View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6277_low_23 (Length: 408)

Name: NF6277_low_23
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6277_low_23
NF6277_low_23
[»] chr2 (40 HSPs)
chr2 (19-206)||(41249651-41249839)
chr2 (222-400)||(40027138-40027316)
chr2 (223-398)||(11090520-11090695)
chr2 (223-400)||(40815714-40815891)
chr2 (227-385)||(22374323-22374481)
chr2 (227-400)||(239356-239528)
chr2 (227-400)||(1978111-1978284)
chr2 (224-397)||(14432142-14432315)
chr2 (227-400)||(18451200-18451373)
chr2 (222-385)||(26538095-26538258)
chr2 (227-400)||(43058336-43058509)
chr2 (227-398)||(28616616-28616788)
chr2 (223-400)||(3025465-3025641)
chr2 (212-385)||(26538462-26538636)
chr2 (226-385)||(8425744-8425903)
chr2 (227-384)||(22374709-22374867)
chr2 (221-362)||(20444746-20444887)
chr2 (222-384)||(18450828-18450991)
chr2 (227-362)||(35779711-35779846)
chr2 (214-384)||(40027524-40027695)
chr2 (227-384)||(7446730-7446888)
chr2 (227-384)||(40815348-40815506)
chr2 (227-362)||(35781070-35781205)
chr2 (222-380)||(7446340-7446497)
chr2 (227-384)||(11090904-11091062)
chr2 (227-350)||(1978528-1978651)
chr2 (227-362)||(8972240-8972375)
chr2 (227-362)||(20440439-20440573)
chr2 (222-384)||(28616998-28617161)
chr2 (231-384)||(239736-239890)
chr2 (226-383)||(8425357-8425514)
chr2 (227-384)||(43058717-43058874)
chr2 (227-383)||(3025848-3026003)
chr2 (227-362)||(15551502-15551637)
chr2 (227-341)||(28847123-28847237)
chr2 (227-384)||(14432525-14432683)
chr2 (227-350)||(15552473-15552595)
chr2 (227-400)||(28143400-28143572)
chr2 (222-362)||(3824116-3824256)
chr2 (221-382)||(31797166-31797326)
[»] chr7 (27 HSPs)
chr7 (223-400)||(19830419-19830596)
chr7 (220-400)||(37786763-37786943)
chr7 (217-400)||(4641433-4641616)
chr7 (227-400)||(19590528-19590701)
chr7 (220-400)||(38858639-38858819)
chr7 (221-400)||(29100220-29100399)
chr7 (227-398)||(32004985-32005156)
chr7 (227-398)||(2659211-2659382)
chr7 (227-398)||(34534162-34534333)
chr7 (227-398)||(35289272-35289443)
chr7 (230-385)||(23953113-23953268)
chr7 (227-384)||(19590909-19591067)
chr7 (223-385)||(4478084-4478246)
chr7 (227-384)||(38859025-38859183)
chr7 (217-383)||(32004607-32004774)
chr7 (227-384)||(2658842-2659000)
chr7 (227-384)||(34533794-34533952)
chr7 (227-382)||(37787153-37787309)
chr7 (220-384)||(19830804-19830968)
chr7 (227-366)||(28583442-28583581)
chr7 (237-350)||(29099863-29099976)
chr7 (227-340)||(35288906-35289019)
chr7 (227-341)||(23952733-23952848)
chr7 (227-362)||(28584329-28584464)
chr7 (227-362)||(38160954-38161089)
chr7 (227-384)||(4641828-4641983)
chr7 (223-275)||(787281-787333)
[»] chr3 (56 HSPs)
chr3 (212-400)||(41046688-41046876)
chr3 (223-400)||(5136979-5137156)
chr3 (227-400)||(39555946-39556119)
chr3 (227-400)||(31779021-31779194)
chr3 (227-398)||(20840563-20840734)
chr3 (221-400)||(37726926-37727105)
chr3 (227-400)||(24300925-24301098)
chr3 (228-400)||(22425182-22425354)
chr3 (221-400)||(23644459-23644638)
chr3 (227-400)||(26837725-26837897)
chr3 (230-379)||(48452995-48453144)
chr3 (222-400)||(17464860-17465039)
chr3 (227-385)||(43973444-43973602)
chr3 (227-400)||(25853596-25853769)
chr3 (227-398)||(32535330-32535505)
chr3 (222-400)||(27393946-27394124)
chr3 (227-400)||(30104485-30104657)
chr3 (223-400)||(26274936-26275112)
chr3 (227-384)||(4275748-4275906)
chr3 (227-384)||(37727314-37727472)
chr3 (227-384)||(43973824-43973982)
chr3 (221-350)||(32534956-32535085)
chr3 (220-384)||(39555574-39555739)
chr3 (221-384)||(20840945-20841109)
chr3 (222-384)||(27393659-27393822)
chr3 (222-384)||(30098147-30098310)
chr3 (227-384)||(17464494-17464652)
chr3 (227-384)||(25853237-25853395)
chr3 (221-384)||(31778650-31778814)
chr3 (224-362)||(25612384-25612522)
chr3 (227-385)||(29801799-29801958)
chr3 (227-384)||(5137365-5137523)
chr3 (227-384)||(22424817-22424975)
chr3 (227-345)||(29801359-29801477)
chr3 (223-384)||(26837359-26837521)
chr3 (221-384)||(26274564-26274728)
chr3 (227-362)||(23228415-23228549)
chr3 (227-362)||(50116816-50116951)
chr3 (227-384)||(23644849-23645007)
chr3 (221-384)||(24300554-24300717)
chr3 (227-362)||(51474740-51474876)
chr3 (227-362)||(32697108-32697242)
chr3 (220-384)||(41047083-41047246)
chr3 (227-368)||(25420542-25420683)
chr3 (218-362)||(37220551-37220695)
chr3 (227-362)||(45965941-45966076)
chr3 (227-338)||(51473431-51473542)
chr3 (230-351)||(25419150-25419273)
chr3 (227-310)||(37222030-37222113)
chr3 (259-352)||(18010162-18010255)
chr3 (225-351)||(32695704-32695830)
chr3 (340-385)||(29801532-29801577)
chr3 (287-362)||(23227319-23227394)
chr3 (227-401)||(49407799-49407972)
chr3 (329-400)||(55192222-55192293)
chr3 (323-400)||(50900898-50900975)
[»] scaffold0295 (2 HSPs)
scaffold0295 (227-400)||(4796-4969)
scaffold0295 (227-338)||(5222-5333)
[»] chr6 (35 HSPs)
chr6 (227-400)||(10900299-10900472)
chr6 (227-400)||(18257140-18257313)
chr6 (222-400)||(15828010-15828188)
chr6 (227-400)||(11276951-11277124)
chr6 (227-400)||(20741103-20741276)
chr6 (227-384)||(2319675-2319832)
chr6 (227-400)||(31470685-31470858)
chr6 (227-398)||(1149802-1149974)
chr6 (227-398)||(12935528-12935699)
chr6 (218-384)||(23075512-23075679)
chr6 (227-400)||(11444990-11445163)
chr6 (227-400)||(28472640-28472812)
chr6 (227-400)||(29859829-29860001)
chr6 (225-400)||(2322588-2322762)
chr6 (227-400)||(18505288-18505461)
chr6 (227-384)||(12935160-12935318)
chr6 (226-385)||(10899941-10900101)
chr6 (227-384)||(11445371-11445529)
chr6 (227-384)||(22219737-22219895)
chr6 (227-385)||(4811375-4811533)
chr6 (225-384)||(18504920-18505080)
chr6 (222-385)||(23073997-23074149)
chr6 (222-384)||(31470313-31470476)
chr6 (220-384)||(20741485-20741653)
chr6 (227-341)||(18257565-18257679)
chr6 (222-360)||(3835135-3835273)
chr6 (221-384)||(11276587-11276751)
chr6 (227-362)||(29033437-29033573)
chr6 (227-362)||(29035044-29035179)
chr6 (227-350)||(15827641-15827766)
chr6 (227-332)||(4811693-4811798)
chr6 (227-362)||(18296148-18296282)
chr6 (227-312)||(1149468-1149553)
chr6 (317-399)||(35163557-35163639)
chr6 (227-280)||(22534214-22534267)
[»] chr1 (40 HSPs)
chr1 (220-400)||(50970647-50970827)
chr1 (222-400)||(29869618-29869796)
chr1 (222-400)||(5962947-5963125)
chr1 (227-385)||(29306956-29307114)
chr1 (223-400)||(15173095-15173272)
chr1 (227-400)||(18984122-18984295)
chr1 (221-385)||(5540202-5540366)
chr1 (227-400)||(33144288-33144461)
chr1 (222-385)||(15646579-15646742)
chr1 (227-400)||(8678911-8679083)
chr1 (227-385)||(39154022-39154180)
chr1 (227-400)||(9018976-9019149)
chr1 (227-400)||(17433219-17433392)
chr1 (227-400)||(21856412-21856585)
chr1 (227-385)||(17433598-17433757)
chr1 (227-398)||(26859431-26859601)
chr1 (227-385)||(29307325-29307484)
chr1 (227-384)||(15646195-15646353)
chr1 (227-382)||(50970281-50970437)
chr1 (227-384)||(5539819-5539977)
chr1 (227-341)||(8678544-8678658)
chr1 (227-384)||(21856045-21856203)
chr1 (227-384)||(29870003-29870161)
chr1 (227-383)||(4636356-4636513)
chr1 (232-384)||(33143925-33144078)
chr1 (222-350)||(18984538-18984666)
chr1 (222-384)||(39154404-39154567)
chr1 (227-384)||(15173478-15173635)
chr1 (227-393)||(9019338-9019505)
chr1 (227-341)||(26859062-26859176)
chr1 (222-362)||(52268288-52268428)
chr1 (284-398)||(4636033-4636146)
chr1 (227-384)||(5962581-5962739)
chr1 (227-340)||(52269177-52269290)
chr1 (232-324)||(47827033-47827125)
chr1 (227-310)||(2733416-2733499)
chr1 (227-384)||(17112285-17112442)
chr1 (227-299)||(47826967-47827039)
chr1 (227-385)||(44802556-44802714)
chr1 (221-277)||(17641862-17641918)
[»] chr5 (45 HSPs)
chr5 (227-400)||(5819298-5819471)
chr5 (227-400)||(2865124-2865297)
chr5 (227-400)||(18183338-18183511)
chr5 (227-400)||(8647441-8647614)
chr5 (227-400)||(19359139-19359312)
chr5 (214-400)||(8460920-8461106)
chr5 (227-400)||(15708974-15709146)
chr5 (223-385)||(15372257-15372419)
chr5 (227-385)||(24362220-24362378)
chr5 (227-400)||(164560-164733)
chr5 (222-385)||(29455126-29455289)
chr5 (223-384)||(18182969-18183131)
chr5 (227-396)||(14215616-14215785)
chr5 (223-384)||(5818928-5819090)
chr5 (230-384)||(24361843-24361997)
chr5 (220-400)||(16018585-16018763)
chr5 (227-384)||(2864757-2864915)
chr5 (227-384)||(8647822-8647980)
chr5 (227-384)||(14215244-14215402)
chr5 (227-384)||(19359520-19359678)
chr5 (230-384)||(24325218-24325372)
chr5 (246-388)||(25000112-25000254)
chr5 (227-400)||(24331929-24332106)
chr5 (227-385)||(14463905-14464062)
chr5 (212-384)||(29454728-29454901)
chr5 (222-384)||(8461315-8461478)
chr5 (221-385)||(25000472-25000637)
chr5 (223-385)||(16018970-16019133)
chr5 (227-383)||(164194-164350)
chr5 (227-384)||(24331562-24331722)
chr5 (227-362)||(7349424-7349559)
chr5 (227-384)||(15709353-15709510)
chr5 (227-344)||(4222147-4222264)
chr5 (225-365)||(6019174-6019314)
chr5 (227-366)||(7348562-7348701)
chr5 (227-366)||(4219666-4219804)
chr5 (227-337)||(15371874-15371983)
chr5 (227-362)||(4623151-4623284)
chr5 (227-342)||(6018317-6018431)
chr5 (237-362)||(4624632-4624757)
chr5 (277-362)||(13814135-13814224)
chr5 (306-350)||(14462686-14462730)
chr5 (341-385)||(24325595-24325639)
chr5 (329-400)||(27307428-27307499)
chr5 (223-365)||(20266320-20266462)
[»] scaffold0273 (2 HSPs)
scaffold0273 (227-400)||(4576-4749)
scaffold0273 (263-384)||(4242-4364)
[»] chr4 (63 HSPs)
chr4 (227-400)||(33109687-33109860)
chr4 (227-400)||(25937673-25937846)
chr4 (227-400)||(46193774-46193947)
chr4 (227-400)||(11153516-11153689)
chr4 (227-400)||(12234332-12234505)
chr4 (227-400)||(48526199-48526371)
chr4 (227-394)||(25447611-25447778)
chr4 (222-400)||(15523603-15523781)
chr4 (223-400)||(22434547-22434722)
chr4 (227-385)||(23494446-23494604)
chr4 (227-385)||(38962203-38962361)
chr4 (227-400)||(4219560-4219733)
chr4 (227-400)||(51020800-51020973)
chr4 (223-400)||(54995437-54995613)
chr4 (221-400)||(22170306-22170484)
chr4 (227-384)||(22434182-22434340)
chr4 (227-384)||(45082808-45082966)
chr4 (220-400)||(2118665-2118844)
chr4 (227-384)||(12234713-12234871)
chr4 (223-400)||(45082431-45082606)
chr4 (218-384)||(25447241-25447408)
chr4 (227-385)||(46193408-46193567)
chr4 (219-384)||(48526565-48526731)
chr4 (223-384)||(54995068-54995230)
chr4 (227-384)||(20470895-20471053)
chr4 (227-383)||(15523238-15523395)
chr4 (227-340)||(23494872-23494985)
chr4 (222-384)||(18751597-18751760)
chr4 (223-384)||(4219943-4220105)
chr4 (220-350)||(25938090-25938220)
chr4 (221-384)||(11153143-11153307)
chr4 (242-362)||(43243688-43243807)
chr4 (227-338)||(18763951-18764062)
chr4 (227-350)||(33109883-33110006)
chr4 (213-350)||(2118282-2118419)
chr4 (292-400)||(12503805-12503913)
chr4 (227-362)||(20958268-20958401)
chr4 (223-362)||(48713753-48713892)
chr4 (227-384)||(51021180-51021337)
chr4 (242-365)||(43281195-43281317)
chr4 (231-365)||(20957196-20957330)
chr4 (220-360)||(16690932-16691072)
chr4 (218-362)||(48293588-48293732)
chr4 (227-362)||(44892555-44892690)
chr4 (241-384)||(12503453-12503597)
chr4 (227-360)||(48708298-48708431)
chr4 (227-341)||(35363028-35363143)
chr4 (227-362)||(44890520-44890655)
chr4 (222-350)||(10258306-10258434)
chr4 (227-362)||(48294949-48295085)
chr4 (227-360)||(16691481-16691613)
chr4 (222-294)||(16318251-16318323)
chr4 (282-362)||(43242328-43242408)
chr4 (334-400)||(18751971-18752037)
chr4 (227-335)||(55189531-55189639)
chr4 (285-362)||(44220784-44220861)
chr4 (227-365)||(55191178-55191318)
chr4 (222-400)||(17503972-17504149)
chr4 (230-351)||(30597939-30598059)
chr4 (214-255)||(229151-229192)
chr4 (364-400)||(17504329-17504365)
chr4 (227-343)||(24336190-24336306)
chr4 (364-400)||(35193447-35193483)
[»] scaffold0007 (3 HSPs)
scaffold0007 (222-400)||(64300-64478)
scaffold0007 (214-339)||(64735-64860)
scaffold0007 (227-400)||(205738-205910)
[»] chr8 (30 HSPs)
chr8 (222-400)||(33328156-33328334)
chr8 (227-400)||(19176659-19176832)
chr8 (227-400)||(44831614-44831787)
chr8 (227-383)||(41681137-41681292)
chr8 (227-400)||(12571866-12572040)
chr8 (220-400)||(9930026-9930206)
chr8 (227-398)||(11656458-11656630)
chr8 (228-400)||(13224645-13224816)
chr8 (227-385)||(31133223-31133381)
chr8 (217-384)||(13225023-13225191)
chr8 (227-400)||(9178005-9178177)
chr8 (227-384)||(19176293-19176451)
chr8 (224-384)||(12572235-12572396)
chr8 (227-383)||(31133605-31133762)
chr8 (222-384)||(44831245-44831408)
chr8 (227-384)||(9928912-9929070)
chr8 (220-384)||(11656841-11657006)
chr8 (227-384)||(33328524-33328682)
chr8 (227-384)||(33742925-33743082)
chr8 (227-341)||(41681562-41681676)
chr8 (227-350)||(34540967-34541090)
chr8 (225-400)||(4630161-4630330)
chr8 (277-398)||(33743290-33743411)
chr8 (227-333)||(11336958-11337064)
chr8 (227-378)||(4629800-4629952)
chr8 (213-362)||(10918115-10918264)
chr8 (222-362)||(8073959-8074098)
chr8 (303-362)||(43958264-43958323)
chr8 (227-257)||(9177670-9177700)
chr8 (221-274)||(28877385-28877438)
[»] scaffold0019 (1 HSPs)
scaffold0019 (227-400)||(134042-134215)
[»] scaffold0951 (2 HSPs)
scaffold0951 (227-398)||(1670-1841)
scaffold0951 (227-384)||(2051-2209)
[»] scaffold0432 (2 HSPs)
scaffold0432 (227-400)||(10242-10414)
scaffold0432 (221-331)||(9929-10039)
[»] scaffold1223 (2 HSPs)
scaffold1223 (227-385)||(756-913)
scaffold1223 (227-350)||(1160-1283)
[»] scaffold0417 (2 HSPs)
scaffold0417 (243-400)||(10640-10797)
scaffold0417 (227-350)||(11042-11165)
[»] scaffold0027 (2 HSPs)
scaffold0027 (227-400)||(42528-42700)
scaffold0027 (222-385)||(42167-42331)
[»] scaffold0176 (2 HSPs)
scaffold0176 (220-385)||(18831-18995)
scaffold0176 (227-321)||(19069-19163)
[»] scaffold0113 (1 HSPs)
scaffold0113 (228-350)||(28662-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (227-362)||(570-705)
[»] scaffold0157 (2 HSPs)
scaffold0157 (292-400)||(16564-16672)
scaffold0157 (241-384)||(16880-17024)
[»] scaffold0057 (2 HSPs)
scaffold0057 (220-362)||(61865-62007)
scaffold0057 (227-365)||(61031-61169)
[»] scaffold0076 (1 HSPs)
scaffold0076 (224-327)||(8451-8554)
[»] scaffold1696 (1 HSPs)
scaffold1696 (228-362)||(454-586)
[»] scaffold0168 (1 HSPs)
scaffold0168 (279-362)||(7695-7778)


Alignment Details
Target: chr2 (Bit Score: 161; Significance: 1e-85; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 41249651 - 41249839
Alignment:
Q  19 atcaaaggccctcaaatccttaaatcccatacctaattttt-tgtgtacaataagcgtatcccatgacaaccagtgaattcctctacgagcagtccctcc 117  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41249651 atcaaaggccgtcaaatccttaaatcccatacctaacttttgtgtgtacaataagcgtatcccaagacaaccagtgaattcctctacgagcagtccctcc 41249750  T
Q  118 atgatcccacgaaaatgaataaatcatcttctcaatatcatcattaagtgtgataggaagtaggaaaatgctcataacataaggcgaga 206  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41249751 atcatcccacgaaaatgaataaatcatcttctcaatatcatcattaagtgtgataggaagtaggataatgctcataacataaggcgaga 41249839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 222 - 400
Target Start/End: Original strand, 40027138 - 40027316
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40027138 aaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 40027237  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  40027238 gttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 223 - 398
Target Start/End: Original strand, 11090520 - 11090695
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11090520 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 11090619  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  11090620 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 223 - 400
Target Start/End: Complemental strand, 40815891 - 40815714
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  40815891 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttg 40815792  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||    
T  40815791 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 22374323 - 22374481
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374323 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374422  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  22374423 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttaga 22374481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 239356 - 239528
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  239356 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 239454  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  239455 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 1978111 - 1978284
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1978111 ttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1978210  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||||    
T  1978211 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 224 - 397
Target Start/End: Original strand, 14432142 - 14432315
Alignment:
Q  224 ggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 323  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||    
T  14432142 ggtttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgt 14432241  T
Q  324 tgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctat 397  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  14432242 tgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 18451373 - 18451200
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  18451373 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgttgc 18451274  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  18451273 atttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 222 - 385
Target Start/End: Original strand, 26538095 - 26538258
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||    
T  26538095 aaggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcattttt 26538194  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  26538195 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttaga 26538258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 43058336 - 43058509
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| |||||||||||||||  |||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43058336 ttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43058435  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| || |||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||||    
T  43058436 atttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 227 - 398
Target Start/End: Original strand, 28616616 - 28616788
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28616616 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 28616715  T
Q  327 attttttgtcctaccccccattttattctcc-aaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    | |||| |||||||||||||||||||| ||| ||||| ||||||||||  |||||||||| || |||||||||    
T  28616716 aattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 223 - 400
Target Start/End: Original strand, 3025465 - 3025641
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||    
T  3025465 aggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttg 3025564  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||| |||||||||||||||||| || |||||||||||    
T  3025565 ttgcatttttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 212 - 385
Target Start/End: Complemental strand, 26538636 - 26538462
Alignment:
Q  212 tcattaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaat 311  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  26538636 tcattaattttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaat 26538537  T
Q  312 tatcatttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||||||||||||||||| ||||||||||||||||| |  | ||| ||| ||||||||||||||||||||||    
T  26538536 tatcatttttgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttaga 26538462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 226 - 385
Target Start/End: Complemental strand, 8425903 - 8425744
Alignment:
Q  226 tttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 325  Q
    |||||||||||||||||| || |||||||||  ||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  8425903 tttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttg 8425804  T
Q  326 cattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  8425803 catttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttaga 8425744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 22374867 - 22374709
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22374867 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22374768  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  22374767 atttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 221 - 362
Target Start/End: Original strand, 20444746 - 20444887
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  20444746 aaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 20444845  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||| |||| ||||||||||||||||||| |||||||||    
T  20444846 tgttgcagttttcgtcctaccccccattttatcctccaaaaa 20444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 18450828 - 18450991
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
     |||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  18450928 tttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 35779711 - 35779846
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  35779711 ttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgc 35779810  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||||||||||||||||||| |||||||||    
T  35779811 attttttgtcctaccccccattttatcctccaaaaa 35779846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 214 - 384
Target Start/End: Complemental strand, 40027695 - 40027524
Alignment:
Q  214 attaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatta 313  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  40027695 attaaataaaggtttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaatta 40027596  T
Q  314 tcatttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||||||||||| |||||||| || ||||| |  ||||| ||| |||| |||||| |||||||||    
T  40027595 tcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 7446888 - 7446730
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||| ||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446888 ttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 7446789  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||||||| |||||||||||||||||||||    
T  7446788 atttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 40815348 - 40815506
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40815348 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttttgttgc 40815447  T
Q  327 attttttgtcctacccccca-ttttattctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || | |||||  ||||| ||| |||||||||||||||||||||    
T  40815448 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 35781205 - 35781070
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35781205 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgttgc 35781106  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||||| |||||||||||| |||||||||    
T  35781105 atttttcgtcctaacccccattttatcctccaaaaa 35781070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 222 - 380
Target Start/End: Original strand, 7446340 - 7446497
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||| ||||||||||||||  |||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  7446340 aaggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 7446439  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagtt 380  Q
     |||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||    
T  7446440 attgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 11091062 - 11090904
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  11091062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgttgt 11090963  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||| | || ||||| |  ||||| ||| ||||| |||||||| ||||||    
T  11090962 atttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 1978651 - 1978528
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1978651 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgttgc 1978552  T
Q  327 attttttgtcctaccccccatttt 350  Q
    ||||||||||||||| || |||||    
T  1978551 attttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 8972240 - 8972375
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||    
T  8972240 ttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttgc 8972339  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| || |||||||| ||||||| |||||||||    
T  8972340 atttttcgttctaccccctattttatcctccaaaaa 8972375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 20440573 - 20440439
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  20440573 ttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgttgc 20440474  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    | |||| |||||| |||||| ||||| |||||||||    
T  20440473 agttttcgtcctatccccca-tttatcctccaaaaa 20440439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 222 - 384
Target Start/End: Complemental strand, 28617161 - 28616998
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||    
T  28617161 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcattttt 28617062  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| ||| |||| || ||||| |  ||||| ||| ||||||||||  |||||||||    
T  28617061 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 231 - 384
Target Start/End: Complemental strand, 239890 - 239736
Alignment:
Q  231 ttacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 330  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  239890 ttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgcgttt 239791  T
Q  331 tttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    || ||| |||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  239790 ttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 226 - 383
Target Start/End: Original strand, 8425357 - 8425514
Alignment:
Q  226 tttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 325  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||||| |||||    
T  8425357 tttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttg 8425455  T
Q  326 cattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    ||||||| |||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  8425456 catttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 43058874 - 43058717
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  43058874 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttgttgc 43058776  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  43058775 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 383
Target Start/End: Complemental strand, 3026003 - 3025848
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  3026003 ttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgttgc 3025906  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||| |||||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  3025905 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 15551502 - 15551637
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||||| |||||||  |||||||| ||||||||||||||||    
T  15551502 ttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttgc 15551601  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||| |||| ||||||||| |||||||||    
T  15551602 atttttcgtccaaccctccattttatcctccaaaaa 15551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 28847237 - 28847123
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  28847237 ttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 28847138  T
Q  327 attttttgtcctacc 341  Q
    |||||| ||||||||    
T  28847137 atttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 14432683 - 14432525
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||| ||| |||||||||| |||||||||||    
T  14432683 ttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttgc 14432584  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||  ||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  14432583 atttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 15552595 - 15552473
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |  ||||||||| ||||||||||| || ||  ||||||||||||||||||||||  ||| ||||||||||||||||||||     
T  15552595 ttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttgt 15552497  T
Q  327 attttttgtcctaccccccatttt 350  Q
    |||||| ||||||||| |||||||    
T  15552496 atttttcgtcctaccctccatttt 15552473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 28143572 - 28143400
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||| |||||||||||||||  ||||| |   ||||||||| ||||| ||||  ||| |||  ||||||||  |||| | || |||||| ||| ||||    
T  28143572 ttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt-ttgc 28143474  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    | |||| |||||||  || |||||   ||||| ||| |||||||||||||||||||||| || |||||||||||    
T  28143473 agttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 3824256 - 3824116
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||||||||||| |||||||||| |||  ||||  |  |||||||||| ||||||||||||||| |||  ||||||||| || | |    |||||| |||    
T  3824256 aaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttt 3824157  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
     ||||| |||| || ||| |||||||||||| |||||||||    
T  3824156 tttgcaattttagttctaacccccattttatcctccaaaaa 3824116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 382
Target Start/End: Complemental strand, 31797326 - 31797166
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| |||||||||||||||||||||   ||||| |   ||||||||| ||||||||||  ||| |||  ||||||||| |||| | || ||| || ||    
T  31797326 aaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtt 31797228  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagtttt 382  Q
    | ||||| |||| |||||||| || |||||   ||| | ||| |||||||||||||||||||    
T  31797227 ttttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 1e-81; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 223 - 400
Target Start/End: Original strand, 19830419 - 19830596
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19830419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 19830518  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  19830519 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 220 - 400
Target Start/End: Original strand, 37786763 - 37786943
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  37786763 taaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcattt 37786862  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  37786863 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 217 - 400
Target Start/End: Original strand, 4641433 - 4641616
Alignment:
Q  217 aattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca 316  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||||| |||||||||||| |||||||||||    
T  4641433 aattcaaggtttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatca 4641532  T
Q  317 tttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  4641533 tttttgttgcatttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 19590528 - 19590701
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19590528 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590627  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||||||    
T  19590628 atttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 220 - 400
Target Start/End: Original strand, 38858639 - 38858819
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  38858639 taaaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcattt 38858738  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||    
T  38858739 ttgttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 221 - 400
Target Start/End: Complemental strand, 29100399 - 29100220
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  29100399 aaaggtttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29100300  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  29100299 tgttgcattttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 32005156 - 32004985
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  32005156 ttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgttgc 32005057  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  32005056 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 2659382 - 2659211
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| |||||||||||| |||||||| || ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2659382 ttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2659283  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  2659282 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 34534333 - 34534162
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34534333 ttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgttgc 34534234  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| || || ||||||    
T  34534233 atttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 35289443 - 35289272
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35289443 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggttgc 35289344  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||||||| | ||||||||| || |||||||||    
T  35289343 atttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 230 - 385
Target Start/End: Complemental strand, 23953268 - 23953113
Alignment:
Q  230 attacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 329  Q
    |||||| |||||||||||||||||||   |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  330 ttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttaga 23953113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 19591067 - 19590909
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591067 ttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19590968  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  19590967 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 223 - 385
Target Start/End: Complemental strand, 4478246 - 4478084
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| || |  |||||||||||||||||||||    
T  4478246 aggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttg 4478147  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||||||| ||| || ||| |||||||||||||||||| |||||||||| |||||||||||    
T  4478146 ttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttaga 4478084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 38859183 - 38859025
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38859183 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgttgc 38859084  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||| ||||||||    
T  38859083 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 217 - 383
Target Start/End: Original strand, 32004607 - 32004774
Alignment:
Q  217 aattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca 316  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||||| ||||||||||||||||    
T  32004607 aattataggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatca 32004706  T
Q  317 tttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||||||||||||| | |||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  32004707 tttttgttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 2658842 - 2659000
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  2658842 ttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 2658941  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| ||| |||| || ||||| |  ||||||||| ||||||||||| |||||||||    
T  2658942 atttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 34533794 - 34533952
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||    
T  34533794 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgttgc 34533893  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||  |||||||| || ||||| |  ||||||||| |||||||||||||| ||||||    
T  34533894 attttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 227 - 382
Target Start/End: Complemental strand, 37787309 - 37787153
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  37787309 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgttgc 37787210  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttt 382  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||    
T  37787209 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 220 - 384
Target Start/End: Complemental strand, 19830968 - 19830804
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||| ||||||||||| |||||||||||||||    
T  19830968 taaaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcattt 19830869  T
Q  320 ttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||| |||||||||||| || ||||| |  ||||| |||  ||||||||||||||||||||    
T  19830868 ttgttgcat-ttttgtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 28583442 - 28583581
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||| || | ||||  ||||||||||||||| || ||||| |||||||||||||||||||| ||||    
T  28583442 ttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttattgc 28583541  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgca 366  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  28583542 atttttcgtcctaccccccattttatcctccaaaaatgca 28583581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 237 - 350
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  237 ttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtc 336  Q
    ||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  337 ctaccccccatttt 350  Q
    ||||| || |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 227 - 340
Target Start/End: Original strand, 35288906 - 35289019
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35288906 ttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 35289005  T
Q  327 attttttgtcctac 340  Q
    |||||| |||||||    
T  35289006 atttttcgtcctac 35289019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 341
Target Start/End: Original strand, 23952733 - 23952848
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggca-tactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 325  Q
    ||||||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23952733 ttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttggttg 23952832  T
Q  326 cattttttgtcctacc 341  Q
    ||||||| ||||||||    
T  23952833 catttttcgtcctacc 23952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 28584464 - 28584329
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| ||||||||| |||||| || |||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||     
T  28584464 ttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgttgt 28584365  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| ||| ||||||||||||||| |||||||||    
T  28584364 atttttcgtcttaccccccattttatcctccaaaaa 28584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 38160954 - 38161089
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||| |||||||| ||||||||||| |  || |||||||||||||||||||||||  ||||||||||||| |||||||||||    
T  38160954 ttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgttgc 38161053  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| ||||||| ||||||||||| |||||||||    
T  38161054 atttttcgtcctactccccattttatcctccaaaaa 38161089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||   ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    || ||| |||||||  || ||||| |  ||| | ||| |||||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 787333 - 787281
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtc 275  Q
    ||||||||||||||||||||| ||||| ||||| |  |||||||||| |||||    
T  787333 aggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtc 787281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 6e-81; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 212 - 400
Target Start/End: Original strand, 41046688 - 41046876
Alignment:
Q  212 tcattaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaat 311  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41046688 tcatttattaatggtttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaat 41046787  T
Q  312 tatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  41046788 tatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 223 - 400
Target Start/End: Original strand, 5136979 - 5137156
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5136979 aggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 5137078  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  5137079 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 39556119 - 39555946
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  39556119 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgttgc 39556020  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  39556019 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 31779194 - 31779021
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31779194 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31779095  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||||| ||||||||||  | |||||||||||    
T  31779094 atttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 227 - 398
Target Start/End: Original strand, 20840563 - 20840734
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  20840563 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 20840662  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||| || |||||||||    
T  20840663 atttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 221 - 400
Target Start/End: Original strand, 37726926 - 37727105
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||||||||||||||||||||||||||  | || |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||    
T  37726926 aaaggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttt 37727025  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  37727026 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 24301098 - 24300925
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||||||||||||||| | |||||||||||||||    
T  24301098 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgttgc 24300999  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  24300998 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 228 - 400
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  228 taattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 327  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  328 ttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| | | |||||||||| |||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 221 - 400
Target Start/End: Original strand, 23644459 - 23644638
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  23644459 aaaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttt 23644558  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||||||||||    
T  23644559 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 26837897 - 26837725
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||| |||| |||||||||||||| ||||| |||||||||||||||    
T  26837897 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgttgc 26837799  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  26837798 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 230 - 379
Target Start/End: Original strand, 48452995 - 48453144
Alignment:
Q  230 attacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 329  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48452995 attacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 48453094  T
Q  330 ttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagt 379  Q
    ||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  48453095 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 222 - 400
Target Start/End: Complemental strand, 17465039 - 17464860
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||| ||||||||||||||||||||| ||| || ||||||||||   ||||||||||| |||||||||||||||||||||||||||||||    
T  17465039 aaggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcattttt 17464940  T
Q  322 gttgcatt-ttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  17464939 gttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 43973444 - 43973602
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973444 ttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 43973543  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  43973544 atttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttaga 43973602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 25853769 - 25853596
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| |||||||||||||   ||||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||    
T  25853769 ttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttgc 25853670  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  25853669 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 32535505 - 32535330
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatc-----attttt 321  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     ||||||    
T  32535505 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaattttt 32535406  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||  ||||||||    
T  32535405 gttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 222 - 400
Target Start/End: Complemental strand, 27394124 - 27393946
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||  |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  27394124 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcattttt 27394025  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||   |||||||||| ||||||||||||||||| |||||||||| ||||||||||| || |||| ||||||    
T  27394024 gttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 30104485 - 30104657
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||| || | |||||||||||||||||||||||||||||    
T  30104485 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgttgc 30104584  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||| ||||||||||||| || ||||| |||||||||||||||||||||| || |||||||||||    
T  30104585 atttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 223 - 400
Target Start/End: Complemental strand, 26275112 - 26274936
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||| | |||||| ||| |||||||| | ||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||    
T  26275112 aggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttg 26275013  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||| || |||||||||||    
T  26275012 ttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 4275906 - 4275748
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  4275906 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4275807  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  4275806 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 37727472 - 37727314
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37727472 ttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 37727373  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  37727372 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 43973982 - 43973824
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43973982 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 43973883  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| || | ||| ||| |||||||||||||||||||||    
T  43973882 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 221 - 350
Target Start/End: Original strand, 32534956 - 32535085
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32534956 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 32535055  T
Q  321 tgttgcattttttgtcctaccccccatttt 350  Q
    |||||||||||| |||||||| || |||||    
T  32535056 tgttgcatttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 220 - 384
Target Start/End: Original strand, 39555574 - 39555739
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  39555574 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcattt 39555673  T
Q  320 ttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||||| || ||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  39555674 ttgttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 221 - 384
Target Start/End: Complemental strand, 20841109 - 20840945
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20841109 aaaggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 20841010  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  20841009 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 27393659 - 27393822
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||| | ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  27393659 aaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcattttt 27393758  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| ||||||||||| ||||| |  | ||| ||| |||||||||||||||||||||    
T  27393759 gttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 222 - 384
Target Start/End: Complemental strand, 30098310 - 30098147
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  30098310 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcattttt 30098211  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| |||||||| || ||||| |  || || ||| ||||||| |||||||||||||    
T  30098210 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 17464494 - 17464652
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17464494 ttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17464593  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| | | |||||||||||||||||    
T  17464594 atttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 25853237 - 25853395
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25853237 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 25853336  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| || ||||| || ||||| |  ||||| ||| |||||||||| ||||||||||    
T  25853337 atttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 31778650 - 31778814
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  31778650 aaaggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttt 31778749  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  31778750 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 224 - 362
Target Start/End: Complemental strand, 25612522 - 25612384
Alignment:
Q  224 ggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 323  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||| |||||||||| ||| || |||||||||||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgt 25612423  T
Q  324 tgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  25612422 tgcatttttcgtcctaccccccattttatcctccaaaaa 25612384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 29801958 - 29801799
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29801958 ttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29801859  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| |||| ||| || ||||| |  ||||| ||| |||||||||||||| |||||||    
T  29801858 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttaga 29801799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 5137523 - 5137365
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  5137523 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgttgc 5137424  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||| | || ||||| |  ||||| ||| |||||||||||||||||||||    
T  5137423 atttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 22424817 - 22424975
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||| |||||||||  || |||| |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  22424817 ttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22424916  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  22424917 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 29801359 - 29801477
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29801359 ttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 29801458  T
Q  327 attttttgtcctacccccc 345  Q
    |||||| ||| ||||||||    
T  29801459 atttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 26837359 - 26837521
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||| |||||||||| || ||||||| ||||||||||| ||||| |||||||||| |||| ||| ||||||||||||||||||||||||||    
T  26837359 aggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttg 26837458  T
Q  323 ttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  26837459 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 26274564 - 26274728
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||||||||||||| ||||| |||| || ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26274564 aaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 26274663  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||||| ||| |||| || ||||| |  ||||| ||| ||||  |||||||||||||||    
T  26274664 tgttgcatttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 23228549 - 23228415
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| ||||||||  |||||||||||||||||||| ||||    
T  23228549 ttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttattgc 23228451  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||||||| |||||||||| |||||||||    
T  23228450 atttttcgtcctacctcccattttatcctccaaaaa 23228415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 50116951 - 50116816
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||    
T  50116951 ttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgttgc 50116852  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    | |||| ||||||||||||||||| | |||||||||    
T  50116851 aattttcgtcctaccccccattttttcctccaaaaa 50116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 23645007 - 23644849
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  23645007 ttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 23644908  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||  ||||||| || ||||| |  ||| |  || |||||||||||||||||||||    
T  23644907 atttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 24300554 - 24300717
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||||||||||||| |||||||| |||||||||||| || |||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||||    
T  24300554 aaaggtttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttt 24300652  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||| |||| |||| ||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  24300653 tgttgcaattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 51474876 - 51474740
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| |||||||  |||||| | ||||||||||||||||    
T  51474876 ttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgttgc 51474777  T
Q  327 attttttgtcctacccccca-ttttattctccaaaaa 362  Q
    |||||| ||||||||||| | |||||| |||||||||    
T  51474776 atttttcgtcctacccccaatttttatcctccaaaaa 51474740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 32697242 - 32697108
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| | |||||||||||||||||| || ||||||||||| | |||| ||||||||||||||||||||||  || ||||||||||||||||||||||    
T  32697242 ttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgttgc 32697143  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| ||||||| ||||||||||| |||||||||    
T  32697142 atttttcgtcctac-ccccattttatcctccaaaaa 32697108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 220 - 384
Target Start/End: Complemental strand, 41047246 - 41047083
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||||||||||||||||| | || || ||||||||| ||||||||||||||||  || ||||||||||||||| |||||| |||||||||||||||||    
T  41047246 taaaggtttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcattt 41047149  T
Q  320 ttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  41047148 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 227 - 368
Target Start/End: Complemental strand, 25420683 - 25420542
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| || |||| ||||| | ||||||||||| || ||| |||||||||||| |||| ||||  ||||||||||||| |||||||||||    
T  25420683 ttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttgc 25420584  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcaga 368  Q
    |||||| ||| ||||||||||||||| || ||||||||||||    
T  25420583 atttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 218 - 362
Target Start/End: Original strand, 37220551 - 37220695
Alignment:
Q  218 attaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 317  Q
    |||| ||| ||||||||||||||||||||||| ||||||| ||||||| | |  | |||||| |||||||||||||| ||||  |||||||| |||||||    
T  37220551 attataggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcat 37220650  T
Q  318 ttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||| |||| ||||||||| ||||||||| |||||||||    
T  37220651 ttttgttgcacttttcgtcctaccctccattttatcctccaaaaa 37220695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 45965941 - 45966076
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||  |  || ||| ||||||||||| |||||||  ||||||| |||||||||| ||||||    
T  45965941 ttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgttgc 45966040  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| || ||| |||||||||| | |||||||||    
T  45966041 atttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 338
Target Start/End: Original strand, 51473431 - 51473542
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||  || |||||||| ||||| |||||||||||||||||||||||  |||||||  ||||||||||||||||    
T  51473431 ttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgttgc 51473530  T
Q  327 attttttgtcct 338  Q
    | |||| |||||    
T  51473531 acttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 25419150 - 25419273
Alignment:
Q  230 attacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtcc-ttcaattatca-tttttgttgca 327  Q
    |||| |||||||||| ||||||||| || ||||||||||| | ||  |||||||||||||||||||||||| |||| ||||||||||| ||||| |||||    
T  25419150 attatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatttttttttgca 25419249  T
Q  328 ttttttgtcctaccccccatttta 351  Q
     |||| |||||  |||||||||||    
T  25419250 gttttagtccttacccccatttta 25419273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 37222113 - 37222030
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaa 310  Q
    ||||||||||||||||||||||||||||| | ||||||| ||| ||||| |||| |||||||||||||||||||  ||||||||    
T  37222113 ttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 18010255 - 18010162
Alignment:
Q  259 tactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttat 352  Q
    ||||||||||| ||||   ||||||||||||||||||||||  ||  ||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  18010255 tactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 351
Target Start/End: Original strand, 32695704 - 32695830
Alignment:
Q  225 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 324  Q
    ||||||||||| ||||||||||| | ||||||| |||| |||||| || | ||| | ||||||||||||||||||  ||||| | ||||| |||||||||    
T  32695704 gtttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgtt 32695803  T
Q  325 gcattttttgtcctaccccccatttta 351  Q
    ||| |||| |||||  ||| |||||||    
T  32695804 gcaattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 29801532 - 29801577
Alignment:
Q  340 ccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttaga 29801577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 362
Target Start/End: Original strand, 23227319 - 23227394
Alignment:
Q  287 aaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||||||||   ||||| ||||| ||||||||||||||||||| ||||| | ||||||||||| |||||||||    
T  23227319 aaacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtccttctccccattttatcctccaaaaa 23227394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 401
Target Start/End: Original strand, 49407799 - 49407972
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||  ||||| |   ||||||||| ||||||||||  ||| ||| |||||||||| |||| | || | |   ||||||  |    
T  49407799 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttgta-c 49407897  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgcta 401  Q
    | |||| ||| |||| || |||||   ||||||||| |||||||||||||| ||||||| || ||||||||||||    
T  49407898 agttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  329 tttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||| |||||||| || |||||   ||||| ||| |||||||||||||||||||||| || |||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 400
Target Start/End: Complemental strand, 50900975 - 50900898
Alignment:
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||| ||||||||||||| || |||||   ||||| ||| ||| ||||||  ||||||||||||| |||||||||||    
T  50900975 ttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 4796 - 4969
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4796 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4895  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  4896 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 5333 - 5222
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  5333 ttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttgc 5234  T
Q  327 attttttgtcct 338  Q
    |||||| |||||    
T  5233 atttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 10900472 - 10900299
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10900472 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900373  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  10900372 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 18257140 - 18257313
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257140 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18257239  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||    
T  18257240 atttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 222 - 400
Target Start/End: Complemental strand, 15828188 - 15828010
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  15828188 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcattttt 15828089  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  15828088 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 11277124 - 11276951
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11277124 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgttgc 11277025  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||||    
T  11277024 atttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 20741103 - 20741276
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20741103 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgttgc 20741202  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  20741203 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 2319675 - 2319832
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2319675 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2319774  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  2319775 atttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 31470858 - 31470685
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31470858 ttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 31470759  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||    
T  31470758 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 1149974 - 1149802
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1149974 ttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgttgc 1149875  T
Q  327 attttttgtcctaccccccattttattctcca-aaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||| || |||||||||    
T  1149874 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 12935699 - 12935528
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |    
T  12935699 ttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgttac 12935600  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||| || |||||||||    
T  12935599 atttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 218 - 384
Target Start/End: Complemental strand, 23075679 - 23075512
Alignment:
Q  218 attaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 317  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23075679 attataggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 23075580  T
Q  318 ttttgttgcattttttgtcctacccccca-ttttattctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||||||| || ||||| || | |||||  |||||||||||||||||||||||||||||||    
T  23075579 ttttgttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 11444990 - 11445163
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  11444990 ttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgttgc 11445089  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||| ||||||||||||| |||||  ||||||||||||||||||||| || |||||||||||    
T  11445090 atttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 28472640 - 28472812
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  28472640 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 28472739  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  28472740 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 29859829 - 29860001
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||| |||| |||||||||||||||||| |||| |||||||||||||||||||||    
T  29859829 ttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgttgc 29859928  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  29859929 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 225 - 400
Target Start/End: Complemental strand, 2322762 - 2322588
Alignment:
Q  225 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 324  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  2322762 gtttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgtt 2322663  T
Q  325 gcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||| |||||||||| ||||||||||||| ||||  ||||||||||||||||||||| || |||||||||||    
T  2322662 gcatttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 18505461 - 18505288
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  18505461 ttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgttgc 18505362  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||||||||||||||||||||||| || | |||||||||||||||||| ||||  ||||||||||    
T  18505361 atttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 12935160 - 12935318
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935160 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12935259  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  12935260 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 226 - 385
Target Start/End: Original strand, 10899941 - 10900101
Alignment:
Q  226 tttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 325  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10899941 tttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 10900040  T
Q  326 cattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||||    
T  10900041 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaga 10900101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 11445529 - 11445371
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11445529 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11445430  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  11445429 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 22219895 - 22219737
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219895 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 22219796  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| || ||||| || ||||| |  ||||| |||  ||||||||||||||||||||    
T  22219795 atttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 4811375 - 4811533
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||  || ||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |    
T  4811375 ttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgtttc 4811474  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||| |||||||||||||||||| |||||| ||||| |||| |||||||||||    
T  4811475 atttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttaga 4811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 225 - 384
Target Start/End: Original strand, 18504920 - 18505080
Alignment:
Q  225 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 324  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||    
T  18504920 gtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtt 18505019  T
Q  325 gcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
     ||||||| |||||||| || ||||| |  ||| | ||||| |||||||||||||||||||    
T  18505020 tcatttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 222 - 385
Target Start/End: Original strand, 23073997 - 23074149
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||           
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat------- 23074089  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
        ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  23074090 ----catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 23074149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 31470313 - 31470476
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||    
T  31470313 aaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattattttt 31470412  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  31470413 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 220 - 384
Target Start/End: Complemental strand, 20741653 - 20741485
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat-- 317  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||      
T  20741653 taaaggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 20741554  T
Q  318 -ttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
     |||| |||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||||| ||||||    
T  20741553 ttttttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 18257679 - 18257565
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  18257679 ttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttac 18257580  T
Q  327 attttttgtcctacc 341  Q
    |||||| ||||||||    
T  18257579 atttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 222 - 360
Target Start/End: Complemental strand, 3835273 - 3835135
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    ||||||||||||||||||||||||  |||||||| | ||||||||||| ||||| ||||  |||||||||||||||||  |||||| |||||||||||||    
T  3835273 aaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcattttt 3835174  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaa 360  Q
    || |||||||| ||||||||||||||||||| |||||||    
T  3835173 gtggcatttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 11276587 - 11276751
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| |||||||||| ||| |||| ||||||||||  |||||| ||||||| || | ||||||||||||||||||||| |||||||||||| |||||||    
T  11276587 aaaggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttt 11276686  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||| ||||||| |||||||| || ||||| |  ||||||||| |||||||||||||||||||||    
T  11276687 tgtttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 11276751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 29033437 - 29033573
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||| ||||||| | ||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  29033437 ttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttgc 29033536  T
Q  327 attttttgtcctaccccccattttatt-ctccaaaaa 362  Q
    |  |||  |||||||||||||||| || |||||||||    
T  29033537 acatttcatcctaccccccatttttttcctccaaaaa 29033573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 29035179 - 29035044
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| ||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||  |||||| | ||||||||||||||||    
T  29035179 ttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttgc 29035080  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||| |||| ||||||| | |||||||||    
T  29035079 atttttcgtcccaccctccattttttcctccaaaaa 29035044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 227 - 350
Target Start/End: Original strand, 15827641 - 15827766
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaa--acggtccttcaattatcatttttgtt 324  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  || |||||||||||| ||||||  |||||||||||| |||||||||||||    
T  15827641 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttgtt 15827740  T
Q  325 gcattttttgtcctaccccccatttt 350  Q
    |||||||| |||||||| || |||||    
T  15827741 gcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 227 - 332
Target Start/End: Complemental strand, 4811798 - 4811693
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||| ||||||||||||||| |||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  4811798 ttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4811699  T
Q  327 attttt 332  Q
    ||||||    
T  4811698 attttt 4811693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 18296148 - 18296282
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| | |||| |||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  18296148 ttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgttgc 18296247  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||||| |||||||||||| |||||||||    
T  18296248 atttttcgtccta-cccccattttatcctccaaaaa 18296282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 1149468 - 1149553
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatt 312  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  1149468 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 35163639 - 35163557
Alignment:
Q  317 tttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgc 399  Q
    ||||| ||||| |||| |||||||| || |||||   |||||||||  ||||||||||||||||||||  || ||||||||||    
T  35163639 ttttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 22534267 - 22534214
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcc 280  Q
    ||||||||||||||||||||||| ||||| |  |||||||||| ||||| ||||    
T  22534267 ttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 220 - 400
Target Start/End: Complemental strand, 50970827 - 50970647
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  50970827 taaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 50970728  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  50970727 ttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 222 - 400
Target Start/End: Original strand, 29869618 - 29869796
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  29869618 aaggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattattttt 29869717  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  29869718 gttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 222 - 400
Target Start/End: Complemental strand, 5963125 - 5962947
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  5963125 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcattttt 5963026  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  5963025 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 29306956 - 29307114
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29306956 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307055  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29307056 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 29307114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 223 - 400
Target Start/End: Original strand, 15173095 - 15173272
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||  |||||||||||| ||||||||||||||||||    
T  15173095 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttg 15173194  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  15173195 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 18984122 - 18984295
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18984122 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18984221  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||  ||||||||||    
T  18984222 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 221 - 385
Target Start/End: Complemental strand, 5540366 - 5540202
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  5540366 aaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttt 5540267  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5540266 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 5540202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 33144461 - 33144288
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  33144461 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttgc 33144362  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||    
T  33144361 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 222 - 385
Target Start/End: Complemental strand, 15646742 - 15646579
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  15646742 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 15646643  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  15646642 gttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttaga 15646579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 8679083 - 8678911
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  8679083 ttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgttgc 8678984  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  8678983 atttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 39154022 - 39154180
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39154022 ttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttgc 39154121  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  39154122 atttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttaga 39154180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 9018976 - 9019149
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  9018976 ttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgttgc 9019075  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| | | |||||||||| |||||||||||    
T  9019076 atttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 17433219 - 17433392
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17433219 ttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 17433318  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  17433319 atttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 21856585 - 21856412
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| || |||| ||||||||||||||||||||||||||||| ||||||||||| |||    
T  21856585 ttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgctgc 21856486  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  21856485 atttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 17433757 - 17433598
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17433757 ttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 17433658  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| |||||||| || ||||| |  || || ||| ||||||||||||||||||||||    
T  17433657 atttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttaga 17433598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 227 - 398
Target Start/End: Complemental strand, 26859601 - 26859431
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||  || ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26859601 ttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgttgc 26859502  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||| | ||||||||| || || ||||||    
T  26859501 atttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 29307484 - 29307325
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29307484 ttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29307385  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||||    
T  29307384 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaga 29307325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 15646195 - 15646353
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15646195 ttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgttgc 15646294  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| |  ||||| |  ||||| |||||||||||||||||||||||||    
T  15646295 atttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 227 - 382
Target Start/End: Original strand, 50970281 - 50970437
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  50970281 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgttgc 50970380  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttt 382  Q
    |||||| ||||||||  | ||||| |  ||||| ||| |||||||||||||||||||    
T  50970381 atttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 5539819 - 5539977
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  5539819 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 5539918  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||| ||||||| |||||||||    
T  5539919 atttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 341
Target Start/End: Original strand, 8678544 - 8678658
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8678544 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgc 8678643  T
Q  327 attttttgtcctacc 341  Q
    |||||| ||||||||    
T  8678644 atttttcgtcctacc 8678658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 21856045 - 21856203
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856045 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 21856144  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||  ||||| | || ||||| |  ||||| ||| |||||||||||||||||||||    
T  21856145 atttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 29870161 - 29870003
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29870161 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 29870062  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||  | ||| |||||||||||||||||||||    
T  29870061 atttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 227 - 383
Target Start/End: Complemental strand, 4636513 - 4636356
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4636513 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 4636414  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||| |||| ||| || ||||| |  ||||| ||| |||||||||||||| |||||    
T  4636413 atttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 232 - 384
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  232 tacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttt 331  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  332 ttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    | |||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 18984666 - 18984538
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18984666 aaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984567  T
Q  322 gttgcattttttgtcctaccccccatttt 350  Q
    ||||||||||| |||||||| || |||||    
T  18984566 gttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 222 - 384
Target Start/End: Complemental strand, 39154567 - 39154404
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||    
T  39154567 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcattttt 39154468  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| |||||||| || ||||| |  || || ||| |||||||||||||| ||||||    
T  39154467 gttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 15173635 - 15173478
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15173635 ttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15173537  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  15173536 atttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 393
Target Start/End: Complemental strand, 9019505 - 9019338
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  9019505 ttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 9019406  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttagatctgcccc 393  Q
    |||||| |||||||| || ||||| |  | ||| ||| |||||||||| ||||||||||| |||||||    
T  9019405 atttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 227 - 341
Target Start/End: Original strand, 26859062 - 26859176
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26859062 ttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26859161  T
Q  327 attttttgtcctacc 341  Q
    |||||| ||||||||    
T  26859162 atttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 52268288 - 52268428
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||| ||||||| | ||||||||| ||||| |||||||||||||||||||||||| ||| |||| |||||||||||    
T  52268288 aaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcattttt 52268387  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||| ||||||||||||||||| | |||||||||    
T  52268388 gttgcacttttcgtcctaccccccattttttcctccaaaaa 52268428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  284 ttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagtttta 383  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  384 gatctgccccctatg 398  Q
    || || |||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 5962581 - 5962739
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| |||||||||||||||| |||  || ||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  5962581 ttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgttgc 5962680  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| || ||||| || ||||| |  ||||| |||  ||||| ||||||||||||||    
T  5962681 atttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 227 - 340
Target Start/End: Complemental strand, 52269290 - 52269177
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | |||||| ||||  |||  |||||||||||||||||||||||  ||| |||| ||||||||||||||||    
T  52269290 ttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttgc 52269191  T
Q  327 attttttgtcctac 340  Q
    | |||| |||||||    
T  52269190 acttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 47827125 - 47827033
Alignment:
Q  232 tacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 324  Q
    |||||||||| ||  | ||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  47827125 tacacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgtt 47827033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 227 - 310
Target Start/End: Complemental strand, 2733499 - 2733416
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaa 310  Q
    ||||||| |||||||||||| |||||||||| || || ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  2733499 ttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 17112285 - 17112442
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||| ||| |||||||   |||||| |||| |||| | |||||||||||| |||| ||||  |||||||||||||||||||| ||||    
T  17112285 ttaattacacttttggttctcatgttttgatctactcatgaaattggt-aggcccttttaaaatagaataaaatagtccttcaattatcatttttattgc 17112383  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||||| |||||| ||||||||    
T  17112384 atttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 47826967 - 47827039
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaa 299  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |||||||    
T  47826967 ttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 44802714 - 44802556
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||| |  ||||| |   ||||||||| ||||||||||  ||| |||| ||||||||  |||| | || |||||| ||| ||||    
T  44802714 ttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttttgc 44802615  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    | |||| || ||||| || |||||   ||||| |||  |||| |||||||| |||||||    
T  44802614 agttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttaga 44802556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 17641918 - 17641862
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcat 277  Q
    |||| |||||||||||||||||||||||  ||||| |  |||||||||| |||||||    
T  17641918 aaagatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcat 17641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 9e-77; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 5819471 - 5819298
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5819471 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 5819372  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  5819371 atttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 2865297 - 2865124
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2865297 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtttc 2865198  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| || |||||||||||    
T  2865197 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 18183511 - 18183338
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183511 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183412  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  18183411 atttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 8647441 - 8647614
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  8647441 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 8647540  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||    
T  8647541 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 19359139 - 19359312
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19359139 ttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 19359238  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| || |||||||||||    
T  19359239 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 8460920 - 8461106
Alignment:
Q  214 attaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatta 313  Q
    ||||| || ||| |||||| ||||||||||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  8460920 attaaatataggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 8461019  T
Q  314 tcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  8461020 tcatttttgttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 15708974 - 15709146
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15708974 ttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 15709073  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    || ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  15709074 atatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 223 - 385
Target Start/End: Complemental strand, 15372419 - 15372257
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  15372419 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 15372320  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||||||||| ||||  ||||||||||| |||||||| ||||||||||||||||||||||    
T  15372319 ttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttaga 15372257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 24362378 - 24362220
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  24362378 ttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgttgc 24362279  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24362278 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaga 24362220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 164733 - 164560
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| | ||||| ||||| |||||||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  164733 ttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 164634  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  164633 attttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 222 - 385
Target Start/End: Complemental strand, 29455289 - 29455126
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| |||||||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  29455289 aaggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 29455190  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  29455189 gttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 29455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 18182969 - 18183131
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18182969 aggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18183068  T
Q  323 ttgcattttttgtcctacccccca-ttttattctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||| |||||||| || | |||||| | ||| ||| |||||||||||||||||||||    
T  18183069 ttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 227 - 396
Target Start/End: Complemental strand, 14215785 - 14215616
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14215785 ttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 14215686  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgcccccta 396  Q
    |||||| ||| || |||||||||||||||||||||| | |||||||||||||||||||| || |||||||    
T  14215685 atttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 5818928 - 5819090
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  5818928 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttg 5819027  T
Q  323 ttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||| ||| |||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  5819028 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  230 attacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 329  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  330 ttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttag 384  Q
    ||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 220 - 400
Target Start/End: Original strand, 16018585 - 16018763
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| |||||||||||||||||| |||||||||||| || |||||||| || |||||||||||||||| |||||||||||||||||||||||| ||||    
T  16018585 taaaggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attt 16018683  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    || |||||||||  |||||| |||||||||||||||||||||||  ||| |||||||||||||||| || |||||||||||    
T  16018684 ttattgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 2864757 - 2864915
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||| |||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2864757 ttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 2864856  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  2864857 atttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 8647980 - 8647822
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8647980 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 8647881  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| ||| ||||  | ||||| |  ||||| ||| |||||||||||||||||||||    
T  8647880 atttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 14215244 - 14215402
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  14215244 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttgc 14215343  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  14215344 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 19359678 - 19359520
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359678 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgg 19359579  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| | ||||||||| |||||||||    
T  19359578 atttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 230 - 384
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  230 attacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 329  Q
    |||||||||||||||| | ||||||||| ||| |||||||||| |||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  330 ttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttag 384  Q
    ||| ||||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 246 - 388
Target Start/End: Original strand, 25000112 - 25000254
Alignment:
Q  246 tcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctacccccc 345  Q
    |||||||||||| ||||||||||  |||||||||||| ||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  346 attttattctccaaaaatgcagagaaatgacagttttagatct 388  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatct 25000254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 24332106 - 24331929
Alignment:
Q  227 ttaattacactttt-ggtcctcgtgttttggcatactcacgaaactggtcatgccctttt-aaaacagaacaaaacggtccttcaattatcattttt-gt 323  Q
    |||||||||||||| |||| || |||||||||||||||||||||||| || |||| |||| ||||||||||||||||||||| |||||||||||||| ||    
T  24332106 ttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttgt 24332007  T
Q  324 tgcatttttt-gtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  24332006 tgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 14464062 - 14463905
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| |||||||||||||||| |||||||||||||  |  || |||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  14464062 ttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttattgc 14463963  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| |||||| |||| ||||||||||||||||| ||||||||||||||||||||||    
T  14463962 atttttcgtccta-ccccaattttattctccaaaaacgcagagaaatgacagttttaga 14463905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 212 - 384
Target Start/End: Original strand, 29454728 - 29454901
Alignment:
Q  212 tcattaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaat 311  Q
    ||||||||| |||| |||||| ||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  29454728 tcattaatttaaggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaat 29454827  T
Q  312 tatcatttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| ||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||| ||||||||    
T  29454828 tatcatttttgctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 222 - 384
Target Start/End: Complemental strand, 8461478 - 8461315
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  8461478 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcattttt 8461379  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    | ||||||||| ||| |||| || ||||| |  ||||| ||| |||||||||||||| ||||||    
T  8461378 gctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 221 - 385
Target Start/End: Complemental strand, 25000637 - 25000472
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||  ||||||||||||||||||| |||| |||||||||||||||    
T  25000637 aaaggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttt 25000538  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||||||||| |||| ||| || ||||| |  ||||||||| ||||||||||||||||||||||    
T  25000537 tgttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttaga 25000472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 223 - 385
Target Start/End: Complemental strand, 16019133 - 16018970
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| ||||||||| |||| |||| ||| ||||||||||||||||||    
T  16019133 aggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttg 16019034  T
Q  323 ttgcattttttgtcctacccccca-ttttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||| |||||| |||||||| || | |||||  ||||| ||| ||||||||||||||||||||||    
T  16019033 ttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttaga 16018970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 227 - 383
Target Start/End: Original strand, 164194 - 164350
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| |||||||||    
T  164194 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-ttttgttgc 164292  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||| |||||    
T  164293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 24331562 - 24331722
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatc--atttttgtt 324  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  24331562 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattttttgtt 24331661  T
Q  325 gcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||  ||||| | || ||||| |  ||||| ||| |||||||||||||||||||||    
T  24331662 gcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 7349559 - 7349424
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||| ||| ||||||||||| ||||||||  ||||||| ||||||||||||||||    
T  7349559 ttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgttgc 7349460  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    | ||||  |||||||||||||||| | |||||||||    
T  7349459 acttttcatcctaccccccattttttcctccaaaaa 7349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 15709510 - 15709353
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| | |||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||| | ||||||||| ||||||    
T  15709510 ttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgttgc 15709412  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||  |||||||||||||||||||||    
T  15709411 atttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 227 - 344
Target Start/End: Complemental strand, 4222264 - 4222147
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||  ||| |||| ||||||||||| ||||    
T  4222264 ttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttattgc 4222165  T
Q  327 attttttgtcctaccccc 344  Q
    |||||| |||||||||||    
T  4222164 atttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 225 - 365
Target Start/End: Complemental strand, 6019314 - 6019174
Alignment:
Q  225 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 324  Q
    |||| |||||| |||||||| || ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || ||||||||||||||||    
T  6019314 gtttgattacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgtt 6019216  T
Q  325 gcatttttt-gtcctaccccccattttattctccaaaaatgc 365  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  6019215 gcattttttcgtcctacctcccattttatcctccaaaaatgc 6019174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 7348562 - 7348701
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||| |||||| |  ||||||||||| ||||| ||||||||||||||||||||||||  ||||||  ||||||||||||||||    
T  7348562 ttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgttgc 7348661  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgca 366  Q
    | |||| ||||||||||||||||| |  ||||||||||||    
T  7348662 acttttcgtcctaccccccattttttcttccaaaaatgca 7348701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 4219666 - 4219804
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||  || | || ||| |||||||||| |||||||||||||||||   |||||| | ||||||||||||||||    
T  4219666 ttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgttgc 4219765  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgca 366  Q
    |||||| |||||| |||||||||||| |||||||||||||    
T  4219766 atttttcgtccta-cccccattttatcctccaaaaatgca 4219804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 227 - 337
Target Start/End: Original strand, 15371874 - 15371983
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||| ||||||  ||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15371874 ttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttgc 15371972  T
Q  327 attttttgtcc 337  Q
    |||||| ||||    
T  15371973 atttttcgtcc 15371983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 4623151 - 4623284
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||| | ||||||||||| ||||| ||||  |||||||||||||||||  |||||||||||||||||||| | ||    
T  4623151 ttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttatggc 4623250  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||  ||||||  ||||||||||| |||||||||    
T  4623251 attttccgtccta--ccccattttatcctccaaaaa 4623284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 6018317 - 6018431
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||| |||||||||||   |||||||||||||||||||| ||||||||||||||||||||   | ||||||||||||||||||||||    
T  6018317 ttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgttgc 6018415  T
Q  327 attttttgtcctaccc 342  Q
    | |||| |||||||||    
T  6018416 agttttagtcctaccc 6018431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 4624757 - 4624632
Alignment:
Q  237 ttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtc 336  Q
    |||| |||||||||||||  | ||||||||||| |||||||| |  ||||||||| ||||||||  || |||||||||||||| |||||||||||| |||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  337 ctaccccccattttattctccaaaaa 362  Q
    |||||||||||||||| || ||||||    
T  4624657 ctaccccccattttatccttcaaaaa 4624632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 13814224 - 13814135
Alignment:
Q  277 tgcccttttaaaacagaacaaaacggtcct-----tcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||||| ||||||||||| ||| |     ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||    
T  13814224 tgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaa 13814135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  306 ttcaattatcatttttgttgcattttttgtcctaccccccatttt 350  Q
    ||||||||||||||||||||||||||| |||||||| || |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 24325639 - 24325595
Alignment:
Q  341 cccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||||||||||||||| || | |||||||||||||||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttaga 24325595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 27307499 - 27307428
Alignment:
Q  329 tttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||| |||||||| || |||||   ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  27307499 ttttagtcctacctcctattttcaactccagaaatgcagagaaatgacatttttagatccaccccctatgct 27307428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 365
Target Start/End: Complemental strand, 20266462 - 20266320
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    |||||||||| |||||||||||||||| ||||| |   || |||||| |||||||| |  ||| |||  ||||||||  |||| | || ||||||  |||    
T  20266462 aggtttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactatcatggttg 20266363  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgc 365  Q
    ||| | |||| ||||||||||| |||||   ||||||||||||    
T  20266362 ttgtagttttagtcctaccccctattttcacctccaaaaatgc 20266320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 4749 - 4576
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4749 ttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 4650  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||||||    
T  4649 atttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 263 - 384
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  263 cacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccatttt-attctccaaaa 361  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  362 atgcagagaaatgacagttttag 384  Q
    |||||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 33109687 - 33109860
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33109687 ttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 33109786  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||| |||||||    
T  33109787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 25937673 - 25937846
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937673 ttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 25937772  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||||    
T  25937773 attttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 46193947 - 46193774
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46193947 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattgc 46193848  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||| || |||||||||||    
T  46193847 atttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 11153689 - 11153516
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  11153689 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgttgc 11153590  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||  | |||||||||||    
T  11153589 atttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 12234332 - 12234505
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12234332 ttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12234431  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| | || |||||||||||    
T  12234432 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 48526199 - 48526371
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||| ||||||||||| | |||||| ||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48526199 ttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 48526298  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48526299 atttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 227 - 394
Target Start/End: Complemental strand, 25447778 - 25447611
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25447778 ttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 25447679  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccc 394  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||| || |||||    
T  25447678 atttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 222 - 400
Target Start/End: Complemental strand, 15523781 - 15523603
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| |||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||||||||| ||||||| |||||||||| ||||||||||    
T  15523781 aaggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcattttt 15523682  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||| || |||||||||||    
T  15523681 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 223 - 400
Target Start/End: Complemental strand, 22434722 - 22434547
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||||    
T  22434722 aggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttg 22434624  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  22434623 ttgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 23494446 - 23494604
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  23494446 ttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattgc 23494545  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  23494546 atttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttaga 23494604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 227 - 385
Target Start/End: Complemental strand, 38962361 - 38962203
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||  || ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38962361 ttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 38962262  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  38962261 atttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttaga 38962203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 4219560 - 4219733
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |||||||| | |||||||| |||||||||||||||||||||||||    
T  4219560 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttgc 4219659  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||  ||||||||||    
T  4219660 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 51020800 - 51020973
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||| |||||||||  | |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51020800 ttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgttgc 51020899  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||||||||||||||||||| |||||| | |||||||||||||||||||| || |||||||||||    
T  51020900 atttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 223 - 400
Target Start/End: Complemental strand, 54995613 - 54995437
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  54995613 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttg 54995515  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||| |||||||| ||||||||| || || ||||||||    
T  54995514 ttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 400
Target Start/End: Complemental strand, 22170484 - 22170306
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||||||||||||||||||||||||| | |||| |||||| || || |||| |||||||||| |||||||||||| |||||||||||||||    
T  22170484 aaaggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttt 22170386  T
Q  321 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  22170385 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 22434182 - 22434340
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  22434182 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgt 22434281  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  22434282 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 45082966 - 45082808
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45082966 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 45082867  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  45082866 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 220 - 400
Target Start/End: Complemental strand, 2118844 - 2118665
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    ||||||||||||||||||||||||| |||||||||||| | |||| |||||||||| |  |||||||||||| |||||||||||| ||||||||||||||    
T  2118844 taaaggtttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcattt 2118745  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | ||||||||| || |||||||||||    
T  2118744 ttgttgcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 12234871 - 12234713
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234871 ttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12234772  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  | ||| |||||||||||||||||||||||||    
T  12234771 atttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 223 - 400
Target Start/End: Original strand, 45082431 - 45082606
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    |||||||||||| ||||||||| |||||||||||  |||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  45082431 aggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttg 45082529  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||| |||||| ||||||||||||||||||||||  ||||||||||||| ||||||| || |||||||||||    
T  45082530 ttgcatttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 218 - 384
Target Start/End: Original strand, 25447241 - 25447408
Alignment:
Q  218 attaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 317  Q
    ||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25447241 attaatggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 25447340  T
Q  318 ttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||||| ||||||    
T  25447341 ttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 46193408 - 46193567
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46193408 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgttgc 46193507  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||||||||||||||||||||||    
T  46193508 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttaga 46193567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 219 - 384
Target Start/End: Complemental strand, 48526731 - 48526565
Alignment:
Q  219 ttaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatt 318  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  48526731 ttaaaggtttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcact 48526632  T
Q  319 tttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||||||| |||||||| || ||||| |  ||||| |||  ||||||||||||||||||||    
T  48526631 tttgttgcatttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 54995068 - 54995230
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  54995068 aggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 54995167  T
Q  323 ttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||| |||||||| || ||||| |  ||||| ||||| |||||||||||||||||||    
T  54995168 ttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 20471053 - 20470895
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  20471053 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 20470954  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||| ||||||||    
T  20470953 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 383
Target Start/End: Original strand, 15523238 - 15523395
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  15523238 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttttgc 15523337  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||| |||||||| || ||||| |  ||| | ||| ||||||||||||||||||||    
T  15523338 atttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 340
Target Start/End: Complemental strand, 23494985 - 23494872
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494985 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 23494886  T
Q  327 attttttgtcctac 340  Q
    |||||| |||||||    
T  23494885 atttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 18751597 - 18751760
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18751597 aaggtttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcattttt 18751696  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| |||| ||| || ||||| |  ||||| ||| ||||| ||||| |||||||||    
T  18751697 gttgcatttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 223 - 384
Target Start/End: Complemental strand, 4220105 - 4219943
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||    
T  4220105 aggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttg 4220006  T
Q  323 ttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||| |||||||| || ||||| |  || |||||| |||||||||| ||||||||||    
T  4220005 ttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 220 - 350
Target Start/End: Complemental strand, 25938220 - 25938090
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  25938220 taaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattt 25938121  T
Q  320 ttgttgcattttttgtcctaccccccatttt 350  Q
    |||||||||||||||||||||| || |||||    
T  25938120 ttgttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 221 - 384
Target Start/End: Original strand, 11153143 - 11153307
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  11153143 aaaggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttt 11153242  T
Q  321 tgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||||| |||||||| || ||||| |  | ||| ||| |||||||||||||||||||||    
T  11153243 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 242 - 362
Target Start/End: Complemental strand, 43243807 - 43243688
Alignment:
Q  242 gtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctacc 341  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||     
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac- 43243709  T
Q  342 ccccattttattctccaaaaa 362  Q
    ||||||||||| |||||||||    
T  43243708 ccccattttatcctccaaaaa 43243688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 338
Target Start/End: Complemental strand, 18764062 - 18763951
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||    
T  18764062 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttgc 18763963  T
Q  327 attttttgtcct 338  Q
    |||||| |||||    
T  18763962 atttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 33110006 - 33109883
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||| | ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33110006 ttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33109907  T
Q  327 attttttgtcctaccccccatttt 350  Q
    |||||| |||||||| || |||||    
T  33109906 atttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 213 - 350
Target Start/End: Original strand, 2118282 - 2118419
Alignment:
Q  213 cattaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatt 312  Q
    |||| |||||||  |||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  |||||||||||    
T  2118282 cattgattaaagacttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaatt 2118381  T
Q  313 atcatttttgttgcattttttgtcctaccccccatttt 350  Q
    |||||||||||||||||||| |||||||| || |||||    
T  2118382 atcatttttgttgcatttttcgtcctacctcctatttt 2118419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 292 - 400
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  292 gaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgcc 391  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| || ||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  392 ccctatgct 400  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 20958401 - 20958268
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| |||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||   |||||||||||||||||||||||||    
T  20958401 ttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgttgc 20958302  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    || |||||||||| |||||||||||| |||||||||    
T  20958301 at-ttttgtccta-cccccattttatcctccaaaaa 20958268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 223 - 362
Target Start/End: Complemental strand, 48713892 - 48713753
Alignment:
Q  223 aggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 322  Q
    ||||||||||||||||||  | |||||||||| || |||||| |||| ||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  48713892 aggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttg 48713793  T
Q  323 ttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||| ||||| ||| ||||||||| |||||||||    
T  48713792 ttgcatttttcgtcctcccctccattttatcctccaaaaa 48713753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 51021337 - 51021180
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  51021337 ttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgttgc 51021239  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| ||||||||||| || ||||||    
T  51021238 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 242 - 365
Target Start/End: Complemental strand, 43281317 - 43281195
Alignment:
Q  242 gtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctacc 341  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||  || |||||||||| ||||||||||||||||| ||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  342 ccccattttattctccaaaaatgc 365  Q
    ||||||||||| ||| ||||||||    
T  43281218 ccccattttatcctcaaaaaatgc 43281195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 231 - 365
Target Start/End: Original strand, 20957196 - 20957330
Alignment:
Q  231 ttacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattt 330  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||||| | ||||||||||| |||||||  ||||||||||||||| |||||||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  331 tttgtcctaccccccattttattctccaaaaatgc 365  Q
    || ||| ||| ||||||||||||||| ||||||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaatgc 20957330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 360
Target Start/End: Original strand, 16690932 - 16691072
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||||||||||||| |||||||||| ||||||||   ||||||||||| ||||| ||||  ||||||||| |||||||   |||||||||||||||||    
T  16690932 taaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcattt 16691031  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaa 360  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  16691032 ttgttgcatttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 218 - 362
Target Start/End: Original strand, 48293588 - 48293732
Alignment:
Q  218 attaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcat 317  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||||||||| || || || |  ||||||||| |||||||  || |||||||||||||    
T  48293588 attataggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcat 48293687  T
Q  318 ttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||||||||  |||| ||| |||||||||||||||||||    
T  48293688 ttttgttgcatttttcatcctgccctccattttattctccaaaaa 48293732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 44892690 - 44892555
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| | ||||||||||||||||||| | ||||||||||| ||||  |||| ||||||||||||||||||| ||| |||||||||  ||||||||||    
T  44892690 ttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgttgc 44892591  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| ||||||||| ||||||||| |||||||||    
T  44892590 atttttcgtcctaccctccattttatcctccaaaaa 44892555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 241 - 384
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  241 ggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctac 340  Q
    ||||||||||||||| | |||||||||||||| ||  ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  341 cccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    | || ||||| |  ||||| ||| |||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 360
Target Start/End: Original strand, 48708298 - 48708431
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||  |||||||||| ||  ||||||| || || ||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  48708298 ttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgttgc 48708397  T
Q  327 attttttgtcctaccccccattttattctccaaa 360  Q
    |||| |  ||||||| | |||||||| |||||||    
T  48708398 atttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 35363143 - 35363028
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgccctttt-aaaacagaacaaaacggtccttcaattatcatttttgttg 325  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||  ||| ||||| |||| | |||||||||||| ||||||||||||||||||||    
T  35363143 ttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttgttg 35363044  T
Q  326 cattttttgtcctacc 341  Q
    ||||||| || |||||    
T  35363043 catttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 44890520 - 44890655
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| |||||||||| |||||||| | || |||||||| |||||||||||||||||||||||||||||   ||||| ||||||  ||||||||||    
T  44890520 ttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgttgc 44890619  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||  || ||||||||||||||| ||| |||||    
T  44890620 atttttcatcataccccccattttatcctcaaaaaa 44890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 350
Target Start/End: Complemental strand, 10258434 - 10258306
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||| ||||| |||||||||||||||||  ||||  ||  ||||||||||||||||    
T  10258434 aaggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcattttt 10258335  T
Q  322 gttgcattttttgtcctaccccccatttt 350  Q
    |||||| |||| ||| ||||||| |||||    
T  10258334 gttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 48295085 - 48294949
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||| |||||||| ||||||||||   ||||||||||| ||||| ||||  ||||||||| |||||||  ||| |||||||||||||||||||||    
T  48295085 ttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgttgc 48294986  T
Q  327 attttt-tgtcctaccccccattttattctccaaaaa 362  Q
    ||||||  |||||||||||||||||||  ||||||||    
T  48294985 atttttccgtcctaccccccattttatcttccaaaaa 48294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 16691613 - 16691481
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| |||  |||||||| | ||||||||||| ||||| ||||  |||||| || |||||||  |||||| |||||| |||||||||||    
T  16691613 ttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgttgc 16691515  T
Q  327 attttttgtcctaccccccattttattctccaaa 360  Q
    |||||| ||| |||| |||||||||| |||||||    
T  16691514 atttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 16318323 - 16318251
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaa 294  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||    
T  16318323 aaggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 43242328 - 43242408
Alignment:
Q  282 ttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| || |||||||  ||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaa 43242408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 334 - 400
Target Start/End: Complemental strand, 18752037 - 18751971
Alignment:
Q  334 gtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  18752037 gtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 55189531 - 55189639
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| | ||||| ||||||||||||| | || |||  ||| |||| |||||||||||||| |||||||||  ||| ||||||||||||||||| | |    
T  55189531 ttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttgctac 55189630  T
Q  327 attttttgt 335  Q
    |||||||||    
T  55189631 attttttgt 55189639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 44220861 - 44220784
Alignment:
Q  285 taaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||||||||  |||||||| |||||||||||||| ||||||| || |||||||  ||||||| |||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaa 44220784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 365
Target Start/End: Complemental strand, 55191318 - 55191178
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatta---tcatttttgt 323  Q
    ||||||| | |||||||  |||||||||| |||||||| |||| |||||||||| |||||||| |||| ||||  ||| || |||||   ||||||||||    
T  55191318 ttaattataattttggttttcgtgttttgacatactcatgaaaatggtcatgcc-ttttaaaatagaataaaattgtcttttaattactatcatttttgt 55191220  T
Q  324 tgcattttttgtcctaccccccattttattctccaaaaatgc 365  Q
    |||| |||| || ||| ||  |||||||| ||| ||||||||    
T  55191219 tgcacttttcgttctaaccatcattttatcctctaaaaatgc 55191178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 400
Target Start/End: Original strand, 17503972 - 17504149
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||| ||| ||||||||||  ||||| |   ||||||||| ||||| ||||  ||| |||  ||||| ||| |||||  || |||||| |||    
T  17503972 aaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgttt 17504070  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
     ||||| |||| |||||||| || |||||   ||||| ||| | |||||||||||||||||||| || |||||||||||    
T  17504071 tttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 30598059 - 30597939
Alignment:
Q  230 attacacttttggtcctcgtgttttggcatactcacgaaactggtcatg-cccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcat 328  Q
    |||||||||||||||||||||||||| |  ||||||| || ||||  || | |||||||| | ||||||||  |||| | |||||| ||||||||||||     
T  30598059 attacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttgttgcac 30597962  T
Q  329 tttttgtcctaccccccatttta 351  Q
    |||| |||||| |||| ||||||    
T  30597961 ttttggtcctaacccctatttta 30597939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 229151 - 229192
Alignment:
Q  214 attaattaaaggtttaattacacttttggtcctcgtgttttg 255  Q
    ||||| || ||||||||||||||||||||||||||| |||||    
T  229151 attaaatataggtttaattacacttttggtcctcgtattttg 229192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 17504365 - 17504329
Alignment:
Q  364 gcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||||||||||||| || |||||||||||    
T  17504365 gcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 24336306 - 24336190
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| || | | ||||||||| ||| ||||    
T  24336306 ttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgc 24336207  T
Q  327 attttttgtcctacccc 343  Q
      |||| ||||||||||    
T  24336206 tcttttagtcctacccc 24336190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 35193447 - 35193483
Alignment:
Q  364 gcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||||||||||||||||||| || |||||||||||    
T  35193447 gcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 222 - 400
Target Start/End: Original strand, 64300 - 64478
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  64300 aaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcattttt 64399  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  64400 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 214 - 339
Target Start/End: Complemental strand, 64860 - 64735
Alignment:
Q  214 attaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatta 313  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  64860 attaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaatta 64761  T
Q  314 tcatttttgttgcattttttgtccta 339  Q
    ||||||||||||||||||| ||||||    
T  64760 tcatttttgttgcatttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 205910 - 205738
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| ||||||   ||||| |  |||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || |||||| ||| ||||    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttgc 205812  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    | |||| |||||||  || |||||   ||||||||| ||||||||||| |||||||||| || |||||||||||    
T  205811 agttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 222 - 400
Target Start/End: Original strand, 33328156 - 33328334
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33328156 aaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcattttt 33328255  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||| ||||||||| | ||||||||||||||||| ||| |||||||||||||||||| || |||||||||||    
T  33328256 gttgcatttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 19176832 - 19176659
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176832 ttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176733  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || || ||||||||    
T  19176732 atttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 44831787 - 44831614
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  44831787 ttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgttgc 44831688  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||| || |||||||||||    
T  44831687 atttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 227 - 383
Target Start/End: Original strand, 41681137 - 41681292
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681137 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681236  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41681237 atttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagtttta 41681292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 227 - 400
Target Start/End: Original strand, 12571866 - 12572040
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||    
T  12571866 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 12571965  T
Q  327 attttttgtcct-accccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  12571966 atttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 220 - 400
Target Start/End: Complemental strand, 9930206 - 9930026
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||    
T  9930206 taaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcattt 9930107  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||| || |||||||||||    
T  9930106 ttgttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 227 - 398
Target Start/End: Original strand, 11656458 - 11656630
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  11656458 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgttgc 11656557  T
Q  327 attttttgtcctaccccccattttattctcc-aaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||||| || |||| ||||    
T  11656558 atttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 228 - 400
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  228 taattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 327  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  328 ttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 31133223 - 31133381
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||  |||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  31133223 ttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgttgc 31133322  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  31133323 atttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttaga 31133381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 217 - 384
Target Start/End: Complemental strand, 13225191 - 13225023
Alignment:
Q  217 aattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatca 316  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13225191 aattaaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatca 13225092  T
Q  317 tttttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||| |||||||||    
T  13225091 tttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 9178177 - 9178005
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  9178177 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 9178078  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||  || || |||||||||||||||| ||||| |||||||||||||| ||||||| || || ||||||||    
T  9178077 atttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 19176293 - 19176451
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176293 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19176392  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||| ||| || ||||| |  ||||| ||| |||||||||||||| ||||||    
T  19176393 atttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 224 - 384
Target Start/End: Complemental strand, 12572396 - 12572235
Alignment:
Q  224 ggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 323  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12572396 ggtttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 12572297  T
Q  324 tgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||  |||||||||    
T  12572296 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 227 - 383
Target Start/End: Complemental strand, 31133762 - 31133605
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31133762 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgttgc 31133663  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagtttta 383  Q
    |||||| ||| |||| || ||||| |  ||||| ||||||||||||||||| ||||||    
T  31133662 atttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 222 - 384
Target Start/End: Original strand, 44831245 - 44831408
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  44831245 aaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcattttt 44831344  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||| |||||||| || ||||| |  ||||| ||| |||||||||||| ||||||||    
T  44831345 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| ||  |||| |  ||||| ||| ||||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 220 - 384
Target Start/End: Complemental strand, 11657006 - 11656841
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||    
T  11657006 taaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcattt 11656907  T
Q  320 ttgttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    ||||||||||||| |||||||| || ||||| |  ||||| ||| ||||||||||  |||||||||    
T  11656906 ttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 33328682 - 33328524
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| |||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  33328682 ttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttgc 33328583  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||| ||| |||||||| |  ||||| ||| ||||||||||| |||||||||    
T  33328582 atttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 384
Target Start/End: Original strand, 33742925 - 33743082
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  33742925 ttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttgatgc 33743023  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| || | ||| ||| |||||||||||||||||||||    
T  33743024 atttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 41681676 - 41681562
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41681676 ttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41681577  T
Q  327 attttttgtcctacc 341  Q
    |||||| ||||||||    
T  41681576 atttttcgtcctacc 41681562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 34541090 - 34540967
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  34541090 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgttgc 34540991  T
Q  327 attttttgtcctaccccccatttt 350  Q
    |||||| |||||||| || |||||    
T  34540990 atttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 225 - 400
Target Start/End: Complemental strand, 4630330 - 4630161
Alignment:
Q  225 gtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 324  Q
    ||||||||||||||||| || |||||||||||  ||||||||||| ||||| |||  ||||||||||||| | |||||||||||||||||      ||||    
T  4630330 gtttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgtt 4630237  T
Q  325 gcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    ||||||||  |||||||||||||||||||||||||||| ||||| |||||||||||||||| || |||||||||||    
T  4630236 gcatttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 277 - 398
Target Start/End: Complemental strand, 33743411 - 33743290
Alignment:
Q  277 tgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgac 376  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||    
T  33743411 tgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataac 33743312  T
Q  377 agttttagatctgccccctatg 398  Q
    ||||||||| || | |||||||    
T  33743311 agttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 227 - 333
Target Start/End: Complemental strand, 11337064 - 11336958
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  11337064 ttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgttgc 11336965  T
Q  327 atttttt 333  Q
    |||||||    
T  11336964 atttttt 11336958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 378
Target Start/End: Original strand, 4629800 - 4629952
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||| |||||||  | |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  4629800 ttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttattgc 4629899  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacag 378  Q
    |||||| ||| |||| || ||||| |  ||||| ||| ||| |||||||||||    
T  4629900 atttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 362
Target Start/End: Original strand, 10918115 - 10918264
Alignment:
Q  213 cattaattaaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaatt 312  Q
    ||||||||  ||||||||||||| |||| ||||||||||||||   ||||||||||| ||||| ||||   |||||||||| |||||  ||||||||| |    
T  10918115 cattaattttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaat 10918214  T
Q  313 atcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||||||||||||||||  || ||||||||||||||| |||||||||    
T  10918215 atcatttttgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 8074098 - 8073959
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    |||| ||| ||| ||||||||||||||||||||||| || |||||||| || ||||| ||||||||||||||||||||   |||||||||||||| ||||    
T  8074098 aaggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-tttt 8074000  T
Q  322 gttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||||||||  |||  | |||||||||||  |||||||||    
T  8073999 gttgcattttacgtcaaaacccccattttaccctccaaaaa 8073959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 43958264 - 43958323
Alignment:
Q  303 tccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaa 43958323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 9177670 - 9177700
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggc 257  Q
    |||||||||||||||||||||||||||||||    
T  9177670 ttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 28877438 - 28877385
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggt 274  Q
    ||||||||||||||||||||||||||||  ||||| |  |||||||||| ||||    
T  28877438 aaaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggt 28877385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 138; Significance: 5e-72; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 134215 - 134042
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  134215 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgttgc 134116  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  134115 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 136; Significance: 8e-71; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 227 - 398
Target Start/End: Original strand, 1670 - 1841
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1670 ttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgttgc 1769  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatg 398  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||    
T  1770 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 227 - 384
Target Start/End: Complemental strand, 2209 - 2051
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2209 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgc 2110  T
Q  327 attttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    |||||| |||||||| || ||||| |  ||||| ||| |||||||||||| ||||||||    
T  2109 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 126; Significance: 7e-65; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||| | || |||||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 221 - 331
Target Start/End: Original strand, 9929 - 10039
Alignment:
Q  221 aaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 320  Q
    |||| |||||||||| |||||||||||||||||| || || ||||||||||| || ||||||||||| | ||||||||| |||||||||||||||| |||    
T  9929 aaagatttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattt 10028  T
Q  321 tgttgcatttt 331  Q
    |||| ||||||    
T  10029 tgttacatttt 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 227 - 385
Target Start/End: Original strand, 756 - 913
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  756 ttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttgc 854  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  855 atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaga 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 1283 - 1160
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1283 ttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 1184  T
Q  327 attttttgtcctaccccccatttt 350  Q
    || ||| |||||||| || |||||    
T  1183 atctttcgtcctacctcctatttt 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 243 - 400
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  243 tcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccc 342  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  343 cccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
     ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 227 - 350
Target Start/End: Complemental strand, 11165 - 11042
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11165 ttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgttgc 11066  T
Q  327 attttttgtcctaccccccatttt 350  Q
    |||||| |||||||| || |||||    
T  11065 atttttcgtcctacctcctatttt 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 111; Significance: 7e-56; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 227 - 400
Target Start/End: Complemental strand, 42700 - 42528
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||| |||||||| |||||||||||||  |||||| ||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  42700 ttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgtttc 42601  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgccccctatgct 400  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  42600 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 222 - 385
Target Start/End: Original strand, 42167 - 42331
Alignment:
Q  222 aaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    ||||||||||||||||||| || ||||||||||||  || ||||||||||| || |||| ||||||||||||||||||||||| ||||||||||||||||    
T  42167 aaggtttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcattttt 42266  T
Q  322 gttgcattttttgtcctaccccccatttt-attctccaaaaatgcagagaaatgacagttttaga 385  Q
    ||||||||||||||| |||| || ||||| |  || || ||| ||||||||||||||||||||||    
T  42267 gttgcattttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttaga 42331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 110; Significance: 3e-55; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 220 - 385
Target Start/End: Original strand, 18831 - 18995
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||||| || |||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  18831 taaaggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcattt 18930  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttaga 385  Q
    |||||||||||||  ||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  18931 ttgttgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttaga 18995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 227 - 321
Target Start/End: Complemental strand, 19163 - 19069
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 321  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19163 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 228 - 350
Target Start/End: Complemental strand, 28784 - 28662
Alignment:
Q  228 taattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 327  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  328 ttttttgtcctaccccccatttt 350  Q
     |||| ||||| |||||||||||    
T  28684 gttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 570 - 705
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  570 ttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgttgt 669  T
Q  327 attttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||| |||  ||| ||||||| || |||||||||    
T  670 atttttcgtctcacctcccatttgatcctccaaaaa 705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 292 - 400
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  292 gaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagatctgcc 391  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| || ||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  392 ccctatgct 400  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 241 - 384
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  241 ggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctac 340  Q
    ||||||||||||||| | |||||||||||||| ||  ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  341 cccccatttt-attctccaaaaatgcagagaaatgacagttttag 384  Q
    | || ||||| |  ||||| ||| |||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 220 - 362
Target Start/End: Complemental strand, 62007 - 61865
Alignment:
Q  220 taaaggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 319  Q
    |||| ||||||||||||||||| ||||||||||||||  ||||||||||| ||||| | ||||||||||| |||||||||   || ||||| ||||||||    
T  62007 taaaagtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcattt 61908  T
Q  320 ttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||  |||||| ||||||||||||||||| | |||||||||    
T  61907 ttgttatatttttcgtcctaccccccattttgtcctccaaaaa 61865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 365
Target Start/End: Original strand, 61031 - 61169
Alignment:
Q  227 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 326  Q
    |||| |||||||||| ||||||||||||||| ||||||||||| || || |||| |||||||| |||||||| | |||| |  | ||||||  || ||||    
T  61031 ttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaagcagtccctatactatcatgctttttgc 61130  T
Q  327 attttttgtcctaccccccattttattctccaaaaatgc 365  Q
    | |||| ||| || ||| |||||| | ||||||||||||    
T  61131 aattttggtcataaccctcattttgtcctccaaaaatgc 61169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 327
Target Start/End: Complemental strand, 8554 - 8451
Alignment:
Q  224 ggtttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 323  Q
    ||||||||||||||||||||| || ||||||||  |||| |||||||||||| | ||||||||||||| | |||||||||||||||||||||||||||||    
T  8554 ggtttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgt 8455  T
Q  324 tgca 327  Q
    ||||    
T  8454 tgca 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 362
Target Start/End: Original strand, 454 - 586
Alignment:
Q  228 taattacacttttggtcctcgtgttttggcatactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgca 327  Q
    |||||||| |||||||| |||||||||||| ||||||||||| ||||||||  ||||||||||| |||| ||  ||||||||||||||||||||||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  328 ttttttgtcctaccccccattttattctccaaaaa 362  Q
    ||||| |||||| | |||||||||| ||| |||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaa 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 279 - 362
Target Start/End: Complemental strand, 7778 - 7695
Alignment:
Q  279 cccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcattttttgtcctaccccccattttattctccaaaaa 362  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  7778 cccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaa 7695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University