a 431  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||| | ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||      
T  13378106 ttatgacttgaatgttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagatgtcatttatatttttgtgaaagt 13378205  T
Q  432 ttggaggtga-ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggtt 512  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  13378206 ttggaggtgatttgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggtt 13378288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 20 - 290
Target Start/End: Original strand, 22144376 - 22144649
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| |||||||||||||| |||| | ||||||| ||||||||||||||||||||| |||  ||||  ||||||||||||  ||| |||      
T  22144376 cttaagctcatgactacatgattgattaagattattttgtgagtcttcaaacttgaacaagttatcttactttggaaattatcaatgttgaccgtttgtc 22144475  T
Q  118 acttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaatt 217  Q
    |||||||| | | |||  | ||||||||||||||| | ||||| |||||||| |||| ||||||||||||||||| ||||||| || |||||||||||||    
T  22144476 acttgatatgaactttatc-ggaaatgattctttttgccaattatcttataaccttttgtgactagccttatgtgactaaatggagatgtgtgatgaatt 22144574  T
Q  218 g-tagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattgaaa 290  Q
    | |||||||||| ||||||||| ||||| ||||||||||||| ||| ||||| | |||| |||||||| ||||||    
T  22144575 gttagatgttggttatgatattgatcataagatgttgtattttctctttactcgaaataggagaaatatttgaaa 22144649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 333 - 508
Target Start/End: Complemental strand, 21193989 - 21193810
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||||||||  | |||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  21193989 ttatgacttgaatgttgtgtggacgtaaatacttgagaatgtaattgttgtggagatgatcaatatatttggaagttatcctttatattgttgtgaaaat 21193890  T
Q  433 t-ggaggtga--ttgcattattgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
    |  |||||||  ||||||| | ||||| || || | |||||||||||| ||| |||||||||||||||||| ||||||||    
T  21193889 tatgaggtgattttgcattgtcgagtctttgctagaatgtccatgcatcatagtcatgttgagttttgtagctgtaaaag 21193810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 95 - 310
Target Start/End: Original strand, 8539018 - 8539236
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| |||| |||| |||||||| | |||||  | |||| || |||||||| | ||||| |||||| ||||||||||||||||||||| ||     
T  8539018 attatcaatgttggccgtttgccacttgatatggattttatcgggaa-tggttcttttaagccaattatcttatgatctttcgtgactagccttatatga 8539116  T
Q  194 ctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattgaaa 290  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||||||||| |  |||||||||| ||| ||||||||||||||||||||| ||| |     
T  8539117 ctaaatgaagatgtgtgaatgaattgttatatgttggatatgatatttatcataacgtgttgtattttctctttacttggaatatgagaaatatttggag 8539216  T
Q  291 cagtgagattatatgatgta 310  Q
    | |||| | |||||||||||    
T  8539217 ctgtgaaactatatgatgta 8539236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 95 - 310
Target Start/End: Original strand, 8604257 - 8604475
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| |||| |||| |||||||| | |||||  | |||| || |||||||| | ||||| |||||| ||||||||||||||||||||| ||     
T  8604257 attatcaatgttggccgtttgccacttgatatggattttatcgggaa-tggttcttttaagccaattatcttatgatctttcgtgactagccttatatga 8604355  T
Q  194 ctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattgaaa 290  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||||||||| |  |||||||||| ||| ||||||||||||||||||||| ||| |     
T  8604356 ctaaatgaagatgtgtgaatgaattgttatatgttggatatgatatttatcataacgtgttgtattttctctttacttggaatatgagaaatatttggag 8604455  T
Q  291 cagtgagattatatgatgta 310  Q
    | |||| | |||||||||||    
T  8604456 ctgtgaaactatatgatgta 8604475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 37235305 - 37235490
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||||| | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37235305 ttatgacttgaatgttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttaaattgttgtgaaaat 37235404  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  |||||||  ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| |||||| | ||||| ||||||    
T  37235405 tatgaggtgatcttgcattgtcgagtctttgcttgtatgtccatgcatcataatcatgttgagtcttgtagctataaaatggttga 37235490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 95 - 289
Target Start/End: Complemental strand, 17608054 - 17607859
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| ||||||||| |||||||| | |||||  |   || || |||||||| | ||||| |||| | ||| ||||||||||||||||| ||     
T  17608054 attatcaatgttggccggttgccacttgatatgaattttatcaa-aattgtttcttttaagccaattatcttgtgatcattcgtgactagccttatatga 17607956  T
Q  194 ctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaa 289  Q
    |||||||||| ||| ||| |||||||| | |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  17607955 ctaaatgaagatgtatgagtgaattgttatatgttg-atatgatatttatcatgagatgttgtatgttctcttacttggaatatgagaaataattgaa 17607859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 27673899 - 27673747
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||||| | || ||||||| || ||||||| |||||||| |  ||||||||||||    
T  27673899 ggaaatggttcttttaagccaattatcttatgatctttcgtgactagccttgtatgactaaatggagatgtgtgaatgaattgttatgtgttggatatga 27673800  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||||| |||||| |||| | ||||||||||||||||||||||| ||||    
T  27673799 tatttatcataagatgtcgtatgttctcttacttggaatatgagaaatgattg 27673747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 348 - 442
Target Start/End: Original strand, 20956328 - 20956423
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtgat 442  Q
    ||||||||||| ||||||||| ||||| | |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||    
T  20956328 tgtatggacgtgatttcttgataatgcaattgttgtggagatgatcaatatatttgaaagttgtcctctatattgttgtgaaaattgtgaggtgat 20956423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 156 - 282
Target Start/End: Complemental strand, 21194206 - 21194077
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| |||||||||||||||| |||| || |||||||||| |||||| |||||||| || ||||||||||||||||||||||| |  |||||    
T  21194206 caattatcttatgatctttcgtgactagctttatatgactaaatgaagatgtgtgaatgaattgatatatgttggatatgatatttatcataaagtgttg 21194107  T
Q  254 tatttcctc-ttacttggaatatgagaaat 282  Q
    ||||| ||| |||||||| |||||||||||    
T  21194106 tattttctcattacttgggatatgagaaat 21194077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 13377974 - 13378053
Alignment:
Q  227 ggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||  ||||||||||||||    
T  13377974 ggatatgatatttatcatgtgatgttgtatgttctcttacttggaatatgagaaataaatgaaatggtgagattatatga 13378053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 20253250 - 20253180
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||    
T  20253250 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgaga 20253180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 51657687 - 51657773
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| | ||||| ||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  51657687 tgtatggacatgatttcatgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattg 51657773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 346 - 491
Target Start/End: Complemental strand, 27673656 - 27673508
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtg--at 442  Q
    ||||| |||| |||||||||||| ||| | | |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||   |    
T  27673656 gttgtgtggatgtaatttcttgataatacaattgttttggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgaggtggtgt 27673557  T
Q  443 tgcattattgagtccttactgtatgtccatgcattatactcatgttgag 491  Q
     ||||||| ||||| |||||  |||| ||||||| ||| || |||||||    
T  27673556 cgcattatcgagtctttactacatgttcatgcatcatagtcgtgttgag 27673508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 283
Target Start/End: Original strand, 5471460 - 5471650
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattcttttagtcaattgtcttataa-tctttcgtgactagccttatgtgt 193  Q
    |||||||||||| | || |||| |||||||||| | |||  | ||||||| |||||| || ||||| |||||||| |||||||||||||||||  | |||    
T  5471460 attatcaatgttggtcgtttgccacttgatacggactttatc-ggaaatggttctttaagacaattatcttataactctttcgtgactagcctattatgt 5471558  T
Q  194 ctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| |||||||| ||  | ||||||||||| |||||||| || |||||||||  |||||  || ||||||||| ||||    
T  5471559 ctaaatgaaggtgtgtgaatgaattgttaagttttggatatgatgtttatcataaggtgttgtattatctctttatttgaatatgaggaata 5471650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 22353101 - 22353030
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || | ||||||||||||||||||||    
T  22353101 tgatgaattgtagatgttgaatataatatttatcatgagatgttgttttccatcttacttggaatatgagaa 22353030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 490
Target Start/End: Original strand, 8539296 - 8539457
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| |  |||| ||||| | |||||||||||||||||||||||||||||| | || |||||||||| ||||||||    
T  8539296 ttatgacttgaatgttgtgtggacgtaaatatttgataatgcaattgttgtggagatgatcaatatatttggaagttatcatttatattgtcgtgaaaat 8539395  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttga 490  Q
    |  |||||||  |||||||  |||||| || | ||||||||||||||| ||| || ||||||    
T  8539396 tatgaggtgattttgcattgctgagtctttgcttgtatgtccatgcatcatagtcgtgttga 8539457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 490
Target Start/End: Original strand, 8604535 - 8604696
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| |  |||| ||||| | |||||||||||||||||||||||||||||| | || |||||||||| ||||||||    
T  8604535 ttatgacttgaatgttgtgtggacgtaaatatttgataatgcaattgttgtggagatgatcaatatatttggaagttatcatttatattgtcgtgaaaat 8604634  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttga 490  Q
    |  |||||||  |||||||  |||||| || | ||||||||||||||| ||| || ||||||    
T  8604635 tatgaggtgattttgcattgctgagtctttgcttgtatgtccatgcatcatagtcgtgttga 8604696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 506
Target Start/End: Original strand, 5471740 - 5471904
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat-tggaggtga--t 442  Q
    ||||| ||||||||| | ||||| ||||| | ||| |||||| ||||||||||| ||||||| |||||||||||||||||||||  |   |||||||  |    
T  5471740 gttgtgtggacgtaaatacttgataatgcaattgtggtggaggtgatcaatataattggaagttgtcctttatattgttgtgaatgtcatgaggtgattt 5471839  T
Q  443 tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaa 506  Q
    |||||| | ||||| || | ||||||||||||||| ||| ||||||||||| ||| |||||||||    
T  5471840 tgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgaagttgtaaa 5471904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 168 - 289
Target Start/End: Original strand, 5769323 - 5769447
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-tt 264  Q
    |||||||||||||||||||||| || |||||||||| | |||| |||| ||| ||||||| | |||||||||||||||| || ||||| |||| ||| ||    
T  5769323 aatctttcgtgactagccttatatgactaaatgaagatatgtgaatgagttgttagatgtcgaatatgatatttatcataaggtgttgcattttctcttt 5769422  T
Q  265 acttggaatatgagaaataattgaa 289  Q
    |||||||||||||||| || |||||    
T  5769423 acttggaatatgagaagtatttgaa 5769447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 37235113 - 37235228
Alignment:
Q  169 atctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtag-atgttggatatgatatttatcatgagatgttgtatttcctcttac 266  Q
    ||||||| ||||||||||||| || |||||||||| ||||||| ||| |||| | |||||| |||||||||||||||| | ||| ||||| | |||||||    
T  37235113 atctttcatgactagccttatatgactaaatgaagatgtgtgaatgacttgttgtatgttg-atatgatatttatcataaaatgctgtatgttctcttac 37235211  T
Q  267 ttggaatatgagaaata 283  Q
    |||||||||||||||||    
T  37235212 ttggaatatgagaaata 37235228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 22365712 - 22365657
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  22365712 ttggatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 22365657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 35523796 - 35523869
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  35523796 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 35523869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 22836642 - 22836697
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  22836642 tgttgtggaaatgatcaatatatttggaagttgtcctctatattgttgtgaaaatt 22836697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 20826425 - 20826483
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  20826425 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 20826483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 20956175 - 20956243
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    |||| ||||||||| |||||||||||||||||||| | ||||||||| |||| ||||||||| ||||||    
T  20956175 atgtcggatatgatgtttatcatgagatgttgtatgttctcttacttagaatgtgagaaatacttgaaa 20956243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 35053642 - 35053473
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  | ||    
T  35053642 tgtatggacatgttttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtgattgttgtcgc 35053543  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||| |||  |  |||||||||||| ||| || |||||||  ||||||||||| ||||||||||||    
T  35053542 attattgagt-cttgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtagaagggttgaact 35053473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 16655553 - 16655452
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| ||||| ||||||||||||| | || |||||||||| ||||||| |||||||| |  |||||| ||||||||||||||| ||||||||    
T  16655553 caattatcttatgatctt-cgtgactagccttgtatgactaaatgaagatgtgtgaatgaattgttatgtgttggctatgatatttatcataagatgttg 16655455  T
Q  254 tat 256  Q
    |||    
T  16655454 tat 16655452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 21717006 - 21716920
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  ||| |||| ||||| |||||||||||||||| ||||||| |||| || |||||| |||||||| ||||||||||    
T  21717006 tgtatggacatgtttttttgataatgcaaatgttgtggagatgagcaatataattgggagttgtcctatatattgtggtgaaaattg 21716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 510
Target Start/End: Original strand, 22144768 - 22144917
Alignment:
Q  364 cttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga--ttgcattattgagtccttac 461  Q
    ||||| ||||| |||||||| ||| ||||||||||| ||| ||| |||| |||||||||||||||   || |||||||  ||||||| | ||||| || |    
T  22144768 cttgataatgcaaatgttgttgaggtgatcaatataattgaaagttgtcttttatattgttgtgactttttgaggtgatgttgcattgtcgagtctttgc 22144867  T
Q  462 -tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
     ||||||| ||||||| ||| ||||| ||||| |||| | ||||||||||    
T  22144868 ttgtatgtacatgcatcatagtcatgatgagtcttgtggctgtaaaaggg 22144917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 41393412 - 41393354
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| ||||||||||| | |||||||||||||| | |||||||||||||||||||||    
T  41393412 atgttgaatatgatatttgtgatgagatgttgtatgttctcttacttggaatatgagaa 41393354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 51451570 - 51451514
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  51451570 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 51451514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 5675977 - 5676050
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||||    
T  5675977 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattg 5676050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 22407571 - 22407644
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  22407571 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 22407644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 22836439 - 22836507
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    ||||||||||||||| || |||| |||||||||||  |||||||||| |||| ||||||| | ||||||    
T  22836439 atgttggatatgataattgtcataagatgttgtatgacctcttacttagaatgtgagaaacacttgaaa 22836507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 17022539 - 17022488
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||||||| ||||||| ||| | ||| ||||||||||||||||    
T  17022539 gatatgatatttatcataagatgttatatgttctcctacttggaatatgaga 17022488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 51657515 - 51657566
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    |||||||||||||| ||||||||||||||| |||| | ||||||||| ||||    
T  51657515 atgttggatatgatgtttatcatgagatgtcgtatgttctcttacttagaat 51657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 20176243 - 20176165
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    |||| ||||||||||||  |||||||||| | ||||||||||  ||| ||||||||| || | | ||||||||||||||    
T  20176243 gatacgatatttatcatatgatgttgtatgttctcttacttgagatacgagaaataaatggatcggtgagattatatga 20176165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 517
Target Start/End: Complemental strand, 41218240 - 41218084
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gag-gtgattgcattattgagtcct 458  Q
    |||||||| ||||| |||  ||||||||||| ||||||| ||||  |  ||||| |||||||| |||||||||| ||  ||  | ||||||| ||||| |    
T  41218240 tttcttgataatgcaaataatgtggagatgaacaatataattgggtgtcgtcctatatattgtggtgaaaattgtgattgttgtcgcattatcgagtc-t 41218142  T
Q  459 tactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |  || |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  41218141 tgttgcatgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 41218084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 49966436 - 49966375
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||    
T  49966436 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 49966375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 126; Significance: 9e-65; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 342 - 514
Target Start/End: Original strand, 4709 - 4882
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga 441  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  4709 gaatgttgtgtggacgtaatttcttgataatgctaatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtgaaaattggaggtga 4808  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||||||||||||| ||||||| ||||||| ||| ||||||||||| ||||||||||||||| |||||    
T  4809 ttgcattattgagtccttacttgtatgttcatgcatcatagtcatgttgagtcttgtagttgtaaaagagttga 4882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 78 - 281
Target Start/End: Original strand, 4427 - 4630
Alignment:
Q  78 gttattttatcttggttattatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcg 176  Q
    ||||||||  |||||  ||| ||||||||  |||||||  |||||||||| ||||  || | |||||||||||||| |||||| ||||||| ||||||||    
T  4427 gttattttgccttggaaattgtcaatgttgaccggttgtcacttgatacggatttg-accgaaaatgattcttttaagtcaatcgtcttatgatctttcg 4525  T
Q  177 tgactagccttatgtgtctaaatgaaggtgtgtgat-gaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaata 274  Q
    |||||||||| || || |||| |  || | |||||| |||| || | |||||||||||||| |||||||| ||||||||||||| ||||| |||||||||    
T  4526 tgactagcct-atatgactaagtagagatatgtgattgaatggttacatgttggatatgatgtttatcat-agatgttgtattttctcttgcttggaata 4623  T
Q  275 tgagaaa 281  Q
    |||||||    
T  4624 tgagaaa 4630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 9e-65; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 345 - 517
Target Start/End: Original strand, 19670499 - 19670672
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattg 444  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  19670499 tgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaacttggaggtgattg 19670598  T
Q  445 cattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||| |||||| ||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  19670599 cattgttgagttcttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttgaact 19670672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 23824821 - 23824991
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23824821 atgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 23824919  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||||||||||| ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  23824920 gcattgttgagtccttacttgtatgtccatgcatcatagtcattttgagtcttgtagttgtaaaagggttga 23824991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 23822877 - 23823047
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23822877 atgttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 23822975  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||||||||||| ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  23822976 gcattgttgagtccttacttgtatgtccatgcatcatagtcattttgagtcttgtagttgtaaaagggttga 23823047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 23831956 - 23832126
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23831956 atgttgtgtggacataatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaatt-gaggtgatt 23832054  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| |||||||||||| ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  23832055 gcattgttgagtccttacttgtatgtccatgcatcatagtcattttgagtcttgtagttgtaaaagggttga 23832126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 322 - 514
Target Start/End: Complemental strand, 19658779 - 19658585
Alignment:
Q  322 ctcttaattgttt-atgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatat 420  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||||||| |||| |||||| ||||||||||||    
T  19658779 ctcttaattgttttatgaccggaatgttgtatggatgtaatttcttgataatgcaaatgttgtggagatgatcaacatatctggaagttgtcctttatat 19658680  T
Q  421 tgttgtgaaaattggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||| || |||||||||||||| ||||||| |||| | ||||||||||||| ||| ||||||||||| |||||||||||||| ||||||    
T  19658679 tgttgtgaaattttgaggtgattgcattcttgagtctttacttatatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaaaggttga 19658585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 342 - 514
Target Start/End: Original strand, 4644 - 4815
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga 441  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  4644 gaatgttgtgtggacgtaatttcttgataatgc-aatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaatt-gaggtga 4741  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||||| |||||||||||| |||| |||||| ||| ||| ||||| ||||| |||||||||||||||||||||    
T  4742 ttgcattgttgagtccttacttgtacgtccatccatcatagtcatgatgagtcttgtagttgtaaaagggttga 4815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 344 - 514
Target Start/End: Original strand, 24295941 - 24296111
Alignment:
Q  344 atgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgatt 443  Q
    ||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  24295941 atgttgtgtggacgtaatttcttgataatgcaaatgttttggagatgatcaatatatttgaaagttgtcctttatattgttgtgaaaatt-gaggtgatt 24296039  T
Q  444 gcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||||| || | ||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||    
T  24296040 gcattgttaactccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagagttga 24296111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 153 - 310
Target Start/End: Complemental strand, 19658995 - 19658837
Alignment:
Q  153 agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgt-agatgttggatatgatatttatcatgagatgt 251  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  19658995 agtcaattgtcttatgatccttcgtgactagccttatgtgtctaaataaagatgtgtgatgaattgttaaatgttggatatgatatttatcatgagatgt 19658896  T
Q  252 tgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgatgta 310  Q
    ||||||| || ||||||||||||||||||||| |||||   |||| | |||||||||||    
T  19658895 tgtattttcttttacttggaatatgagaaatatttgaattggtgaaactatatgatgta 19658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 333 - 512
Target Start/End: Complemental strand, 25304388 - 25304206
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaa-a 431  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||||| |||| |||||||||||||||||      
T  25304388 ttatgacttgaatgttgtgtggacgtaattacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcatttatattgttgtgaaagt 25304289  T
Q  432 ttggaggtga-ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggtt 512  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  25304288 ttggaggtgatttgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggtt 25304206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 378 - 514
Target Start/End: Original strand, 24088766 - 24088900
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattgcattattgagtccttactgtatgtccatgcatt 477  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |  ||||| |||||||| |||||||||||||||||||||||||||     
T  24088766 tgttgtggagataatcaatataattggaagttgtcctttatattgttgtgaaatt--gaggttattgcattgttgagtccttactgtatgtccatgcatc 24088863  T
Q  478 atactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||| |||||||| ||||||||||||||||||||||||    
T  24088864 atagtcatgttgggttttgtagttgtaaaagggttga 24088900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 19434813 - 19434998
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19434813 ttatgacttgaatgttgtgtggacgtaaatacttgataattcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaat 19434912  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||| |||  ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| ||||||||| |||||||||||    
T  19434913 tatgagatgattttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgtagttgaaaaagggttga 19434998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 66615 - 66468
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    |||||||||||||||| | ||||| |||||  ||||||||||||||||||| | || ||||||| || ||||||| |||||||| |  ||||| ||||||    
T  66615 ggaaatgattcttttaagccaattatcttacgatctttcgtgactagccttgtatgactaaatggagatgtgtgaatgaattgttatgtgttgtatatga 66516  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||||    
T  66515 tatttatcataagatgttgtatgttctcttacttggaatatgagaaat 66468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 96 - 280
Target Start/End: Complemental strand, 25601053 - 25600866
Alignment:
Q  96 ttatcaatgttagccggttgctacttgatacgtatttttactggaaa-tgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtc 194  Q
    ||||||||||| |||| |||| |||||||  | ||||||| |||||| || |||||| |  |||||||||||| ||||||||||||||| ||| | || |    
T  25601053 ttatcaatgttggccgtttgccacttgatgtggatttttattggaaaatggttctttaaaccaattgtcttatgatctttcgtgactagtcttgtatgac 25600954  T
Q  195 taaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| || ||||||| |||||||| |  || ||||||||||||||||||| |||| |||||| | |||||||||||||||||||||    
T  25600953 taaatggagatgtgtgaatgaattgttatgtgctggatatgatatttatcataagatattgtatgttctcttacttggaatatgagaa 25600866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 153 - 290
Target Start/End: Original strand, 22787151 - 22787290
Alignment:
Q  153 agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatg 250  Q
    ||||||||||||||| |||| |||||||||  ||||| || |||||||||| ||||||| |||||||| | |||||| |||||||||||||||| |||||    
T  22787151 agtcaattgtcttatgatctatcgtgactattcttatatgactaaatgaagatgtgtgaatgaattgttatatgttgaatatgatatttatcataagatg 22787250  T
Q  251 ttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    |||||| | |||||| || |||| ||||||||| ||||||    
T  22787251 ttgtatgttctcttaattagaatgtgagaaatacttgaaa 22787290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 345 - 510
Target Start/End: Original strand, 22137182 - 22137350
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga--t 442  Q
    |||||| ||||||||| | ||||| ||||| ||||||||  || ||||||||| | ||  ||| ||||||||||||||||||||  ||| |||||||  |    
T  22137182 tgttgtgtggacgtaaatacttgataatgcaaatgttgttaaggtgatcaatacaatttaaagttgtcctttatattgttgtgattatttgaggtgatgt 22137281  T
Q  443 tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    |||||| ||||||| || | ||||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  22137282 tgcattgttgagtctttgcttgtatgtccatgcattatagtcatgttgagtcttgtggctgtaaaaggg 22137350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 96 - 289
Target Start/End: Original strand, 24088436 - 24088630
Alignment:
Q  96 ttatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtc 194  Q
    ||||||| ||| |||| |||| ||||||||||   |||||  ||||||| |||||||| | ||||| |||||| |||||| |||||||||||| | || |    
T  24088436 ttatcaaagttggccgtttgccacttgatacgg--ttttatcggaaatggttcttttaagccaattatcttatgatctttagtgactagccttgtatgac 24088533  T
Q  195 taaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaa 289  Q
    |||||| || |||| || |||||||| |  |||||||||||||||||||||| |||||| |||| ||||||||||| |||| ||||||||| |||||    
T  24088534 taaatggagatgtgagaatgaattgttatgtgttggatatgatatttatcataagatgtggtatgtcctcttacttagaatgtgagaaatacttgaa 24088630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 19670338 - 19670400
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  19670338 gatatgatatttatcatgagatgttgtattttctcttacttggaatatgagaaatatttgaaa 19670400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 280
Target Start/End: Complemental strand, 24276920 - 24276810
Alignment:
Q  172 tttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttg 269  Q
    ||||||||||||| |||| || |||||||||| ||||||| |||||| | || ||||||||||||||||||||||  | |||||||||| ||||||||||    
T  24276920 tttcgtgactagctttatatgactaaatgaagatgtgtgaatgaatttttaggtgttggatatgatatttatcatagggtgttgtattttctcttacttg 24276821  T
Q  270 gaatatgagaa 280  Q
    |||||||||||    
T  24276820 gaatatgagaa 24276810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 514
Target Start/End: Complemental strand, 43641647 - 43641462
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||||| | |||||||||| ||||||||||||||| ||| ||||| ||| ||||||||||||||    
T  43641647 ttatgacttgaatgttgtgtggacgtaaatacttgataatgcaattgttgtggaggtgatcaatatatttgaaagttgtccattacattgttgtgaaaat 43641548  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||| |||  || |||| | ||||| || | |||||||| |||||| ||| ||||||||||| ||||||  |||||||||||||    
T  43641547 tatgagatgatttttcattgtcgagtctttgcttgtatgtctatgcatcatagtcatgttgagtcttgtagccgtaaaagggttga 43641462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 347 - 434
Target Start/End: Complemental strand, 7320291 - 7320204
Alignment:
Q  347 ttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||||| |  |||||||| ||||| |||||||||||||| ||||||||||||||||| |||||| |||||||| ||||||||||    
T  7320291 ttgtatggacatgttttcttgataatgcaaatgttgtggagattatcaatatatttggaagttgtcctctatattgtggtgaaaattg 7320204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 149 - 281
Target Start/End: Complemental strand, 19665716 - 19665582
Alignment:
Q  149 ttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgttggatatgatatttatcatgag 247  Q
    |||||| ||||||||||| || ||||||||||||| | ||||||  |||||| || |||||||||||||| |||||||||||| ||||||| | ||| ||    
T  19665716 ttttagccaattgtcttacaacctttcgtgactagacctatgtgattaaatggagatgtgtgatgaattgttagatgttggatgtgatattgaacataag 19665617  T
Q  248 atgttgtatttcctc-ttacttggaatatgagaaa 281  Q
    | ||||| ||| ||| ||||||| |||||||||||    
T  19665616 aagttgtgttttctcgttacttgcaatatgagaaa 19665582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 24572749 - 24572835
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  24572749 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattg 24572835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 434
Target Start/End: Complemental strand, 721276 - 721187
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||| |||||||||   ||||  ||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  721276 tgttgtgtggacgtaaacacttggtaatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgttgtgaaaattg 721187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 21140837 - 21140779
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  21140837 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 21140779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 21275722 - 21275780
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  21275722 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 21275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 22581291 - 22581377
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| || |||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  22581291 tgtatggacatgttttcttgataatgcaaacgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattg 22581377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 352 - 429
Target Start/End: Original strand, 22787399 - 22787476
Alignment:
Q  352 tggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaa 429  Q
    ||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||  ||||| |||||||| |||||    
T  22787399 tggacgtaatttcttggtaatgcaattgttgtggagatgatcaatatatttggaagtcgtcctctatattgtggtgaa 22787476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 34823160 - 34823075
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgat 307  Q
    |||||||||||||||||| |||||||||||||||| | | |||||||||||||||||||||  ||||||  |||| | ||||||||    
T  34823160 atgttggatatgatatttgtcatgagatgttgtatgttcgcttacttggaatatgagaaatgcttgaaatggtgaaactatatgat 34823075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 269989 - 269903
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||| ||||||||||| |||| || |||||| |||||||| ||||||||||    
T  269989 tgtatggacatgttttcttgataatgcaaatgttgtggaggtgatcaatataattgggagttgtcctatatattgtggtgaaaattg 269903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 12643220 - 12643278
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  12643220 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 12643278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 12727121 - 12727063
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||| ||| |||||||||||||||| | |||||||||||||||||||||    
T  12727121 atgttggatatgatgtttgtcatgagatgttgtatgttctcttacttggaatatgagaa 12727063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 22691321 - 22691391
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| |||||||    
T  22691321 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 22691391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 22695968 - 22696038
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| |||||||    
T  22695968 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaa 22696038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 24827764 - 24827822
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||| |||||    
T  24827764 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaataggagaa 24827822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 12727015 - 12726930
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgat 307  Q
    |||| ||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||  ||||||  |||| | ||||||||    
T  12727015 atgtcggatatgatgtttgtcatgagatgttgtatgttctcttacttggaatatgagaaatgcttgaaatggtgaaactatatgat 12726930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 8942607 - 8942552
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  8942607 ttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 8942552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 9782117 - 9782168
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  9782117 gatatgatatttatcataagatgttgtatgttctcttacttggaatatgaga 9782168  T

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Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 12637363 - 12637418
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  12637363 ttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 12637418  T

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Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 4449587 - 4449673
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||||| | | |||||||||||| ||||||| |||||| |||||||| ||||||||||    
T  4449587 tgtatggacatgttttcttgataatgcaaatgttgcgaaaatgatcaatataattggaagttgtcctatatattgtggtgaaaattg 4449673  T

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Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 19887975 - 19888033
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| || ||||||    
T  19887975 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatgtgagaa 19888033  T

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Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 25600763 - 25600677
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||||| |||||||||||||||| |||| || |||||| |||||||| || |||||||    
T  25600763 tgtatggacatgttttcttgataatgcaaatgttgcggagatgatcaatataattgggagttgtcctatatattgtggtaaaaattg 25600677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 27260372 - 27260299
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||||||||||||| |||||||| |||| || |||||| |||||| | ||||||||||    
T  27260372 tttcttgataatgcaaatgttgtggagatggtcaatataattgggagttgtcctatatattatggtgaaaattg 27260299  T

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Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 721446 - 721378
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    |||||| || |||||||| |||| ||||||||||| ||||||||||| |||| ||||||||| ||||||    
T  721446 atgttgaatgtgatatttgtcataagatgttgtatgtcctcttacttagaatgtgagaaatacttgaaa 721378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 14907636 - 14907692
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  14907636 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 14907692  T

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Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 23819138 - 23819082
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  23819138 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 23819082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 24967259 - 24967203
Alignment:
Q  224 gttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||| ||| |||||||| ||| | |||||||||||||||||||||    
T  24967259 gttggatatgatatttgtcaagagatgttatatgttctcttacttggaatatgagaa 24967203  T

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Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 66342 - 66283
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatt 401  Q
    ||||||||| ||||||||||||||||| ||| | |||||||||||  |||||||||||||    
T  66342 gaatgttgtgtggacgtaatttcttgataatacaaatgttgtggatgtgatcaatatatt 66283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 3800201 - 3800260
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||    
T  3800201 atgttgaatatgatatttatcaagagatgttgtttttccctattacttggaatatgagaa 3800260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 3800308 - 3800367
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| ||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||    
T  3800308 atgttgaatatgatatttatcaagagatgttgtttttccctattacttggaatatgagaa 3800367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 347 - 508
Target Start/End: Complemental strand, 18534636 - 18534471
Alignment:
Q  347 ttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgt-gaaaattg-gaggtgatt- 443  Q
    |||| ||||||||||  ||||| ||||| | |||||| ||| ||||||||||| || || | | |||||||||||||||| ||| |||  |||||||||     
T  18534636 ttgtgtggacgtaata-cttgataatgcaattgttgttgaggtgatcaatataatttgaggttatcctttatattgttgttgaatattatgaggtgattt 18534538  T
Q  444 -gcattattgagtccttact-gtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
     ||||| | ||||| || || |||||||||||||| ||||||||||||||| |||  ||||||||||    
T  18534537 tgcattgtcgagtctttgcttgtatgtccatgcatcatactcatgttgagtcttgatgttgtaaaag 18534471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 24276695 - 24276530
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| ||| ||||| | ||||| ||||| | |||||| ||| ||||||||||| ||||| | | ||||||||||||||||||| |||  ||| |||      
T  24276695 tgttgtctggtcgtaaatacttgataatgcaattgttgttgaggtgatcaatataattggaggttatcctttatattgttgtgaatattatgagatgatt 24276596  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaa 506  Q
    ||||||| | ||||| || | ||||||| ||||||| ||| ||||||||||| |||  ||||||||    
T  24276595 ttgcattgtcgagtctttgcttgtatgttcatgcatcatagtcatgttgagtcttgatgttgtaaa 24276530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 36892067 - 36892153
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||  |||||||||||||| ||||||||| |||| || |||||| |||||||  ||||||||||    
T  36892067 tgtatggacatgttttcttgataatgaaaatgttgtggagataatcaatataattgggagttgtcctatatattgaggtgaaaattg 36892153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 7320458 - 7320393
Alignment:
Q  217 tgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||| |||||||||||||| ||||||||| |||||||||| | ||||||||| |||| | ||||||    
T  7320458 tgtatatgttggatatgatgtttatcatgggatgttgtatgttctcttacttagaatgtaagaaat 7320393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 22273674 - 22273601
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| |||||||||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  22273674 tttcttgataatgcgaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 22273601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 434
Target Start/End: Complemental strand, 28972810 - 28972757
Alignment:
Q  381 tgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||||||||||||||| |||| | |||||| |||||||| ||||||||||    
T  28972810 tgtggagatgatcaatatatatggatgttgtcctctatattgtggtgaaaattg 28972757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 6878244 - 6878075
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| |  |||||||| ||||| || | ||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||| | ||    
T  6878244 tgtatggacatgttttcttgataatgcaaaggatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgtgattgtggtcgc 6878145  T
Q  446 attattgagtc--cttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||||   |||||   ||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  6878144 attatcgagtcttgttact---tgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 6878075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 517
Target Start/End: Complemental strand, 8886929 - 8886773
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgcattattgagtcct 458  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | |||||||| ||  || || ||||||| |||| ||    
T  8886929 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattgtgattgttatcgcattatcgagt-ct 8886831  T
Q  459 tactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |  |  ||||||||| || ||| || |||||||  ||||||||||||||||||||||||    
T  8886830 tgttacatgtccatgtatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 8886773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 24827938 - 24827998
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||  | |||||| |||||||    
T  24827938 tttcttgataatgc-aatgttgtggagatgatcaatataattgggtgttgtcctatatattg 24827998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 24967086 - 24967025
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||    
T  24967086 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattg 24967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 43644346 - 43644419
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  43644346 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 43644419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 20014078 - 20014025
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||  | || ||| ||||||||||||||||||    
T  20014078 ttggatatgatgtttatcatgagatgt--ttttccctattacttggaatatgagaa 20014025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 22581129 - 22581188
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||||||| |||||||||||||| ||||| | ||||||||| |||| | ||||||    
T  22581129 atgttggatatgatgtttatcatgagatg-tgtatgttctcttacttagaatgtaagaaat 22581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 22862171 - 22862120
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||||||| |  ||||||| || ||||||||||||||||||||||    
T  22862171 atgtccatgcattatagttgtgttgagatt-gtagttgtaaaagggttgaact 22862120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 25600644 - 25600593
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| ||  ||||||||| ||||||||||||||||||||||    
T  25600644 atgtccatgcatcatagtctcgttgagttt-gtagttgtaaaagggttgaact 25600593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 27260266 - 27260215
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||| ||||||| ||| |||||||| |||| ||||||||||||||||||||||    
T  27260266 atgttcatgcatcatagtcatgttgtgttt-gtagttgtaaaagggttgaact 27260215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 122; Significance: 2e-62; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 106269 - 106449
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  106269 ttatgacttgaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatataattggaagttgtcctttatattgttgtgaaaat 106368  T
Q  433 tggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    | |||||||||||||| ||||||||||||||||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  106369 t-gaggtgattgcatttttgagtccttactgtatgttcatacatcatagtcatgttgagtcttgtagttgtaaaagggttga 106449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 168 - 280
Target Start/End: Complemental strand, 130923 - 130809
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtagat-gttggatatgatatttatcatgagatgttgtatttcctctta 265  Q
    |||| |||||||||||| || | || |||||||||| |||| || ||||||||  || |||||||||||||||||||||| | |||||||||| ||||||    
T  130923 aatccttcgtgactagctttgtatgactaaatgaagatgtgggaatgaattgttaattgttggatatgatatttatcatggggtgttgtattttctctta 130824  T
Q  266 cttggaatatgagaa 280  Q
    |||| ||||||||||    
T  130823 cttgaaatatgagaa 130809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 491
Target Start/End: Complemental strand, 108454 - 108308
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttg 444  Q
    ||||||||| | ||||||| | ||||| | |||| |||||||||||||||||||| |||  ||||||||||||||| ||| |||||| |||||||  | |    
T  108454 tgtatggacatgatttcttaataatgcaattgttctggagatgatcaatatatttagaaattgtcctttatattgtggtggaaattgtgaggtgatgtcg 108355  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgag 491  Q
    |||||| ||||| || ||  |||||||||||| ||| || |||||||    
T  108354 cattatcgagtctttgctacatgtccatgcatcatagtcgtgttgag 108308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 492
Target Start/End: Complemental strand, 130697 - 130546
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| ||||||||| | ||||| ||||| | ||| || ||| ||||||||||| ||||| | | ||||||||||||||||||| |||  |||||||      
T  130697 tgttgtgtggacgtaaatacttgataatgcaattgtggttgaggtgatcaatataattggaggttatcctttatattgttgtgaatattatgaggtgaat 130598  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagt 492  Q
    ||||||| | ||||| || | ||||||||||||||| ||| |||||||||||    
T  130597 ttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagt 130546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 345 - 513
Target Start/End: Complemental strand, 4836 - 4667
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattg 444  Q
    |||||| |||| ||||||||||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  4836 tgttgtgtggatgtaatttcttgagaatgcagatgttgtggagataatcaatatatttggaagttgtcctttatattgttgtgaaacttggaggtgattg 4737  T
Q  445 cattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttg 513  Q
    |||| |||||||||||| ||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||    
T  4736 cattgttgagtccttacttgtatgtccatgcatcatagtcatgctgagtcttgtagttgtaaaagggttg 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 7013 - 7193
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  7013 ttatgacttgaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatataatttgaagttgtcctttatattgttgtgaaaat 7112  T
Q  433 tggaggtgattgcattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||| |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||| | ||||| |||||| ||||||    
T  7113 tgg-ggtgattgcattgttgagtccttactgtatgtccatgcatcatagtcatgttgagtctggtagtcgtaaaaaggttga 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 109; Significance: 1e-54; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 345 - 512
Target Start/End: Complemental strand, 78487 - 78319
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattg 444  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  78487 tgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaatttgaaggtgattg 78388  T
Q  445 cattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggtt 512  Q
    |||| |||||||||||| ||||| | ||||||| ||| | ||||||||| |||||||||||||||||||    
T  78387 cattgttgagtccttacttgtatattcatgcatcatagttatgttgagtcttgtagttgtaaaagggtt 78319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 165 - 310
Target Start/End: Complemental strand, 78712 - 78567
Alignment:
Q  165 tataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctctt 264  Q
    |||||||||||||||| | | || |||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  78712 tataatctttcgtgaccaactttgtgtggctaaatgaagatgtgtgatgaattgtagatgttggatatgataattatcatgagatgttgtattttctctt 78613  T
Q  265 acttggaatatgagaaataattgaaacagtgagattatatgatgta 310  Q
    ||||| ||||||||||||| |||||   |||| | |||||||||||    
T  78612 acttgaaatatgagaaatatttgaattggtgaaactatatgatgta 78567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 90081 - 90139
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  90081 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 90139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 129345 - 129290
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  129345 ttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 129290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 108; Significance: 5e-54; HSPs: 5)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 352 - 514
Target Start/End: Original strand, 23792 - 23955
Alignment:
Q  352 tggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattgcattatt 451  Q
    ||||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||    
T  23792 tggacgtaatttcttgataatgcaaatgttatggagataatcaatatatttggaagttgtcctttatattgttgtgaaacttggagctgattgcattgtt 23891  T
Q  452 gagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||| ||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  23892 gagtccttacttgtatgtacatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 23955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 28476 - 28412
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  28476 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaat 28412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 40472 - 40408
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  40472 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaat 40408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 28611 - 28553
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||||    
T  28611 atgttggatatgatgtttatcatgagatattgttttccctcttacttggaatatgagaa 28553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 40607 - 40549
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||||    
T  40607 atgttggatatgatgtttatcatgagatattgttttccctcttacttggaatatgagaa 40549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 104; Significance: 1e-51; HSPs: 4)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 870 - 604
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| ||||||| |||||| || | ||||||||| || |||||||||| || ||||||||||||||  ||||||||||||||||  |||||    
T  870 cttaagctcatgactacatgagtgattaagaatatcttgtgagttttcaaacttgaataaattattttatcttggaaattatcaatgttagccatttgct 771  T
Q  118 acttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaat 216  Q
    |||||||| | ||||| || |||||  |||||||| || |||||||||||| | |||| |||||||||||||| || |||| ||||||||||||||||||    
T  770 acttgatatgaatttt-accggaaactattctttttagccaattgtcttatgaccttttgtgactagccttatatgactaattgaaggtgtgtgatgaat 672  T
Q  217 tgtagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    | ||||||||||||||||||||||||||||| |||| | ||| ||| ||||||  |||||||||||||    
T  671 tatagatgttggatatgatatttatcatgaggtgttttgttttctctttacttataatatgagaaata 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 5925 - 5659
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| ||||||| |||||| || | ||||||||| || |||||||||| || ||||||||||||||  ||||||||| ||||||  |||||    
T  5925 cttaagctcatgactacatgagtgattaagaatatcttgtgagttttcaaacttgaataaattattttatcttggaaattatcaatattagccatttgct 5826  T
Q  118 acttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaat 216  Q
    |||||||| | ||||| || |||||  |||||||| || |||||||||||| | |||| |||||||||||||| || |||| ||||||||||||||||||    
T  5825 acttgatatgaatttt-accggaaactattctttttagccaattgtcttatgaccttttgtgactagccttatatgactaattgaaggtgtgtgatgaat 5727  T
Q  217 tgtagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    | ||||||||||||||||||||||||||||| |||| | ||| ||| ||||||  |||||||||||||    
T  5726 tatagatgttggatatgatatttatcatgaggtgttttgttttctctttacttataatatgagaaata 5659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 345 - 510
Target Start/End: Complemental strand, 498 - 330
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga--t 442  Q
    |||||| ||||||||| | ||| | ||||| |||||||| ||||||||||||| | ||||||| | ||||||| ||||||||||  ||| |||||||  |    
T  498 tgttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacattgttgtgattatttgaggtgatgt 399  T
Q  443 tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    |||||| | ||||| || | ||||||||||||||| ||| ||||| ||||| |||| ||||||||||||    
T  398 tgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgctgagtcttgtggttgtaaaaggg 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 345 - 510
Target Start/End: Complemental strand, 5553 - 5385
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga--t 442  Q
    |||||| ||||||||| | ||| | ||||| |||||||| ||||||||||||| | ||||||| | ||||||| ||||||||||  ||| |||||||  |    
T  5553 tgttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacattgttgtgattatttgaggtgatgt 5454  T
Q  443 tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    |||||| | ||||| || | ||||||||||||||| ||| ||||| ||||| |||| ||||||||||||    
T  5453 tgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgctgagtcttgtggttgtaaaaggg 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 4458 - 4192
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| ||||||| |||||| || | ||||||||| || |||||||||| || ||||||||||||||  ||||||||||||||||  |||||    
T  4458 cttaagctcatgactacatgagtgattaagaatatcttgtgagttttcaaacttgaataaattattttatcttggaaattatcaatgttagccatttgct 4359  T
Q  118 acttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaat 216  Q
    |||||||| | ||||| || |||||  |||||||| || |||||||||||| | |||| |||||||||||||| || |||| ||||||||||||||||||    
T  4358 acttgatatgaatttt-accggaaactattctttttagccaattgtcttatgaccttttgtgactagccttatatgactaattgaaggtgtgtgatgaat 4260  T
Q  217 tgtagatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    | ||||||||||||||||||||||||||||| |||| | ||| ||| ||||||  |||||||||||||    
T  4259 tatagatgttggatatgatatttatcatgaggtgttttgttttctctttacttataatatgagaaata 4192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 345 - 510
Target Start/End: Complemental strand, 4086 - 3918
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtga--t 442  Q
    |||||| ||||||||| | ||| | ||||| |||||||| ||||||||||||| | ||||||| | ||||||| ||||||||||  ||| |||||||  |    
T  4086 tgttgtgtggacgtaaatacttcataatgcaaatgttgttgagatgatcaatacaattggaagttatcctttacattgttgtgattatttgaggtgatgt 3987  T
Q  443 tgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaaggg 510  Q
    |||||| | ||||| || | ||||||||||||||| ||| ||||| ||||| |||| ||||||||||||    
T  3986 tgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatggtgagtcttgtggttgtaaaaggg 3918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 34 - 287
Target Start/End: Original strand, 6142 - 6399
Alignment:
Q  34 tacatgattgattatgatt-tcttgtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgctacttgatacgtatt 131  Q
    |||||||||||||| |||| ||||||||| || ||| |||||| || ||||||||||||||  ||||||||||||  | |||||  |||||||||| | |    
T  6142 tacatgattgattaagattatcttgtgagttttcaaccttgaataacttattttatcttggaaattatcaatgttgacaggttgtcacttgatacggact 6241  T
Q  132 tttactggaaatgattc-ttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagatgttgga 229  Q
    || || ||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||| |||| ||||| ||| |||||||||| |||||||||||    
T  6242 tt-accggaaatgattccttttagccaattatcttacaatctttcgtgactagccttatgtgactaagtgaagatgtatgatgaattgttagatgttgga 6340  T
Q  230 tatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattg 287  Q
    ||||||||| ||||| ||||||||| ||| ||| ||||||| |||||||||||||||||    
T  6341 tatgatattgatcataagatgttgtgttttctcgttacttgcaatatgagaaataattg 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 342 - 514
Target Start/End: Original strand, 3648 - 3824
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  ||| ||    
T  3648 gaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgagatg 3747  T
Q  441 a--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||||||| | ||||| |||| ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  3748 atcttgcattgtcgagtctttacttgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 3824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 138 - 287
Target Start/End: Original strand, 3405 - 3556
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    |||||||||||||||| | |||||||||||| ||||||| |||||||||| || ||  ||| |  || ||||||| |||||||| |   |||||||||||    
T  3405 ggaaatgattcttttaagccaattgtcttatgatctttcatgactagcct-atatgagtaagtagagatgtgtgaatgaattgttatgagttggatatga 3503  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||||| ||||||||||| | |||||||||||||||||| |||| ||||    
T  3504 tatttatcataagatgttgtatgttctcttacttggaatatgacaaatgattg 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 342 - 514
Target Start/End: Complemental strand, 13388778 - 13388603
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaa-attggaggtg 440  Q
    ||||||||| ||||||||||| ||| | ||||  | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  13388778 gaatgttgtgtggacgtaattacttaataatgtaattgttgaggagatgatcaatatatttggaatatgtcctttatattgttgtgaaagtttggaggtg 13388679  T
Q  441 a-ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    | ||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| || ||||||||||||||||||    
T  13388678 atttgcattgttgagtccttacttgtatgtccatgcatcatagtcatgttgagtcttatagttgtaaaagggttga 13388603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 360 - 514
Target Start/End: Original strand, 15913812 - 15913961
Alignment:
Q  360 atttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattgcattattgagtcctt 459  Q
    |||| |||| ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||      |||||||||||||||| ||||||||||    
T  15913812 attttttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcatttatattgttgt------tggaggtgattgcatttttgagtcctt 15913905  T
Q  460 ac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    || ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  15913906 acctgtatgtccatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 15913961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 333 - 514
Target Start/End: Complemental strand, 13376489 - 13376309
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| | || ||||||||||||||||| |    
T  13376489 ttatgacttgaatgttgtgtggacgtaatttcttgataatgcaaatgttgtggagatgatcaatata-ttggaagttatcatttatattgttgtgaaagt 13376391  T
Q  433 tggaggtgattgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    | |||||||||||||| |||||||||||| || |||||||||||| ||| |||| || ||| || | ||||||||||||||||    
T  13376390 t-gaggtgattgcattgttgagtccttacttgcatgtccatgcatcatagtcatatttagtcttatggttgtaaaagggttga 13376309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 333 - 514
Target Start/End: Original strand, 9057976 - 9058161
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| | ||||| ||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9057976 ttatgacttgaatgttgtgtggacgtaaatacttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctttatattgttgtgaaaat 9058075  T
Q  433 t-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  |||||||  ||||||| | ||||| || | ||||||||||||||| ||| ||| ||||||| |||||| | ||||||||||||    
T  9058076 tatgaggtgattttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcaagttgagtcttgtagctttaaaagggttga 9058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 9057708 - 9057901
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| |||| |||| |||||||| | |||||  | |||||||||||| ||| | ||||| |||||| ||||||||||||||||||||| ||     
T  9057708 attatcaatgttggccgtttgccacttgatatggattttatc-ggaaatgattctgttaagccaattatcttatgatctttcgtgactagccttatatga 9057806  T
Q  194 ctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||||  ||||||| |||||||| | |||||| |||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||    
T  9057807 ctaaatgaaaatgtgtgaatgaattgttatatgttg-atatgatacttatcataagatgttgtatgttctcttacttggaatatgagaaataattg 9057901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 9610326 - 9610179
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    |||||||||||||||| | |||||||||||| ||||||| ||||||||||||| || |||||||||| ||||||| |||||||| | |||||| ||||||    
T  9610326 ggaaatgattcttttaagccaattgtcttatgatctttcttgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttg-atatga 9610228  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||  |||||||||| | |||||||||||||| |||||||||    
T  9610227 tatttatcatatgatgttgtatgttctcttacttggaatgtgagaaata 9610179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 9837898 - 9837751
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    |||||||||||||||| | |||||||||||| ||||||| ||||||||||||| || |||||||||| ||||||| |||||||| | |||||| ||||||    
T  9837898 ggaaatgattcttttaagccaattgtcttatgatctttcttgactagccttatatgactaaatgaagatgtgtgaatgaattgttatatgttg-atatga 9837800  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||  |||||||||| | |||||||||||||| |||||||||    
T  9837799 tatttatcatatgatgttgtatgttctcttacttggaatgtgagaaata 9837751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 283
Target Start/End: Complemental strand, 48354423 - 48354278
Alignment:
Q  140 aaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgata 236  Q
    |||||||||||||| | ||||| |||||| ||||||||||||||| ||||| || |||||||||| ||||||| |||||||| | |||||| ||||||||    
T  48354423 aaatgattcttttaagccaattatcttatgatctttcgtgactaggcttatatgactaaatgaagatgtgtgaatgaattgttatatgttg-atatgata 48354325  T
Q  237 tttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
     ||||||| ||||||||||| | ||||||||||||||||||||||||    
T  48354324 attatcataagatgttgtatgttctcttacttggaatatgagaaata 48354278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 12753685 - 12753516
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattgga--ggtgattgc 445  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  ||   ||  | ||    
T  12753685 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagatgtcctttatattgtggtgaaattgtgaattgttgtcgc 12753586  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||| |||  |  |||||||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  12753585 attatcgagt-cttgttacatgtccatgcatcatagtcatgttgag-attgtagttgtaaaagggttgaact 12753516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 20 - 290
Target Start/End: Original strand, 10861839 - 10862110
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctac 119  Q
    |||||||| |||| |||||||||||||| ||||  ||| | ||||| ||||||   | |||  ||| ||||||  |||||||||||| |||| |||| ||    
T  10861839 cttaagctcatgactacatgattgattaagattgtttgagggcttccaacttgtctatgttgctttgtcttgggaattatcaatgttggccgtttgccac 10861938  T
Q  120 ttgatacg-tatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaatt 217  Q
    |||||||| || || |   ||||||| | |||| |||||||| |||||| |||| ||||||||| |||||| || |||| ||||| ||||||| |||||     
T  10861939 ttgatacggtacttgtc--ggaaatgttcctttgagtcaattatcttatgatctatcgtgactatccttatatgactaagtgaagatgtgtgaatgaatg 10862036  T
Q  218 gt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    || | || ||| ||||||||||| |||||||||||||||| |  |||||||| |||| ||||||||| ||||||    
T  10862037 gttatattttgaatatgatatttgtcatgagatgttgtatgttatcttacttagaatgtgagaaatacttgaaa 10862110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 95 - 280
Target Start/End: Original strand, 16920990 - 16921176
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| |||| |||| |||||||| | |||||  | || ||||||||||||| | ||||| |||||| ||||||||||||| ||||||| ||     
T  16920990 attatcaatgttggccgtttgccacttgatatggattttatc-ggtaatgattcttttaagccaattatcttatgatctttcgtgactggccttatatga 16921088  T
Q  194 ctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||| |||||| |||||||| |  ||||| ||||||||||||||| | ||||||||||| | |||||||||  ||||||||||    
T  16921089 ctaaatgaagatgtgtgaatgaattgttctatgtt-gatatgatatttatcttaagatgttgtatgttctcttactttaaatatgagaa 16921176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 11286015 - 11285929
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  11286015 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttctcctttatattgtggtgaaaattg 11285929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 12249473 - 12249559
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| ||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||    
T  12249473 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggtagttgtcctctatattgtggtgaaaattg 12249559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 13273547 - 13273465
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaa 430  Q
    ||||||||| | ||||||||| ||||| | |||||||||||||||||||||||||||||| |||||| |||||||| ||||||    
T  13273547 tgtatggacatgatttcttgataatgcaattgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaa 13273465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 280
Target Start/End: Original strand, 9322173 - 9322288
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-tt 264  Q
    |||||||||| ||||||||||| || |||||||||| | |||| |||||||| ||| ||||| |||||||||||||||| || ||||| |||| ||| ||    
T  9322173 aatctttcgtaactagccttatatgactaaatgaagatatgtgaatgaattgttaggtgttgaatatgatatttatcataaggtgttgcattttctcttt 9322272  T
Q  265 acttggaatatgagaa 280  Q
    ||||||||||||||||    
T  9322273 acttggaatatgagaa 9322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 15761554 - 15761625
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||| | || | ||||||||||||||||||||    
T  15761554 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttattttccatcttacttggaatatgagaa 15761625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 15952294 - 15952352
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  15952294 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 15952352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 13376624 - 13376543
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatgatgt 309  Q
    |||||||||||||||||| |||||||||| | | |||||||||||||||||||||||||| |   |||| ||||||||||||    
T  13376624 gatatgatatttatcatgtgatgttgtatgttcccttacttggaatatgagaaataattggagtggtgaaattatatgatgt 13376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 20584012 - 20584129
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtaga-tgttggatatgatatttatcatgagatgttgtatttcctctta 265  Q
    ||||||||||||||||| |||| || |||||||||| |  |||| ||||||||  | ||||||||||||| ||||||||  | |||||||||| ||||||    
T  20584012 aatctttcgtgactagctttatatgactaaatgaagatacgtgaatgaattgttaagtgttggatatgatgtttatcatagggtgttgtattttctctta 20584111  T
Q  266 cttggaatatgagaaata 283  Q
    |||| |||||||||||||    
T  20584112 cttgaaatatgagaaata 20584129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 2027523 - 2027468
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||    
T  2027523 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttggaatatga 2027468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 2191894 - 2191952
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| || |||||||||||||||| | |||||||||||||||||||||    
T  2191894 atgttggatatgataattgtcatgagatgttgtatgttctcttacttggaatatgagaa 2191952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 15629575 - 15629489
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| | ||||||||| ||| | | ||||||||| |||||||||||||||| ||| |||||| |||||||| ||||||||||    
T  15629575 tgtatggacatgatttcttgataatacaattgttgtggaaatgatcaatatatttgaaagttgtcctctatattgtggtgaaaattg 15629489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 16480134 - 16480192
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| ||||| |||||||||| | |||||||||||||||||||||    
T  16480134 atgttggatatgatatttgtcatgtgatgttgtatgttctcttacttggaatatgagaa 16480192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 492
Target Start/End: Original strand, 9322418 - 9322571
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttg-tgaaaatt--ggaggtga 441  Q
    |||||||||||||||| | ||||| ||||| | |||||| ||| |||||||||||  |||| | | ||||||||||||||| |||| |||   |||||||    
T  9322418 tgttgtatggacgtaaatacttgataatgcaattgttgttgaggtgatcaatataaatggaggttatcctttatattgttgttgaatatttatgaggtga 9322517  T
Q  442 --ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagt 492  Q
      ||||||| | ||||| |||| ||||||||||||||| ||| |||||||||||    
T  9322518 ttttgcattgtcgagtctttacttgtatgtccatgcatcatagtcatgttgagt 9322571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 10862245 - 10862300
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||    
T  10862245 tgttgtggagatgatcaatgtatttggaagttgtcctctatattgtggtgaaaatt 10862300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 13912311 - 13912370
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  13912311 atgttgaatatgatatttatcatgagatgttgtttttccccattacttggaatatgagaa 13912370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 17225126 - 17225173
Alignment:
Q  232 tgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  17225126 tgatatttatcataagatgttgtatgtcctcttacttggaatatgaga 17225173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 7291819 - 7291761
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||    
T  7291819 atgttggatatgatatttgtcataagatgttgtatgttctcttacttgggatatgagaa 7291761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 11515193 - 11515135
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| ||  ||||||||||||||| | |||||||||||||||||||||    
T  11515193 atgttggatatgataattgccatgagatgttgtatgttctcttacttggaatatgagaa 11515135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 16417430 - 16417372
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||||| |||||||||    
T  16417430 atgttggatatgataattgtcatgagatgttgtatgttctcttacttgggatatgagaa 16417372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 26010389 - 26010447
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| ||||||||||| | |||||||||||||| | |||||||||||||||||||||    
T  26010389 atgttgaatatgatatttgtgatgagatgttgtatgttctcttacttggaatatgagaa 26010447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 32495753 - 32495811
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || ||| |||||| |||||||||||    
T  32495753 atgttgaatatgatatttatcatgagatgttgttttccctattacttagaatatgagaa 32495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 517
Target Start/End: Original strand, 45453629 - 45453787
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatat-atttggaagatgtcctttatattgttgtgaaaattggag---gtgattgcattattgagtc 456  Q
    |||||||| ||||| |||| ||||||||||| |||||| ||| ||||| |||||| |||||||| ||||||||||  |   ||  | ||||||| ||||     
T  45453629 tttcttgataatgcaaatgatgtggagatgaacaatataattgggaagttgtcctatatattgtggtgaaaattgtggattgttgtcgcattatcgagt- 45453727  T
Q  457 cttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||  |  |||||||||||| ||| ||||||||||  ||||||||||||||||||||||||    
T  45453728 cttgttacatgtccatgcatcatagtcatgttgag-attgtagttgtaaaagggttgaact 45453787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 49049173 - 49049247
Alignment:
Q  360 atttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| ||||| | ||| |||||||||||||| ||||||| ||| ||||||||||||||| ||| ||||||    
T  49049173 atttcttgataatgcaattgtggtggagatgatcaacatatttgaaagttgtcctttatattgtggtggaaattg 49049247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 15442760 - 15442816
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  15442760 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 15442816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 30263325 - 30263381
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  30263325 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 30263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 11515087 - 11515028
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    |||||| ||||||||| |||||||||||||||| ||| ||| ||||||||||||||||||    
T  11515087 atgttgaatatgatatctatcatgagatgttgtttttccctattacttggaatatgagaa 11515028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 142431 - 142345
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||||    
T  142431 tgtatggacatgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattg 142345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 15823770 - 15823844
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  | ||||||||||||||    
T  15823770 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctttatattg 15823844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Original strand, 26071625 - 26071795
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggag---gtgattg 444  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  |  ||||| |||||||  ||||||||||  |   ||  | |    
T  26071625 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggcgtggtcctatatattgaggtgaaaattgtggattgttgtcg 26071724  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||| ||||||||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  26071725 cattatcgagtcctt-gtacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 26071795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Original strand, 26095412 - 26095582
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggag---gtgattg 444  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  |  ||||| |||||||  ||||||||||  |   ||  | |    
T  26095412 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggcgtggtcctatatattgaggtgaaaattgtggattgttgtcg 26095511  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||| ||||||||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  26095512 cattatcgagtcctt-gtacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 26095582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 517
Target Start/End: Original strand, 1938144 - 1938299
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattgga-ggtgattgcattattgagtcctt 459  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | |||||||| |  ||  | ||||||| |||| |||    
T  1938144 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattgaattgttgtcgcattatcgagt-ctt 1938242  T
Q  460 actgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    | |  |||||||||||| ||| || |||||||  ||||||||||||||| ||||||||    
T  1938243 attacatgtccatgcatcatagtcttgttgag-attgtagttgtaaaagagttgaact 1938299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 2192069 - 2192142
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  2192069 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 2192142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 7291644 - 7291571
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  7291644 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 7291571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 16571450 - 16571538
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatca--atatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||| ||||||||||  |||||| || ||| |||||| |||||||| ||||||||||    
T  16571450 tgtatggacatgttttcttgataatgcaaatgttgttgagatgatcaatatatatatgaaagttgtcctctatattgtggtgaaaattg 16571538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 16594212 - 16594124
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaat--atatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||| ||||||||||||  |||| || ||| |||||| |||||||| ||||||||||    
T  16594212 tgtatggacatgttttcttgataatgcaaatgttgttgagatgatcaatatatatatgaaagttgtcctctatattgtggtgaaaattg 16594124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 2191748 - 2191800
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatga 277  Q
    ||||||||||||||||| ||||||| |||| || ||| |||||||||||||||    
T  2191748 ttggatatgatatttattatgagatattgttttccctattacttggaatatga 2191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 13273719 - 13273659
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||||||| ||||||||| |||||||||| | ||||||||| |||| | ||||||    
T  13273719 atgttggatatgatgtttatcatgggatgttgtatgttctcttacttagaatgtaagaaat 13273659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 16918558 - 16918507
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||||||| | ||||||||| | ||||||||||| ||||||||    
T  16918558 gatatgatatttatcatcatatgttgtatgttctcttacttggcatatgaga 16918507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 49048991 - 49049050
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    ||||||||||||| ||||||||| |||||||||| | ||||||||| |||| | ||||||    
T  49048991 tgttggatatgatgtttatcatgggatgttgtatgttctcttacttagaatgtaagaaat 49049050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 3048687 - 3048630
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    |||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  3048687 ttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 3048630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 258
Target Start/End: Complemental strand, 14939984 - 14939745
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| ||||||||||||||||||| ||||   |||||||  |||||||||||| |||||| ||| | ||||  ||||| |||||| |||| || |     
T  14939984 cttaagctcatgattacatgattgattaagattgatttgtgagttttcaaacttgaataagttactttcttttgggaattatgaatgttggccgtttacc 14939885  T
Q  118 acttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaatt 217  Q
    |||||||||| | |||   |  ||||||| |||| || ||| |  |||||||||||| |||| |||  |||| ||  | ||||||| | |||||  ||||    
T  14939884 acttgatacggacttt--atcaaaatgatcctttgagccaaataccttataatcttttgtgattagttttatatgattgaatgaagatatgtgagtaatt 14939787  T
Q  218 gt-agatgttggatatgatatttatcatgagatgttgtattt 258  Q
    || || | ||| |||||||||||||||| || ||||||||||    
T  14939786 gtgaggtcttgaatatgatatttatcataaggtgttgtattt 14939745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 258
Target Start/End: Complemental strand, 15367577 - 15367338
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| ||||||||||||||||||| ||||   |||||||  |||||||||||| |||||| ||| | ||||  ||||| |||||| |||| || |     
T  15367577 cttaagctcatgattacatgattgattaagattgatttgtgagttttcaaacttgaataagttactttcttttgggaattatgaatgttggccgtttacc 15367478  T
Q  118 acttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaatt 217  Q
    |||||||||| | |||   |  ||||||| |||| || ||| |  |||||||||||| |||| |||  |||| ||  | ||||||| | |||||  ||||    
T  15367477 acttgatacggacttt--atcaaaatgatcctttgagccaaataccttataatcttttgtgattagttttatatgattgaatgaagatatgtgagtaatt 15367380  T
Q  218 gt-agatgttggatatgatatttatcatgagatgttgtattt 258  Q
    || || | ||| |||||||||||||||| || ||||||||||    
T  15367379 gtgaggtcttgaatatgatatttatcataaggtgttgtattt 15367338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 15926330 - 15926272
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||| || || ||||||||| |||||| | ||||||| |||||||||||||    
T  15926330 atgttggatatgttaattttcatgagatattgtatgttctcttacatggaatatgagaa 15926272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 47288579 - 47288493
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| ||| |||  ||||||||||    
T  47288579 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatattttgaggtgaaaattg 47288493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 112670 - 112743
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| || || |||| ||||||||||| ||||||| ||||  |||||||| |||||||| | ||||||||    
T  112670 tttcttgataaagcaaatgatgtggagatgaacaatataattgggtgatgtcctatatattgtggagaaaattg 112743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 369678 - 369605
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  369678 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 369605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 433
Target Start/End: Complemental strand, 2027361 - 2027276
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||| |||  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | |||||||    
T  2027361 tgtatgggcgtgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaatt 2027276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 13867447 - 13867520
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | ||| || |||||||  ||||||||||    
T  13867447 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgttctatatattgaagtgaaaattg 13867520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 32495928 - 32496001
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  32495928 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 32496001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 3893781 - 3893730
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  3893781 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 3893730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 13273922 - 13273814
Alignment:
Q  19 acttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgcta 118  Q
    ||||||| | |||| |||||||||||||| ||||  ||| ||||||  ||||||   | |||||||||  ||||  |||||||||||| |||| |||| |    
T  13273922 acttaagttcatgactacatgattgattaagattgtttgagagctttcaacttgtctatgttattttacattgggaattatcaatgttggccgtttgcca 13273823  T
Q  119 cttgatacg 127  Q
    |||||||||    
T  13273822 cttgatacg 13273814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 49048788 - 49048900
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctac 119  Q
    |||||||| |||| |||||||||||||| ||||  ||| || |||  ||||||   | ||||||||  |||||  |||||||||||| |||| |||| ||    
T  49048788 cttaagctcatgactacatgattgattaagattgtttgagaacttttaacttgtctatgttattttgccttgggaattatcaatgttggccgtttgccac 49048887  T
Q  120 ttgatacgtattt 132  Q
    |||||||| ||||    
T  49048888 ttgatacggattt 49048900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 90; Significance: 3e-43; HSPs: 3)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 139 - 283
Target Start/End: Original strand, 12051 - 12196
Alignment:
Q  139 gaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgt-agatgttggatatgatat 237  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||||||||| || ||||||| || ||| |||||| |||| ||||||||||||||||||    
T  12051 gaaatgattattttagccaattgtcttataatcttttgtgactagccttatatgactaaatgcagttgtttgatgatttgttagatgttggatatgatat 12150  T
Q  238 ttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    | ||||||||||||||||||| |||||||||| |||||||||||||    
T  12151 taatcatgagatgttgtattttctcttacttgtaatatgagaaata 12196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 281
Target Start/End: Complemental strand, 13355 - 13092
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttg-tgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||| |||||| |||||||||||||| ||||  ||  ||||||| | |||||||||||||||| ||  |||||  ||| ||||||||  |||||||      
T  13355 cttaagattatgactacatgattgattaagattaatttatgagctttccaacttgaacaagttatgttgccttggaaattgtcaatgttgaccggttgtc 13256  T
Q  118 acttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaa 215  Q
    |||||||| | ||||| || |||||||||||||||| |||||| ||||||| |||||||||||| |||| ||| || || | || || | ||||| ||||    
T  13255 acttgatatgaatttt-acgggaaatgattcttttaagtcaatcgtcttatgatctttcgtgaccagcc-tatatgacttagtggagatatgtgattgaa 13158  T
Q  216 ttg-tagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaa 281  Q
    | | || |||||||||||||| |||||||| ||||||||||||| ||||| ||||||||||||||||    
T  13157 tggttacatgttggatatgatgtttatcat-agatgttgtattttctcttgcttggaatatgagaaa 13092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 342 - 407
Target Start/End: Complemental strand, 13005 - 12940
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaag 407  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  13005 gaatgttgtatggacgtaatttcttgataatgctaatgttgtggagatgatcaatataattggaag 12940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 342 - 514
Target Start/End: Original strand, 117958 - 118134
Alignment:
Q  342 gaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtg 440  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  ||| ||    
T  117958 gaatgttgtgtggacgtaatttcttaataatgcaaatgttgtggaggtgatcaatatatttggaagttgtcctttatattgttgtgaaaattatgagatg 118057  T
Q  441 a--ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |  ||||||| | ||||| |||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||||||    
T  118058 atcttgcattgtcgagtctttacttgtatgtcaatgcatcatagtcatgttgagtcttgtagttgtaaaagggttga 118134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 306
Target Start/End: Original strand, 117716 - 117886
Alignment:
Q  137 tggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgat-gaattgt-agatgttggatatg 233  Q
    |||||||| |||||||| | |||||| ||||| |||||||||||||||||| || || |||| || || | |||||| |||| || | ||||||||||||    
T  117716 tggaaatgtttcttttaagccaattgccttatgatctttcgtgactagcct-atatgactaagtggagatatgtgattgaatggttacatgttggatatg 117814  T
Q  234 atatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||||||||||||| || ||  ||||||||||||||    
T  117815 atattcatcat-agatgttatattttctcttacttggaatatgagaaataaatggaatggtgagattatatga 117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 333 - 514
Target Start/End: Complemental strand, 34292 - 34108
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtga-aaa 431  Q
    |||||||  ||||||||| ||||||||| | ||||| ||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||||| |      
T  34292 ttatgacttgaatgttgtgtggacgtaaatacttgataatgcaattgttgaggagatgatcaatatatttggaagttgtcctttatattgttgtgacagt 34193  T
Q  432 ttggaggtga-ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||| | | ||||||||||| |||||| ||||||||||||||    
T  34192 ttggaggtgatttgcattgttgagtccttacttgtatgtccatgcatcaaagtcatgttgagtcttgtagctgtaaaagggttga 34108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 306
Target Start/End: Complemental strand, 34490 - 34345
Alignment:
Q  162 tcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtag-atgttggatatgatatttatcatgagatgttgtatttc 259  Q
    |||||| | ||||||| ||||||| ||| || |||||||||| ||||||| ||| |||| | |||||  |||||| ||||||||| ||||||||||| |     
T  34490 tcttatgacctttcgtaactagccgtatatgactaaatgaagatgtgtgaatgacttgttgtatgtta-atatgaaatttatcataagatgttgtatgtt 34392  T
Q  260 ctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    ||||||||||||||||||||||||| || | | ||| ||||||||||    
T  34391 ctcttacttggaatatgagaaataaatggatcggtgggattatatga 34345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 156 - 283
Target Start/End: Complemental strand, 10642 - 10514
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgt-agatgttggatatgatatttatcatgagatgttgt 254  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||||| |||| |||||||||||| |||||| ||| |||||||||||    
T  10642 caattgttttataatctttagtgactagccttatgtgactaaatgaagttgtgtgatgatttgttagatgttggataggatattaatcgtgagatgttgt 10543  T
Q  255 atttcctcttacttggaatatgagaaata 283  Q
    |||| |||||||||| |||||||||||||    
T  10542 attttctcttacttgtaatatgagaaata 10514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 53 - 249
Target Start/End: Complemental strand, 69836 - 69644
Alignment:
Q  53 tcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttt 152  Q
    |||||||| || |||||||||||||||||||| | ||||| |||||| ||||||||||||| ||||||||||||| ||||||||   | ||||| |||||    
T  69836 tcttgtgaactacaaacttgaacaagttattt-accttgggtattattaatgttagccggt-gctacttgatacgaatttttaccaaatatgatgctttt 69739  T
Q  153 agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattgtagatgttggatatgatatttatcatgagat 249  Q
    || ||||||||| | |||| || |||||||||||||  ||||||||||||||||| |||||||  || ||||||| ||||||||||||||| |||||    
T  69738 agccaattgtct-agaatcctt-gtgactagccttaattgtctaaatgaaggtgtatgatgaaccgtggatgttgaatatgatatttatcaggagat 69644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 98294 - 98420
Alignment:
Q  162 tcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttc 259  Q
    |||||| |||||| |||||||||||||| ||  |||||| || ||||||| |||||||| | |||||| |||||||||||||||| ||||||||||| |     
T  98294 tcttatgatcttttgtgactagccttatatgattaaatgtagatgtgtgaatgaattgttatatgttg-atatgatatttatcataagatgttgtatgtt 98392  T
Q  260 ctcttacttggaatatgagaaataattg 287  Q
    ||||||||||||||||||||||||||||    
T  98393 ctcttacttggaatatgagaaataattg 98420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 30879 - 30793
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  30879 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 30793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 69569 - 69399
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga--ggtgattg 444  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| || ||||||| ||   ||  | |    
T  69569 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggttaaaattgtgaattgttgtcg 69470  T
Q  445 cattattgagtcc--ttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    || ||| ||||||  ||||   |||||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  69469 cactatcgagtcctgttac---atgtccatgcatcatagtcatgttgag-tttgtagttgtaaaagggttgaact 69399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 156 - 289
Target Start/End: Original strand, 23592 - 23727
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| |||||| ||||||||||||||||||| | || ||||||| || | ||||| |||||||| | ||||||||||||||||||||||| ||||||||    
T  23592 caattatcttatgatctttcgtgactagccttgtatgactaaatggagatatgtgaatgaattgttatatgttggatatgatatttatcataagatgttg 23691  T
Q  254 tatttcctcttacttggaatatgagaaataattgaa 289  Q
    ||| | ||||||||||||||||||||||||||||||    
T  23692 tatgttctcttacttggaatatgagaaataattgaa 23727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 138 - 287
Target Start/End: Complemental strand, 30179 - 30028
Alignment:
Q  138 ggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtagatgttggatatgat 235  Q
    ||||||||||||||| || ||||| |||||| |||||||||||||| |||||| || |||||||||| ||| ||| ||||||||    | | ||||||||    
T  30179 ggaaatgattcttttgagccaattatcttatgatctttcgtgactaaccttatatgactaaatgaagatgtatgagtgaattgttatagcttgatatgat 30080  T
Q  236 atttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  30079 atttatcatgagatgttgtatgttctcttacttggaatatgagaaataattg 30028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 332 - 514
Target Start/End: Original strand, 78176 - 78362
Alignment:
Q  332 tttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa 431  Q
    ||||||||  ||||||||| ||||||||| ||||||| ||||| | |||||||||||||||||||||||||||| | ||||||||||||| ||||||| |    
T  78176 tttatgacttgaatgttgtgtggacgtaaattcttgataatgcaattgttgtggagatgatcaatatatttggaggctgtcctttatattattgtgaata 78275  T
Q  432 tt-ggaggtg--attgcattattgagtcctt-actgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttga 514  Q
    ||  ||| ||   ||||||| | ||||| ||  |||||||||||||||| ||| | ||||||||| |||||| ||||||||||||||    
T  78276 ttatgagatggtcttgcattgtcgagtctttgcctgtatgtccatgcatcatagttatgttgagtcttgtaggtgtaaaagggttga 78362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 78036 - 78097
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaa 289  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||||||||||||||||    
T  78036 gatatgatatttatcatgtgatgttgtatgttcccttacttggaatatgagaaataattgaa 78097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 343 - 508
Target Start/End: Original strand, 24966 - 25135
Alignment:
Q  343 aatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaa-ttggaggtga 441  Q
    |||||||| ||||||||| | ||||| ||||  | |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |  |||||||    
T  24966 aatgttgtgtggacgtaaatacttgataatgaaattgttgtggagatgatcaatatatttggaagttgtgctttatactgttgtgaaaagtatgaggtga 25065  T
Q  442 --ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaaag 508  Q
      ||||||| | ||||| || | ||||||||||||||| ||| ||||||||||| |||||| ||||||||    
T  25066 ttttgcattgtcgagtctttgcttgtatgtccatgcatcatagtcatgttgagtcttgtagctgtaaaag 25135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 24729 - 24859
Alignment:
Q  156 caattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttg 253  Q
    ||||| || ||| ||||||||||||||||||||| || |||||| | | ||||||| || ||||| | |||||| |||| |||||||||||||| |||||    
T  24729 caattatcatatgatctttcgtgactagccttatatgactaaataatgatgtgtgaatggattgttatatgttgaatataatatttatcatgaggtgttg 24828  T
Q  254 tatttcctc-ttacttggaatatgagaaata 283  Q
    ||||| ||| ||||||| ||||||| |||||    
T  24829 tattttctcgttacttgaaatatgataaata 24859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 95 - 283
Target Start/End: Complemental strand, 84689 - 84498
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| ||||||||| |||||||||| | |||  | ||||||| |||||||| | || || |||||| |||||| |||||||||||||  ||     
T  84689 attatcaatgttggccggttgccacttgatacggactttatc-ggaaatggttcttttaagccagttatcttatgatcttttgtgactagccttaaatga 84591  T
Q  194 ctaaatgaaggtgtgtga-tgaattgt-agatgttggatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaata 283  Q
    |||||||||| ||||||| |||||| | | ||||||||||||||||||||||| || | |||||||| ||| ||||||| |||||||||||||    
T  84590 ctaaatgaagatgtgtgaatgaattattatatgttggatatgatatttatcataaggtattgtattttctctttacttgaaatatgagaaata 84498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 145506 - 145435
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  145506 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 145435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 52272 - 52244
Alignment:
Q  228 gatatgatatttatcatgagatgttgtat 256  Q
    |||||||||||||||||||||||||||||    
T  52272 gatatgatatttatcatgagatgttgtat 52244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 68575 - 68429
Alignment:
Q  138 ggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgt-agatgttggatatga 234  Q
    ||||||| ||||||| || ||||| |||||| || |||||||||||||||| | || |||||||||||||||||| || ||||| | |||||| ||||||    
T  68575 ggaaatgtttcttttgagccaattatcttatgatatttcgtgactagccttgtatgactaaatgaaggtgtgtgaatggattgttacatgttg-atatga 68477  T
Q  235 tatttatcatgagatgttgtatttcctcttacttggaatatgagaaat 282  Q
    |||||||||| ||||||||||| | |||||||||| ||||||||||||    
T  68476 tatttatcataagatgttgtatgttctcttacttgaaatatgagaaat 68429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 236984 - 236815
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| || |||||||| ||||| || | ||||||||||| ||||||| ||||  | |||||| |||||||| ||| |||||| ||  ||  | ||    
T  236984 tgtatggacatattttcttgataatgcaaaagatgtggagatgaacaatataattgggtgttgtcctatatattgtggtggaaattgtgattgttgtcgc 236885  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||| |||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  236884 attatcgagt-cttgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 59; Significance: 9e-25; HSPs: 4)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 8012 - 8098
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  8012 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattg 8098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 13401 - 13487
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  13401 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattg 13487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 517
Target Start/End: Complemental strand, 18097 - 17941
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgcattattgagtcct 458  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | |||||||| ||  ||  | ||||||| |||| ||    
T  18097 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattgtgattgttgtcgcattatcgagt-ct 17999  T
Q  459 tactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |  |  |||||||||||| ||| ||||||||||  ||||||||||||||| ||||||||    
T  17998 tgttacatgtccatgcatcatagtcatgttgag-attgtagttgtaaaagtgttgaact 17941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 20181 - 20108
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  20181 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 20108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 56; Significance: 6e-23; HSPs: 4)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 348 - 491
Target Start/End: Complemental strand, 20502 - 20356
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttg 444  Q
    ||||||||||| ||||||||| ||||| | ||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||| ||| |||  | |    
T  20502 tgtatggacgtgatttcttgataatgcaattgttgtggatatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgagttgatgtcg 20403  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgag 491  Q
    |||||| ||||| || ||  |||||||||||| ||| || |||||||    
T  20402 cattatcgagtctttgctacatgtccatgcatcatagtcgtgttgag 20356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 348 - 491
Target Start/End: Complemental strand, 27331 - 27185
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--ttg 444  Q
    ||||||||||| ||||||||| ||||| | ||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||| ||| |||  | |    
T  27331 tgtatggacgtgatttcttgataatgcaattgttgtggatatgatcaatatatttggaagttgtcctctatattgtggtgaaaattgtgagttgatgtcg 27232  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgag 491  Q
    |||||| ||||| || ||  |||||||||||| ||| || |||||||    
T  27231 cattatcgagtctttgctacatgtccatgcatcatagtcgtgttgag 27185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 20879 - 20628
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttctt-gtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| |||||||||||||| ||||  || ||| | || |||||||||| |||||| ||||| |||   |||||||||||| || | ||||     
T  20879 cttaagctcatgactacatgattgattaagattaatttgtgcgttttcaaacttgaataagttactttattttgagaattatcaatgttggctgtttgcc 20780  T
Q  118 acttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaa 215  Q
    || ||||  | || |||   |||||||||||||||| |||||||||||||| ||||||||||||||||| ||| || |||| || || | ||||| ||||    
T  20779 acatgatttggatatttgtcggaaatgattcttttaagtcaattgtcttatgatctttcgtgactagcc-tatatgactaagtggagatttgtgattgaa 20681  T
Q  216 ttg-tagatgttggatatgatatttatcatgagatgttgtatttcctcttactt 268  Q
    | | || |||||||||||||| |||| ||| |||| |||||||| |||||||||    
T  20680 tggttacatgttggatatgatgtttaacat-agatattgtattttctcttactt 20628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 27708 - 27457
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttctt-gtgagctt-caaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||||| |||| |||||||||||||| ||||  || ||| | || |||||||||| |||||| ||||| |||   |||||||||||| || | ||||     
T  27708 cttaagctcatgactacatgattgattaagattaatttgtgcgttttcaaacttgaataagttactttattttgagaattatcaatgttggctgtttgcc 27609  T
Q  118 acttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaa 215  Q
    || ||||  | || |||   |||||||||||||||| |||||||||||||| ||||||||||||||||| ||| || |||| || || | ||||| ||||    
T  27608 acatgatttggatatttgtcggaaatgattcttttaagtcaattgtcttatgatctttcgtgactagcc-tatatgactaagtggagatttgtgattgaa 27510  T
Q  216 ttg-tagatgttggatatgatatttatcatgagatgttgtatttcctcttactt 268  Q
    | | || |||||||||||||| |||| ||| |||| |||||||| |||||||||    
T  27509 tggttacatgttggatatgatgtttaacat-agatattgtattttctcttactt 27457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 28861 - 28790
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  28861 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaatatgagaa 28790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 28674 - 28602
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  28674 tttcttgataatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 28602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 131 - 290
Target Start/End: Original strand, 105702 - 105864
Alignment:
Q  131 ttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtgatgaattg-tagat-gttg 227  Q
    ||||| |||||||||| ||||| || ||||||||||  || ||||||||||||||||||||||  ||||||||| ||| |||||| ||| ||||| |||     
T  105702 ttttattggaaatgatcctttttagccaattgtcttccaacctttcgtgactagccttatgtgattaaatgaagatgtatgatgagttgctagatggtta 105801  T
Q  228 gatatgatatttatcatgagatgttgtatttcctc-ttacttggaatatgagaaataattgaaa 290  Q
    |||||||| || ||||| ||||||||| ||| ||| ||||||| ||||||||||||||||||||    
T  105802 gatatgatgttgatcat-agatgttgtgttttctcgttacttgcaatatgagaaataattgaaa 105864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 109282 - 109336
Alignment:
Q  226 tggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||| |||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  109282 tggntatgatatttgtcatgagatgttgtatgttctcttacttggaatatgagaa 109336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 54427 - 54354
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  54427 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 54354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 138 - 283
Target Start/End: Original strand, 198466 - 198614
Alignment:
Q  138 ggaaatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg---atgaattgtag-atgttggatatg 233  Q
    |||||||||| ||| |  ||||| |||||| ||||||||| ||||||||||| || ||| |||||| ||||||   ||||||||| | |||||| |||||    
T  198466 ggaaatgattttttaaaccaattatcttatgatctttcgtaactagccttatatgactagatgaagatgtgtgtgaatgaattgttgtatgttg-atatg 198564  T
Q  234 atatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||| | ||||||||| | ||||||||||||||||||||||||    
T  198565 atatttatcataaaatgttgtatgttctcttacttggaatatgagaaata 198614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 348 - 517
Target Start/End: Original strand, 1984 - 2154
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggaggtgattg--- 444  Q
    ||||||||| |  |||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||  | |  |||       
T  1984 tgtatggacatgttttcttgataatgcaaatgttgtcgagatgatcaatatatttggaagttgtcctttatattgtggtgaaaattgtggattgttgtcg 2083  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||| ||||| ||  |  |||| ||||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  2084 cattatagagtc-ttgttacatgttcatgcatcatagtcatgtagagttt-gtagttgtaaaagggttgaact 2154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 3762 - 3620
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtga-tgaattgtagatgttggatatgat 235  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||||||| || |||| ||||| ||||||| |||||  || ||||||||||||||    
T  3762 ggaaatggttcttttaagccaattatcttatgatctttcgtgactagccttatatgactaa-tgaagatgtgtgaatgaatgttatatgttggatatgat 3664  T
Q  236 atttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||| || |||||||||| ||    ||||||||||||||||||    
T  3663 atttatcataaggtgttgtattttct----cttggaatatgagaaata 3620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 416
Target Start/End: Complemental strand, 3533 - 3450
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtccttt 416  Q
    |||||||  ||||||||| |||||| || | ||||| ||||  | |||||||||||||||||||||||||||||| | ||||||    
T  3533 ttatgacttgaatgttgtgtggacgcaaatacttgataatgaaattgttgtggagatgatcaatatatttggaagttatccttt 3450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 85446 - 85328
Alignment:
Q  168 aatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatttatcatgagatgttgtatttcctc-tt 264  Q
    |||||||||||| |||||||||||| |||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||  |||| ||||| ||| ||    
T  85446 aatctttcgtgattagccttatgtgactaaatgaagatgtgtgaatgaattgttaggtgttggatatgatatttatcatgacttgttatattttctcttt 85347  T
Q  265 acttggaatatgagaaata 283  Q
    | || ||||||||||||||    
T  85346 aatttgaatatgagaaata 85328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 278
Target Start/End: Complemental strand, 26626 - 26482
Alignment:
Q  140 aaatgattcttttagtcaattgtcttataa-tctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattgtagatgttggatatgatat 237  Q
    ||||| |||||| || ||||| |||||||| |||||||||||||||||||| || |||||||||| |||||| |||||||||    ||||||||||||||    
T  26626 aaatggttctttaagccaattatcttataactctttcgtgactagccttatatgactaaatgaagatgtgtgaatgaattgttagggttggatatgatat 26527  T
Q  238 ----ttatcat-gagatgttgtatttcctcttacttggaatatgag 278  Q
        ||||||| ||| |||||||||| || ||||||||||||||||    
T  26526 ttaattatcatagag-tgttgtattttcttttacttggaatatgag 26482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 345 - 492
Target Start/End: Complemental strand, 85230 - 85079
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| ||||||||| | ||||| ||||| | |||||| ||| ||||||||||||||||| | | |||||||||||| |||||| |||  |||||||      
T  85230 tgttgtgtggacgtaaatacttgataatgcaattgttgttgaggtgatcaatatatttggaggttatcctttatattgctgtgaatattatgaggtgatt 85131  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagt 492  Q
    ||||||| | ||||| || | ||||||||||||| | ||| |||||||||||    
T  85130 ttgcattgtcgagtctttgcttgtatgtccatgcttcatagtcatgttgagt 85079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 506
Target Start/End: Complemental strand, 26368 - 26203
Alignment:
Q  345 tgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga-- 441  Q
    |||||| ||||||||| | ||||| ||| | | |||||| ||| ||||||||||| ||||| | | |||||||||||||| |||| |||  |||||||      
T  26368 tgttgtgtggacgtaaatacttgataatccaattgttgttgaggtgatcaatataattggaggttatcctttatattgttatgaatattatgaggtgatt 26269  T
Q  442 ttgcattattgagtccttac-tgtatgtccatgcattatactcatgttgagttttgtagttgtaaa 506  Q
    || |||| | ||||| || | |||||||||||||||  || ||||||||||| |||  ||||||||    
T  26268 ttccattgtcgagtctttgcttgtatgtccatgcatcgtagtcatgttgagtcttgatgttgtaaa 26203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 346 - 491
Target Start/End: Original strand, 6003 - 6151
Alignment:
Q  346 gttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-gaggtga--t 442  Q
    ||||| ||||||||| | ||||| ||||  | |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| |||||||  |    
T  6003 gttgtgtggacgtaaatacttgataatgaaattgttgtggagattatcaatatatttggaagttgtcctctatattgttgtgaaaattgtgaggtgatgt 6102  T
Q  443 tgcattattgagtccttactgtatgtccatgcattatactcatgttgag 491  Q
    |||||||| ||||| || ||   ||||||||||| ||| || |||||||    
T  6103 tgcattatcgagtctttgctacctgtccatgcatcatagtcgtgttgag 6151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 476
Target Start/End: Complemental strand, 7416 - 7270
Alignment:
Q  333 ttatgaccagaatgttgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaat 432  Q
    |||||||  ||||||||| ||||||||| ||||||| ||||  | |||||| ||| ||||||||||||||||| | ||||||||||||||||||| ||||    
T  7416 ttatgacttgaatgttgtgtggacgtaagttcttgataatgtaattgttgtagaggtgatcaatatatttggatgttgtcctttatattgttgtggaaat 7317  T
Q  433 tg-gaggtga--ttgcattattgagtccttactgtatgtccatgcat 476  Q
    || | |||||  | ||||||| ||||| || || |||||||||||||    
T  7316 tgtggggtgatgtcgcattatcgagtctttgctctatgtccatgcat 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 7547 - 7469
Alignment:
Q  228 gatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaacagtgagattatatga 306  Q
    |||||||| |||||||| ||||||||||| |||||||| ||||| |||||||||||| || ||  |||||| |||||||    
T  7547 gatatgatgtttatcataagatgttgtatgtcctcttagttggagtatgagaaataaatggaatggtgagactatatga 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 95298 - 95227
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  95298 tgatgaatcgtagatgttgaatatgatatttatcatgagatgctgttttccctcttacttggaatatgagaa 95227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 6686 - 6600
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||| | |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  6686 tgtatggacatgttttcttgataattcaaatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 8882 - 8712
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattggag---gtgattg 444  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||  |   ||  | |    
T  8882 tgtatggacatgttttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattgtggattgttgtcg 8783  T
Q  445 cattattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||| |||| |||  |  |||||||||||| ||| || ||||||| |||||||||||||||||||||||||    
T  8782 cattatcgagt-cttgttacatgtccatgcatcatagtcttgttgag-tttgtagttgtaaaagggttgaact 8712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 243
Target Start/End: Complemental strand, 9185 - 8963
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttc-ttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgcta 118  Q
    ||||||||||||| | ||| |||||||| || | | |||| | || |||||||||||||||||| | |||||||| || | ||||||||||| || ||||    
T  9185 cttaagcttatgagttcataattgattaagactaccttgttaactacaaacttgaacaagttatat-atcttggt-ataaccaatgttagccagt-gcta 9089  T
Q  119 cttgatacgtatttttactggaaatgattcttttagtcaattgtcttataatctttcgtgactag----ccttatgtgtctaaatgaaggtgtgtgatga 214  Q
    ||||||||| ||||| ||   | ||||| ||||||| ||||||||| | |||| || ||||||||    |||||  ||||||||||||||||| ||||||    
T  9088 cttgatacgaatttt-accaaatatgatgcttttagccaattgtct-agaatcctt-gtgactagatagccttaattgtctaaatgaaggtgtatgatga 8992  T
Q  215 attgtagatgttggatatgatatttatca 243  Q
    |  |||||||||| ||||| |||||||||    
T  8991 accgtagatgttgaatatgttatttatca 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 13777 - 13882
Alignment:
Q  141 aatgattcttttagtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattg-tagatgttggatatgatatt 238  Q
    |||| |||||| |||||||| ||||||||   ||||||||||||||||| ||||||||||| | |||||| || ||||| ||||||||||||||||||||    
T  13777 aatggttctttaagtcaattatcttataactcttcgtgactagccttatatgtctaaatgacgatgtgtgaataaattgttagatgttggatatgatatt 13876  T
Q  239 tatcat 244  Q
    ||||||    
T  13877 tatcat 13882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 382 - 508
Target Start/End: Original strand, 14005 - 14135
Alignment:
Q  382 gtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt-ggaggtga--ttgcattattgagtccttac-tgtatgtccatgcatt 477  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||| |||  |||||||  ||||||| |  |||| || | |||| ||||||||||     
T  14005 gtggaggtgatcaatataattggaagttgtcctttatattgttgtgaatattatgaggtgattttgcattgtcaagtctttgcttgtacgtccatgcatc 14104  T
Q  478 atactcatgttgagttttgtagttgtaaaag 508  Q
    ||| ||||||||||| ||| |||||||||||    
T  14105 atagtcatgttgagtcttgaagttgtaaaag 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 10455 - 10382
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  10455 tttcttgataatgcaaatgttgtggagatgatcaatatatatggaagttgtcctctatattgtggtgaaaattg 10382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 138287 - 138338
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  138287 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 138338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 168 - 104
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaat 273  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  168 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgttttccctcttacttggaat 104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 1340 - 1270
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  1340 tgatgaattgtagatgttgaatataatatttatcatgagatgttgt-ttccctattacttggaatatgagaa 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 6036 - 5867
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  | ||    
T  6036 tgtatggacatgttttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgagattgttgtcgc 5937  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||| |||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  5936 attatcgagt-cttgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 1154 - 1081
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  1154 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 280
Target Start/End: Original strand, 1256 - 1522
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatttcttgtgagcttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgctac 119  Q
    |||||||| |||| |||||||||||||| ||||  ||| ||||||  ||||||   |||||  ||| ||||||  |||||||||||| |||| |||| ||    
T  1256 cttaagctcatgactacatgattgattaagattgtttgagagctttcaacttgtctaagtttctttgtcttgggaattatcaatgttggccgtttgccac 1355  T
Q  120 ttgatacgtatttttactggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtg-----tgatg 213  Q
    ||||||||  ||||  | | ||||| ||| ||| |  ||||| |||||| |||| ||||||||| |||||| || |||| ||| ||||||     || ||    
T  1356 ttgatacggtttttgtcag-aaatgtttcctttgaaccaattttcttatgatctatcgtgactatccttatatgactaagtgatggtgtggttgatgttg 1454  T
Q  214 aattgt-agatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
     || || | |||||||||||||||||| |||||||||||||||| |  ||||||||||||||||||||    
T  1455 gatggttatatgttggatatgatatttgtcatgagatgttgtatgttatcttacttggaatatgagaa 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 6694 - 6780
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||| ||| ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  6694 tgtatggacatgttttcatgataatgcaaattttgtggagatgatcaatataattggaagttgtcctttatattgtggtgaaaattg 6780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 2194 - 2136
Alignment:
Q  376 aatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  2194 aatgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 2136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 433
Target Start/End: Complemental strand, 3463 - 3378
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaatt 433  Q
    ||||||||| || |||||||| ||||| ||||||||||| |||||||||||| |||| || |||||| |||||||| |||||||||    
T  3463 tgtatggacatattttcttgataatgcaaatgttgtggatatgatcaatataattgggagttgtcctatatattgtggtgaaaatt 3378  T

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Target: scaffold0434; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 3344 - 3293
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || |||||||||| ||||||| ||||||||||||||    
T  3344 atgtccatgcatcatagtcttgttgagttt-gtagttgaaaaagggttgaact 3293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 32373 - 32300
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  32373 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 32300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 290
Target Start/End: Complemental strand, 32547 - 32480
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||| |||| ||||||||| ||||||    
T  32547 tgttgaatatgatatttatcatgagatgttgtatgttctcttacttagaatgtgagaaatacttgaaa 32480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 434
Target Start/End: Original strand, 2856 - 2912
Alignment:
Q  378 tgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  2856 tgttgtggagatgatcaatatatttggaagttgtcctctatattgtggtgaaaattg 2912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 53283 - 53215
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatg 276  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  53283 tgatgaatcgtagatgttgaatatgatatttatcatgagatgttgtttttccctcttacttagaatatg 53215  T

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Target: scaffold0234 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 18763 - 18834
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||  ||||||||| |||||||||||||||| ||||||||| || |||||||||||||| |||||||    
T  18763 tgatgaatcatagatgttgaatatgatatttatcattagatgttgttttccctcttacttggaagatgagaa 18834  T

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Target: scaffold0597 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 2329 - 2387
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  2329 atgttgaatatgatatttatcatgagatgttgttttccctattacttggaatatgagaa 2387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 2490 - 2576
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  2490 tgtatggacatgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 2576  T

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Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 15061 - 15119
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  15061 atgttggatatgatatttgtcatgaaatgttgtatgttctcttacttggaatatgagaa 15119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 15234 - 15306
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  15234 tttcttgataatgc-aatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 15306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 2773 - 2831
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  2773 atgttggatatgatatttgtcatgagatgttgtatgttctcttacttgggatatgagaa 2831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Original strand, 23057 - 23143
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| || || |||| ||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||||    
T  23057 tgtatggacatgttttcttgataaagcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattg 23143  T

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Target: scaffold0023 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 155552 - 155610
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||||||||||||||||    
T  155552 atgttggatatgatatttgtcatgacatgttgtatgttctcttacttggaatatgagaa 155610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 4920 - 4847
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||| || |||||| |||||||| ||||||||||    
T  4920 tttcttgataatgcaaatgatgtggagatgatcaatataattgggagttgtcctatatattgtggtgaaaattg 4847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 4814 - 4763
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  4814 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 4763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 95 - 290
Target Start/End: Complemental strand, 4933 - 4738
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattctttta-gtcaattgtcttataatctttcgtgactagccttatgtgt 193  Q
    |||||||||||| |||| |||| || ||||| | ||||||   |||||||||||||||| | |||||||||||| | |||||||||| ||||| || ||     
T  4933 attatcaatgttggccgtttgccacatgatatggatttttgtcggaaatgattcttttaagccaattgtcttatgacctttcgtgaccagcct-atatga 4835  T
Q  194 ctaaatgaaggtgtgtgat-gaattgtagatgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattgaaa 290  Q
    |||| || || ||||| || |||| ||     || |||||||| |||||||| ||||||||||||| ||||| |||||| |||||||||||| |||||    
T  4834 ctaagtggagatgtgtaattgaatggttacactttgatatgatgtttatcat-agatgttgtattttctcttgcttggattatgagaaataaatgaaa 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 434
Target Start/End: Complemental strand, 4644 - 4559
Alignment:
Q  349 gtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| || ||| ||||  |||| |||||||||||||||||||| ||| |||| || |||||| |||||||| ||||||||||    
T  4644 gtatggacatattttattgatgatgcaaatgttgtggagatgatcaaaataattgggagttgtcctatatattgtggtgaaaattg 4559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 71823 - 71896
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||||||||||| |||| || | |||| |||||||| ||||||||||    
T  71823 tttcttgataatgcaaatgttgtggagatgatcaatataattgggagttatcctatatattgtggtgaaaattg 71896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 91043 - 91107
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaataattg 287  Q
    |||||||||||||||||||||| ||||||||||| |  |||||| ||||||||||||||| ||||    
T  91043 tgttggatatgatatttatcataagatgttgtatgttttcttacctggaatatgagaaatgattg 91107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 90764 - 90813
Alignment:
Q  138 ggaaatgattctttta-gtcaattgtcttataatctttcgtgactagcct 186  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  90764 ggaaatgattcttttaagccaattgtcttatgatctttcgtgactagcct 90813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold1753
Description:

Target: scaffold1753; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 422 - 371
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatg 276  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  422 ttggatatgatgtttatcatgagatgttgtttttcctattacttggaatatg 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1753; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 264 - 178
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| || |||||||| ||||| |||| ||||||||||| |||||||  ||| || |||||| |||||||| | ||||||||    
T  264 tgtatggacatattttcttgataatgcaaatgatgtggagatgaacaatataactgggagttgtcctatatattgtggagaaaattg 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 517
Target Start/End: Complemental strand, 3428 - 3259
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg-ga-ggtgattgc 445  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||||| |||||||||| ||  ||  | ||    
T  3428 tgtatggacatgttttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattgagattgttgtcgc 3329  T
Q  446 attattgagtccttactgtatgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    ||||| |||| |||  |  |||||||||||| ||| || |||||||  ||||||||||||||||||||||||    
T  3328 attatcgagt-cttgttacatgtccatgcatcatagtcgtgttgag-attgtagttgtaaaagggttgaact 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 432
Target Start/End: Complemental strand, 145734 - 145648
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaat--atatttggaagatgtcctttatattgttgtgaaaat 432  Q
    ||||||||| |  |||||||| ||||| |||||||||||||||||||||  |||| |||||| |||||| |||||||| ||||||||    
T  145734 tgtatggacatgttttcttgataatgctaatgttgtggagatgatcaatatatatatggaagttgtcctctatattgtggtgaaaat 145648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 17612 - 17554
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||||||||||||| || ||| |||| |||||||||||||    
T  17612 atgttgaatatgatatttatcatgagatgttgttttccctattacctggaatatgagaa 17554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 41671 - 41613
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| ||||||||||||||||||||| |||| || ||| ||||||||||||||||||    
T  41671 atgttgaatatgatatttatcatgagatattgttttccctattacttggaatatgagaa 41613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 38528 - 38586
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||    
T  38528 atgttggatatgatatttgtcataagatgttgtatgttctcttacttgggatatgagaa 38586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 38703 - 38776
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||| | | ||||||||    
T  38703 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattatggagaaaattg 38776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 40281 - 40208
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  40281 tttcttgataatgcaaatgatgtggagatgaacaatataattggctgttgtcctatatattgtggagaaaattg 40208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 223 - 281
Target Start/End: Complemental strand, 59536 - 59478
Alignment:
Q  223 tgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaa 281  Q
    |||||||||||||||||||||| ||| ||||||| |  |||||||||||||||||||||    
T  59536 tgttggatatgatatttatcataagacgttgtatgttatcttacttggaatatgagaaa 59478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 469 - 517
Target Start/End: Complemental strand, 56620 - 56573
Alignment:
Q  469 ccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||| ||| |||||||||| || ||||||||||||||||||||||    
T  56620 ccatgcatcatagtcatgttgagatt-gtagttgtaaaagggttgaact 56573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 6142 - 6084
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    ||||||||||||||| || |||||||||||||||| | ||||||||||| |||||||||    
T  6142 atgttggatatgataattgtcatgagatgttgtatgttctcttacttgggatatgagaa 6084  T

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Target: scaffold0338 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 7583 - 7510
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||| ||||||||||||||||| |||| ||  ||||| |||||||| ||||||||||    
T  7583 tttcttgataatgcaaatgttttggagatgatcaatataattgggagtggtcctatatattgtggtgaaaattg 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 25862 - 25806
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||    
T  25862 ttggatatgatgtttatcatgagatgttgtttttccctattacttggaatatgagaa 25806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 21607 - 21551
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtattt-cctcttacttggaatatgagaa 280  Q
    ||||||||||| |||||||||| ||||||| ||| ||| ||||||||||||||||||    
T  21607 ttggatatgatgtttatcatgacatgttgtttttccctattacttggaatatgagaa 21551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 12421 - 12374
Alignment:
Q  236 atttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  12421 atttatcataagatgttgtatgttctcttacttggaatatgagaaata 12374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 219
Target Start/End: Original strand, 1208 - 1291
Alignment:
Q  138 ggaaatgattctttt-agtcaattgtcttataatctttcgtgactagccttatgtgtctaaatgaaggtgtgtg-atgaattgt 219  Q
    ||||||||||||||| |||||||| |||||| ||  ||||||| ||||||||| || |||||||||| |||||| |||||||||    
T  1208 ggaaatgattcttttaagtcaattatcttatgattcttcgtgagtagccttatatgactaaatgaagatgtgtgaatgaattgt 1291  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 78513 - 78458
Alignment:
Q  225 ttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||||||||  ||||||||||||||||| || ||| ||||||||||||||||||    
T  78513 ttggatatgatgattatcatgagatgttgttttccctattacttggaatatgagaa 78458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 39001 - 38928
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  39001 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 38928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 44588 - 44515
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  44588 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 44515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 2888 - 2946
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaa 280  Q
    |||||| |||||||||||||||| |||||| || || ||| ||||||||||||||||||    
T  2888 atgttgaatatgatatttatcattagatgtcgttttccctattacttggaatatgagaa 2946  T

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Target: scaffold0240 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 6350 - 6264
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  6350 tgtatggacatgttttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgtcctatatattgaggtgaaaattg 6264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 13001 - 12915
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| ||||||||||    
T  13001 tgtatggacatgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggtgaaaattg 12915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 13162 - 13134
Alignment:
Q  223 tgttggatatgatatttatcatgagatgt 251  Q
    |||||||||||||||||||||||||||||    
T  13162 tgttggatatgatatttatcatgagatgt 13134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 16898 - 16838
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  16898 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 16838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 35448 - 35508
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgtatttcctcttacttggaatatgagaaata 283  Q
    ||||||||||||||||| | |||||| |||||||| | ||||||||||| ||||||||||||    
T  35448 atgttggatatgatattaa-catgaggtgttgtatgttctcttacttggtatatgagaaata 35508  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 52646 - 52719
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| |||||||||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  52646 tttcttgataatgcgaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 52719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 56598 - 56671
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| |||||||||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  56598 tttcttgataatgcgaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 56671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 186
Target Start/End: Complemental strand, 227 - 135
Alignment:
Q  95 attatcaatgttagccggttgctacttgatacgtatttttactggaaatgattc-ttttagtcaattgtcttataatctttcgtgactagcct 186  Q
    |||||||||||| | || |||| || ||||  | |||||||  ||||||||||| ||||||  ||||||||| ||||||||||||||||||||    
T  227 attatcaatgttggtcgtttgccacatgatttggatttttatcggaaatgattccttttagcgaattgtcttgtaatctttcgtgactagcct 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 70874 - 70925
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| |||||||||| || ||||||||||||||||||||||    
T  70874 atgtccatgcatcatagtcatgttgagatt-gtagttgtaaaagggttgaact 70925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 279
Target Start/End: Complemental strand, 5700 - 5653
Alignment:
Q  232 tgatatttatcatgagatgttgtatttcctcttacttggaatatgaga 279  Q
    ||||||||||||| ||||||||||| |  |||||||||||||||||||    
T  5700 tgatatttatcataagatgttgtatgttatcttacttggaatatgaga 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 23902 - 23863
Alignment:
Q  209 tgatgaattgtagatgttggatatgatatttatcatgaga 248  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  23902 tgatgaattgtagatgttgaatatgatattgatcatgaga 23863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 434
Target Start/End: Original strand, 765 - 839
Alignment:
Q  360 atttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| ||||| |||||||||||| | ||||||||| ||||  | |||||| |||||||  ||||||||||    
T  765 atttcttgataatgcaaatgttgtggaggtaatcaatataattgggtgttgtcctatatattgaggtgaaaattg 839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 352 - 434
Target Start/End: Original strand, 13557 - 13639
Alignment:
Q  352 tggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||| || |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  13557 tggacatattttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 13639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 13671 - 13722
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  13671 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 422
Target Start/End: Complemental strand, 14470 - 14408
Alignment:
Q  360 atttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattg 422  Q
    ||||||||| ||||| ||| |||||||||||||||||||| ||||  | |||||| |||||||    
T  14470 atttcttgataatgcaaatattgtggagatgatcaatataattgggtgttgtcctatatattg 14408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 434
Target Start/End: Complemental strand, 27824 - 27738
Alignment:
Q  348 tgtatggacgtaatttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    ||||||||| |  |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  27824 tgtatggacatgttttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 27738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 361 - 399
Target Start/End: Complemental strand, 21449 - 21411
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatata 399  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  21449 tttcttgataatgcaaatgttgtggagatgatcaatata 21411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 8223 - 8150
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||| ||||||||| ||||  | ||| || |||||||  ||||||||||    
T  8223 tttcttgataatgcaaatgttgtggagataatcaatataattgggtgttgttctatatattgaggtgaaaattg 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 6937 - 6828
Alignment:
Q  20 cttaagcttatgattacatgattgattatgatt-tcttgtgag-cttcaaacttgaacaagttattttatcttggttattatcaatgttagccggttgct 117  Q
    |||||| | |||||||||||| |||||| ||||   |||||||  |||||||||||| |||||| ||||| ||||  ||||||||||||  ||| ||||     
T  6937 cttaagttcatgattacatgagtgattaagattgagttgtgagttttcaaacttgaataagttactttattttgggaattatcaatgttgtccgtttgcc 6838  T
Q  118 acttgatacg 127  Q
    ||||||||||    
T  6837 acttgatacg 6828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 30; Significance: 0.0000002; HSPs: 4)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 868 - 795
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  868 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 15124 - 15051
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  15124 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 15051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 929 - 897
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgt 254  Q
    |||||| ||||||||||||||||||||||||||    
T  929 atgttgaatatgatatttatcatgagatgttgt 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 15185 - 15153
Alignment:
Q  222 atgttggatatgatatttatcatgagatgttgt 254  Q
    |||||| ||||||||||||||||||||||||||    
T  15185 atgttgaatatgatatttatcatgagatgttgt 15153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 4970 - 5043
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  4970 tttcttgataatgcaaatgatgtggagatgaacaatataattgggtgttgtcctatatattgtggagaaaattg 5043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Original strand, 32563 - 32636
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||| ||||||||||| ||||||| ||||  | |||||| |||||||| | ||||||||    
T  32563 tttcttgataatgcaaatgatgtggagatgaacaatataattggctgttgtcctatatattgtggagaaaattg 32636  T

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Target: scaffold0184; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 34141 - 34068
Alignment:
Q  361 tttcttgagaatgcgaatgttgtggagatgatcaatatatttggaagatgtcctttatattgttgtgaaaattg 434  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||  | |||||| |||||| | | ||||||||    
T  34141 tttcttgataatgcaaatgttgtggagatgaacaatataattgggtgttgtcctatatattatggagaaaattg 34068  T

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Target: scaffold0120 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Complemental strand, 27259 - 27208
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  27259 atgtccatgcatcatagtcttgttgagatt-gtagttgtaaaagggttgaact 27208  T

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Target: scaffold0068 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 47089 - 47061
Alignment:
Q  223 tgttggatatgatatttatcatgagatgt 251  Q
    |||||||||||||||||||||||||||||    
T  47089 tgttggatatgatatttatcatgagatgt 47061  T

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Target: scaffold0068; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 60537 - 60509
Alignment:
Q  223 tgttggatatgatatttatcatgagatgt 251  Q
    |||||||||||||||||||||||||||||    
T  60537 tgttggatatgatatttatcatgagatgt 60509  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 249016 - 249067
Alignment:
Q  465 atgtccatgcattatactcatgttgagttttgtagttgtaaaagggttgaact 517  Q
    |||||||||||| ||| || ||||||| || ||||||||||||||||||||||    
T  249016 atgtccatgcatcatagtcgtgttgagatt-gtagttgtaaaagggttgaact 249067  T

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