View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6277_low_3 (Length: 690)

Name: NF6277_low_3
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6277_low_3
NF6277_low_3
[»] chr1 (45 HSPs)
chr1 (360-677)||(8016609-8016926)
chr1 (19-151)||(43254612-43254744)
chr1 (20-151)||(50395026-50395157)
chr1 (19-151)||(24294720-24294852)
chr1 (19-151)||(39760077-39760209)
chr1 (19-86)||(17671647-17671714)
chr1 (19-86)||(51965725-51965792)
chr1 (94-151)||(17672315-17672372)
chr1 (94-151)||(44407219-44407276)
chr1 (19-86)||(13662398-13662465)
chr1 (19-86)||(28565708-28565775)
chr1 (19-86)||(44406551-44406618)
chr1 (19-86)||(50561232-50561299)
chr1 (19-86)||(52310025-52310092)
chr1 (94-151)||(10694136-10694193)
chr1 (94-151)||(47136137-47136194)
chr1 (95-151)||(12245230-12245286)
chr1 (95-151)||(16030944-16031000)
chr1 (94-138)||(41829421-41829465)
chr1 (95-151)||(52310698-52310754)
chr1 (94-149)||(18815055-18815110)
chr1 (19-86)||(28631503-28631570)
chr1 (94-149)||(31620525-31620580)
chr1 (94-149)||(36682902-36682957)
chr1 (19-86)||(38845240-38845307)
chr1 (19-86)||(47135586-47135653)
chr1 (20-86)||(12714669-12714735)
chr1 (95-149)||(41962296-41962350)
chr1 (27-85)||(45004931-45004989)
chr1 (94-151)||(5426838-5426895)
chr1 (94-151)||(16300905-16300962)
chr1 (94-151)||(38844532-38844589)
chr1 (95-151)||(4891947-4892003)
chr1 (95-151)||(29186484-29186540)
chr1 (19-86)||(16031596-16031663)
chr1 (94-149)||(34688423-34688478)
chr1 (94-149)||(48341179-48341234)
chr1 (95-149)||(34692952-34693006)
chr1 (27-85)||(36681442-36681500)
chr1 (95-149)||(52520977-52521031)
chr1 (96-149)||(45005635-45005688)
chr1 (95-151)||(33361550-33361606)
chr1 (27-86)||(12245833-12245892)
chr1 (94-139)||(50561910-50561955)
chr1 (20-64)||(15317440-15317484)
[»] chr8 (57 HSPs)
chr8 (19-151)||(6300545-6300677)
chr8 (19-151)||(37029765-37029897)
chr8 (20-151)||(44940370-44940501)
chr8 (19-151)||(23966448-23966580)
chr8 (19-151)||(42060723-42060855)
chr8 (19-86)||(12250192-12250259)
chr8 (94-149)||(30826963-30827018)
chr8 (90-149)||(33423619-33423678)
chr8 (19-86)||(39444948-39445015)
chr8 (19-86)||(41977386-41977453)
chr8 (94-149)||(42785741-42785796)
chr8 (95-151)||(7015746-7015802)
chr8 (94-149)||(9761840-9761895)
chr8 (94-149)||(14078190-14078245)
chr8 (19-86)||(22333114-22333181)
chr8 (19-86)||(23522650-23522717)
chr8 (19-86)||(38993610-38993677)
chr8 (19-86)||(41156566-41156633)
chr8 (19-86)||(44382794-44382861)
chr8 (19-86)||(44599629-44599696)
chr8 (94-148)||(19394900-19394954)
chr8 (97-151)||(45291821-45291875)
chr8 (94-151)||(41629472-41629529)
chr8 (97-149)||(22332064-22332116)
chr8 (95-151)||(38994281-38994337)
chr8 (95-151)||(44600297-44600353)
chr8 (94-149)||(5836166-5836221)
chr8 (19-86)||(6477486-6477553)
chr8 (96-151)||(12760825-12760880)
chr8 (19-86)||(19248035-19248102)
chr8 (19-86)||(19321219-19321286)
chr8 (19-86)||(23626337-23626404)
chr8 (94-149)||(36597372-36597427)
chr8 (97-151)||(19248726-19248780)
chr8 (97-151)||(19321910-19321964)
chr8 (95-149)||(23521997-23522051)
chr8 (94-151)||(4465827-4465884)
chr8 (94-151)||(7389826-7389883)
chr8 (94-151)||(41978100-41978157)
chr8 (94-151)||(44382131-44382188)
chr8 (95-151)||(25615863-25615919)
chr8 (19-86)||(12760402-12760469)
chr8 (27-86)||(22946807-22946866)
chr8 (94-149)||(27273804-27273859)
chr8 (19-86)||(38962096-38962163)
chr8 (19-86)||(38992440-38992507)
chr8 (19-86)||(39204558-39204625)
chr8 (19-86)||(42810930-42810997)
chr8 (95-148)||(22946140-22946193)
chr8 (21-86)||(29433968-29434033)
chr8 (94-151)||(41533190-41533247)
chr8 (95-151)||(25620137-25620193)
chr8 (19-86)||(41628818-41628885)
chr8 (100-149)||(38962782-38962831)
chr8 (106-151)||(41157180-41157225)
chr8 (19-82)||(3751038-3751102)
chr8 (94-150)||(25345138-25345194)
[»] chr4 (61 HSPs)
chr4 (19-151)||(15520918-15521050)
chr4 (19-151)||(740365-740497)
chr4 (94-149)||(15642423-15642478)
chr4 (19-86)||(26870309-26870376)
chr4 (19-86)||(38008046-38008113)
chr4 (95-149)||(21353891-21353945)
chr4 (94-151)||(28134764-28134821)
chr4 (94-151)||(38009134-38009191)
chr4 (95-151)||(7643167-7643223)
chr4 (95-151)||(17700048-17700104)
chr4 (94-149)||(23479749-23479804)
chr4 (94-149)||(41983592-41983647)
chr4 (94-149)||(53343280-53343335)
chr4 (94-149)||(54331130-54331185)
chr4 (95-149)||(2777149-2777203)
chr4 (20-86)||(17740243-17740309)
chr4 (95-149)||(34055950-34056004)
chr4 (94-151)||(17740916-17740973)
chr4 (94-151)||(19830759-19830816)
chr4 (94-151)||(33502363-33502420)
chr4 (90-151)||(47556784-47556845)
chr4 (19-83)||(7643815-7643879)
chr4 (19-86)||(13628254-13628322)
chr4 (23-86)||(2776483-2776546)
chr4 (19-86)||(3839385-3839452)
chr4 (90-149)||(5271662-5271721)
chr4 (19-86)||(8531018-8531085)
chr4 (19-86)||(19831417-19831484)
chr4 (19-86)||(21353286-21353353)
chr4 (23-86)||(22116071-22116134)
chr4 (19-86)||(28973264-28973331)
chr4 (19-86)||(41984254-41984321)
chr4 (95-149)||(22115415-22115469)
chr4 (95-149)||(36514704-36514758)
chr4 (94-151)||(2116703-2116760)
chr4 (94-151)||(37700960-37701017)
chr4 (94-151)||(40623021-40623078)
chr4 (94-146)||(14828901-14828953)
chr4 (95-151)||(39714903-39714959)
chr4 (19-86)||(40622349-40622417)
chr4 (95-151)||(52800872-52800928)
chr4 (94-149)||(19109121-19109176)
chr4 (19-86)||(28135085-28135152)
chr4 (19-86)||(33503017-33503084)
chr4 (19-86)||(36857289-36857356)
chr4 (94-149)||(39742359-39742414)
chr4 (19-86)||(39742766-39742833)
chr4 (19-86)||(53342611-53342678)
chr4 (95-149)||(55998076-55998130)
chr4 (94-151)||(46104776-46104833)
chr4 (95-151)||(12682161-12682217)
chr4 (95-151)||(28973935-28973991)
chr4 (19-86)||(17699379-17699446)
chr4 (100-151)||(35494966-35495017)
chr4 (19-86)||(35495563-35495630)
chr4 (96-151)||(36857930-36857985)
chr4 (19-86)||(37701619-37701686)
chr4 (168-197)||(33486391-33486420)
chr4 (19-63)||(1944694-1944738)
chr4 (97-149)||(13628926-13628978)
chr4 (18-86)||(14829531-14829599)
[»] chr3 (46 HSPs)
chr3 (19-151)||(39796413-39796545)
chr3 (19-151)||(5252314-5252446)
chr3 (94-149)||(52462275-52462330)
chr3 (94-151)||(49113903-49113960)
chr3 (19-86)||(11597968-11598035)
chr3 (90-149)||(21698936-21698995)
chr3 (90-149)||(31368388-31368447)
chr3 (93-149)||(19353720-19353776)
chr3 (19-86)||(16496072-16496139)
chr3 (94-149)||(18741577-18741632)
chr3 (94-149)||(50770619-50770674)
chr3 (19-86)||(50771252-50771319)
chr3 (19-86)||(51248531-51248598)
chr3 (19-86)||(52462938-52463005)
chr3 (90-148)||(54934657-54934715)
chr3 (19-84)||(16341837-16341902)
chr3 (90-151)||(23195044-23195105)
chr3 (94-151)||(40824013-40824070)
chr3 (95-151)||(39093181-39093237)
chr3 (95-151)||(52842438-52842494)
chr3 (19-86)||(11383294-11383361)
chr3 (19-86)||(40827040-40827107)
chr3 (19-86)||(48521027-48521094)
chr3 (96-151)||(48988911-48988966)
chr3 (20-83)||(49113249-49113312)
chr3 (100-151)||(54513647-54513698)
chr3 (95-149)||(6103493-6103547)
chr3 (94-148)||(32756362-32756416)
chr3 (94-148)||(35087225-35087279)
chr3 (94-151)||(8243358-8243415)
chr3 (96-149)||(11597368-11597421)
chr3 (95-136)||(16342504-16342545)
chr3 (21-86)||(50741536-50741601)
chr3 (94-151)||(51249154-51249211)
chr3 (96-149)||(54648240-54648293)
chr3 (95-151)||(26777276-26777332)
chr3 (95-151)||(52852802-52852858)
chr3 (94-144)||(19406691-19406741)
chr3 (20-86)||(32755699-32755765)
chr3 (19-85)||(54792971-54793037)
chr3 (94-139)||(4138142-4138187)
chr3 (94-151)||(48520383-48520440)
chr3 (19-86)||(48976866-48976933)
chr3 (19-86)||(55294785-55294851)
chr3 (94-148)||(50742223-50742277)
chr3 (94-151)||(55294124-55294181)
[»] chr2 (50 HSPs)
chr2 (19-151)||(28502369-28502501)
chr2 (19-149)||(6342787-6342917)
chr2 (19-151)||(1993010-1993142)
chr2 (19-151)||(14323269-14323401)
chr2 (19-86)||(28380010-28380077)
chr2 (19-86)||(33663801-33663868)
chr2 (19-86)||(36633093-36633160)
chr2 (94-151)||(33663115-33663172)
chr2 (94-151)||(45399678-45399735)
chr2 (95-151)||(35285642-35285698)
chr2 (94-149)||(16723723-16723778)
chr2 (19-86)||(17091995-17092062)
chr2 (94-149)||(26822483-26822538)
chr2 (19-86)||(26827718-26827785)
chr2 (90-149)||(36632396-36632455)
chr2 (94-149)||(42886266-42886321)
chr2 (95-149)||(5253221-5253275)
chr2 (95-149)||(18137828-18137882)
chr2 (95-149)||(27364202-27364256)
chr2 (94-151)||(11448621-11448678)
chr2 (94-151)||(18092079-18092136)
chr2 (94-151)||(19167207-19167264)
chr2 (33-86)||(45398974-45399027)
chr2 (95-151)||(11707501-11707557)
chr2 (19-86)||(17025810-17025877)
chr2 (95-151)||(26828386-26828442)
chr2 (95-151)||(33908118-33908174)
chr2 (19-86)||(17037487-17037554)
chr2 (94-149)||(21098552-21098607)
chr2 (19-86)||(33907446-33907513)
chr2 (19-86)||(35286347-35286414)
chr2 (94-149)||(45204355-45204410)
chr2 (95-149)||(19126060-19126114)
chr2 (94-151)||(1514330-1514387)
chr2 (94-151)||(10048375-10048432)
chr2 (19-80)||(19167654-19167715)
chr2 (94-151)||(28608456-28608513)
chr2 (19-86)||(1514996-1515064)
chr2 (95-151)||(4291032-4291088)
chr2 (95-151)||(9543998-9544054)
chr2 (100-151)||(4812423-4812474)
chr2 (19-86)||(11706831-11706898)
chr2 (19-86)||(18092729-18092796)
chr2 (19-86)||(42885594-42885661)
chr2 (19-83)||(30570559-30570624)
chr2 (19-83)||(30572439-30572504)
chr2 (19-86)||(26821838-26821905)
chr2 (36-86)||(4811782-4811832)
chr2 (19-85)||(45205026-45205092)
chr2 (19-51)||(10821246-10821278)
[»] chr7 (43 HSPs)
chr7 (19-151)||(47573397-47573529)
chr7 (19-151)||(6911419-6911551)
chr7 (94-149)||(33031712-33031767)
chr7 (19-86)||(42996635-42996702)
chr7 (94-151)||(19521991-19522048)
chr7 (19-86)||(4481396-4481463)
chr7 (94-149)||(8925286-8925341)
chr7 (19-86)||(17469919-17469986)
chr7 (19-86)||(17583228-17583295)
chr7 (19-86)||(33638685-33638752)
chr7 (19-86)||(38434559-38434626)
chr7 (96-151)||(42826704-42826759)
chr7 (95-149)||(17470587-17470641)
chr7 (95-149)||(17582573-17582627)
chr7 (97-151)||(42918726-42918780)
chr7 (21-86)||(17478077-17478142)
chr7 (21-86)||(17482520-17482585)
chr7 (21-86)||(17570629-17570694)
chr7 (21-86)||(17575072-17575137)
chr7 (94-151)||(33638021-33638078)
chr7 (94-151)||(42688409-42688466)
chr7 (90-151)||(49145639-49145700)
chr7 (19-86)||(9149549-9149616)
chr7 (19-86)||(11500046-11500113)
chr7 (19-86)||(19521312-19521379)
chr7 (94-151)||(23299070-23299127)
chr7 (94-151)||(47175320-47175377)
chr7 (95-151)||(17170873-17170929)
chr7 (95-151)||(39649331-39649387)
chr7 (26-86)||(47174647-47174707)
chr7 (95-151)||(48528141-48528197)
chr7 (19-86)||(23299732-23299799)
chr7 (105-151)||(11500718-11500764)
chr7 (95-149)||(14309701-14309755)
chr7 (32-86)||(42918023-42918077)
chr7 (94-151)||(4848957-4849014)
chr7 (94-135)||(5963540-5963581)
chr7 (21-86)||(42244865-42244930)
chr7 (95-139)||(31898184-31898228)
chr7 (19-86)||(42827356-42827422)
chr7 (94-151)||(27734398-27734453)
chr7 (19-85)||(33030983-33031049)
chr7 (94-151)||(9150184-9150241)
[»] chr5 (51 HSPs)
chr5 (19-151)||(31295612-31295744)
chr5 (19-148)||(19395505-19395634)
chr5 (19-86)||(20995947-20996014)
chr5 (19-86)||(41780977-41781044)
chr5 (90-149)||(20995239-20995298)
chr5 (19-86)||(21030257-21030324)
chr5 (94-148)||(26320448-26320502)
chr5 (94-151)||(12419923-12419980)
chr5 (90-151)||(41781730-41781791)
chr5 (95-151)||(287072-287128)
chr5 (19-86)||(10512367-10512434)
chr5 (19-86)||(20758095-20758162)
chr5 (95-149)||(17997386-17997440)
chr5 (95-149)||(20758763-20758817)
chr5 (94-151)||(10511723-10511780)
chr5 (94-151)||(33931040-33931097)
chr5 (95-151)||(33706115-33706171)
chr5 (95-151)||(34373728-34373784)
chr5 (95-151)||(38935268-38935324)
chr5 (94-149)||(2195955-2196010)
chr5 (19-86)||(3028903-3028970)
chr5 (19-86)||(9702401-9702468)
chr5 (93-148)||(19448811-19448866)
chr5 (90-149)||(30690120-30690179)
chr5 (19-85)||(3150608-3150674)
chr5 (20-86)||(3210203-3210269)
chr5 (95-149)||(7286472-7286526)
chr5 (94-151)||(3149949-3150006)
chr5 (21-86)||(20350073-20350138)
chr5 (90-151)||(27066685-27066746)
chr5 (19-80)||(34374389-34374450)
chr5 (94-151)||(34726739-34726796)
chr5 (95-151)||(3029572-3029628)
chr5 (95-151)||(41691123-41691179)
chr5 (19-86)||(4882421-4882488)
chr5 (94-149)||(20350752-20350807)
chr5 (94-149)||(21030926-21030981)
chr5 (19-86)||(27066022-27066089)
chr5 (19-86)||(33706782-33706849)
chr5 (19-86)||(35539922-35539989)
chr5 (95-148)||(34717437-34717490)
chr5 (97-149)||(4883000-4883052)
chr5 (95-151)||(25696899-25696955)
chr5 (95-151)||(30142350-30142406)
chr5 (19-86)||(7285826-7285893)
chr5 (19-86)||(17996714-17996781)
chr5 (19-86)||(33929943-33930010)
chr5 (95-149)||(33610510-33610564)
chr5 (95-149)||(35539271-35539325)
chr5 (34-86)||(1851963-1852015)
chr5 (19-79)||(19448152-19448212)
[»] chr6 (37 HSPs)
chr6 (19-151)||(13456793-13456925)
chr6 (94-151)||(4425312-4425369)
chr6 (90-149)||(34856760-34856819)
chr6 (90-151)||(35158805-35158866)
chr6 (19-86)||(18311958-18312025)
chr6 (94-149)||(18598365-18598420)
chr6 (94-149)||(33814803-33814858)
chr6 (95-148)||(11932863-11932916)
chr6 (19-86)||(35041260-35041327)
chr6 (95-149)||(2521951-2522005)
chr6 (20-86)||(17939690-17939756)
chr6 (95-149)||(22373200-22373254)
chr6 (20-86)||(33321465-33321531)
chr6 (95-149)||(35041923-35041977)
chr6 (94-151)||(14832322-14832379)
chr6 (96-149)||(14887318-14887371)
chr6 (94-151)||(17940355-17940412)
chr6 (94-151)||(25540778-25540835)
chr6 (25-86)||(34321266-34321327)
chr6 (95-151)||(1220365-1220421)
chr6 (95-151)||(9979445-9979501)
chr6 (95-151)||(24445774-24445830)
chr6 (94-149)||(1072643-1072698)
chr6 (94-149)||(18312625-18312680)
chr6 (19-86)||(30044375-30044442)
chr6 (19-85)||(4424652-4424718)
chr6 (95-149)||(21800354-21800408)
chr6 (94-148)||(33320807-33320861)
chr6 (97-151)||(34321926-34321980)
chr6 (94-151)||(4108564-4108621)
chr6 (96-149)||(7223136-7223189)
chr6 (20-80)||(15275826-15275886)
chr6 (19-86)||(14831652-14831719)
chr6 (19-86)||(18598999-18599066)
chr6 (19-86)||(22373854-22373921)
chr6 (95-144)||(15276472-15276521)
chr6 (19-80)||(25540240-25540301)
[»] scaffold0088 (1 HSPs)
scaffold0088 (19-86)||(52973-53040)
[»] scaffold0045 (2 HSPs)
scaffold0045 (19-86)||(12936-13003)
scaffold0045 (94-151)||(12272-12329)
[»] scaffold0006 (2 HSPs)
scaffold0006 (19-86)||(152160-152227)
scaffold0006 (19-63)||(64662-64706)
[»] scaffold0242 (2 HSPs)
scaffold0242 (20-86)||(3424-3490)
scaffold0242 (95-151)||(2767-2823)
[»] scaffold0169 (1 HSPs)
scaffold0169 (95-149)||(17006-17060)
[»] scaffold0016 (2 HSPs)
scaffold0016 (95-151)||(101567-101623)
scaffold0016 (27-86)||(100790-100849)
[»] scaffold0079 (2 HSPs)
scaffold0079 (19-86)||(10615-10682)
scaffold0079 (94-139)||(10091-10136)
[»] scaffold0236 (1 HSPs)
scaffold0236 (19-85)||(26668-26734)
[»] scaffold0171 (2 HSPs)
scaffold0171 (97-151)||(29697-29751)
scaffold0171 (19-86)||(30003-30069)
[»] scaffold0010 (1 HSPs)
scaffold0010 (94-148)||(120760-120814)
[»] scaffold0115 (1 HSPs)
scaffold0115 (94-139)||(3268-3313)
[»] scaffold0057 (1 HSPs)
scaffold0057 (95-151)||(18764-18820)
[»] scaffold0047 (2 HSPs)
scaffold0047 (94-146)||(25712-25764)
scaffold0047 (18-86)||(26365-26433)
[»] scaffold0009 (1 HSPs)
scaffold0009 (95-151)||(231820-231876)
[»] scaffold0005 (2 HSPs)
scaffold0005 (94-146)||(10756-10808)
scaffold0005 (18-86)||(10110-10178)
[»] scaffold1634 (1 HSPs)
scaffold1634 (94-151)||(380-437)
[»] scaffold0121 (1 HSPs)
scaffold0121 (95-148)||(14680-14733)
[»] scaffold0110 (2 HSPs)
scaffold0110 (95-151)||(48584-48640)
scaffold0110 (19-86)||(49240-49307)
[»] scaffold0069 (1 HSPs)
scaffold0069 (95-139)||(13580-13624)
[»] scaffold1891 (1 HSPs)
scaffold1891 (95-149)||(257-311)
[»] scaffold0122 (1 HSPs)
scaffold0122 (95-149)||(5327-5381)
[»] scaffold0032 (2 HSPs)
scaffold0032 (94-139)||(4323-4368)
scaffold0032 (94-139)||(10772-10817)


Alignment Details
Target: chr1 (Bit Score: 314; Significance: 1e-177; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 360 - 677
Target Start/End: Complemental strand, 8016926 - 8016609
Alignment:
Q  360 tctgtttctgtttctgttactgttacctctaccgtgggaccctttcttccacgatcccatcggcgatcaacaacagccgtccgatccaacaaggtttcag 459  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8016926 tctgtttctgttactgttactgttacctctaccgtgggaccctttcttccacgatcccatcggcgatcaacaacagccgtccgatccaacaaggtttcag 8016827  T
Q  460 ttggaccaacgagattattaacgaaactcaaacaagactgtgcaactcctctacctcttcttcaccatgttgctgatgcaatgtcttctgaaatgcgggc 559  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8016826 ttggaccaacgagattattaacgaaactcaaacaagactgtgcaactcctctacctcttcttcaccatgttgctgatgcaatgtcttctgaaatgcgggc 8016727  T
Q  560 tgggctttcctccgttgatgggcccgggcttcccatgataccaacttatgtccacactcttccctccgggtatgtatgtcgtatgtcatacactaataaa 659  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8016726 tgggctttcctccgttgatgggcccgggcttcccatgataccaacttatgtccacactcttccctccgggtatgtatgtcgtatgtcatacactaataaa 8016627  T
Q  660 tatgttatctctgatgat 677  Q
    ||||||||||||||||||    
T  8016626 tatgttatctctgatgat 8016609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 43254744 - 43254612
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  43254744 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaatcat 43254645  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  43254644 aatgttccgtcgttttaacatatcttctttcga 43254612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 50395157 - 50395026
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcata 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  50395157 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaatcata 50395058  T
Q  120 atgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||| ||||||||||||||||||||||||||    
T  50395057 atgttccgtcgttttaacatatcttctttcga 50395026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 24294720 - 24294852
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||     
T  24294720 gttttcctaatctcttgaacaaaatagaacatgctctttttctacagcaaatctttataatgctttggaaccagcccatacatattttatgatgaatcac 24294819  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  24294820 aatgttccgtcgttttaacatatcttctttcga 24294852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 39760209 - 39760077
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  39760209 gtttttctaatctcttgaacaaaatagaacatgctctttttctacagcaaatctttataatgctttgaaaccagcccatacatattttatgatgaatcac 39760110  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||| || ||||||||||||||||||||||||||    
T  39760109 aatattccgtcgttttaacatatcttctttcga 39760077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17671647 - 17671714
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  17671647 gttttcccaatctcttgaacaaaatagaacatgctcttttcctacagcaaatctttataatgctttgg 17671714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 51965792 - 51965725
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| |||||||||||||||||||||    
T  51965792 gttttcctaatctcttgaacaaaatagaacatgttcttttgctacaacagatctttataatgctttgg 51965725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 17672315 - 17672372
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  17672315 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 17672372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 44407219 - 44407276
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  44407219 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 44407276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 13662465 - 13662398
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||| |||||||||||||  |||| |||||||| ||||||||||||||||||    
T  13662465 gttttcctaatctcttgaaccaaatagaacatgctattttcctacagcaaatctttataatgctttgg 13662398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 28565775 - 28565708
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||| ||||||||||||| ||||| |||||||| |||||||||||| |||||    
T  28565775 gttttcctaatctcttgaaccaaatagaacatgctcttttcctacagcaaatctttataatgatttgg 28565708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 44406551 - 44406618
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  ||||| |||||| ||||||||||||||||||||    
T  44406551 gttttcctaatctcttgaacaaaataaaacatgatcttttcctacagtagatctttataatgctttgg 44406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 50561232 - 50561299
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || ||||||||||||||||||    
T  50561232 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaatctttataatgctttgg 50561299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 52310025 - 52310092
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||||||||| || |||||||||||| |||||    
T  52310025 gttttcctaatctcttgaacaaaatagaacatgttctttttctacaacaaatctttataatgttttgg 52310092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 10694193 - 10694136
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  10694193 ccatacgtattttatgatgaatcacaatgtttcgtcgttttaacatcttttctttcga 10694136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 47136137 - 47136194
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  47136137 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 47136194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 12245286 - 12245230
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  12245286 catacatattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 12245230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 16031000 - 16030944
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||    
T  16031000 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttatttcga 16030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 41829465 - 41829421
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaaca 138  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  41829465 ccatacatattttatgatgaatcataatgttccgtcgttttaaca 41829421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 52310698 - 52310754
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  52310698 catacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 52310754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 18815055 - 18815110
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||    
T  18815055 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttc 18815110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 28631503 - 28631570
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||||||||||||| |||| ||||| | ||| || ||||||||||||||||||    
T  28631503 gttttcctaatctcttgaacaaaatagaatatgctcttttcccacatcaaatctttataatgctttgg 28631570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 31620525 - 31620580
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  31620525 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctcttctttc 31620580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 36682902 - 36682957
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||| | |||||||||||||| |||||||||    
T  36682902 ccatacatattttatgatgaatcacaatgctccgtcgttttaacatctcttctttc 36682957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 38845307 - 38845240
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| | |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  38845307 gttttcctaatatcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 38845240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 47135586 - 47135653
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || |||||||||||| |||||    
T  47135586 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaatctttataatgttttgg 47135653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 12714669 - 12714735
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| |||||| |||||| ||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  12714669 ttttcataatctcttgaaccaaatagaacatgttcttttcctacagcaaatctttataatgctttgg 12714735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 41962350 - 41962296
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||| |||||||||    
T  41962350 catacatattttatgatgaatcacaatgttccgtcgttttagcatctcttctttc 41962296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 45004931 - 45004989
Alignment:
Q  27 aatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    ||||| |||||||||||||||||||| ||||| ||||| || |||||||||||||||||    
T  45004931 aatctcttgaacaaaatagaacatgctcttttcctacaacaaatctttataatgctttg 45004989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 5426838 - 5426895
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  5426838 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 5426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 16300905 - 16300962
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  16300905 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 16300962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 38844589 - 38844532
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| | || ||||||||| |||||||||||    
T  38844589 ccatacatattttatgatgaatcacaatgttccatcattttaacatctcttctttcga 38844532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 4891947 - 4892003
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  4891947 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 4892003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 29186540 - 29186484
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  29186540 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 29186484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 16031663 - 16031596
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| |||||||||||||||||||  ||||| |||||||| |||| ||||||| |||||    
T  16031663 gttttcccaatctcttgaacaaaatagaacatgttcttttcctacagcaaatctctataatgttttgg 16031596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 34688423 - 34688478
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| ||||||||||| || | |||||||    
T  34688423 ccatacatattttatgatgaatcacaatgttccgtcgttttaatatctattctttc 34688478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 48341179 - 48341234
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||| |||||||||    
T  48341179 ccatacatattttatgatgaatcacaatattttatcgttttaacatctcttctttc 48341234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 34692952 - 34693006
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || | |||||||    
T  34692952 catacatattttatgatgaatcacaatgttccgtcgttttaatatctattctttc 34693006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 36681442 - 36681500
Alignment:
Q  27 aatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    ||||| |||||||||||||||||||  ||||| ||||| || |||||||||||||||||    
T  36681442 aatctcttgaacaaaatagaacatgttcttttcctacaacaaatctttataatgctttg 36681500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 52521031 - 52520977
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||| | |||||||    
T  52521031 catacgtattttatgatgaatcacaatgttccgtcgttttaacatctattctttc 52520977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 45005635 - 45005688
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||| |||| | | |||||||||||| |||||||||    
T  45005635 atacatattttatgatgaatcacaatgctccatcgttttaacatctcttctttc 45005688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 33361550 - 33361606
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||| |||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  33361550 cataaatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 33361606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 12245892 - 12245833
Alignment:
Q  27 aatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| ||||| |||||||||||||| ||||| || || || ||||||||||||||||||    
T  12245892 aatctcttgaataaaatagaacatgctcttttcctccaacaaatctttataatgctttgg 12245833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 50561910 - 50561955
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    ||||| |||||||||||||||||| |||||| | ||||||||||||    
T  50561910 ccatatatattttatgatgaatcacaatgttccatcgttttaacat 50561955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15317440 - 15317484
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctaca 64  Q
    ||||| |||||| |||||||||||||||||||| ||||| |||||    
T  15317440 ttttcataatctcttgaacaaaatagaacatgctcttttcctaca 15317484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 5e-64; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 6300677 - 6300545
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6300677 gttttcataatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 6300578  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  6300577 aatgttccgtcgttttaacatatcttctttcga 6300545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 37029765 - 37029897
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  37029765 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagcccatatatattttatgatgaatcat 37029864  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  37029865 aatgttccgtcgttttaacatatcttctttcga 37029897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 44940370 - 44940501
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcata 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  44940370 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaatcata 44940469  T
Q  120 atgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||| ||||||||||||||||||||||||||    
T  44940470 atgttccgtcgttttaacatatcttctttcga 44940501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 23966580 - 23966448
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||| ||    
T  23966580 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgaagaattat 23966481  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  23966480 aatgttccgtcgttttaacatatcttctttcga 23966448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 42060855 - 42060723
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  42060855 gttttcctaatcttttgaacaaaatagaacatgccctttttctacggcagatctttataatgctttggagtcagcccatacatattttatgatgaatcat 42060756  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  42060755 aatgttccgtcgttttaacatatcttctttcga 42060723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 12250259 - 12250192
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  12250259 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacatcaaatctttataatgctttgg 12250192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 30826963 - 30827018
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  30826963 ccatacatattttatgatgaatcacaatgtttcgtcgttttaacatctcttctttc 30827018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 33423678 - 33423619
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  33423678 cagtccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 33423619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 39444948 - 39445015
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  39444948 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacatcaaatctttataatgctttgg 39445015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 41977386 - 41977453
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||   ||||||||||||| ||||||||||||||||||    
T  41977386 gttttcctaatctcttgaacaaaatagaacatgttatttttctacagcaaatctttataatgctttgg 41977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 42785741 - 42785796
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  42785741 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatatcttctttc 42785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 7015746 - 7015802
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  7015746 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 7015802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 9761840 - 9761895
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||    
T  9761840 ccatacatattttatgatgaatcacaatgtttcgtcgttctaacatctcttctttc 9761895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 14078245 - 14078190
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  14078245 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 14078190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 22333181 - 22333114
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  22333181 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 22333114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 23522717 - 23522650
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  23522717 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 23522650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 38993610 - 38993677
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  38993610 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacatcaaatctttataatgctttgg 38993677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 41156566 - 41156633
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || ||||||||||||||||||    
T  41156566 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaatctttataatgctttgg 41156633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 44382861 - 44382794
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || ||||||||||||||||||    
T  44382861 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaatctttataatgctttgg 44382794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 44599629 - 44599696
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  44599629 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacatcaaatctttataatgctttgg 44599696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 19394954 - 19394900
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  19394954 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttcttt 19394900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 45291875 - 45291821
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  45291875 tacatattttatgatgaatcacaatgttccgtcgttttaacgtatcttctttcga 45291821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 41629472 - 41629529
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  41629472 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 41629529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 22332116 - 22332064
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  22332116 tacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 22332064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 38994281 - 38994337
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  38994281 catacatattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 38994337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 44600297 - 44600353
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  44600297 catacatattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 44600353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 5836166 - 5836221
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| |||||||||    
T  5836166 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttctttc 5836221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 6477553 - 6477486
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||  | ||||||||||||||||||    
T  6477553 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacaataaatctttataatgctttgg 6477486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 12760825 - 12760880
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  12760825 atacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 12760880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 19248035 - 19248102
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| ||| |||||||| |||||    
T  19248035 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacagcaaatcgttataatgttttgg 19248102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 19321219 - 19321286
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| ||| |||||||| |||||    
T  19321219 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacagcaaatcgttataatgttttgg 19321286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 23626404 - 23626337
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| |||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  23626404 gttttccaaatctcttgaacaaaatagaacatgctcttttcccacatcaaatctttataatgctttgg 23626337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 36597427 - 36597372
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| |||||||||    
T  36597427 ccatacatattttatgatgcatcacaatgttccgtcgttttaacatctcttctttc 36597372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 19248726 - 19248780
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||    
T  19248726 tacatattttatgatgaatcacaatgttccgtcgttttaacatctcttccttcga 19248780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 19321910 - 19321964
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||| |||||| |||||||||||||| ||||| |||||    
T  19321910 tacatattttatgatgaatcacaatgttccgtcgttttaacatctcttccttcga 19321964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 23522051 - 23521997
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||    
T  23522051 catacatattttatgatgaatcacaatgttccgtcattttaacatctcttctttc 23521997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 4465884 - 4465827
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  4465884 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 4465827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 7389826 - 7389883
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  7389826 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 7389883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 41978100 - 41978157
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| || ||| |||||||||||||| | |||||||||    
T  41978100 ccatacatattttatgatgaatcacaacgttccgtcgttttaacatcttttctttcga 41978157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 44382188 - 44382131
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||||||||||| || | |||||||||    
T  44382188 ccatacatattttatgatgaatcacaatgttccgtcgttttaatatcttttctttcga 44382131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 25615919 - 25615863
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||||| | |||||||||| | |||||||||    
T  25615919 catacatattttatgatgaatcacaatgtttcattgttttaacatcttttctttcga 25615863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 12760402 - 12760469
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  ||||| ||||| || ||||||| ||||||||||    
T  12760402 gttttcctaatctcttgaacaaaataaaacatgttcttttcctacaacaaatctttacaatgctttgg 12760469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 22946866 - 22946807
Alignment:
Q  27 aatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| ||||| |||||||||||||| ||||| || ||||| ||||||||||||||||||    
T  22946866 aatctcttgaataaaatagaacatgctcttttcctccagcaaatctttataatgctttgg 22946807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 27273804 - 27273859
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||| ||||||| |||||||||| |||||| |||||||||||||| |||||||||    
T  27273804 ccatatatattttttgatgaatcacaatgttccgtcgttttaacatctcttctttc 27273859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 38962096 - 38962163
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| || ||| | |||||||||||| |||||    
T  38962096 gttttcctaatctcttgaacaaaataaaacatgctcttttcctgcagtaaatctttataatgatttgg 38962163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 38992440 - 38992507
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| || ||| | |||||||||||| |||||    
T  38992440 gttttcctaatctcttgaacaaaataaaacatgctcttttcctgcagtaaatctttataatgatttgg 38992507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 39204558 - 39204625
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||| ||| ||||| ||||| || ||||| |||||| |||||    
T  39204558 gttttcctaatctcttgaacaaaatagaacgtgctcttttcctacatcaaatcttcataatgttttgg 39204625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 42810997 - 42810930
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||  |||||||||||| ||||||| ||||| |||||  | ||||||||||||||||||    
T  42810997 gttttcctaatcccttgaacaaaataaaacatgctcttttcctacattaaatctttataatgctttgg 42810930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 22946193 - 22946140
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||| |||||||||||||||||| |||||| |||||||||||||| ||| ||||    
T  22946193 catatatattttatgatgaatcacaatgttccgtcgttttaacatctctacttt 22946140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 29433968 - 29434033
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| ||||||||||||||||||||  ||||  |||| || || |||||||||||||||    
T  29433968 tttcctaatctcttgaacaaaatagaacatgctattttcttacaacaaatttttataatgctttgg 29434033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 41533247 - 41533190
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||   ||||||||||||| | |||||||||    
T  41533247 ccatacatattttatgatgaatcacaatgtcctgtcgttttaacatcttttctttcga 41533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 25620193 - 25620137
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||| ||||||||| |||||| ||| |||||||||| | |||||||||    
T  25620193 catacatattttaagatgaatcacaatgttccgttgttttaacatcttttctttcga 25620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 41628818 - 41628885
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||   |||||| |||| | |||||||||||| |||||    
T  41628818 gttttcctaatctattgaacaaaataaaacatgttgtttttcaacagtaaatctttataatgttttgg 41628885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 38962782 - 38962831
Alignment:
Q  100 atattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||| ||| || ||||||||||||||  ||||||||    
T  38962782 atattttatgatgaatcacaatattccgtcgttttaacatcacttctttc 38962831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 41157180 - 41157225
Alignment:
Q  106 tatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||| |||||| |||||||||||||| | |||||||||    
T  41157180 tatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 41157225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 3751038 - 3751102
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgcccttttt-ctacagcagatctttataatgct 82  Q
    ||||| ||||||| |||||||||||||||||||   ||||| || ||||| ||||||||||||||    
T  3751038 gtttttctaatctcttgaacaaaatagaacatgttttttttccttcagcaaatctttataatgct 3751102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 25345138 - 25345194
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcg 150  Q
    ||||||||||||||||||||| || |||||| |||  ||||||||| | ||||||||    
T  25345138 ccatacatattttatgatgaaccacaatgttccgtttttttaacatcttttctttcg 25345194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 15520918 - 15521050
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  15520918 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagcccatatatattttatgatgaatcat 15521017  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  15521018 aatgttccgtcgttttaacatatcttctttcga 15521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 740497 - 740365
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  740497 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcatatctttataatgctttggaatcaacccatacatattttatgatgaatcat 740398  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  740397 aatgttccgtcgttttaacatatcttctttcga 740365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 15642478 - 15642423
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  15642478 ccatacatattttatgatgaatcataatgttccgtcgttttaacatctcttctttc 15642423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 26870376 - 26870309
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  26870376 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacatcaaatctttataatgctttgg 26870309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 38008046 - 38008113
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||    
T  38008046 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagcaaatctttataatgctttgg 38008113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 21353891 - 21353945
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21353891 catacatattttatgatgaatcacaatgtttcgtcgttttaacatctcttctttc 21353945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 28134821 - 28134764
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  28134821 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 28134764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 38009134 - 38009191
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  38009134 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 7643223 - 7643167
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  7643223 catacatattttatgatgaattacaatgttccgtcgttttaacatatcttctttcga 7643167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 17700048 - 17700104
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  17700048 catacatattttatgatgaatcataatgttccgtcgttttaacatctattctttcga 17700104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 23479749 - 23479804
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  23479749 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 23479804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 41983647 - 41983592
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  41983647 ccatacatattttatgatgaagcacaatgtttcgtcgttttaacatctcttctttc 41983592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 53343280 - 53343335
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  53343280 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 53343335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 54331185 - 54331130
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  54331185 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 54331130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 2777149 - 2777203
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  2777149 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 2777203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 17740243 - 17740309
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||| ||||||||||||||| |||  ||||| |||||||| ||||||||||||||||||    
T  17740243 ttttcctaatctcttgaacaaaatagaatatgttcttttcctacagcaaatctttataatgctttgg 17740309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 34056004 - 34055950
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  34056004 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 34055950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 17740916 - 17740973
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  17740916 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 17740973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 19830816 - 19830759
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||    
T  19830816 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcatctttcga 19830759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 33502420 - 33502363
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||||    
T  33502420 ccatacatattttatgatgaatcacaatgttccgtcattttaacatctcttctttcga 33502363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 47556845 - 47556784
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  47556845 cagttcatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 47556784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 7643879 - 7643815
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctt 83  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||| || |||||||||||||||    
T  7643879 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctt 7643815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 13628254 - 13628322
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgc-cctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| | ||||||||||| | ||||||||||||||||||    
T  13628254 gttttcctaatctcttgaacaaaataaaacatgctcttttttctacagtaaatctttataatgctttgg 13628322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 2776483 - 2776546
Alignment:
Q  23 tcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  2776483 tcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 2776546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 3839452 - 3839385
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||| |||| || |||||||||||||||    
T  3839452 gttttcctaatctcttgaacaaaataaaacatgctcttttcctatagcaaatttttataatgctttgg 3839385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 5271721 - 5271662
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||| |||||||||    
T  5271721 cagtccatacatattttatgatgaatttcaatgttccgtcgttttaacatctcttctttc 5271662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 8531018 - 8531085
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || |||||||||||| |||||    
T  8531018 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaatctttataatgttttgg 8531085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 19831484 - 19831417
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||| | |||||||||||| |||||    
T  19831484 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgttttgg 19831417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21353286 - 21353353
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||| | | ||||||||||||||||||    
T  21353286 gttttcctaatctattgaacaaaataaaacatgctcttttcctacggtaaatctttataatgctttgg 21353353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 22116134 - 22116071
Alignment:
Q  23 tcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  22116134 tcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 22116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 28973264 - 28973331
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| |||||  |||| || ||||||||||||||||||    
T  28973264 gttttcctaatctcttgaacaaaataaaacatgctcttttcatacaacaaatctttataatgctttgg 28973331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 41984321 - 41984254
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||| |||||| |||||||| ||||||||||| |||||  ||||||| ||||||||||||||||||    
T  41984321 gttttcataatctcttgaacaagatagaacatgctcttttcgtacagcaaatctttataatgctttgg 41984254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 22115469 - 22115415
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  22115469 catacatattttatgatgaatcacaatgttctgtcgttttaacatctcttctttc 22115415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 36514758 - 36514704
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| |||||||||    
T  36514758 catacatattttatgatgaatcacaatattccgtcgttttaacatctcttctttc 36514704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 2116703 - 2116760
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  2116703 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 2116760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 37701017 - 37700960
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||| | |||||| | |||||||||||| |||||||||||    
T  37701017 ccatacatattttatgatgaattacaatgttccatcgttttaacatctcttctttcga 37700960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 40623021 - 40623078
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| | |||||||||    
T  40623021 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatcttttctttcga 40623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 14828953 - 14828901
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttct 146  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| ||||||    
T  14828953 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttct 14828901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 39714959 - 39714903
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  39714959 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 39714903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 40622349 - 40622417
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaa-catgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| || ||||  ||||| |||||||| ||||||||||||||||||    
T  40622349 gttttcctaatctcttgaacaaaataaaaacatgttcttttcctacagcaaatctttataatgctttgg 40622417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 52800872 - 52800928
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  52800872 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 52800928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 19109176 - 19109121
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||  ||||||||    
T  19109176 ccatacatattttatgatgaatcacaatgttccgtcgttttagcatcacttctttc 19109121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 28135152 - 28135085
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| ||||||| |||||||||||| ||||||| ||||| |||||| | |||||||||||| |||||    
T  28135152 gtttttctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgttttgg 28135085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 33503084 - 33503017
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||   ||||| ||||| | ||||||||||||||||||    
T  33503084 gttttcctaatctcttgaacaaaataaaacatgttgtttttatacagtaaatctttataatgctttgg 33503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 36857289 - 36857356
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||| ||||||| |||||||  |||| |||||| | ||||||||||||||||||    
T  36857289 gttttcctaatctcttgagcaaaataaaacatgctattttcctacagtaaatctttataatgctttgg 36857356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 39742414 - 39742359
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| | |||||||    
T  39742414 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatcttttctttc 39742359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 39742833 - 39742766
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| | |||||||||||| ||||||| ||||| |||| | | ||||||||||||||||||    
T  39742833 gttttcctaatatattgaacaaaataaaacatgctcttttcctacggtaaatctttataatgctttgg 39742766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 53342611 - 53342678
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| || |||| ||||| |||||  | ||||||||||||||||||    
T  53342611 gttttcctaatctcttgaacaaaataaaatatgctcttttcctacattaaatctttataatgctttgg 53342678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 55998130 - 55998076
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| | ||||||||| || |||||||||    
T  55998130 catacatattttatgatgaatcacaatgttccttcgttttaatatctcttctttc 55998076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 46104776 - 46104833
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||| |||||||| |||||| ||| |||||||||| | |||||||||    
T  46104776 ccatacatattttataatgaatcacaatgttccgttgttttaacatcttttctttcga 46104833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 12682217 - 12682161
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||| ||||| | |||||||||    
T  12682217 catacatattttatgatgaatcacaatgttccgttgtttaaacatcttttctttcga 12682161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 28973935 - 28973991
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| ||||||  ||| |||||| || |||||||||||    
T  28973935 catacatattttatgatgaatcacaatgttctgtcattttaatatctcttctttcga 28973991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17699379 - 17699446
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||| ||||| ||||||| |||||  ||| | | ||||||||||||||||||    
T  17699379 gttttcctaatctcttgaacgaaataaaacatgctcttttcttacggtaaatctttataatgctttgg 17699446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 35495017 - 35494966
Alignment:
Q  100 atattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||| |||||||||| |||||| |||||||||||||||| | |||||||    
T  35495017 atattttctgatgaatcacaatgttccgtcgttttaacatatttactttcga 35494966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 35495630 - 35495563
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  ||||| |||| | | ||||||||||||| ||||    
T  35495630 gttttcctaatctcttgaacaaaataaaacatgttcttttcctacggtaaatctttataatgcgttgg 35495563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 36857930 - 36857985
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||| ||||| |||||| ||| |||||||| | |||||||||||    
T  36857930 atacatattttatgataaatcacaatgttccgttgttttaacgtttcttctttcga 36857985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 37701686 - 37701619
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||  ||||||  ||||| |||||  | ||||||||||||||||||    
T  37701686 gttttcctaatctcttgaacaaaattaaacatgttcttttcctacaataaatctttataatgctttgg 37701619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 197
Target Start/End: Complemental strand, 33486420 - 33486391
Alignment:
Q  168 acgttattcgcacgggtttgtaactagttt 197  Q
    ||||||||||||||||||||||||||||||    
T  33486420 acgttattcgcacgggtttgtaactagttt 33486391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 1944694 - 1944738
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctac 63  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  1944694 gtttttctaatctcttgaacaaaatagaacatgctcttttcctac 1944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 13628926 - 13628978
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||| ||||||||||||||| |||| | |||||||||||||  |||||||||    
T  13628926 tacattttttatgatgaatcacaatgatccgtcgttttaacagctcttctttc 13628978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 14829599 - 14829531
Alignment:
Q  18 agttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||| ||||  |||||| |||||||  |||| |||||| | ||||||| ||||||||||    
T  14829599 agttttcctaatctcttgagaaaaataaaacatgctattttcctacagtaaatctttacaatgctttgg 14829531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 39796545 - 39796413
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39796545 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagcccatacatattttatgatgaatcat 39796446  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| |||||||||||||||| |||||||||    
T  39796445 aatgttccgtcgttttaacatattttctttcga 39796413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 5252446 - 5252314
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  5252446 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaatcat 5252347  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| |||||||||||||||||||| |||||    
T  5252346 aatgttccgtcgttttaacatatcttccttcga 5252314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 52462330 - 52462275
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52462330 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatctcttctttc 52462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 49113903 - 49113960
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  49113903 ccatacatattttatgatgaatcacaatgtttcgtcgttttaacatctcttctttcga 49113960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 11598035 - 11597968
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| ||||||||||||||||||    
T  11598035 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacagcaaatctttataatgctttgg 11597968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 21698995 - 21698936
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  21698995 cagtccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 21698936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 31368447 - 31368388
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  31368447 cagtccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 31368388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 19353720 - 19353776
Alignment:
Q  93 tccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  19353720 tccatacatattttatgatgaatcacaatgtttcatcgttttaacatctcttctttc 19353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 16496072 - 16496139
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||| |||||||||||||  |||| |||||||| ||||||||||||||||||    
T  16496072 gttttcctaatctcttgaaccaaatagaacatgctattttcctacagcaaatctttataatgctttgg 16496139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 18741632 - 18741577
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  18741632 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 18741577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 50770674 - 50770619
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  50770674 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 50770619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 50771319 - 50771252
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  50771319 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 50771252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 51248531 - 51248598
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||||||||||||||| ||||||| ||||| ||||||   ||||||||||||||||||    
T  51248531 gttttcctaatcttttgaacaaaataaaacatgctcttttcctacagtgaatctttataatgctttgg 51248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 52463005 - 52462938
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||| ||||||||||| ||||| ||||| || ||||||||||||||||||    
T  52463005 gttttcctaatctcttgaacaacatagaacatgctcttttcctacaacaaatctttataatgctttgg 52462938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 54934657 - 54934715
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| ||||||||    
T  54934657 cagtccatacatattttatgatgaatcacaatgttccttcgttttaacatctcttcttt 54934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 16341837 - 16341902
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgcttt 84  Q
    ||||||||||||| |||||||||||| |||||||  |||| |||||||| ||||||||||||||||    
T  16341837 gttttcctaatctcttgaacaaaataaaacatgctattttcctacagcaaatctttataatgcttt 16341902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 23195044 - 23195105
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||| || |||||||||||    
T  23195044 cagtccatacatattttatgatgaatcacaatgttctgtcgttttaaaatctcttctttcga 23195105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 40824070 - 40824013
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  40824070 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 40824013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 39093181 - 39093237
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  39093181 catacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 39093237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 52842438 - 52842494
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  52842438 catacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 52842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 11383294 - 11383361
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || | ||||||||||||||||    
T  11383294 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaagctttataatgctttgg 11383361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 40827107 - 40827040
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||||| || || |||||||||||||||    
T  40827107 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaacaaatgtttataatgctttgg 40827040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 48521094 - 48521027
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||||||||||||| |||  ||||| ||||| || ||||||||||||||||||    
T  48521094 gttttcctaatctcttgaacaaaatagaagatgttcttttcctacaacaaatctttataatgctttgg 48521027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 48988911 - 48988966
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||| |||||| ||||||||||||||  ||||||||||    
T  48988911 atacatattttatgatgaatcacaatgttccgtcgttttaacatcacttctttcga 48988966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 49113249 - 49113312
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctt 83  Q
    |||||||||||| |||||||||||| ||||||| ||||| |||||| | |||||||||||||||    
T  49113249 ttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctt 49113312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 54513647 - 54513698
Alignment:
Q  100 atattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  54513647 atattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 54513698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 6103547 - 6103493
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| | |||||||    
T  6103547 catacatattttatgatgaatcataatgttctgtcgttttaacatcttttctttc 6103493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 32756362 - 32756416
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||| ||||||||    
T  32756362 ccatacatattttatgatgaatcacaatgttccgtcgttttaccatctcttcttt 32756416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 35087279 - 35087225
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||| ||||||||    
T  35087279 ccatacatattttacgatgaatcacaatgttccgtcgttttaacatctcttcttt 35087225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 8243358 - 8243415
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  8243358 ccatacatattttatgatgaatcacaatgttccgttgttttaacatctattctttcga 8243415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 11597421 - 11597368
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||| |||||||||||||||||| || | |||||||    
T  11597421 atacatattttatgatgaatcacaatgtttcgtcgttttaatatcttttctttc 11597368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 16342504 - 16342545
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaa 136  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  16342504 catacatattttatgatgaatcataatgttccgtcgttttaa 16342545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 50741536 - 50741601
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||||| || |||||||||||| |||||    
T  50741536 tttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgttttgg 50741601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 51249154 - 51249211
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| | |||||||| ||| |||||||||||    
T  51249154 ccatacatattttatgatgaatcacaatgttccatcgttttagcatctcttctttcga 51249211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 54648293 - 54648240
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||| |||||| | |||||||||||| |||||||||    
T  54648293 atacatattttatgatgaatcacaatgttccatcgttttaacatctcttctttc 54648240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 26777332 - 26777276
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  26777332 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 26777276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 52852858 - 52852802
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||| |||||||||||| || | | ||||||||||||||||||||||    
T  52852858 catacatattttataatgaatcataatattccattgttttaacatatcttctttcga 52852802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 19406741 - 19406691
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatctt 144  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||| ||||    
T  19406741 ccatatatattttatgatgaatcacaatgtttcatcgttttaacatctctt 19406691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 32755699 - 32755765
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||| ||||| |||||| |||||||  |||| |||||| | ||||||||||||||||||    
T  32755699 ttttcctaatctcttgaataaaataaaacatgctattttcctacagtaaatctttataatgctttgg 32755765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 54793037 - 54792971
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    ||||||||||||| |||||| ||||||||||||  ||||| |||| | | |||||||||||||||||    
T  54793037 gttttcctaatctcttgaaccaaatagaacatgttcttttcctacggtaaatctttataatgctttg 54792971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 4138187 - 4138142
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||    
T  4138187 ccatacatattttatgatgaatcacaatgttccgttgttttaacat 4138142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 48520440 - 48520383
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||| ||||| ||||||  ||||||||||||| | |||||||||    
T  48520440 ccatacatattttatgatcaatcacaatgttctgtcgttttaacatcttttctttcga 48520383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 48976866 - 48976933
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| ||||| | |||||||||||| ||||||| ||||| |||||| | || |||||||||||||||    
T  48976866 gtttttctaatatattgaacaaaataaaacatgctcttttcctacagtaaatttttataatgctttgg 48976933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 55294851 - 55294785
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  ||||| ||||| || |||||||| |||||||||    
T  55294851 gttttcctaatctcttgaacaaaataaaacatgttcttttcctacaacaaatctttat-atgctttgg 55294785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 50742223 - 50742277
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||| |||||| |||| ||||| |||  |||||||    
T  50742223 ccatacatattttatgatgaatcacaatgttccgtcattttagcatcacttcttt 50742277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 55294181 - 55294124
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||| ||||||||||||||||||| ||| || ||||||||||| || | |||||||||    
T  55294181 ccatgcatattttatgatgaatcacaatattccgtcgttttaaaatcttttctttcga 55294124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 1e-61; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 19 - 151
Target Start/End: Original strand, 28502369 - 28502501
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  28502369 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagcccatacatattttatgatgaatcat 28502468  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||| || ||||||||||||||||||||||||||    
T  28502469 aatattccgtcgttttaacatatcttctttcga 28502501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 6342917 - 6342787
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6342917 gttttcctaatcttttgaacaaaatagaacattccctttttctacagcagatctttataatgctttggaaccagcccatacatattttatgatgaatcat 6342818  T
Q  119 aatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||| ||||||||||||||||||||||||    
T  6342817 aatgttccgtcgttttaacatatcttctttc 6342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 1993142 - 1993010
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||    
T  1993142 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaattat 1993043  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  1993042 aatgttccgtcgttttaacatatcttctttcga 1993010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 14323401 - 14323269
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  14323401 gttttcataatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaatcat 14323302  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  14323301 aatgttccgtcgttttaacatatcttctttcga 14323269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 28380077 - 28380010
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  28380077 gttttcccaatctcttgaacaaaatagaacatgctcttttactacagcaaatctttataatgctttgg 28380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 33663868 - 33663801
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||    
T  33663868 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagcaaatctttataatgctttgg 33663801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 36633160 - 36633093
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  36633160 gttttcctaatctcttgaataaaatagaacatgctctttatctacagcaaatctttataatgctttgg 36633093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 33663172 - 33663115
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  33663172 ccatacatattttatgatgaatcacaatgttccgtcattttaacatatcttctttcga 33663115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 45399678 - 45399735
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  45399678 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 45399735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 35285698 - 35285642
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  35285698 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 35285642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 16723778 - 16723723
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  16723778 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 16723723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17091995 - 17092062
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| || | ||||||||||||||||    
T  17091995 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacatcaaagctttataatgctttgg 17092062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 26822483 - 26822538
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  26822483 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 26822538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 26827718 - 26827785
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||| |||||    
T  26827718 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagcaaatctttataatgttttgg 26827785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 36632455 - 36632396
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  36632455 cagtccatatatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 36632396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 42886266 - 42886321
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  42886266 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 42886321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 5253221 - 5253275
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  5253221 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 5253275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 18137828 - 18137882
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  18137828 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 18137882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 27364256 - 27364202
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  27364256 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 27364202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 11448621 - 11448678
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||    
T  11448621 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttttttcga 11448678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 18092136 - 18092079
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  18092136 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 18092079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 19167264 - 19167207
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||    
T  19167264 ccatacatattttataatgaatcacaatgttccgtcgttttaacatctcttctttcga 19167207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 45398974 - 45399027
Alignment:
Q  33 ttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  45398974 ttgaacaaaatagaacatgctcttttactacagcaaatctttataatgctttgg 45399027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 11707501 - 11707557
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  11707501 catacatattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 11707557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17025810 - 17025877
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||| |||| |||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  17025810 gttttcctnatctcttgaacaaaatagaacatgctcttttcccacatcaaatctttataatgctttgg 17025877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 26828386 - 26828442
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  26828386 catacatattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 26828442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 33908118 - 33908174
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  33908118 catacatattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 33908174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17037487 - 17037554
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||| |||| |||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  17037487 gttttcctgatctcttgaacaaaatagaacatgctcttttcccacatcaaatctttataatgctttgg 17037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 21098552 - 21098607
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| |||||||||    
T  21098552 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttctttc 21098607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 33907446 - 33907513
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| || ||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  33907446 gttttcctaatctcttaaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 33907513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 35286414 - 35286347
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| ||||| |||||||||||||| ||||| || ||||| ||||||||||||||||||    
T  35286414 gttttcccaatctcttgaataaaatagaacatgctcttttcctccagcaaatctttataatgctttgg 35286347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 45204410 - 45204355
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  45204410 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctcttctttc 45204355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 19126114 - 19126060
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||    
T  19126114 catacatattttatgatgaatcacaatgttccgtcattttaacatctcttctttc 19126060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 1514387 - 1514330
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||| | |||||||||    
T  1514387 ccatacatatttcatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 1514330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 10048432 - 10048375
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  10048432 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 10048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 19167715 - 19167654
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatg 80  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||  ||||||||||||||    
T  19167715 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacattagatctttataatg 19167654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 28608456 - 28608513
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  28608456 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 28608513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 1515064 - 1514996
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttt-tctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  |||||  |||||||| |||||||||||| |||||    
T  1515064 gttttcctaatctcttgaacaaaatagaacatgttcttttccctacagcaaatctttataatgttttgg 1514996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 4291088 - 4291032
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  4291088 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 4291032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 9544054 - 9543998
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  9544054 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 9543998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 4812423 - 4812474
Alignment:
Q  100 atattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||| |||||| ||||||||||| || |||||||||||    
T  4812423 atattttatgatgaatcacaatgttccgtcgttttaatatctcttctttcga 4812474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 11706831 - 11706898
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| ||||||| |||||||||||| ||||||| |||||  ||||||| |||||||||||| |||||    
T  11706831 gttttactaatctcttgaacaaaataaaacatgctcttttcatacagcaaatctttataatgttttgg 11706898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 18092796 - 18092729
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  ||||| ||||| || |||||||||||| |||||    
T  18092796 gttttcctaatctcttgaacaaaataaaacatgttcttttcctacaacaaatctttataatgatttgg 18092729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 42885594 - 42885661
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||| |||||| |||||||||||| ||||||| ||||| |||||| | ||||||| ||||||||||    
T  42885594 gttttcataatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttacaatgctttgg 42885661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 30570624 - 30570559
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgc-cctttttctacagcagatctttataatgctt 83  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||||||| | |||||||||||||||    
T  30570624 gttttcctaatctcttgaacaaaataatacatgctcttttttctacagtaaatctttataatgctt 30570559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 30572504 - 30572439
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgc-cctttttctacagcagatctttataatgctt 83  Q
    ||||||||||||| ||||||||||||  |||||| | ||||||||||| | |||||||||||||||    
T  30572504 gttttcctaatctcttgaacaaaataatacatgctcttttttctacagtaaatctttataatgctt 30572439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 26821838 - 26821905
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||  |||||| |||||||  |||| |||||| | ||||||||||||||||||    
T  26821838 gttttcctaatctcttgagaaaaataaaacatgctattttcctacagtaaatctttataatgctttgg 26821905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 4811782 - 4811832
Alignment:
Q  36 aacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  4811782 aacaaaatagaacatgctcttttcctacaacaaatctttataacgctttgg 4811832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 45205092 - 45205026
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    |||||| |||||| |||||||||||| |||| || ||||| ||||| || |||||||| ||||||||    
T  45205092 gttttcataatctcttgaacaaaataaaacaagctcttttcctacaacaaatctttatgatgctttg 45205026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 10821278 - 10821246
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatg 51  Q
    ||||||||||||| |||||||||||||||||||    
T  10821278 gttttcctaatctcttgaacaaaatagaacatg 10821246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 3e-59; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 47573529 - 47573397
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||    
T  47573529 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccaacccatacatattttatgatgaattat 47573430  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  47573429 aatgttccgtcgttttaacatatcttctttcga 47573397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 6911551 - 6911419
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| ||    
T  6911551 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgttttggaaccaacccatacatattttatgatgaattat 6911452  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  6911451 aatgttccgtcgttttaacatatcttctttcga 6911419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 33031712 - 33031767
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33031712 ccatacatattttatgatgaatcataatgttccgtcgttttaacatatcttctttc 33031767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 42996635 - 42996702
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  42996635 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacatcaaatctttataatgctttgg 42996702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 19521991 - 19522048
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  19521991 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 19522048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 4481463 - 4481396
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  4481463 gttttcctaatctcttgaacaaaatagaacatgctcttttccaacaacaaatctttataatgctttgg 4481396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 8925341 - 8925286
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  8925341 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 8925286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17469919 - 17469986
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  17469919 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 17469986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 17583295 - 17583228
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  17583295 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 17583228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 33638752 - 33638685
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| | |||||| ||||||||||||||||||    
T  33638752 gttttcctaatctcttgaacaaaatagaacatgttcttttcccacagcaaatctttataatgctttgg 33638685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 38434626 - 38434559
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| | ||| || ||||||||||||||||||    
T  38434626 gttttcctaatctcttgaacaaaatagaacatgctcttttcccacatcaaatctttataatgctttgg 38434559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 42826759 - 42826704
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  42826759 atacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 42826704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 17470587 - 17470641
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  17470587 catacatattttatgatgaatcacaatgtttcatcgttttaacatctcttctttc 17470641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 17582627 - 17582573
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  17582627 catacatattttatgatgaatcacaatgtttcatcgttttaacatctcttctttc 17582573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 42918726 - 42918780
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  42918726 tacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 42918780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 17478077 - 17478142
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  17478077 tttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 17478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 17482520 - 17482585
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  17482520 tttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 17482585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 17570694 - 17570629
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  17570694 tttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 17570629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 17575137 - 17575072
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  17575137 tttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 17575072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 33638078 - 33638021
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  33638078 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 33638021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 42688409 - 42688466
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  42688409 ccatacatattttacgatgaatcacaatgttccgtcgttttaacatctcttctttcga 42688466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 49145700 - 49145639
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  49145700 cagtccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 49145639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 9149549 - 9149616
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||| | || ||||||||||||||||||    
T  9149549 gttttcctaatctcttgaacaaaatagaacatgttcttttcctataacaaatctttataatgctttgg 9149616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 11500046 - 11500113
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| || |||| ||||| |||||| | ||||||||||||||||||    
T  11500046 gttttcctaatctcttgaacaaaataaaatatgctcttttcctacagtaaatctttataatgctttgg 11500113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 19521312 - 19521379
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||| || | ||||||||||||||||||    
T  19521312 gttttcctaatctcttgaacaaaataaaacatgctcttttcctatagtaaatctttataatgctttgg 19521379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 23299127 - 23299070
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| | |||||||||    
T  23299127 ccatacatattttatgatgaatcacaatgttccgtcattttaacatcttttctttcga 23299070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 47175320 - 47175377
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| | || ||||||||| |||||||||||    
T  47175320 ccatacatattttatgatgaatcacaatgttccatcattttaacatctcttctttcga 47175377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 17170873 - 17170929
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  17170873 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 17170929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 39649387 - 39649331
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  39649387 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 39649331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 47174647 - 47174707
Alignment:
Q  26 taatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||| |||||||||||||||||| | |||||||||||| |  |||||||||||||||||    
T  47174647 taatctcttgaacaaaatagaacattctctttttctacagtaagtctttataatgctttgg 47174707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 48528197 - 48528141
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  48528197 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 48528141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 23299799 - 23299732
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||| | || ||||||||| |||||    
T  23299799 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacaggaaatatttataatgttttgg 23299732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 11500718 - 11500764
Alignment:
Q  105 ttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||    
T  11500718 ttatgatgaatcacaatgttccgtcgttttaacatctcttctttcga 11500764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 14309701 - 14309755
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||| ||||||||||||  ||||| |||||||||||||| |||||||||    
T  14309701 catacatattctatgatgaatcacgatgttccgtcgttttaacatctcttctttc 14309755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 42918023 - 42918077
Alignment:
Q  32 tttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||||||||||  ||||| ||||| || ||||||||||||||||||    
T  42918023 tttgaacaaaatagaacatgttcttttactacaacaaatctttataatgctttgg 42918077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 4848957 - 4849014
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| ||||||| || | |||||||||    
T  4848957 ccatacatattttatgatgaatcacaatgttccgttgttttaagatcttttctttcga 4849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 5963540 - 5963581
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgtttta 135  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  5963540 ccatacatattttatgatgaatcacaatgttccgtcgtttta 5963581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 42244930 - 42244865
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| |||||||||||||||||||| ||||| |||||  | || ||||||||| |||||    
T  42244930 tttcctaatctcttgaacaaaatagaacatgctcttttcctacaataaatttttataatgttttgg 42244865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 31898228 - 31898184
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||    
T  31898228 catacatattttatgatgaatcacaatgttccgttgttttaacat 31898184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 42827422 - 42827356
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| || ||||||||||||||||| ||||| ||||| || || |||||||||||||||    
T  42827422 gttttcccaatctctt-aacaaaatagaacatgctcttttcctacaacaaatttttataatgctttgg 42827356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 27734453 - 27734398
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||| ||||||||  ||||| |||||||||||||| | |||||||||    
T  27734453 ccatacatattttataatgaatca--atgttccgtcgttttaacatcttttctttcga 27734398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 33030983 - 33031049
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    ||||||||||||| |||||||| ||| | ||||| ||||| ||||| || |||||||||||| ||||    
T  33030983 gttttcctaatctcttgaacaacataaatcatgctcttttcctacaacaaatctttataatgttttg 33031049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 9150184 - 9150241
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| | ||||||  |||| | |||||||||    
T  9150184 ccatacatattttatgatgaatcacaatgttccttcgtttatacatcttttctttcga 9150241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 31295744 - 31295612
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  31295744 gttttcctaatcttttgaacaaaatagaacatgctctttttctacagcagatctttataatgctttggaaccatcccatacatattttatgatgaatcat 31295645  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| ||||||||||||||||||||||||||    
T  31295644 aatgttccgtcgttttaacatatcttctttcga 31295612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 19395505 - 19395634
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  19395505 gttttcctaatctcttgaacaaaatagaacatgctctttttctagagcagatctttataatgctttggaaccagcccatacatattttatgatgaatcac 19395604  T
Q  119 aatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||| |||||||||||||| ||||||||    
T  19395605 aatgttccgtcgttttaacatctcttcttt 19395634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 20996014 - 20995947
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  20996014 gttttcctaatctcttgaataaaatagaacatgctctttttctacagcaaatctttataatgctttgg 20995947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 41780977 - 41781044
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||    
T  41780977 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacagcaaatctttataatgctttgg 41781044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 20995298 - 20995239
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  20995298 cagtccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 20995239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 21030257 - 21030324
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||||||| ||||||||||||||| ||||| |||||| | ||||||||||||||||||    
T  21030257 gttttcctaatcttttgatcaaaatagaacatgctcttttcctacagtaaatctttataatgctttgg 21030324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 26320502 - 26320448
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  26320502 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatatcttcttt 26320448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 12419980 - 12419923
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  12419980 ccatacatattttatgatgaatcaaaatgttccgtcgttttaacatattttctttcga 12419923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 41781730 - 41781791
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||||    
T  41781730 cagtccatacatattttatgatgaatcacaatgttccgtcattttaacatctcttctttcga 41781791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 287128 - 287072
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  287128 catacatattttatgatgaatcacaatgttccgtcgttttaacatattttctttcga 287072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 10512434 - 10512367
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||| ||||||||||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  10512434 gttttcttaatcttttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 10512367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 20758095 - 20758162
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||||||    
T  20758095 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttgg 20758162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 17997386 - 17997440
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  17997386 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 17997440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 20758763 - 20758817
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  20758763 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 20758817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 10511780 - 10511723
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||    
T  10511780 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttctttcga 10511723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 33931040 - 33931097
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||||    
T  33931040 ccatacatattttatgatgaatcagaatgttccgtcattttaacatctcttctttcga 33931097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 33706171 - 33706115
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  33706171 catacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 33706115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 34373784 - 34373728
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| |||||||||||    
T  34373784 catacatattttatgatgaatcacaatattccgtcgttttaacatctcttctttcga 34373728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 38935268 - 38935324
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||  ||||||||||    
T  38935268 catacatattttatgatgaatcacaatgttccgtcgttttaacatcccttctttcga 38935324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 2195955 - 2196010
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  2195955 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatctcttctttc 2196010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 3028903 - 3028970
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||||||||||  |||||| ||||| |||||| | ||||||||||||||||||    
T  3028903 gttttcctaatctcttgaacaaaataatacatgctcttttcctacagtaaatctttataatgctttgg 3028970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 9702401 - 9702468
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||||||||||||| |||| ||||| | ||| || ||||||||||||||||||    
T  9702401 gttttcctaatctcttgaacaaaatagaatatgctcttttcccacatcaaatctttataatgctttgg 9702468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 19448811 - 19448866
Alignment:
Q  93 tccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||| ||||||||    
T  19448811 tccatacatattttatgatgaatcacaatattccgtcgttttaacatctcttcttt 19448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 30690120 - 30690179
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| |||||||||    
T  30690120 cagtccatacatattttatgatgaatcacgatgttccttcgttttaacatctcttctttc 30690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 3150674 - 3150608
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    |||||||||||||  ||||||||||| ||||||| ||||| |||||| | |||||||||||||||||    
T  3150674 gttttcctaatctcctgaacaaaataaaacatgctcttttcctacagtaaatctttataatgctttg 3150608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 3210269 - 3210203
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||| |||||||||||||||| ||| ||||| ||||| || ||||| ||||||||||||    
T  3210269 ttttcctaatctcttgaacaaaatagaacgtgctcttttcctacatcaaatcttcataatgctttgg 3210203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 7286472 - 7286526
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| |||||||||    
T  7286472 catacatattttatgatgaatcacaatattccgtcgttttaacatctcttctttc 7286526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 3150006 - 3149949
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| ||||||   |||||||||||| |||||||||||    
T  3150006 ccatacatattttatgatgaatcacaatgttaattcgttttaacatctcttctttcga 3149949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 20350073 - 20350138
Alignment:
Q  21 tttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||| |||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  20350073 tttcttaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 20350138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 27066685 - 27066746
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||| |||||||||||||||||||||| |||||| | |||||||| ||| |||||||||||    
T  27066685 cagtctatacatattttatgatgaatcacaatgttccatcgttttaccatctcttctttcga 27066746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 34374450 - 34374389
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatg 80  Q
    ||||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||    
T  34374450 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacatcaaatctttataatg 34374389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 34726796 - 34726739
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  34726796 ccatacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 34726739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 3029572 - 3029628
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| ||| || | |||||||||||| |||||||||||    
T  3029572 catacatattttatgatgaatcacaatattccttcgttttaacatttcttctttcga 3029628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 41691123 - 41691179
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  41691123 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 41691179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 4882421 - 4882488
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||| | ||||| |||||| | |||||||||||| |||||    
T  4882421 gttttcctaatctcttgaacaaaataaaacatactcttttcctacagtaaatctttataatgttttgg 4882488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 20350752 - 20350807
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||  ||||||||    
T  20350752 ccatacatattttatgatgaatcacaatgttccgtcgttttagcatcacttctttc 20350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 21030926 - 21030981
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||  || |||||||||| |||||||||    
T  21030926 ccatacatattttatgatgaatcacaatgttctgttgttttaacatctcttctttc 21030981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 27066022 - 27066089
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  ||||| |||||  | ||||||||||||||||||    
T  27066022 gttttcctaatctcttgaacaaaataaaacatgttcttttcctacaataaatctttataatgctttgg 27066089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 33706849 - 33706782
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| |||||||||||||||||||  ||||| | ||| || ||||||||||||||||||    
T  33706849 gttttccaaatctcttgaacaaaatagaacatgttcttttcccacaacaaatctttataatgctttgg 33706782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 35539989 - 35539922
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||  |||||  |||| || ||||||||||||||||||    
T  35539989 gttttcctaatctcttgaacaaaataaaacatgttcttttcttacaacaaatctttataatgctttgg 35539922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 34717437 - 34717490
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | ||||||    
T  34717437 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttcttt 34717490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 4883000 - 4883052
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||| |||||| || |||||| |||||||||||||| |||||||||    
T  4883000 tacatattttacgatgaagcacaatgttccgtcgttttaacatctcttctttc 4883052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 25696955 - 25696899
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||| ||||||||| |||||| ||| |||||||||| | |||||||||    
T  25696955 catacatattttaggatgaatcacaatgttccgttgttttaacatcttttctttcga 25696899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 30142350 - 30142406
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| ||||||  || |||||||||| | |||||||||    
T  30142350 catacatattttatgatgaatcacaatgttctgttgttttaacatcttttctttcga 30142406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 7285826 - 7285893
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||  |||||| |||||||  |||| |||||| | ||||||||||||||||||    
T  7285826 gttttcctaatctcttgagaaaaataaaacatgctattttcctacagtaaatctttataatgctttgg 7285893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 17996714 - 17996781
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| | ||||| ||||| |||||| | |||| | |||||||||||    
T  17996714 gttttcctaatctcttgaacaaaataaagcatgctcttttcctacagtaaatctatttaatgctttgg 17996781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 33929943 - 33930010
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| ||||| ||||| |||||||| ||||  ||||| || ||||| ||||||||||||||||||    
T  33929943 gttttcccaatctcttgaataaaatagaccatgttcttttcctccagcaaatctttataatgctttgg 33930010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 33610564 - 33610510
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||| |||||||||| |||||| |||||| |||||||||||||| | |||||||    
T  33610564 catacgtattttatgacgaatcacaatgttccgtcgttttaacatctattctttc 33610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 35539325 - 35539271
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||| ||| |||||| ||||||||||| || | |||||||    
T  35539325 catacatattttatgatgagtcacaatgttccgtcgttttaatatcttttctttc 35539271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 1852015 - 1851963
Alignment:
Q  34 tgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||| ||||||| ||||| |||||| | |||| |||||||||||||    
T  1852015 tgaacaaaataaaacatgctcttttcctacagtaaatctctataatgctttgg 1851963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 19448152 - 19448212
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataat 79  Q
    ||||||||||||| || ||||||||| ||||||| ||||| |||||| | || ||||||||    
T  19448152 gttttcctaatctcttaaacaaaataaaacatgctcttttcctacagtaaatttttataat 19448212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 4e-52; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 13456925 - 13456793
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttggaaccagtccatacatattttatgatgaatcat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||| ||    
T  13456925 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcatatctttataatgctttggaatcaacccatacatattttatgatgaattat 13456826  T
Q  119 aatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||| | ||||||||||||||||||||||||    
T  13456825 aatgttccatcgttttaacatatcttctttcga 13456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 4425312 - 4425369
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  4425312 ccatacatattttatgatgaatcataatgttccgtcgttttaacatctcttctttcga 4425369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 34856760 - 34856819
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  34856760 cagtccatacatattttatgatgaatcataatgttccgtagttttaacatctcttctttc 34856819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 35158805 - 35158866
Alignment:
Q  90 cagtccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  35158805 cagtccatacagattttatgatgaatcacaatgttccgtcgttttaacatattttctttcga 35158866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 18311958 - 18312025
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||| | ||| ||||||||||||||    
T  18311958 gttttcctaatcttttgaacaaaataaaacatgctcttttcctacagtaaatcattataatgctttgg 18312025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 18598420 - 18598365
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  18598420 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 18598365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 33814803 - 33814858
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  33814803 ccatacatattttatgatgaatcacaatgtttcgtcgttttatcatctcttctttc 33814858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 11932916 - 11932863
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    ||||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  11932916 catacatattttatgatgaatcacaatgttccgtcgttttaacttatcttcttt 11932863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 35041260 - 35041327
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||  | ||||||||||||||||||    
T  35041260 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacaataaatctttataatgctttgg 35041327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 2521951 - 2522005
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||    
T  2521951 catacatattttatgatgaatcacaatgttccgtcattttaacatctcttctttc 2522005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 17939690 - 17939756
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||| |||||||||||| |||||||  |||| ||||| || ||||||||||||||||||    
T  17939690 ttttcctaatctcttgaacaaaataaaacatgctattttcctacaacaaatctttataatgctttgg 17939756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 22373254 - 22373200
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| ||| || ||| ||||||||||||||||||||    
T  22373254 catacatattttatgatgaatcacaatattccgtagttttaacatatcttctttc 22373200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 33321531 - 33321465
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||| ||||||||||| |||||||  ||||| |||||||| |||||||||||| |||||    
T  33321531 ttttcctaatctcttgaacaaaattgaacatgttcttttcctacagcaaatctttataatgttttgg 33321465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 35041923 - 35041977
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| |||||||||    
T  35041923 catacatattttatgatgaatcacaatcttccgtcgttttaacatctcttctttc 35041977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 14832322 - 14832379
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  14832322 ccatatatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 14832379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 14887371 - 14887318
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| |||||||||    
T  14887371 atacatattttatgatgaatcacaatgttctgtcgttttaacatctcttctttc 14887318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 17940355 - 17940412
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| | |||||||| ||| |||||||||||    
T  17940355 ccatacatattttatgatgaatcacaatgttccatcgttttagcatctcttctttcga 17940412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 25540778 - 25540835
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||||||| ||| |||||||||| || | |||||||||    
T  25540778 ccatacatattttatgatgaatcataattttttgtcgttttaatatcttttctttcga 25540835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 34321266 - 34321327
Alignment:
Q  25 ctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||| |||||||||||||||||||  |||||  ||||||| ||||||||||||||||||    
T  34321266 ctaatctcttgaacaaaatagaacatgttcttttcttacagcaaatctttataatgctttgg 34321327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 1220365 - 1220421
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  1220365 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 1220421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 9979501 - 9979445
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  9979501 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 9979445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 24445774 - 24445830
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  24445774 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 24445830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 1072698 - 1072643
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||   |||||| |||||||||||||| |||||||||    
T  1072698 ccatacatattttatgatgaatttcaatgttccgtcgttttaacatctcttctttc 1072643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 18312625 - 18312680
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||||| ||||||  ||||||| ||||| |||||||||    
T  18312625 ccatacatattttatgatgaatcacaatgttctgtcgtttcaacatctcttctttc 18312680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 30044375 - 30044442
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| ||||||   ||||  ||||||| ||||||||||||||||||    
T  30044375 gttttcctaatctcttgaacaaaataaaacatgtttttttcatacagcaaatctttataatgctttgg 30044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 4424652 - 4424718
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||||  | |||||||||| ||||||    
T  4424652 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacaataaatctttataacgctttg 4424718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 21800354 - 21800408
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||| |||| |||||| ||||||||| |||| |||||||||    
T  21800354 catacatattttatgatgcatcacaatgttccgtcgtttttacatctcttctttc 21800408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 33320861 - 33320807
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||| ||||||  ||||||||||||| | ||||||    
T  33320861 ccatacatattttatgatgaatcacaatgttctgtcgttttaacatcttttcttt 33320807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 34321926 - 34321980
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||| ||||||||||| |||||| ||| |||||||||| |||||||||||    
T  34321926 tacatatttcatgatgaatcacaatgttccgttgttttaacatctcttctttcga 34321980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 4108564 - 4108621
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||| |||||||| |||||| ||| |||||||||| | |||||||||    
T  4108564 ccatacatattttataatgaatcacaatgttccgttgttttaacatcttttctttcga 4108621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 7223136 - 7223189
Alignment:
Q  96 atacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||||||||||| |||||| | || ||||||||| |||||||||    
T  7223136 atacatattttatgatgaatcacaatgttccatcattttaacatctcttctttc 7223189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 15275826 - 15275886
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatg 80  Q
    ||||| |||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||    
T  15275826 ttttcataatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatg 15275886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 14831652 - 14831719
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||| |||||||| |||||||||||||||||||   |||| ||||| || ||||||||||| ||||||    
T  14831652 gtttacctaatctcttgaacaaaatagaacatgttattttcctacaacaaatctttataattctttgg 14831719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 18599066 - 18598999
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||  |||||| |||||||  |||| |||||| | ||||||||||||||||||    
T  18599066 gttttcctaatctcttgagaaaaataaaacatgctattttcctacagtaaatctttataatgctttgg 18598999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 22373921 - 22373854
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||| ||| | ||||| ||||| ||||| || || |||||||||||||||    
T  22373921 gttttcctaatctcttgaacaacataaatcatgctcttttcctacaacaaatttttataatgctttgg 22373854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 15276472 - 15276521
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatctt 144  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||| ||||    
T  15276472 catacatattttatgatgaatcacaatattccgtcattttaacatctctt 15276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 25540240 - 25540301
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatg 80  Q
    ||||||||||||| ||||| |||||||||||||  ||||| ||||  || ||||||||||||    
T  25540240 gttttcctaatctcttgaataaaatagaacatgttcttttcctacgacaaatctttataatg 25540301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 53040 - 52973
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||    
T  53040 gttttcctaatctcttgaacaaaatagaacatgctcttttcctacatcaaatctttataatgctttgg 52973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 13003 - 12936
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| |||||||||||| |||||    
T  13003 gttttcctaatctcttgaacaaaatagaacatgttcttttcctacagcaaatctttataatgttttgg 12936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 12329 - 12272
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| | |||||||||    
T  12329 ccatacatattttatgatgaatcacaatgttccgtcgttttaacatcttttctttcga 12272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 152227 - 152160
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||| |||||||||||||  |||| |||||||| ||||||||||||||||||    
T  152227 gttttcctaatctcttgaaccaaatagaacatgctattttcctacagcaaatctttataatgctttgg 152160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 64706 - 64662
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctac 63  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  64706 gtttttctaatctcttgaacaaaatagaacatgctcttttcctac 64662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 3490 - 3424
Alignment:
Q  20 ttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||| |||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||    
T  3490 ttttcctaatctcttgaacaaaataaaacatgctcttttcctacaacaaatctttataatgctttgg 3424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 2823 - 2767
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||| |||||||||| |||||| |||| |||||| || |||||||||||    
T  2823 catacatattttttgatgaatcacaatgttccgtcattttaatatctcttctttcga 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 17006 - 17060
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  17006 catacatattttatgatgaatcacaatgttccgtcgttttaacatctcttctttc 17060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 101567 - 101623
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||| |||||||||||    
T  101567 catacatattttatgatgaatcacaatgttctgtcgttttaacatctcttctttcga 101623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 100790 - 100849
Alignment:
Q  27 aatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||||||||||| |||||    
T  100790 aatctcttgaacaaaatagaacatgctcttttcctacagcaaatctttataatgttttgg 100849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 10682 - 10615
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||| | || ||||||||||||||||||    
T  10682 gttttcctaatctcttgaacaaaatagaacatgttcttttcctataacaaatctttataatgctttgg 10615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 10136 - 10091
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  10136 ccatacatattttatgatgaatcacaatgttccgtcgttttaacat 10091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 26668 - 26734
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttg 85  Q
    ||||||||||||| |||||||||||| ||||||| ||||| |||| | | |||||||||||||||||    
T  26668 gttttcctaatctcttgaacaaaataaaacatgctcttttcctacggtaaatctttataatgctttg 26734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 29751 - 29697
Alignment:
Q  97 tacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||| |||||| |||||| |||||||||||||| |||||||||||    
T  29751 tacatattttatgaggaatcacaatgttccgtcgttttaacatctcttctttcga 29697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 30069 - 30003
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| ||||||||| |||||||||   |||| |||||| | ||||||||||||||||||    
T  30069 gttttcctaatctcttgaacaaa-tagaacatgtttttttcctacaggaaatctttataatgctttgg 30003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 120760 - 120814
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| ||||||||    
T  120760 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttcttt 120814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 3268 - 3313
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  3268 ccatacatattttatgatgaatcacaatgttccgtcgttttaacat 3313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 18820 - 18764
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  18820 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 18764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 25764 - 25712
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttct 146  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| ||||||    
T  25764 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttct 25712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 26433 - 26365
Alignment:
Q  18 agttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||| ||||  |||||| |||||||  |||| |||||| | ||||||| ||||||||||    
T  26433 agttttcctaatctcttgagaaaaataaaacatgctattttcctacagtaaatctttacaatgctttgg 26365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 231820 - 231876
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||| | |||||||||    
T  231820 catacatattttatgatgaatcacaatgttccgttgttttaacatcttttctttcga 231876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 10756 - 10808
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttct 146  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| ||||||    
T  10756 ccatacatattttatgatgaatcacaatgttccatcgttttaacatctcttct 10808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 10110 - 10178
Alignment:
Q  18 agttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    |||||||||||||| ||||  |||||| |||||||  |||| |||||| | ||||||| ||||||||||    
T  10110 agttttcctaatctcttgagaaaaataaaacatgctattttcctacagtaaatctttacaatgctttgg 10178  T

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Target: scaffold1634 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 437 - 380
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    |||||||||||||||||||||||| ||| || | |||| ||||||| |||||||||||    
T  437 ccatacatattttatgatgaatcacaatattccatcgtgttaacatctcttctttcga 380  T

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Target: scaffold0121 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 14733 - 14680
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttcttt 148  Q
    ||||||||||||||||||||||| |||||| | || ||||||||| ||||||||    
T  14733 catacatattttatgatgaatcacaatgttccatcattttaacatctcttcttt 14680  T

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Target: scaffold0110 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 48640 - 48584
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttcga 151  Q
    ||||||||||||||||||||||| ||||||  ||| |||||| || |||||||||||    
T  48640 catacatattttatgatgaatcacaatgttatgtcattttaatatctcttctttcga 48584  T

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Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 49307 - 49240
Alignment:
Q  19 gttttcctaatcttttgaacaaaatagaacatgccctttttctacagcagatctttataatgctttgg 86  Q
    ||||||||||||| |||||||||||| |||||||  ||||  ||||||| | ||||||||| ||||||    
T  49307 gttttcctaatctcttgaacaaaataaaacatgcttttttcatacagcaaacctttataatactttgg 49240  T

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Target: scaffold0069 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 13580 - 13624
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||    
T  13580 catacatattttatgatgaatcacaatgttccgttgttttaacat 13624  T

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Target: scaffold1891 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1891
Description:

Target: scaffold1891; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 257 - 311
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||| |||||||||||||||||| || ||| |||| ||||||||| |||||||||    
T  257 catatatattttatgatgaatcacaaagttccgtcattttaacatctcttctttc 311  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 5327 - 5381
Alignment:
Q  95 catacatattttatgatgaatcataatgtttcgtcgttttaacatatcttctttc 149  Q
    |||||||||||||| |||||| | |||||| ||| |||||||||| |||||||||    
T  5327 catacatattttataatgaattacaatgttccgttgttttaacatctcttctttc 5381  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 4368 - 4323
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    ||||||| || ||||||||||||| |||||| ||||||||||||||    
T  4368 ccatacaaatgttatgatgaatcacaatgttccgtcgttttaacat 4323  T

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Target: scaffold0032; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 10817 - 10772
Alignment:
Q  94 ccatacatattttatgatgaatcataatgtttcgtcgttttaacat 139  Q
    ||||||| || ||||||||||||| |||||| ||||||||||||||    
T  10817 ccatacaaatgttatgatgaatcacaatgttccgtcgttttaacat 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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