View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6277_low_75 (Length: 250)

Name: NF6277_low_75
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6277_low_75
NF6277_low_75
[»] chr8 (36 HSPs)
chr8 (1-240)||(7960477-7960725)
chr8 (42-240)||(16364907-16365105)
chr8 (42-240)||(14921366-14921564)
chr8 (42-240)||(32983127-32983325)
chr8 (42-240)||(24580441-24580639)
chr8 (42-240)||(38600753-38600951)
chr8 (42-240)||(8000021-8000214)
chr8 (39-240)||(7383097-7383298)
chr8 (42-240)||(35056179-35056377)
chr8 (65-240)||(41478601-41478776)
chr8 (42-240)||(40680349-40680547)
chr8 (39-240)||(44710074-44710274)
chr8 (42-214)||(26241267-26241439)
chr8 (42-240)||(26106378-26106575)
chr8 (67-240)||(41478356-41478529)
chr8 (39-214)||(36684669-36684844)
chr8 (154-240)||(23444495-23444581)
chr8 (42-240)||(39506555-39506753)
chr8 (108-240)||(4376957-4377089)
chr8 (41-237)||(12637984-12638179)
chr8 (42-214)||(36054595-36054767)
chr8 (160-240)||(44755621-44755701)
chr8 (69-240)||(13450703-13450874)
chr8 (42-227)||(11989029-11989214)
chr8 (42-214)||(7323143-7323315)
chr8 (116-214)||(16383884-16383982)
chr8 (42-194)||(33303752-33303906)
chr8 (116-214)||(30577080-30577178)
chr8 (42-129)||(44755544-44755631)
chr8 (42-212)||(10921068-10921237)
chr8 (48-168)||(23950294-23950414)
chr8 (107-240)||(4158084-4158217)
chr8 (42-97)||(16383970-16384025)
chr8 (42-97)||(32415404-32415459)
chr8 (39-182)||(12615122-12615260)
chr8 (60-214)||(31519157-31519306)
[»] chr4 (49 HSPs)
chr4 (38-240)||(29590397-29590599)
chr4 (42-242)||(12582099-12582299)
chr4 (41-240)||(17981225-17981424)
chr4 (42-240)||(46903819-46904017)
chr4 (42-239)||(4422060-4422257)
chr4 (42-240)||(31842846-31843044)
chr4 (41-240)||(48659319-48659518)
chr4 (109-240)||(42431683-42431814)
chr4 (42-240)||(50637101-50637304)
chr4 (107-240)||(29525170-29525303)
chr4 (43-237)||(49389438-49389627)
chr4 (125-240)||(33239718-33239833)
chr4 (40-240)||(34432915-34433115)
chr4 (42-214)||(38308025-38308197)
chr4 (42-214)||(48826000-48826172)
chr4 (42-240)||(517548-517746)
chr4 (116-240)||(3095440-3095564)
chr4 (41-214)||(10010820-10010993)
chr4 (41-214)||(10017961-10018134)
chr4 (41-214)||(40730390-40730563)
chr4 (42-214)||(8753740-8753911)
chr4 (45-240)||(20392851-20393047)
chr4 (42-201)||(36488771-36488930)
chr4 (39-214)||(47691580-47691750)
chr4 (58-214)||(38973598-38973754)
chr4 (160-232)||(45783843-45783915)
chr4 (42-210)||(9627486-9627654)
chr4 (42-214)||(16711743-16711915)
chr4 (38-214)||(48801189-48801360)
chr4 (43-214)||(7363488-7363658)
chr4 (42-165)||(48089793-48089916)
chr4 (116-196)||(14599056-14599136)
chr4 (42-202)||(32468241-32468397)
chr4 (60-214)||(41324366-41324519)
chr4 (118-240)||(34553841-34553963)
chr4 (42-99)||(3097931-3097988)
chr4 (69-214)||(20039607-20039752)
chr4 (165-236)||(5258843-5258914)
chr4 (40-99)||(11845422-11845481)
chr4 (42-202)||(22270366-22270521)
chr4 (122-214)||(8672819-8672911)
chr4 (40-168)||(37010983-37011110)
chr4 (116-214)||(32212260-32212358)
chr4 (42-99)||(25040255-25040312)
chr4 (60-214)||(41487467-41487616)
chr4 (42-98)||(5258756-5258812)
chr4 (158-214)||(11845336-11845392)
chr4 (201-240)||(35041768-35041807)
chr4 (118-156)||(20484363-20484401)
[»] chr6 (30 HSPs)
chr6 (39-240)||(1101185-1101386)
chr6 (42-240)||(32187210-32187408)
chr6 (41-240)||(4174144-4174343)
chr6 (41-240)||(13041621-13041820)
chr6 (60-240)||(34858146-34858326)
chr6 (55-240)||(4229757-4229942)
chr6 (42-240)||(1558606-1558799)
chr6 (44-240)||(479105-479301)
chr6 (42-240)||(17156229-17156422)
chr6 (38-214)||(28890860-28891036)
chr6 (41-214)||(13276559-13276732)
chr6 (42-214)||(5153316-5153488)
chr6 (40-214)||(4111336-4111510)
chr6 (42-214)||(3027236-3027408)
chr6 (42-214)||(3729004-3729176)
chr6 (109-240)||(14500067-14500198)
chr6 (107-202)||(32158082-32158177)
chr6 (60-214)||(27613293-27613447)
chr6 (116-214)||(3257188-3257286)
chr6 (42-168)||(8437570-8437696)
chr6 (37-211)||(12296879-12297055)
chr6 (155-236)||(11982389-11982470)
chr6 (107-240)||(27797654-27797785)
chr6 (145-236)||(33042849-33042940)
chr6 (48-214)||(31803068-31803234)
chr6 (108-164)||(7458786-7458842)
chr6 (42-81)||(11982508-11982547)
chr6 (42-99)||(24848888-24848945)
chr6 (162-214)||(1449808-1449860)
chr6 (158-234)||(9283842-9283918)
[»] chr2 (39 HSPs)
chr2 (41-240)||(2994969-2995168)
chr2 (42-240)||(6431516-6431714)
chr2 (41-240)||(29768289-29768487)
chr2 (42-240)||(35959329-35959527)
chr2 (42-240)||(44092734-44092932)
chr2 (60-240)||(25879672-25879852)
chr2 (109-240)||(42077016-42077147)
chr2 (42-240)||(29044105-29044296)
chr2 (40-240)||(2182645-2182845)
chr2 (116-240)||(2611351-2611475)
chr2 (60-240)||(7298844-7299024)
chr2 (107-240)||(6283428-6283561)
chr2 (40-214)||(40737798-40737972)
chr2 (40-214)||(29557413-29557587)
chr2 (50-237)||(6419886-6420073)
chr2 (49-236)||(31452813-31452999)
chr2 (39-214)||(34726277-34726452)
chr2 (36-177)||(26260255-26260396)
chr2 (42-214)||(21198088-21198260)
chr2 (40-240)||(22439840-22440039)
chr2 (42-214)||(12033777-12033948)
chr2 (135-237)||(12465756-12465858)
chr2 (42-168)||(13029104-13029230)
chr2 (113-214)||(18075733-18075834)
chr2 (107-240)||(43639038-43639171)
chr2 (161-240)||(1834272-1834351)
chr2 (116-214)||(38213470-38213568)
chr2 (107-240)||(15899632-15899760)
chr2 (133-202)||(38446291-38446360)
chr2 (48-98)||(17852818-17852868)
chr2 (42-128)||(6283332-6283418)
chr2 (42-136)||(38448062-38448156)
chr2 (36-99)||(36985447-36985510)
chr2 (164-214)||(43616404-43616454)
chr2 (42-99)||(32084181-32084238)
chr2 (133-234)||(42516974-42517075)
chr2 (200-240)||(26260210-26260250)
chr2 (113-188)||(39133299-39133374)
chr2 (123-164)||(17740528-17740569)
[»] chr7 (43 HSPs)
chr7 (42-240)||(21806500-21806698)
chr7 (46-240)||(12419080-12419273)
chr7 (42-240)||(41902764-41902962)
chr7 (42-240)||(10227858-10228056)
chr7 (42-240)||(27595563-27595760)
chr7 (42-240)||(31377365-31377563)
chr7 (45-240)||(13391057-13391252)
chr7 (41-240)||(46191594-46191793)
chr7 (42-240)||(23671077-23671270)
chr7 (42-240)||(2941050-2941253)
chr7 (77-240)||(41631493-41631656)
chr7 (48-240)||(43596099-43596293)
chr7 (42-240)||(15757576-15757769)
chr7 (42-240)||(21441889-21442082)
chr7 (37-240)||(2196039-2196242)
chr7 (42-202)||(44848016-44848176)
chr7 (116-240)||(5667150-5667274)
chr7 (116-240)||(45470287-45470411)
chr7 (109-240)||(32584885-32585016)
chr7 (42-214)||(2732290-2732462)
chr7 (42-214)||(15943071-15943243)
chr7 (39-214)||(1411474-1411649)
chr7 (39-214)||(41892120-41892295)
chr7 (42-214)||(11410521-11410693)
chr7 (126-236)||(44409975-44410085)
chr7 (127-240)||(48829224-48829337)
chr7 (41-203)||(34521207-34521369)
chr7 (39-168)||(14776181-14776310)
chr7 (122-240)||(43341259-43341377)
chr7 (108-240)||(33450174-33450306)
chr7 (116-194)||(48214137-48214215)
chr7 (42-168)||(3356960-3357086)
chr7 (116-214)||(37807032-37807130)
chr7 (42-168)||(41399709-41399834)
chr7 (39-182)||(24421884-24422026)
chr7 (42-156)||(34002784-34002898)
chr7 (60-213)||(18533317-18533470)
chr7 (107-214)||(31673603-31673710)
chr7 (110-156)||(28489308-28489354)
chr7 (42-97)||(12077201-12077256)
chr7 (207-240)||(44848169-44848202)
chr7 (166-222)||(26574140-26574196)
chr7 (41-97)||(36820936-36820992)
[»] chr5 (38 HSPs)
chr5 (42-240)||(18158378-18158576)
chr5 (42-240)||(40083983-40084181)
chr5 (42-240)||(10017763-10017961)
chr5 (41-240)||(14949450-14949649)
chr5 (46-240)||(15397561-15397755)
chr5 (42-240)||(38254693-38254891)
chr5 (107-240)||(13916696-13916829)
chr5 (42-240)||(18295184-18295375)
chr5 (69-237)||(34855342-34855510)
chr5 (69-240)||(27054423-27054594)
chr5 (126-240)||(15678103-15678217)
chr5 (42-240)||(17869972-17870160)
chr5 (85-240)||(3880997-3881152)
chr5 (42-240)||(27332423-27332621)
chr5 (41-214)||(42062258-42062431)
chr5 (123-240)||(28210237-28210354)
chr5 (116-240)||(370230-370354)
chr5 (41-202)||(11877461-11877622)
chr5 (42-214)||(31271385-31271557)
chr5 (109-240)||(31624210-31624339)
chr5 (69-202)||(36113152-36113285)
chr5 (42-196)||(6644127-6644281)
chr5 (40-168)||(9163426-9163554)
chr5 (48-214)||(4101183-4101351)
chr5 (38-214)||(4049393-4049569)
chr5 (126-237)||(858720-858836)
chr5 (52-168)||(12880469-12880585)
chr5 (63-214)||(42288459-42288605)
chr5 (42-99)||(491253-491310)
chr5 (153-214)||(491340-491401)
chr5 (42-144)||(7035162-7035264)
chr5 (162-203)||(14084420-14084461)
chr5 (41-88)||(14084526-14084573)
chr5 (116-190)||(14084455-14084529)
chr5 (38-99)||(10931614-10931675)
chr5 (207-240)||(36113278-36113311)
chr5 (162-214)||(12724884-12724936)
chr5 (110-178)||(32253286-32253354)
[»] chr1 (52 HSPs)
chr1 (42-240)||(12298134-12298332)
chr1 (42-240)||(5499886-5500084)
chr1 (42-240)||(10805017-10805215)
chr1 (42-240)||(13077294-13077492)
chr1 (42-240)||(16452385-16452583)
chr1 (42-240)||(16461537-16461735)
chr1 (42-240)||(39919604-39919802)
chr1 (42-240)||(18342558-18342756)
chr1 (42-240)||(26257390-26257588)
chr1 (42-240)||(38672058-38672256)
chr1 (42-240)||(23555745-23555944)
chr1 (42-240)||(42384205-42384398)
chr1 (43-240)||(15849814-15850011)
chr1 (43-240)||(44779403-44779600)
chr1 (40-240)||(15321824-15322024)
chr1 (42-240)||(10311990-10312188)
chr1 (39-240)||(42649962-42650163)
chr1 (109-240)||(29522992-29523123)
chr1 (42-240)||(19507057-19507255)
chr1 (116-240)||(5506827-5506951)
chr1 (42-240)||(17386236-17386439)
chr1 (42-240)||(6305024-6305222)
chr1 (41-240)||(44912596-44912795)
chr1 (42-240)||(27090747-27090940)
chr1 (116-240)||(47367424-47367547)
chr1 (42-214)||(33785194-33785366)
chr1 (42-240)||(5616499-5616692)
chr1 (42-214)||(19708925-19709097)
chr1 (42-237)||(34049936-34050133)
chr1 (38-214)||(39860414-39860590)
chr1 (42-214)||(52222725-52222897)
chr1 (48-214)||(8417233-8417399)
chr1 (42-214)||(6889461-6889633)
chr1 (42-214)||(6891307-6891479)
chr1 (42-182)||(17805813-17805953)
chr1 (60-211)||(31493397-31493548)
chr1 (119-240)||(7329664-7329785)
chr1 (108-240)||(46313691-46313823)
chr1 (69-214)||(46846785-46846930)
chr1 (42-196)||(50097012-50097166)
chr1 (60-214)||(44969045-44969199)
chr1 (69-214)||(13253271-13253415)
chr1 (70-214)||(6888950-6889093)
chr1 (42-169)||(24038241-24038368)
chr1 (160-214)||(3831588-3831642)
chr1 (179-240)||(31316145-31316206)
chr1 (158-214)||(45372736-45372792)
chr1 (42-214)||(2988656-2988823)
chr1 (158-215)||(8703847-8703904)
chr1 (38-99)||(34083965-34084026)
chr1 (116-196)||(31225554-31225634)
chr1 (118-234)||(31502297-31502412)
[»] chr3 (53 HSPs)
chr3 (40-240)||(9338188-9338388)
chr3 (40-240)||(41636281-41636481)
chr3 (42-240)||(4356950-4357148)
chr3 (42-240)||(25593599-25593797)
chr3 (42-240)||(24133761-24133954)
chr3 (42-240)||(41129649-41129842)
chr3 (39-240)||(46136290-46136486)
chr3 (40-240)||(26994687-26994887)
chr3 (42-240)||(39889321-39889519)
chr3 (42-240)||(42294114-42294307)
chr3 (42-202)||(51302361-51302521)
chr3 (42-240)||(4481649-4481847)
chr3 (109-240)||(50638550-50638681)
chr3 (107-236)||(35761439-35761568)
chr3 (107-240)||(43010161-43010294)
chr3 (42-240)||(31405846-31406039)
chr3 (38-214)||(1782638-1782814)
chr3 (40-214)||(40000733-40000907)
chr3 (41-214)||(34705263-34705436)
chr3 (37-214)||(39391045-39391222)
chr3 (42-214)||(47597038-47597210)
chr3 (45-240)||(14751807-14752002)
chr3 (42-236)||(22523399-22523597)
chr3 (116-240)||(24120210-24120334)
chr3 (45-202)||(26020316-26020477)
chr3 (42-214)||(28793648-28793820)
chr3 (60-214)||(52174759-52174913)
chr3 (42-214)||(33249412-33249584)
chr3 (133-240)||(45387575-45387682)
chr3 (42-214)||(20647749-20647921)
chr3 (48-214)||(40488999-40489165)
chr3 (116-214)||(34422620-34422718)
chr3 (143-240)||(36265759-36265856)
chr3 (166-240)||(7046699-7046773)
chr3 (117-214)||(40000487-40000584)
chr3 (42-240)||(54447581-54447762)
chr3 (65-214)||(25536859-25537008)
chr3 (42-168)||(19420962-19421088)
chr3 (42-168)||(29076864-29076990)
chr3 (60-214)||(54650459-54650613)
chr3 (55-168)||(34636350-34636463)
chr3 (45-190)||(52274336-52274476)
chr3 (116-214)||(46068060-46068158)
chr3 (42-99)||(13596161-13596218)
chr3 (42-144)||(24541000-24541102)
chr3 (123-210)||(33069392-33069479)
chr3 (41-99)||(33069492-33069550)
chr3 (158-214)||(41873498-41873554)
chr3 (116-196)||(46116491-46116571)
chr3 (116-214)||(55008165-55008263)
chr3 (42-99)||(7046804-7046861)
chr3 (116-177)||(47844569-47844630)
chr3 (207-240)||(51302514-51302547)
[»] scaffold0886 (1 HSPs)
scaffold0886 (69-240)||(1713-1884)
[»] scaffold0422 (2 HSPs)
scaffold0422 (116-240)||(10681-10805)
scaffold0422 (40-96)||(10636-10692)
[»] scaffold0129 (1 HSPs)
scaffold0129 (42-214)||(40900-41072)
[»] scaffold0037 (1 HSPs)
scaffold0037 (42-214)||(81292-81464)
[»] scaffold0065 (1 HSPs)
scaffold0065 (42-214)||(39974-40147)
[»] scaffold0067 (1 HSPs)
scaffold0067 (42-214)||(14292-14463)
[»] scaffold0217 (1 HSPs)
scaffold0217 (116-214)||(15639-15739)
[»] scaffold0275 (2 HSPs)
scaffold0275 (42-152)||(9151-9261)
scaffold0275 (192-240)||(9274-9322)
[»] scaffold0005 (1 HSPs)
scaffold0005 (116-196)||(218242-218322)
[»] scaffold0259 (1 HSPs)
scaffold0259 (111-214)||(24846-24949)
[»] scaffold1702 (1 HSPs)
scaffold1702 (42-94)||(1-53)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 7960725 - 7960477
Alignment:
Q  1 tttagagtcatacgtataattgattgtaatgtcctcataattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgn 100  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||     
T  7960725 tttaaagtcatacggataattgattgtaatgtcctcataattaggggtgggaataagccaggccaggtcaggctttgataggcctgagtctggcctacg- 7960627  T
Q  101 nnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggct----------tggcctggcctatttaaaagtctggactggcct 190  Q
          |||||||||||| ||| |||||||| |||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||| |    
T  7960626 aaaaaattacaagcttgaccctagcctatggcctatcataggccgtttttcttggcttgacctggcctggcctgacctatttaaaagtctggactggctt 7960527  T
Q  191 gaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  7960526 gaaagcctacttatagacctacttcacattaaggtcatcaaatagttcat 7960477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 16365105 - 16364907
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| ||| |||| |||| |||||||||||||||||       | |||||| |||||||||| ||||| |||||||||    
T  16365105 taggggtgggaataggccaggccaggccagactttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcatatggcctatcatag 16365006  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  16365005 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcat 16364907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 14921366 - 14921564
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  14921366 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 14921465  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| ||||||| |||||||||||| || ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  14921466 gccgtttttctaggcctggcctgacctatttaaaagcctagactggcctgaaagcctacttacatgcctacttcacattaaggtcatcaaatagttcat 14921564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 32983325 - 32983127
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||||       | |||||| |||||||| ||||||| |||||||||    
T  32983325 taggggtgggaataggccaggccaggttaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcatag 32983226  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||| ||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  32983225 gccgtttttctaggtctggtctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 32983127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 24580441 - 24580639
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| ||| |||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  24580441 taggggtgggaataggccaggccaggccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 24580540  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    || |||||||| ||| ||||||||||||||||||||  ||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||||||    
T  24580541 gctgtttttctaggcctggcctggcctatttaaaagcgtggactggcctgaaagcctacttaaagacctgcttcacattaaggtcatcaaatagttcat 24580639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 38600951 - 38600753
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       |||||||| ||||||||| || ||| |||| ||||    
T  38600951 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctgggctgtggcctattatag 38600852  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| || ||| |||||||||||| ||||||| |||||||||||||||    
T  38600851 gccgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcat 38600753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 8000021 - 8000214
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||| |||     |||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  8000021 taggggtgggaataggccaggctagg-----ctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 8000115  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||||||| | |||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  8000116 gccgtttttctaggtctggcctgacttatttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 8000214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 39 - 240
Target Start/End: Complemental strand, 7383298 - 7383097
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    ||||||||||||||||||||||||||| | |||||||| |||| |||||| ||||||||||       | |||||| |||| ||||||||||| ||||||    
T  7383298 aattaggggtgggaataggccaggccaagccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatggcctatca 7383199  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttc 238  Q
    |||||||||||||| | | ||| ||| ||||||||||||  | ||||||||||||||| |||  | || ||||||||| |||||||||||||||||||||    
T  7383198 taggccgtttttctagacatggtctgacctatttaaaagcttagactggcctgaaagcctacaaacagacctacttcatattaaggtcatcaaatagttc 7383099  T
Q  239 at 240  Q
    ||    
T  7383098 at 7383097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 35056179 - 35056377
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||       ||||| || ||| |||||||||||| |||||||||    
T  35056179 taggggtgggaataggccaggtcaggtcaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgatcctggcctatggcctatcatag 35056278  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||| | ||| ||  ||| |||||||||||| |||||||| ||||||||| || |||  ||||||||| ||| ||||| |||||||||||||||    
T  35056279 gccgtttttttaggcctgatctgacctatttaaaagcctggactgacctgaaagcctaattacgggcctacttaacaataaggccatcaaatagttcat 35056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 41478776 - 41478601
Alignment:
Q  65 aggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctg 164  Q
    |||||||||||| |||| |||||||||||||||||       | |||||| ||| |||| |||||||  ||| |||||||||||||||  |  |||||||    
T  41478776 aggtcaggctttgataggcctgagtctggcctacgaaataaatcacaagcctgaacctgacctatggcttattataggccgtttttctaagtctggcctg 41478677  T
Q  165 gcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
     ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||||||||||||    
T  41478676 acctatttaaaagtctggactggcctgaaagcctacttaaagacctacttcacattaaggccatcaaatagttcat 41478601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 40680349 - 40680547
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||| ||||||||||| |||  |||||| | |||| |||||| ||||||||||       |||||||| |||||||||||||||| |||||||||    
T  40680349 tagggatggaaataggccaggtcagaccaggctatgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctatggcctatcatag 40680448  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| ||||||| ||| || |||||||||||| |||| || ||||||||||||||  || ||| | |||||||| ||||||||| |||||||||||||||    
T  40680449 gccatttttctaggcctgacctggcctatttgaaagcctagactggcctgaaagtctaattacaagcctacttaacattaaggccatcaaatagttcat 40680547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 240
Target Start/End: Original strand, 44710074 - 44710274
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| ||||||||||||||| |||  ||| |||| |||| |||||| || |||||||       | |||||| |||| ||| ||||||| ||||||    
T  44710074 aattagggatgggaataggccaggtcagaccagactttgataggcctgagcctcgcctacgaaataaatcacaagcctgagtctgacctatggcctatca 44710173  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttc 238  Q
    || |||||||| || ||| ||| ||| ||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||| |||||||||||||||    
T  44710174 taagccgtttt-ctaggcctggtctgacctatttaaaagtctggactgccctgaaagcctacttacatgcctacttcacattaaagtcatcaaatagttc 44710272  T
Q  239 at 240  Q
    ||    
T  44710273 at 44710274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 26241267 - 26241439
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  26241267 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 26241366  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  26241367 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 26241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 26106378 - 26106575
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| | || ||||||  |||||||||       | |||||| | |||||||||||||| |||||||||    
T  26106378 tagggttgggaataggccaggccaggccaggctttgaaaggcctgagcttggcctacgaaaattat-acaagcctaagcctggcctatggcctatcatag 26106476  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||  |||||||||||||| |||||||||| || |||||||||| || ||  | ||||| || | |||| ||||||||||||||||||    
T  26106477 gccgtttttcttggtctggcctggcctattaaaaagtctggcctagcctgaaagcctaatttgaagcctatttaatattatggtcatcaaatagttcat 26106575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 67 - 240
Target Start/End: Complemental strand, 41478529 - 41478356
Alignment:
Q  67 gtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggc 166  Q
    |||||||||| |||| | |||| ||||||||||       | |||||| ||| |||| |||||||  ||| |||||||||||||||  || || |||| |    
T  41478529 gtcaggctttgataggcttgagcctggcctacgaaataaatcacaagcctgaacctgacctatggcttattataggccgtttttctaagcctgacctgac 41478430  T
Q  167 ctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| |||||||||||||||    
T  41478429 ctatttaaaagtctggactggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttcat 41478356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 214
Target Start/End: Original strand, 36684669 - 36684844
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||| || ||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||    
T  36684669 aattagggttgggaataggccaggccaggccacgctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttca 36684768  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||  || | ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  36684769 taggcctattattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 36684844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 23444495 - 23444581
Alignment:
Q  154 ggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||    
T  23444495 ggcttggtctggcctatttaaaagtctggactggcctgaaagtctacttacaggcctacttcacattaaggccatcaaatagttcat 23444581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 39506753 - 39506555
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||| |||||||||||||||  ||| |||| | || |||||| ||||||||||        ||||||| | ||| |||||||||| |||||||||    
T  39506753 tagggttggaaataggccaggccagaccagactttgaaaggcctgagcctggcctacgaaagattatacaagcctaagcttggcctatggcctatcatag 39506654  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||| | |||||||||||| | |||||||||| ||||||||||||| |||||  | ||||| || |||||| | | ||||||||||||||    
T  39506653 gccgtttttcttgacctggcctggcctactaaaaagtctggtctggcctgaaagcctactttgaagcctatttaacattatgataatcaaatagttcat 39506555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 4376957 - 4377089
Alignment:
Q  108 tacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatagg 207  Q
    ||||||| | || ||||||||||| ||||||||||| |||||||||||| || ||||||||||| |||||||||| ||| ||||||||| |||||  | |    
T  4376957 tacaagcctaagtctggcctatggcctatcataggctgtttttcttggcctgacctggcctattaaaaagtctggcctgacctgaaagcctactttgaag 4377056  T
Q  208 cctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| || |||||| ||||||||||||||||||    
T  4377057 cctatttaacattatggtcatcaaatagttcat 4377089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 41 - 237
Target Start/End: Original strand, 12637984 - 12638179
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||||| ||||||||| |||||||| |||| ||| || ||||||||||       |||||||| |    ||||||||||| |||| |||    
T  12637984 ttaggggtgggaataggtcaggccaggccaggctttgataggcctaagcctggcctacgaaaaaaattacaagcctagatctggcctatggcctattata 12638083  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagtt 237  Q
    | ||  |||||||||| ||||||||||| |||||||| |||||||| ||||||||| || ||  || ||||||| ||||| ||||||||||||||||    
T  12638084 gaccaattttcttggcctggcctggcctgtttaaaagcctggactgacctgaaagccta-tttcagacctactttacatttaggtcatcaaatagtt 12638179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 36054767 - 36054595
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||  ||||| |||||||| |||| |||||| ||||||||||       || |  || |||||||||||||||| || ||||||    
T  36054767 tagggttgggaataggccataccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgctggcctgagcctggcctatggcctttcatag 36054668  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||  ||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  36054667 gcctatttttttggtctggcctggcctatttaaaagtctggtctggcctgaaagcctatttacaggcctactt 36054595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 44755621 - 44755701
Alignment:
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  44755621 gcctggcctatttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 44755701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 240
Target Start/End: Original strand, 13450703 - 13450874
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| ||| |||||| ||||||       ||| |||||||||| | || ||||| ||||||||||   |||||||||| |||| |||  |     
T  13450703 caggctttgataggcctaagtctgacctacgaaaaaaattataagcttgagcatagcatatggcctatcataggttatttttcttggtttggtctgatca 13450802  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||| |||||| |||||||||| |||||| | | ||||||||||||||||||||||||||||||||    
T  13450803 atttaaaagtatggacttgcctgaaagcctacttacatgtctacttcacattaaggtcatcaaatagttcat 13450874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 11989029 - 11989214
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| || ||||| |||| |||||| |||||| |||       || || || |||||||| ||||||| || ||||||    
T  11989029 tagggttgggaataggccaggccaggccatgctttgataggcctgagcctggccaacgaaaaaatttgcaggcctgagcctgacctatggcctttcatag 11989128  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtca 227  Q
    |||  || | ||||| ||||||| ||||||||||| ||||| ||||||||||||| || ||| ||||||||||  |||||| ||||    
T  11989129 gcctattattttggcctggcctgacctatttaaaattctggcctggcctgaaagcctatttacaggcctacttaccattaaagtca 11989214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 7323315 - 7323143
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| ||| ||||||||| |||||| || |||||||       || || || |||||||||| ||||| || ||||||    
T  7323315 tagggttgggaataggccaggccaggccagactttaataggcctgagcctagcctacgaaaaaatttgcaggcctgagcctggcatatggcctttcatag 7323216  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||| | || ||||||||||||||| |||||| ||| ||||||||| || ||| ||||||||||    
T  7323215 gcctatttttttgacctgtcctggcctatttaaatgtctggcctgacctgaaagcctatttacaggcctactt 7323143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 16383982 - 16383884
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| || |||||||||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  16383982 tgagcctggcctatggcctttcataggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 16383884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 194
Target Start/End: Complemental strand, 33303906 - 33303752
Alignment:
Q  42 taggggtgggaataggcca-ggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||| |||||||| |||| ||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||    
T  33303906 tagggttgggaatacgccanggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcata 33303807  T
Q  141 ggccgtttt-tcttggcttggcctggcctatttaaaagtctggactggcctgaaa 194  Q
    |||| | || | ||||  |||||||||||||||||||| |||| |||||||||||    
T  33303806 ggccctattattttggtctggcctggcctatttaaaagcctggcctggcctgaaa 33303752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 30577080 - 30577178
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| || |||||||||  |||| ||||| | || || |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  30577080 tgagcctggcctatggcctttcataggcctatttttttggcctagcttgacctatttaaaagcctggcctggcctgaaagcctatttagaggcctactt 30577178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 44755544 - 44755631
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctat 129  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| ||||||||||||||    
T  44755544 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctat 44755631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 212
Target Start/End: Original strand, 10921068 - 10921237
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||  ||||||| |||||||| |||| |||||| ||| ||||||       || || || | ||| |||||||||| || ||||||    
T  10921068 tagggttgggaataggcttggccaggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctaagcttggcctatggcctttcatag 10921167  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctac 212  Q
     ||  |||| ||||| |||||||||||||||| ||| ||||||| |||||||||| || ||| ||||||||    
T  10921168 acctatttttttggcctggcctggcctatttacaag-ctggactagcctgaaagcctatttacaggcctac 10921237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 168
Target Start/End: Original strand, 23950294 - 23950414
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtt 147  Q
    |||||||||||||||||||| |||||||| |||  |||||| ||||||||||       || || || |||||||||||||||| || |||||||||  |    
T  23950294 tgggaataggccaggccaggccaggctttgataagcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctat 23950393  T
Q  148 tttcttggcttggcctggcct 168  Q
    ||| ||||  |||||||||||    
T  23950394 ttttttggtctggcctggcct 23950414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 4158084 - 4158217
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||  ||||||| | ||||||||||||||||| ||||||||||||  | | |||  ||||||||||   | ||||| | ||||||| |||||  |     
T  4158084 ttacaagactgagcctagtctatggtctatcataggtcgtttttcttggtctagtctgaactatttaaaaacttagactgacttgaaagcctactttcat 4158183  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    | |||||| ||||||| |||||||||||||||||    
T  4158184 gtctactttacattaaagtcatcaaatagttcat 4158217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 16384025 - 16383970
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggccta 97  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||    
T  16384025 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggccta 16383970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 32415459 - 32415404
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggccta 97  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||| ||| ||||    
T  32415459 tagggttgggaataggccaggccaggtcaggctttgataggcctgagcctgaccta 32415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 12615122 - 12615260
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| ||||||||||||||||||||     |||| |||| |||||| ||| ||||||       || || || |||||||||||||||| || |||    
T  12615122 aattagggttgggaataggccaggccagg-----ctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttca 12615216  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctgg 182  Q
    ||||||  || | ||||  |||||||||||||||||||| ||||    
T  12615217 taggcctattattttggtctggcctggcctatttaaaagcctgg 12615260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 31519157 - 31519306
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    ||||||||||||||| | |||| |||||| ||||||||||       |  ||||| |||| |||| |||||| ||||||||||||  |||| |||||       
T  31519157 aggccaggtcaggctatgataggcctgagcctggcctacgaaaaaattagcaagcctgagtctggtctatggcctatcataggcctatttttttggc--- 31519253  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
      ||| | ||||||||||||||| || |||||||||| || ||| ||||||||||    
T  31519254 --ctgacttatttaaaagtctggcctagcctgaaagcctatttacaggcctactt 31519306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 29590599 - 29590397
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatc 137  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||    
T  29590599 taattaggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatc 29590500  T
Q  138 ataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagtt 237  Q
    ||||||||||||| | ||| ||||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  29590499 ataggccgtttttttaggcctggcctgacctatttaaaagtctggactagcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagtt 29590400  T
Q  238 cat 240  Q
    |||    
T  29590399 cat 29590397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 12582099 - 12582299
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||| |||||| |||||||||| |||||||| |||| |||||||||||||||||       | |||||| |||||||||||||||| |||||||||    
T  12582099 taggggtgagaatagtccaggccaggccaggctttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 12582198  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcatc 241  Q
    || |||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  12582199 gctgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcatc 12582298  T
Q  242 t 242  Q
    |    
T  12582299 t 12582299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 17981424 - 17981225
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||||||||||||||  ||| |||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| ||||||||    
T  17981424 ttaggggtgggaataggccaggccagaccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcata 17981325  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  17981324 ggccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggtcatcaaatagttcat 17981225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 46904017 - 46903819
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||| |||||||||| || ||||| |||| |||||| ||| ||||||       |||||||| |||||||||||| | | |||| ||||    
T  46904017 taggggtgggaatagaccaggccaggccatgctttgataggcctgagcctgacctacgaaattttttacaagcctgagcctggcctgtcgcctattatag 46903918  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||| |||||||||||||||    
T  46903917 gccgtttttcttggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcat 46903819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 4422060 - 4422257
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       ||||||||  |||| |||||| ||| |||| ||||    
T  4422060 taggggtgggaataggccaggccaggccaggctttgatagacctgagcctggcctacgaaaaaatttacaagccggagcttggcctgtggcctattatag 4422159  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    || |||||||||||| ||  ||| |||||||||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||||||||||||    
T  4422160 gctgtttttcttggcctgatctgacctatttaaaagtctggactggcctgcaagcctacttataggcctactttatattaaggtcatcaaatagttca 4422257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 31842846 - 31843044
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||| |||||| |||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  31842846 taggggtgggaataagccaggtcaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 31842945  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
     |||||||||| ||| |||||| |||||||||||||  ||||||| ||||||||| |||||| |||| ||||||||||||||| |||||||||||||||    
T  31842946 accgtttttctaggcctggcctagcctatttaaaagcatggactgccctgaaagcttacttacaggcttacttcacattaaggccatcaaatagttcat 31843044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 48659319 - 48659518
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||||||||||||||||||||||||  ||||||| |||| |||||| || |||||||       ||||| || |||||||||||||||  ||||||||    
T  48659319 ttaggggtgggaataggccaggccaggctaggctttgataggcctgagcctagcctacgaaaaaatttacaggcctgagcctggcctatgacctatcata 48659418  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||| || | || |||||||||||| |||||||||||||||||| || ||| | |||||||| ||||||||| |||||||||||||||    
T  48659419 ggccgtttttctaggcctgacttgacctatttaaaagcctggactggcctgaaagcctaattacaagcctacttgacattaaggccatcaaatagttcat 48659518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 42431814 - 42431683
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||| |||||| |||||||||||||||||||| ||||||||||| | | ||  ||||||||||||||||||||||||||||||||||| |||||| |||     
T  42431814 acaaacttgagtctggcctatggtctatcatatgccgtttttctagtcctgatctggcctatttaaaagtctggactggcctgaaagcctacttacaggt 42431715  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||| |||||||||||||||||||||||    
T  42431714 ctacttcatattaaggtcatcaaatagttcat 42431683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 50637304 - 50637101
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||| ||| |||| |||||||| |||| ||||||  |||||||||       | |||| | |||| ||||||||||| |||||||||    
T  50637304 taggggtgggaataggctaggtcaggccaggctttgataggcctgagcttggcctacgaaataaatcacaaacctgagtctggcctatggcctatcatag 50637205  T
Q  142 gccgtttttct-----tggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    ||| |||||||     |||||||||||||||||||||||||  |||||||| |||||||| |||||| | |||||||||||||||||| |||||||||||    
T  50637204 gccatttttctaggcctggcttggcctggcctatttaaaagcatggactggtctgaaagcctacttacatgcctacttcacattaaggccatcaaatagt 50637105  T
Q  237 tcat 240  Q
    ||||    
T  50637104 tcat 50637101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 29525170 - 29525303
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||| |||| ||||||||||||||||||||||  |||||||||||| || ||  |     
T  29525170 ttacaagcttgagcctggcctatggcctatcatatgccatttttcttgacttgacctggcctatttaaaagtctggcttggcctgaaagcctatttccaa 29525269  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||| |||||||||||||||||||||||||    
T  29525270 gcctactttacattaaggtcatcaaatagttcat 29525303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 49389438 - 49389627
Alignment:
Q  43 aggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatagg 142  Q
    ||||||||||||||||||||||||||     ||| |||| |||||| ||||||||||       | |||||| |||| ||||| ||||||||||||||||    
T  49389438 aggggtgggaataggccaggccaggt-----tttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcttatggtctatcatagg 49389532  T
Q  143 ccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagtt 237  Q
    | |||||| | ||  || |||| ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||||    
T  49389533 ctgtttttttaggtctgacctgacctatttaaaagtctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagtt 49389627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 33239718 - 33239833
Alignment:
Q  125 cctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaagg 224  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||| |||||| || |||||||||||||||||    
T  33239718 cctatggcctatcataggccgtttttctaggcctggcctggcctatttaaaagcttggactggcctgaaagcctacttacagacctacttcacattaagg 33239817  T
Q  225 tcatcaaatagttcat 240  Q
     |||||||||||||||    
T  33239818 ccatcaaatagttcat 33239833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 34433115 - 34432915
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| |||||||| | |||||||||||||||||| | || ||| |||||  ||||||        ||||||| | |||||||||||||| |||||||    
T  34433115 attagggttgggaataagtcaggccaggtcaggctttgaaaggccttagtctaacctacgaaaaattatacaagcctaagcctggcctatggcctatcat 34433016  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    | ||||||||||||||| |||||||||||||| ||||  |||| ||||||||||||| |||||  | ||||| || |||||| |||||||||||||||||    
T  34433015 aagccgtttttcttggcctggcctggcctattaaaaaacctggtctggcctgaaagcctactttgaagcctatttaacattatggtcatcaaatagttca 34432916  T
Q  240 t 240  Q
    |    
T  34432915 t 34432915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 38308197 - 38308025
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  38308197 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcatag 38308098  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| ||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  38308097 gcctattattttggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 38308025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 48826000 - 48826172
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  48826000 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 48826099  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| ||||||||||||||||||||||| | ||||||||||||| || ||||||||||||||    
T  48826100 gcctattattttggcctggcctggcctatttaaaagtctagcctggcctgaaagcctatttataggcctactt 48826172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 517548 - 517746
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| |||| |||| ||| |||| ||||  ||||| ||||||||||       | ||||  ||||| |||| |||||| |||||||||    
T  517548 taggggtgggaataggtcaggtcaggccagactttgataggtctgagcctggcctacgaaataaatcacaaatttgagtctggtctatggcctatcatag 517647  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||| ||| |||||||||||| ||||||||  |||||||  |||||| ||||||||||||||||||||||||| ||||||||||    
T  517648 gccgtttttctaggtctggtctgacctatttaaaagcctggactgatctgaaagtctacttacaggcctacttcacattaaggtcatcgaatagttcat 517746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 3095564 - 3095440
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||||||| | ||||| |||||||||||  ||||||| ||  ||||||  |||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  3095564 tgagcctgacatatggcctatcataggctatttttctaggtctggcctaacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttc 3095465  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||||||||||    
T  3095464 acattaaggtcatcaaatagttcat 3095440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 10010993 - 10010820
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| ||||||||||||||| |||| |||||||| |||| |||||| ||||||||||       || || || ||||||||||||||||||| |||||    
T  10010993 ttagggttgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggtctttcata 10010894  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||  || | ||||| ||||||| |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  10010893 ggcctattattttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 10010820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 10018134 - 10017961
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| ||||||||||||||| |||| |||||||| |||| |||||| ||||||||||       || || || ||||||||||||||||||| |||||    
T  10018134 ttagggttgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggtctttcata 10018035  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||  || | ||||| ||||||| |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  10018034 ggcctattattttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 10017961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 40730563 - 40730390
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||    
T  40730563 ttagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcata 40730464  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||  || | ||||| |||||||||||||||||||| || | ||||||||||||| || ||| ||||||||||    
T  40730463 ggcctattattttggcctggcctggcctatttaaaagcctagcctggcctgaaagcctatttacaggcctactt 40730390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 8753911 - 8753740
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| | |||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  8753911 tagggttgggaataggccaggccaggccaggctttgataggcatgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 8753812  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| || |||||||||||||||||||||  ||||||||||||| || ||||||||||||||    
T  8753811 gcctatttttttggcctgacctggcctatttaaaagtctgatctggcctgaaagccta-ttataggcctactt 8753740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 240
Target Start/End: Complemental strand, 20393047 - 20392851
Alignment:
Q  45 gggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnntt-acaagcttgagcctggcctatggtctatcataggc 143  Q
    |||||| ||||||||||||||||||||||||| |||| |||||| |||||||| |       || ||| || |||||||||||||||  ||||| ||||     
T  20393047 gggtggaaataggccaggccaggtcaggctttgataggcctgagcctggcctatgaattttttttacaggcctgagcctggcctatgacctatcgtaggt 20392948  T
Q  144 cgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||| ||   |  ||| ||||||||||||||||||||||||||||||| || ||| | |||||||| ||| ||||| |||||||||||||||    
T  20392947 cgtttttctaggtcagatctgacctatttaaaagtctggactggcctgaaagcctaattacatgcctacttaacaataaggccatcaaatagttcat 20392851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 201
Target Start/End: Original strand, 36488771 - 36488930
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| ||| |||| ||||  ||||| ||||||||||       | |||||| |||| |||| ||||||||||||||||    
T  36488771 tagggatgggaataggccaggccaggccagactttgataggtctgagcctggcctacgaaataaatcacaagcctgagtctggtctatggtctatcatag 36488870  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatact 201  Q
    ||| ||||| | ||  ||||||||||||||||||||  |||||||| |||||||| ||||    
T  36488871 gccatttttttaggtctggcctggcctatttaaaagcttggactggtctgaaagcctact 36488930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 214
Target Start/End: Original strand, 47691580 - 47691750
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||      |||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||    
T  47691580 aattagggttgggaataggccaggccaga-----ctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttca 47691674  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||  || | ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  47691675 taggcctattattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 47691750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 214
Target Start/End: Original strand, 38973598 - 38973754
Alignment:
Q  58 ccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggct 157  Q
    |||||||||| || ||||| |||| |||||| |||| |||||       || || || |||||||||||||||| || |||||||||  |||| |||||     
T  38973598 ccaggccaggccatgctttgataggcctgagcctggactacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcc 38973697  T
Q  158 tggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    || ||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  38973698 tgacctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 38973754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 45783915 - 45783843
Alignment:
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaa 232  Q
    ||||||||| |||||||| |||||||||||||||||  |||||| | ||||||||||||||||||||||||||    
T  45783915 gcctggcctgtttaaaagcctggactggcctgaaagtctacttacatgcctacttcacattaaggtcatcaaa 45783843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 210
Target Start/End: Original strand, 9627486 - 9627654
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||| ||||||||||| |||| |||||||| |||| |||||| |||||||||        || || || |||| ||| ||||||| || ||||||    
T  9627486 tagggttggaaataggccaggtcaggccaggctttgataggcctgagcctggcctacaaaagaatttgcaggcctgagtctgacctatggcctttcatag 9627585  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcct 210  Q
    |||  |||| ||||| || ||| |||||||||||||||||| ||| ||||||||| || ||||||||||    
T  9627586 gcctatttttttggcctgccctagcctatttaaaagtctggcctgacctgaaagcctatttataggcct 9627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 16711743 - 16711915
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||| |||||| ||||||| |  ||||||| ||||  ||||||||||||||||       || || || |||||||||||||||| || ||| ||    
T  16711743 tagggttggaaataggtcaggccaagctaggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcacag 16711842  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| ||||||||||||||||||||||||| ||| ||||||| | || ||| ||||||||||    
T  16711843 gcctattcttttggcctggcctggcctatttaaaagtctggcctgacctgaaaacctatttacaggcctactt 16711915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 48801360 - 48801189
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatc 137  Q
    ||||||||| ||||||||||||||||||||     |||| |||| |||||| |||||| |||       || || || |||||||||||||||  || ||    
T  48801360 taattagggttgggaataggccaggccagg-----ctttgataggcctgagcctggccaacgaaaaaatttgcaggcctgagcctggcctatgacctttc 48801266  T
Q  138 ataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||  |||| ||||| ||| ||| |||||||||||||||||  |||||||||||| || ||| ||||||||||    
T  48801265 ataggcctatttttttggcctggtctgtcctatttaaaagtctggtttggcctgaaagcctatttacaggcctactt 48801189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 7363658 - 7363488
Alignment:
Q  43 aggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatagg 142  Q
    |||| ||||||||||||||| || | |||||||| |||| | |||| ||||||||||       || || || |||||||||||||||| || |||||||    
T  7363658 agggttgggaataggccaggtcatgccaggctttgatag-cttgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatagg 7363560  T
Q  143 ccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||  |||| |||   |||||||||||| |||||||||||| ||| ||||||||| || ||| ||||||||||    
T  7363559 cctatttttttgatctggcctggcctacttaaaagtctggcctgacctgaaagcctatttacaggcctactt 7363488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 165
Target Start/End: Complemental strand, 48089916 - 48089793
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||||       || || || |||||||||| ||||| || ||||||    
T  48089916 tagggttgggaataggccaggccaggtcaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcatatggcctttcatag 48089817  T
Q  142 gccgtttttcttggcttggcctgg 165  Q
    |||  |||| ||||| ||||||||    
T  48089816 gcctatttttttggcctggcctgg 48089793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 14599056 - 14599136
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagc 196  Q
    |||| ||||||||||| || |||||||||  |||| |||| |||| ||||||||||||||||||||| |||||||||||||    
T  14599056 tgagtctggcctatggcctttcataggcctatttttttggtttggtctggcctatttaaaagtctggcctggcctgaaagc 14599136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 32468397 - 32468241
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg-nnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||| |||||||||||||||| ||| |||| |||| ||||||||| |||||||        |||||||||| |||||||||||||| |||||||     
T  32468397 taggggtggaaataggccaggccaggccagactttgatagacctgagtctagcctacgaaaaaaatttacaagcttaagcctggcctatggcctatcatt 32468298  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    | | | ||||     ||||| ||| ||||||||||||||||  ||||||||||||| |||||    
T  32468297 gactggtttt-----cttggtctgacctatttaaaagtctgacctggcctgaaagcctactt 32468241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 214
Target Start/End: Complemental strand, 41324519 - 41324366
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| |||| |||||||||||||||||       || || || |||| ||||||||||| || |||||||||  |||| ||||  ||    
T  41324519 aggccaggccaggctttgataggcctgagtctggcctacgaaaaat-ttgcaggcctgagtctggcctatggcctttcataggcctatttttttggtctg 41324421  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    | ||||||||||||||||||||| ||| ||||||||| || ||| ||| ||||||    
T  41324420 gtctggcctatttaaaagtctggtctgacctgaaagcctatttacagggctactt 41324366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 240
Target Start/End: Complemental strand, 34553963 - 34553841
Alignment:
Q  118 agcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcac 217  Q
    |||||||||||||| |||| ||||| | ||||| || |  |  ||| |||||||||||||  ||||||||||||||||| |||||| | |||||||| ||    
T  34553963 agcctggcctatggcctattataggtcttttttttttgtctaacctagcctatttaaaaggttggactggcctgaaagcctacttacatgcctactttac 34553864  T
Q  218 attaaggtcatcaaatagttcat 240  Q
    || |||  |||||||||||||||    
T  34553863 atcaagaccatcaaatagttcat 34553841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 3097988 - 3097931
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||    
T  3097988 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacg 3097931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 20039752 - 20039607
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||||||  |||| ||||| |||||||| ||    
T  20039752 caggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctggtct 20039653  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||  ||  ||| ||||||||| || ||| ||||||||||    
T  20039652 atttaaaagcatgccctgacctgaaagcctatttacaggcctactt 20039607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 5258843 - 5258914
Alignment:
Q  165 gcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    ||||||||||||| |||||  | ||||||||| |||||| || ||||||| |||||||||||||||||||||    
T  5258843 gcctatttaaaagcctggaacgacctgaaagcctacttacagacctactttacattaaggtcatcaaatagt 5258914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 11845481 - 11845422
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||    
T  11845481 attagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacg 11845422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 202
Target Start/End: Complemental strand, 22270521 - 22270366
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| |||| |||   ||||||| |||| |||||| || ||||||        |||||||||||||||||||||||||  ||||||||    
T  22270521 taggggtgggaataggtcaggtcagacaaggctttgataggcctgagcctagcctactaaaatttttacaagcttgagcctggcctatggcatatcatag 22270422  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    | | |||||     ||| | ||||||||||||||||||||| |||| |||| ||| |||||    
T  22270421 gtcattttt-----ctttgtctggcctatttaaaagtctgggctggtctgagagcctactt 22270366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 8672819 - 8672911
Alignment:
Q  122 tggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||| || |||||||||  |||| || |||||| ||||| ||||||||||||| | ||||||| ||||| || ||| ||||||||||    
T  8672819 tggcctatggcctttcataggcctattttttttgcttggtctggcttatttaaaagtctagcctggcctaaaagcctatttacaggcctactt 8672911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 37011110 - 37010983
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| ||||||||||| |||||||| ||| |||| |||| |||||| ||||||||||       || || || |||| ||||||||||| || ||||    
T  37011110 attagggttgggaataggctaggccaggccagactttgataggcctgagcctggcctacgaaaaaatttgcaggcctgag-ctggcctatggcctttcat 37011012  T
Q  140 aggccgtttttcttggcttggcctggcct 168  Q
    |||||  |||| ||||| |||||||||||    
T  37011011 aggcctatttttttggcctggcctggcct 37010983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 32212260 - 32212358
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||| ||||||||  || |||||||||  |||||||||  ||||||  |||||||||||| |||| ||||||||||||| || | | ||||||||||    
T  32212260 tgagccgggcctatgacctttcataggcctattttcttggtctggcctaacctatttaaaagcctggtctggcctgaaagcttattcacaggcctactt 32212358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 25040312 - 25040255
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    |||||||||||||||| |||||||| |||| |||| |||| | |||||||||||||||    
T  25040312 taggggtgggaataggtcaggccagatcagactttgataggcttgagtctggcctacg 25040255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 41487467 - 41487616
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||||||  |||| ||  |       
T  41487467 aggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctatttttttaac--- 41487563  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
      ||| ||||||||||||||| | ||||||||||||| || ||| ||||||||||    
T  41487564 --ctgacctatttaaaagtctagcctggcctgaaagcctatttacaggcctactt 41487616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 5258756 - 5258812
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctac 98  Q
    ||||||||||||||||| ||| |||| |||||||| |||| |||||| |||||||||    
T  5258756 taggggtgggaataggctaggtcaggccaggctttgatagacctgagcctggcctac 5258812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 11845392 - 11845336
Alignment:
Q  158 tggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||||||||||||||| ||| ||||| ||||||| || ||| ||||||||||    
T  11845392 tggcctggcctatttaaaagtttggcctggcttgaaagcctatttaaaggcctactt 11845336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 35041807 - 35041768
Alignment:
Q  201 ttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  35041807 ttataggcctactttatattaaggtcatcaaatagttcat 35041768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 156
Target Start/End: Complemental strand, 20484401 - 20484363
Alignment:
Q  118 agcctggcctatggtctatcataggccgtttttcttggc 156  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20484401 agcctggcctatggcctatcataggtcgtttttcttggc 20484363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 39 - 240
Target Start/End: Original strand, 1101185 - 1101386
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| ||||||    
T  1101185 aattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatca 1101284  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttc 238  Q
    |||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  1101285 taggccgtttttttaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttc 1101384  T
Q  239 at 240  Q
    ||    
T  1101385 at 1101386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 32187408 - 32187210
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| || ||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  32187408 taggggtgggaataggccaggccaggccatgctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 32187309  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||| |||||| || ||||||||| ||||||| |||||||||||||||    
T  32187308 gccgtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctacttcatattaaggccatcaaatagttcat 32187210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 4174343 - 4174144
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||||||||||||| | |||||||| |||| |||||| |||||||||        | |||||| ||||||||||||| || ||||||||    
T  4174343 ttaggggtgggaataggccaggccatgccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctacggcctatcata 4174244  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||| || |||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||||||| |||||||||||||||    
T  4174243 ggccgtttttctaggcctgacctggcctatttaaaagtctggactggcctgaaagcctaattacaggcttacttcacattaaggccatcaaatagttcat 4174144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 13041820 - 13041621
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||       | |||||||| || ||||||||||| ||||||||    
T  13041820 ttaggggtgggaataggccaggccaggctaggctttgataggcctgagtctggcctacgaaataaatcacaagcttaagtctggcctatggcctatcata 13041721  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||  || |||| |||||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  13041720 ggccgtttttctaggtctgacctgacctatttaaaagcctggattggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 13041621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 34858146 - 34858326
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| ||||  ||||| ||||||||||       | |||||| |||||||||||||||| |||||||||||||||||||| ||| ||    
T  34858146 aggccaggccaggctttgataggtctgagcctggcctacgaaaaaaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctg 34858245  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||| |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||| |||||||||||||||    
T  34858246 gcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttcat 34858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 4229942 - 4229757
Alignment:
Q  55 aggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttg 154  Q
    ||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| ||||||||| |||||| |||||||||||||||||||| |    
T  4229942 aggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggtctatggcctatcataggccgtttttctag 4229843  T
Q  155 gcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    || || |||||||||||||||||  ||||||||||||||| | |||||| || ||||||||||||||||| |||||||||||||||    
T  4229842 gcctgacctggcctatttaaaagcatggactggcctgaaatcctacttacagacctacttcacattaaggccatcaaatagttcat 4229757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 1558606 - 1558799
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||       | |||||| ||||||||||||||||  ||||||||    
T  1558606 taggggtgggaataggtcaggccaggtcaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcttatcatag 1558705  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||      | ||||||||||||||| ||| |||||||||||||||||| |||||  ||||||||| |||||||||| |||||||||||||||    
T  1558706 gccgttttt-----ataggcctggcctatttataagcctggactggcctgaaagcctacttccaggcctactacacattaaggccatcaaatagttcat 1558799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 44 - 240
Target Start/End: Complemental strand, 479301 - 479105
Alignment:
Q  44 ggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggc 143  Q
    |||||||||||||| ||||||||  |||||||| |||| |||||| ||||||||||       ||||| || |||| |||||||||||||||||||||||    
T  479301 ggggtgggaataggtcaggccagaccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagtctggcctatggtctatcataggc 479202  T
Q  144 cgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||| ||| ||  ||||||||||||||||  |||||| |||||||||| || ||| | |||||||| ||||||||| |||||||||||||||    
T  479201 cgtttttctaggcctgatctggcctatttaaaagcatggacttgcctgaaagcctaattacatgcctacttaacattaaggccatcaaatagttcat 479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 17156229 - 17156422
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||||     ||| |||| |||||| ||||||||||       |||||||| |||| ||||||| ||| |||| ||||    
T  17156229 taggggtgggaataggccaggccaggt-----tttgataggcctgagcctggcctacgaaaaaatttacaagcctgagtctggcctgtggcctattatag 17156323  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||  ||| ||| |||||||||||| |||||||||||||||||| || ||| |||||||||||| ||||||| |||||||||||||||    
T  17156324 gccgtttttcttggtctggtctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcat 17156422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 28891036 - 28890860
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatc 137  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||    
T  28891036 taattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttc 28890937  T
Q  138 ataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  28890936 ataggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 28890860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 214
Target Start/End: Original strand, 13276559 - 13276732
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||    
T  13276559 ttagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcata 13276658  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  13276659 ggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 13276732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 5153316 - 5153488
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||   ||||| ||||||||||       || || ||||||||||||||||||| || ||||||    
T  5153316 tagggttgggaataggccaggccaggccaggctttgataagtctgagcctggcctacgaaaaattttgcaggcttgagcctggcctatggcctttcatag 5153415  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  5153416 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 5153488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 4111510 - 4111336
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||  || ||||    
T  4111510 attagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatgacctttcat 4111411  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||  || | ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  4111410 aggcctattattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 4111336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 3027408 - 3027236
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  3027408 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatag 3027309  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| || |||| |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  3027308 gcctattattttggcctgacctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 3027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 3729176 - 3729004
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || ||||||||||||| ||  | ||||||    
T  3729176 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctacggcatttcatag 3729077  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||| |||||||||||||||||||| ||||||||||||| || ||| || |||||||    
T  3729076 gcctatttttttggcctggcttggcctatttaaaagtctggtctggcctgaaagcctatttacagacctactt 3729004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 14500067 - 14500198
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||||| |||| ||| ||||||| |||||||||||||||||| | ||  ||| |||||||||||||||  ||||||||| |||||||| |||||| |||     
T  14500067 acaagcctgagtctgtcctatggcctatcataggccgtttttttaggtctggtctggcctatttaaaaacctggactggtctgaaagcctacttacaggt 14500166  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| ||||||||||| |||||||||||||||    
T  14500167 ctacatcacattaaggccatcaaatagttcat 14500198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 202
Target Start/End: Original strand, 32158082 - 32158177
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    |||||||  |||||||||||||||| |||||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||||| |||||    
T  32158082 ttacaagtctgagcctggcctatggcctatcataggccgtttttctaggtctggtctggcctatttaaaagtctggactggcctgaaagcttactt 32158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 27613293 - 27613447
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    ||||||||||| ||||| |||| |||||| ||| ||||||       || || || |||||||||||||||| || |||||||||  |||| ||||||||    
T  27613293 aggccaggtcaagctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcttg 27613392  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||| |||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  27613393 gccttgcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 27613447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 3257188 - 3257286
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| || |||||||||  |||| ||||| |||| |||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  3257188 tgagcctggcctatggcctttcataggcctatttttttggcctggcttggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 3257286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 8437696 - 8437570
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| ||| |||| |||| |||||||||||||||||       || || || |||||||||||||||| || ||||||    
T  8437696 tagggttgggaataggccaggccaggccagactttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 8437597  T
Q  142 gccgtttttcttggcttggcctggcct 168  Q
    |||  |||| ||||| |||||||||||    
T  8437596 gcctatttttttggcctggcctggcct 8437570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 211
Target Start/End: Complemental strand, 12297055 - 12296879
Alignment:
Q  37 ataattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctat 136  Q
    |||| ||||| |||||||||||||||||||| ||| |||| ||||  ||||||||||||||||       || || || | |||||||||||||| || |    
T  12297055 ataagtagggttgggaataggccaggccaggccagactttgataggtctgagtctggcctacgaaaaaatttgcaggcctaagcctggcctatggccttt 12296956  T
Q  137 cataggcc--gtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggccta 211  Q
    ||||||||   ||||| || || || |||  ||||||||||||||||| ||||||||||||| || ||| |||||||    
T  12296955 cataggcctattttttttttgcctgacctaacctatttaaaagtctggcctggcctgaaagcctatttacaggccta 12296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 11982470 - 11982389
Alignment:
Q  155 gcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    |||||| ||| |||||||||||| || |||| |||||||||| |||||  |||||||||| |||||||||||||||||||||    
T  11982470 gcttggtctgacctatttaaaagcctagactagcctgaaagcctacttcaaggcctactttacattaaggtcatcaaatagt 11982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 27797785 - 27797654
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    ||||||||||||| |||| |||||  ||||||||  |||||||||||||| | ||||| | ||||||||||||| ||||| | ||||||| ||||| |      
T  27797785 ttacaagcttgagtctggtctatgacctatcatataccgtttttcttggcctagcctgacttatttaaaagtctagactgacttgaaagcttactt-tca 27797687  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    | |||||| |||||||||||||| ||||||||||    
T  27797686 gactactt-acattaaggtcatctaatagttcat 27797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 33042849 - 33042940
Alignment:
Q  145 gtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    |||||||||||| ||| ||| |||||||||| || ||||||| ||||||||| |||||  | |||||| | ||||||||| |||||||||||    
T  33042849 gtttttcttggcctgggctgacctatttaaacgtatggactgacctgaaagcctacttccaagcctacattacattaaggccatcaaatagt 33042940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 31803234 - 31803068
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtt 147  Q
    |||||||||| ||| |||||||||||||| |||| | |||| ||| ||||||       || || |  |||||||||||||||| || |||||||||  |    
T  31803234 tgggaataggtcagaccaggtcaggctttgatagacttgagcctgacctacgaaaaaatttgcaggtctgagcctggcctatggcctttcataggcctat 31803135  T
Q  148 tttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||| ||||  | | |||||||||||||||| ||   ||||||||||||| || ||| ||||||||||    
T  31803134 ttttttggtcttgtctggcctatttaaaagcctaacctggcctgaaagcctatttacaggcctactt 31803068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 7458786 - 7458842
Alignment:
Q  108 tacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctg 164  Q
    ||||||| | |||||||||||||| ||||||||| |||||||||||||  |||||||    
T  7458786 tacaagcctaagcctggcctatggcctatcatagaccgtttttcttggtctggcctg 7458842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 11982547 - 11982508
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatag 81  Q
    |||||||||||||||||||||||||| ||| |||||||||    
T  11982547 taggggtgggaataggccaggccaggccagactttaatag 11982508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 24848888 - 24848945
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||| ||| |||||||||||| ||| ||| |||| |||| |||||||||||||||||    
T  24848888 tagggttggaaataggccaggcgaggccagactttgataggcctgagtctggcctacg 24848945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 1449860 - 1449808
Alignment:
Q  162 ctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| |||| ||||||| ||||| || ||| ||||||||||    
T  1449860 ctggcctatttaaaagcctggtctggcctaaaagcctatttacaggcctactt 1449808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 9283918 - 9283842
Alignment:
Q  158 tggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaata 234  Q
    ||||| ||||||||||||||||||| ||| |||  |||| || ||| ||||||| |||| ||||| ||||| |||||    
T  9283918 tggcccggcctatttaaaagtctggcctgccctagaagcctatttacaggcctatttcatattaaagtcattaaata 9283842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 2995168 - 2994969
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||||||||||||||  ||| |||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| ||||||||    
T  2995168 ttaggggtgggaataggccaggccagaccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcata 2995069  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  2995068 ggccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggtcatcaaatagttcat 2994969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 6431516 - 6431714
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| |||| |||| |||||||| |||| |||||| ||||||||||       | |||||| |||| ||||||||||| |||||||||    
T  6431516 taggggtgggaataggtcaggtcaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatggcctatcatag 6431615  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  |||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  6431616 gccgtttttctaggtctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggtctacttcacattaaggtcatcaaatagttcat 6431714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 29768289 - 29768487
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||||||| |||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| | ||| ||||||| || ||||||||    
T  29768289 ttaggggtggtaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctaagcttggccta-ggcctatcata 29768387  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||    
T  29768388 ggccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacatgcctacttcacattaaggccatcaaatagttcat 29768487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 35959329 - 35959527
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| || ||||| |||| |||||| ||||||||||       |||||||| |||||||||||| ||| |||| ||||    
T  35959329 taggggtgggaataggccaggccaggccaagctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattatag 35959428  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||  ||||||| |||||||||||| |||||||| ||||||||| |||||| |||||||||| | ||||||| |||||||||||||||    
T  35959429 gccgtttttcttggtctggcctgacctatttaaaagcctggactgacctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcat 35959527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 44092932 - 44092734
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||| ||| ||||  ||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  44092932 taggggtgggaataggccaggccaggccaggttttgataggtctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 44092833  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| ||||||| | | |||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||| ||||||||| |||||    
T  44092832 gccatttttctagacctggcctggcctatttaaaagcctggacttgcctgaaagcctacttataggcccacttcacattaaggccatcaaataattcat 44092734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 25879852 - 25879672
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    ||||||||||||||||| |||| ||||||  |||||||||       | |||||| | |||||||||||||  |||||||||||||||||||| ||| ||    
T  25879852 aggccaggtcaggctttgatagacctgagcttggcctacgaaataaatcacaagcctaagcctggcctatgacctatcataggccgtttttctaggcctg 25879753  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  25879752 gcctggcctatttaaaagtctggattggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 25879672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 42077016 - 42077147
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||| |||||| ||||    
T  42077016 acaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggtctggcctatttaaaagtctggactggtctgaaagcctacttacaggc 42077115  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||| |||||||||||||||    
T  42077116 ctacttcacattaaggccatcaaatagttcat 42077147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 29044105 - 29044296
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | ||||||| |||||||||||||       |||||    
T  29044105 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagctagagcctggcctat-------catag 29044197  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| ||||||| ||| || ||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||    
T  29044198 gccatttttctaggcctgacctggcctatttaaaagcctggactggcctgaaagcctacttacaggactacttcaaattaaggtcatcaaatagttcat 29044296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 2182845 - 2182645
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| ||||||||||||||| |||| ||| |||| |||| |||||| ||||||||||       | |||||  |||||||||||||| | |||||||    
T  2182845 attagggatgggaataggccaggtcaggccagactttgataggcctgagcctggcctacgaaataaatcacaagtctgagcctggcctatagcctatcat 2182746  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    ||||||||||||| ||| || | |||||||||||||||  ||||| ||||||||||| |||||| || ||||||||||||||||| ||||||||||||||    
T  2182745 aggccgtttttctaggcctgacttggcctatttaaaagcatggaccggcctgaaagcctacttacagacctacttcacattaaggccatcaaatagttca 2182646  T
Q  240 t 240  Q
    |    
T  2182645 t 2182645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 2611351 - 2611475
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||| ||||||||||| |||||||||||||||||| | ||  ||| |||||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  2611351 tgagtctggcctatggcctatcataggccgtttttttaggtctggtctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttc 2611450  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    ||||||||| |||||||||||||||    
T  2611451 acattaaggccatcaaatagttcat 2611475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 7298844 - 7299024
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    ||||||| ||||||||| |||| |||||||||||||||||       |||||||| |||| ||||||| ||| |||| ||||| ||||||||||||  ||    
T  7298844 aggccagatcaggctttgataggcctgagtctggcctacgaaaaaatttacaagcctgagtctggcctgtggcctattataggtcgtttttcttggtctg 7298943  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    || || || |||||||||||||||||||||||||||| |||||| | |||||||| | ||||||| |||||||||||||||    
T  7298944 gcttgaccgatttaaaagtctggactggcctgaaagcctacttacaagcctactttatattaaggccatcaaatagttcat 7299024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 6283428 - 6283561
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||| |||||||||||| ||| | || ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||| ||    
T  6283428 ttacaagcctgagcctggcctgtggccaattataggccgtttttcttggcctggcctgacctatttaaaagtctggactgacctgaaagcctacttacag 6283527  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||| | ||||||  |||||||||||||||    
T  6283528 gcctactttatattaagaccatcaaatagttcat 6283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 40737798 - 40737972
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||    
T  40737798 attagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcat 40737897  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  40737898 aggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 40737972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 29557413 - 29557587
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| || |||||||||||||||| ||||||||| |||| |||||| ||||||||||       || || || ||||||| |||||||| || ||||    
T  29557413 attagggctgtgaataggccaggccagatcaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctagcctatggcctttcat 29557512  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||  |||| ||||| ||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  29557513 aggcctatttttttggcatggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 29557587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 6420073 - 6419886
Alignment:
Q  50 ggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttt 149  Q
    |||||||| ||||||||| ||| |||| |||| |||||| ||||||||||       | |||||  |||||||||||||||| ||||| |||||||| ||    
T  6420073 ggaataggtcaggccaggccagactttgataggcctgagcctggcctacgaaataaatcacaagtctgagcctggcctatggcctatcgtaggccgtatt 6419974  T
Q  150 tcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagtt 237  Q
    ||| ||| || ||| ||||||||||||| |||||||| | ||||||  |||||| ||||||| |||||||||||| ||||||||||||    
T  6419973 tctaggcctgacctagcctatttaaaagcctggactgacatgaaagtctacttacaggcctaattcacattaaggccatcaaatagtt 6419886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 31452999 - 31452813
Alignment:
Q  49 gggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgttt 148  Q
    |||||||||||||| |||| ||| |||| |||| ||||||| |||||||||       |||||||  | ||| || ||||||| |||||||||| |||||    
T  31452999 gggaataggccaggtcaggccagactttgataggcctgagtttggcctacgaaataatttacaagtctaagcatgacctatggcctatcataggtcgttt 31452900  T
Q  149 ttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    |||||||| || |||| ||||||||||||||| ||||||||||||||| |||||  |||| ||||| ||||||||| |||||||||||    
T  31452899 ttcttggcctgacctgacctatttaaaagtct-gactggcctgaaagcctactttcaggcttactttacattaaggccatcaaatagt 31452813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 214
Target Start/End: Complemental strand, 34726452 - 34726277
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       ||||| || |||||||||||||||| || |||    
T  34726452 aattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttacaggcctgagcctggcctatggcctttca 34726353  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||  || | ||||| ||||||| |||||||||||| |||| ||| ||||||||| || ||| ||||||||||    
T  34726352 taggcctattattttggcctggcctgacctatttaaaagcctggcctgacctgaaagcctatttacaggcctactt 34726277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 177
Target Start/End: Complemental strand, 26260396 - 26260255
Alignment:
Q  36 cataattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtcta 135  Q
    ||||| ||||| ||||||||||||||| |||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||    
T  26260396 cataagtagggttgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggccta 26260297  T
Q  136 tcataggccgtttttcttggcttggcctggcctatttaaaag 177  Q
    ||||||||||||||||| ||| ||| |||| |||||||||||    
T  26260296 tcataggccgtttttctaggcctggtctggtctatttaaaag 26260255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 21198260 - 21198088
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  21198260 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 21198161  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| || || |||||||||||||||||||| |||  ||||||| ||||| || ||| ||||||||||    
T  21198160 gcctatttttttagcctggcctggcctatttaaaagcctgacctggcctaaaagcctatttacaggcctactt 21198088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 22440039 - 22439840
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| ||| ||||||||||| ||||  |||||||||||| || ||| |||   ||||       |||||||||||||||||| ||||||  ||||||    
T  22440039 attagggatggaaataggccaggtcaggctaggctttaataggcccgagcctgatttacgaaaaaatttacaagcttgagcctggtctatggcttatcat 22439940  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    ||| | ||||||||||| || |||| ||||||||||||  ||||||| ||||||| |||| ||||  |||||||| || |||||||||||||||||||||    
T  22439939 aggtcatttttcttggcctgacctgacctatttaaaagcatggactgacctgaaaacata-ttatcagcctactttacgttaaggtcatcaaatagttca 22439841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 12033948 - 12033777
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||| |||||||| ||| |||| |||| |||||| |||||||||        || || || |||||||||||||||| || ||||||    
T  12033948 tagggttgggaataggctaggccaggccagactttgataggcctgagcctggcctac-aaaaattttgcaggcctgagcctggcctatggcctttcatag 12033850  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| ||| ||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  12033849 gcctatttttttggcctggtctggcctatttaaaagtctggtctggcctgaaagcctatttacaggcctactt 12033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 12465756 - 12465858
Alignment:
Q  135 atcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaata 234  Q
    ||||||||||||||||||| || ||   || | ||||||||| ||||||||||||| ||||| |||||| ||| |||||| |||||||||||||||||||    
T  12465756 atcataggccgtttttctttgcatgatttgacgtatttaaaaatctggactggcctaaaagcctacttacaggtctactttacattaaggtcatcaaata 12465855  T
Q  235 gtt 237  Q
    |||    
T  12465856 gtt 12465858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 13029230 - 13029104
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  13029230 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 13029131  T
Q  142 gccgtttttcttggcttggcctggcct 168  Q
    |||  |||| ||||| |||||||||||    
T  13029130 gcctatttttttggcctggcctggcct 13029104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 18075834 - 18075733
Alignment:
Q  113 gcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctac 212  Q
    |||||||| |||||||||| || |||||| ||  |||| ||||| ||||||| ||||||||||||||||| ||||||||||||| || ||| ||||||||    
T  18075834 gcttgagcttggcctatggcctttcatagacctatttttttggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctac 18075735  T
Q  213 tt 214  Q
    ||    
T  18075734 tt 18075733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 43639038 - 43639171
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||| ||||||||  |||||| ||||||||| |||||||||||| | ||||||| | ||||||| ||||||| |||  |||||||| |||||  |     
T  43639038 ttacaagcctgagcctgatctatggcctatcatagaccgtttttcttgacatggcctgacgtatttaacagtctggcctgatctgaaagcctacttccaa 43639137  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
     |||| || | |||||||||||||||||||||||    
T  43639138 acctagtttaaattaaggtcatcaaatagttcat 43639171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 1834351 - 1834272
Alignment:
Q  161 cctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| |||||||||||| |||||||||||||||||| || ||| |||||||||| ||| ||||| |||||||||||||||    
T  1834351 cctgacctatttaaaagcctggactggcctgaaagcctaattacaggcctacttaacaataaggccatcaaatagttcat 1834272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 38213470 - 38213568
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| || |||||||||  |||| ||||| ||||||| ||||||||||||||||| ||| ||||||||| || ||| ||| ||||||    
T  38213470 tgagcctggcctatggcctttcataggcctatttttttggcctggcctgacctatttaaaagtctggcctgacctgaaagcctatttacaggtctactt 38213568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 15899760 - 15899632
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||| |||||||||||||||| |||||||||  |||||||||||||     ||| | ||||||||||||||| ||| ||||||||| ||| |  ||    
T  15899760 ttacaagcctgagcctggcctatggcctatcatagatcgtttttcttggc-----ctgacttatttaaaagtctggtctgacctgaaagcctacatccag 15899666  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
     |||| || ||||||| ||||| |||||||||||    
T  15899665 acctattttacattaaagtcattaaatagttcat 15899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 38446360 - 38446291
Alignment:
Q  133 ctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    |||||||||||||||||||| ||| ||| ||| ||||||||||||  ||||||||||||||||| |||||    
T  38446360 ctatcataggccgtttttctaggcctggtctgacctatttaaaagcttggactggcctgaaagcctactt 38446291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 17852868 - 17852818
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctac 98  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  17852868 tgggaataggccaggccaggtcagactttgataggcctgagtctggcctac 17852818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 6283332 - 6283418
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggccta 128  Q
    |||||||||||||||| ||||||||| ||| |||| |||| | |||||||||||||||       |||||||| |||||||||||||    
T  6283332 taggggtgggaataggtcaggccaggccagactttgataggcttgagtctggcctacgaaaaaatttacaagcctgagcctggccta 6283418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 38448156 - 38448062
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctat 136  Q
    ||||| || ||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| ||||    
T  38448156 tagggttgagaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctat 38448062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 36985510 - 36985447
Alignment:
Q  36 cataattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    |||| |||||| |||||||||||||||||||  |||||||| |||| |||||| ||||||||||    
T  36985510 catatttagggttgggaataggccaggccagaccaggctttgataggcctgagcctggcctacg 36985447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 43616404 - 43616454
Alignment:
Q  164 ggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  43616404 ggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 43616454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 32084238 - 32084181
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||| || ||||||||||||||||| ||| |||| |||| |||||||||||||||||    
T  32084238 tagggttgagaataggccaggccagggcagactttgataggcctgagtctggcctacg 32084181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 42516974 - 42517075
Alignment:
Q  133 ctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaa 232  Q
    ||||||||| |||||||||||||  ||| |||  |||||||||||  || |||| ||||||||| |||||  || ||||||| ||||||||| || ||||    
T  42516974 ctatcatagaccgtttttcttggtctggtctgaactatttaaaagcatgaactgccctgaaagcctacttccagacctactttacattaaggccaacaaa 42517073  T
Q  233 ta 234  Q
    ||    
T  42517074 ta 42517075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 26260250 - 26260210
Alignment:
Q  200 cttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  26260250 cttacaggcctacttcacattaaggccatcaaatagttcat 26260210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 39133299 - 39133374
Alignment:
Q  113 gcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggc 188  Q
    |||||||||||| |||||| || |||||||||  |||| ||||  ||| |||||||| |||||||||||| |||||    
T  39133299 gcttgagcctggtctatggcctttcataggcctattttgttggtctggtctggcctacttaaaagtctggcctggc 39133374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 17740569 - 17740528
Alignment:
Q  123 ggcctatggtctatcataggccgtttttcttggcttggcctg 164  Q
    ||||||||| |||||||||||||||||||||||  |||||||    
T  17740569 ggcctatggcctatcataggccgtttttcttggtctggcctg 17740528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 21806500 - 21806698
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||  |||||||| |||| |||||| ||||||||||       | ||||||||||| ||||||||||| |||||||||    
T  21806500 taggggtgggaataggccaggccagaccaggctttgataggcctgagcctggcctacgaaataaatcacaagcttgagtctggcctatggcctatcatag 21806599  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||    
T  21806600 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacatgcctacttcacattaaggccatcaaatagttcat 21806698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 46 - 240
Target Start/End: Complemental strand, 12419273 - 12419080
Alignment:
Q  46 ggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccg 145  Q
    |||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| ||||||||||||     
T  12419273 ggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggcc- 12419175  T
Q  146 tttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||||| |||| |||||||||||||||    
T  12419174 tttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttgcaggcctacttcacatcaaggccatcaaatagttcat 12419080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 41902962 - 41902764
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||||||||||   ||| |||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  41902962 tagggatgggaataggccaggccataccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 41902863  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  41902862 gccgtttttctaggcctggtctggcctatttaaaagcctggactagcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcat 41902764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 10227858 - 10228056
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||| ||||||||||||||||| ||| |||| |||| |||||| ||||||||||       | |||||| |||| ||||||||||  |||||||||    
T  10227858 taggggtgagaataggccaggccaggccagactttgataggcctgagcctggcctacgaaataaatcacaagcctgagtctggcctatgacctatcatag 10227957  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| ||||||| ||| || | |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||    
T  10227958 gccatttttctaggcatgacttggcctatttaaaagtctggactggcctgaaagcctacttacaggactacttcacattaaggtcatcaaatagttcat 10228056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 27595760 - 27595563
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| |||| |||||||| |||| |||| ||||||| ||| |||||       | |||||| |||||||| ||||||| ||||||||     
T  27595760 taggggtgggaataggtcaggtcaggtcagactttgataggcctgagtatggtctacgaaataaatcacaagcctgagcctg-cctatggcctatcatat 27595662  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  27595661 gccgtttttctaggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 27595563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 31377365 - 31377563
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||  ||||||||||       |||||||| | ||||| |||| ||| |||| |||     
T  31377365 taggggtgggaataggccaggccaggccaggctttgataggcctgaacctggcctacgaaaaaatttacaagcctaagcctagcctgtggcctattataa 31377464  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||    
T  31377465 gccgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggtcatcaaatagttcat 31377563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 13391057 - 13391252
Alignment:
Q  45 gggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggcc 144  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| |||||||||        | |||||| |||||||||||||||| |||||||||||     
T  13391057 gggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctatggcctatcataggct 13391156  T
Q  145 gtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
     ||||||| ||| ||||||| |||||||||||| || ||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||||||    
T  13391157 atttttctaggcatggcctgacctatttaaaagcctagactggcctgaaagcctacttacaggcctactacacattaaggccatcaaatagttcat 13391252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 46191793 - 46191594
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||| |||||| |||  |||||||| |||| |||||||||| ||||||       | ||||||||||||||||||||||| ||||||||    
T  46191793 ttaggggtgggaatacgccaggtcagaccaggctttgataggcctgagtctgacctacgaaataaatcacaagcttgagcctggcctatggcctatcata 46191694  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| ||||||| ||| || |||| ||||||||||||||| ||||||||||||||| |||||| | |||||||||||||||| | |||||||||||||||    
T  46191693 ggccatttttctaggcctgacctgacctatttaaaagtctagactggcctgaaagcctacttacaagcctacttcacattaaagccatcaaatagttcat 46191594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 23671270 - 23671077
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| ||| |||| |||| ||| |||||||||||||       | |||||| |||||||||||||||| |||||||||    
T  23671270 taggggtgggaataggccaggccaggccagactttgataggcctaagtctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 23671171  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    | | |||||     || |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||    
T  23671170 gtcattttt-----ctaggcctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcatattaaggttatcaaatagttcat 23671077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 2941253 - 2941050
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| ||| |||| |||| |||||| ||| |||||        | |||||| |||||||| ||||||| |||||||||    
T  2941253 taggggtgggaataggccaggccaggccagactttgataggcctgagcctgacctacaaaataaatcacaagcctgagcctgacctatggcctatcatag 2941154  T
Q  142 gccgtttttct-----tggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    || ||||||||     |||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  2941153 gctgtttttctaggcctggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagt 2941054  T
Q  237 tcat 240  Q
    ||||    
T  2941053 tcat 2941050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 240
Target Start/End: Complemental strand, 41631656 - 41631493
Alignment:
Q  77 aatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaa 176  Q
    ||||| |||||||||||||||||       | ||||||||||||||| ||||||  |||||||||||||||||||| ||| ||||||| |||||||||||    
T  41631656 aataggcctgagtctggcctacgaaataaatcacaagcttgagcctgacctatgacctatcataggccgtttttctaggcctggcctgacctatttaaaa 41631557  T
Q  177 gtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    | |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  41631556 gcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 41631493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 240
Target Start/End: Complemental strand, 43596293 - 43596099
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtt 147  Q
    |||||||||||||||||||| |||||||| |||| ||||||  |||||||||       | |||||| |||||||||||||||| ||||||||||  |||    
T  43596293 tgggaataggccaggccaggccaggctttgataggcctgagcttggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggttgtt 43596194  T
Q  148 tttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcaca--ttaaggtcatcaaatagttcat 240  Q
    ||||| ||| |||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||  |||||| |||||||||||||||    
T  43596193 tttctaggcctggcctggcctatttaaaatcctggactggcctgaaagcctacttacaggcctacttcacattttaaggccatcaaatagttcat 43596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 15757769 - 15757576
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||       | |||||| ||||||||||||||||  ||||||||    
T  15757769 taggggtgggaataggtcaggccaggtcaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcttatcatag 15757670  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||      | ||||||||||||||| ||| |||||||||||||||||| |||||  ||||||||| |||||||||| |||||||||||||||    
T  15757669 gccgttttt-----ataggcctggcctatttataagcctggactggcctgaaagcctacttccaggcctactacacattaaggccatcaaatagttcat 15757576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 21442082 - 21441889
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||     |||| ||||  || || ||||||||||       |||||||| | || ||||||||||| |||| ||||    
T  21442082 taggggtgggaataggccaggccagg-----ctttgataggtctaagcctggcctacgaaataaattacaagcctaagtctggcctatggcctattatag 21441988  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||    
T  21441987 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggtctacttcacattaaggccatcaaatagttcat 21441889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 2196039 - 2196242
Alignment:
Q  37 ataattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctat 136  Q
    |||||||||| |||||||||| ||||||||  ||| |||| |||| ||||| |||||||||||       | |||||  ||||||||||| |||| ||||    
T  2196039 ataattagggttgggaataggtcaggccagaccagactttgataggcctgaatctggcctacgaaataaatcacaagtctgagcctggccaatggcctat 2196138  T
Q  137 cataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    ||||| ||||| |||| ||  ||||||| |||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  2196139 catagaccgttgttctaggtctggcctgacctatttaaaagcctagactggcctgaaagtctacttataggcctacttcacattaaggccatcaaatagt 2196238  T
Q  237 tcat 240  Q
    ||||    
T  2196239 tcat 2196242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 44848016 - 44848176
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||  |||||| ||||||||||       | |||||| |||||||||||||||| ||||||||     
T  44848016 taggggtgggaataggccaggccaggccaggctttgataagcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataa 44848115  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    ||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||| |||||    
T  44848116 gccgtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctactt 44848176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 5667150 - 5667274
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||||| || |||||| |||||||||||||||||||| ||| |||||||| ||||||||||| |||||||| ||||||||| |||||| |||||||||||    
T  5667150 tgagccaggtctatggcctatcataggccgtttttctaggcctggcctggtctatttaaaagcctggactgacctgaaagcctacttacaggcctacttc 5667249  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    ||||||||| |||||||||||||||    
T  5667250 acattaaggccatcaaatagttcat 5667274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 45470411 - 45470287
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||| ||||||||||| ||||||||||| |||||||| ||  ||||||| |||||||||||| |||||||||||| ||||| |||||| |||||||||||    
T  45470411 tgagtctggcctatggcctatcataggctgtttttctaggtctggcctgacctatttaaaagcctggactggccttaaagcctacttacaggcctacttc 45470312  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||||||||||    
T  45470311 acattaaggtcatcaaatagttcat 45470287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 32584885 - 32585016
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||||| ||||||||| |||| | |||||||||||||||||||| ||  ||||||| |||||||||||| |||||||||||| ||||| |||||| ||||    
T  32584885 acaagcctgagcctggactatagcctatcataggccgtttttctaggtctggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggc 32584984  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||| |||||||||||||||    
T  32584985 ctacttcacattaaggccatcaaatagttcat 32585016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 2732290 - 2732462
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       ||||| || |||||||||||||||| || ||||||    
T  2732290 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctttcatag 2732389  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  2732390 gcctattattttggcctggcctggcctatttaaaagcctggtctggcctgaaagcctatttacaggcctactt 2732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 15943243 - 15943071
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  15943243 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 15943144  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  15943143 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 15943071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 214
Target Start/End: Complemental strand, 1411649 - 1411474
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||| |||||||| |||| ||||||  |||||||||       || || || ||||||||||||||||||| |||    
T  1411649 aattagggttgggaataggccaggccaggccaggctttgataggcctgagcttggcctacgaaaaattttgcaggcctgagcctggcctatggtctttca 1411550  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||  |||| ||||| ||| |||| |||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  1411549 taggcctatttttttggcctggtctggtctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 1411474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 214
Target Start/End: Original strand, 41892120 - 41892295
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||| ||| |||| |||| |||||| ||||| ||||       || ||||| |||||||||||||||| || |||    
T  41892120 aattagggttgggaataggccaggccaggccagactttgataggcctgagcctggcttacgaaaaaatttgcaagcctgagcctggcctatggcctttca 41892219  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||| ||||| || || ||||||||||||||||||||||||| ||||||||||||| || ||  ||||||||||    
T  41892220 taggccttttttttttgcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttgcaggcctactt 41892295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 11410521 - 11410693
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  11410521 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatag 11410620  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| ||||||| ||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  11410621 gcctattattttggcctggcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 11410693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 44410085 - 44409975
Alignment:
Q  126 ctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggt 225  Q
    |||||| ||||||||| ||||||||||||| ||| ||||  |||||||||||||||||||| ||||||||| |||||  ||||||||||  |||||||||    
T  44410085 ctatggcctatcatagaccgtttttcttggtttgacctgatctatttaaaagtctggactgccctgaaagcctacttccaggcctacttttcattaaggt 44409986  T
Q  226 catcaaatagt 236  Q
    |||||||||||    
T  44409985 catcaaatagt 44409975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 48829224 - 48829337
Alignment:
Q  127 tatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtc 226  Q
    ||||| |||||||||||||||||||| ||  ||| || ||||||||||||| |||||||| ||||||||| |||||||||| ||  |||||||||| | |    
T  48829224 tatggcctatcataggccgtttttctaggtctggtctagcctatttaaaagcctggactgacctgaaagcctacttataggtctgtttcacattaaagcc 48829323  T
Q  227 atcaaatagttcat 240  Q
    ||||||||||||||    
T  48829324 atcaaatagttcat 48829337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 203
Target Start/End: Complemental strand, 34521369 - 34521207
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| ||||||||||||||| |||| |||||||| |||| |||||| ||| ||||||       || || || |||||||||||||||| || |||||    
T  34521369 ttagggttgggaataggccaggtcaggccaggctttgataggcctgagcctgacctacgaaaaaatttgcaggcctgagcctggcctatggcctttcata 34521270  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactta 203  Q
    ||||  || | ||||| ||||||| |||||||||||| |||| ||| ||||||||| ||||||    
T  34521269 ggcctattattttggcctggcctgacctatttaaaagcctggcctgacctgaaagcctactta 34521207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 14776310 - 14776181
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||    
T  14776310 aattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttca 14776211  T
Q  139 taggccgtttttcttggcttggcctggcct 168  Q
    ||||||  |||| ||||| |||||||||||    
T  14776210 taggcctatttttttggcctggcctggcct 14776181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 240
Target Start/End: Original strand, 43341259 - 43341377
Alignment:
Q  122 tggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacatta 221  Q
    |||||||||  |||||||||||||||||||||||| ||| ||| ||||| ||||||||||||||| ||| ||||| | |||  || ||||||| ||||||    
T  43341259 tggcctatgacctatcataggccgtttttcttggcatggtctgacctatgtaaaagtctggactgacctaaaagcctgcttccagacctactttacatta 43341358  T
Q  222 aggtcatcaaatagttcat 240  Q
    ||| ||||  |||||||||    
T  43341359 aggccatcggatagttcat 43341377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 240
Target Start/End: Complemental strand, 33450306 - 33450174
Alignment:
Q  108 tacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatagg 207  Q
    ||||||| | ||||| |||||||| ||||||||| |||||||||||||| || |||| |||||| ||||| |||   |||||||||||| || ||  | |    
T  33450306 tacaagcctaagcctagcctatggcctatcatagaccgtttttcttggcctgacctgacctattaaaaagcctgtcttggcctgaaagcctaatttgaag 33450207  T
Q  208 cctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| || |||||| ||||||||||||||||||    
T  33450206 cctatttaacattatggtcatcaaatagttcat 33450174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 48214137 - 48214215
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaa 194  Q
    |||||||||||||||| || |||||||||  |||| ||||| ||||||||||||||||||||||||  |||||||||||    
T  48214137 tgagcctggcctatggcctttcataggcctatttttttggcctggcctggcctatttaaaagtctgccctggcctgaaa 48214215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 3356960 - 3357086
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       ||  | || |||||||||||||||| || ||||||    
T  3356960 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgaaggcctgagcctggcctatggcctttcatag 3357059  T
Q  142 gccgtttttcttggcttggcctggcct 168  Q
    |||  |||| ||||| |||||||||||    
T  3357060 gcctatttttttggcctggcctggcct 3357086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 37807032 - 37807130
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| || |||||||||  |||| ||||  ||| ||| ||||||||||| ||||| ||||||||||||| || ||| ||||||||||    
T  37807032 tgagcctggcctatggcctttcataggcctatttttttggtctggtctgacctatttaaaaatctggtctggcctgaaagcctatttacaggcctactt 37807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 41399834 - 41399709
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| | |||||| |||| |||||| ||||||||||       || || || | ||||||||||||||||| ||||||    
T  41399834 tagggttgggaataggccaggccaggcc-ggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggtctttcatag 41399736  T
Q  142 gccgtttttcttggcttggcctggcct 168  Q
    |||  |||| ||||| |||||||||||    
T  41399735 gcctatttttttggcctggcctggcct 41399709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 24422026 - 24421884
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||||||||||||||| ||| |||| |||||||| |||| ||||||  ||||| |||       || ||||| |||||||||||||||| || |||    
T  24422026 aattaggggtgggaataggcgaggtcaggccaggctttgataggcctgagcatggccgacgaatttttttgcaagcgtgagcctggcctatggcctttca 24421927  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctgg 182  Q
    | |||| | ||| ||||  ||| |||||||||||||| ||||||    
T  24421926 tgggcc-tattttttggtctggtctggcctatttaaaggtctgg 24421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 34002898 - 34002784
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||| |||||||||||||| |||||  |||||||| |||| | |||||| |||||||        |||||||| |||||||||||||||  |||| ||||    
T  34002898 taggcgtgggaataggccaagccagaccaggctttgataggcttgagtcaggcctacaaaaaaatttacaagcctgagcctggcctatgacctattatag 34002799  T
Q  142 gccgtttttcttggc 156  Q
    |||| ||||||||||    
T  34002798 gccgattttcttggc 34002784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 18533470 - 18533317
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| |||| |||||| ||||||||||       || ||  | ||||||| |||||||  || |||||||||  |||| ||||||||    
T  18533470 aggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcagacctgagcctagcctatgacctttcataggcctatttttttggcttg 18533371  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctact 213  Q
    | ||| ||||||||||||  ||| ||||||||||||| || ||| ||| |||||    
T  18533370 gtctgacctatttaaaagcatggtctggcctgaaagcctatttacaggtctact 18533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 31673603 - 31673710
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    ||||| |||||||| | |||||||  || |||||||||  |||| || |  || |||||||||||||||||||||| ||||||||||| | || ||| ||    
T  31673603 ttacaggcttgagcttagcctatgacctttcataggcctattttttttgtctgacctggcctatttaaaagtctggcctggcctgaaaacctatttacag 31673702  T
Q  207 gcctactt 214  Q
    ||||||||    
T  31673703 gcctactt 31673710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 28489308 - 28489354
Alignment:
Q  110 caagcttgagcctggcctatggtctatcataggccgtttttcttggc 156  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  28489308 caagcttgagcctagcctatggcctatcatagaccgtttttcttggc 28489354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 12077201 - 12077256
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggccta 97  Q
    ||||| |||||||||||||||||||| ||| |||| |||| |||| ||||||||||    
T  12077201 tagggttgggaataggccaggccaggccagactttgataggcctgggtctggccta 12077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 44848169 - 44848202
Alignment:
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||| |||||||||||||||    
T  44848169 gcctacttcacattaaggccatcaaatagttcat 44848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 222
Target Start/End: Complemental strand, 26574196 - 26574140
Alignment:
Q  166 cctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaa 222  Q
    ||||||||||||||| | ||||||||||| | || ||| ||| ||||||||||||||    
T  26574196 cctatttaaaagtctagtctggcctgaaaacctatttacaggtctacttcacattaa 26574140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 36820992 - 36820936
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggccta 97  Q
    |||||| |||||||||||||||||||  |||||||| |||| ||||||  |||||||    
T  36820992 ttagggttgggaataggccaggccagaccaggctttgataggcctgagcttggccta 36820936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 18158378 - 18158576
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||| ||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  18158378 tagggttgggaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 18158477  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  18158478 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 18158576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 40083983 - 40084181
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  40083983 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 40084082  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||| ||||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  40084083 gccgtttttctaggcctggcctggtctatttaaaagcctggattggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 40084181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 10017763 - 10017961
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       |||||||| |||||||||||| |||||||| ||||    
T  10017763 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggtctattatag 10017862  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
     |||||||||||||| ||||||| |||||||||||| |||||||||||||||||| || ||| | |||||||||| ||||||| |||||||||||||||    
T  10017863 accgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacatgcctacttcatattaaggccatcaaatagttcat 10017961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 41 - 240
Target Start/End: Complemental strand, 14949649 - 14949450
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||||| ||||||||| |||||||| ||||  ||||| ||||||||||       |||||||| |||||||||||| ||| |||| |||    
T  14949649 ttaggggtgggaataggtcaggccaggccaggctttgataggtctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattata 14949550  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||||| | |||||||| | ||||||| |||||||||||||||    
T  14949549 ggccgtttttcttggcctggtctgacctatttaaaagtctggactgacctgaaagcctacttacatgcctactttatattaaggccatcaaatagttcat 14949450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 15397561 - 15397755
Alignment:
Q  46 ggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccg 145  Q
    |||||||||||| ||||||||| ||| |||| ||||  ||||| ||||||||||       | |||||||||||| |||||||||| ||||||||| | |    
T  15397561 ggtgggaataggtcaggccaggccagactttgataggtctgagcctggcctacgaaataaatcacaagcttgagcttggcctatggcctatcatagactg 15397660  T
Q  146 tttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||| |||||||||||||||| ||||||| | |||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  15397661 tttttctaggcttggcctggcctagttaaaagcccggactggcctgaaagcctacttatagacctacttcacattaaggccatcaaatagttcat 15397755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 38254693 - 38254891
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| ||| |||| |||| |||||| ||||||||||       | |||||  |||||||||||||||| |||||||||    
T  38254693 taggggtgggaataggccaggccaggccagactttgataggcctgagcctggcctacgaagtaaatcacaagtctgagcctggcctatggcctatcatag 38254792  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||  ||  || |||||||||||||||||  ||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||||    
T  38254793 gccgtttttccaggtctgacctggcctatttaaaagcttggactggcctgaaagcctacttacatgcctacttcatattaaggtcatcaaatagttcat 38254891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 13916829 - 13916696
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||| |||||||||||| ||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  13916829 ttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttatag 13916730  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| |||| |  ||||||||||||||||||||||    
T  13916729 gccgactttatgttaaggtcatcaaatagttcat 13916696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 18295184 - 18295375
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||| |||||||| |||| |||| ||| |||| |||| | |||||||||||||||       | |||||||||||||||||||||       |||||    
T  18295184 taggggtaggaataggtcaggtcaggccagactttgataggcttgagtctggcctacgaaataaatcacaagcttgagcctggcctat-------catag 18295276  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  18295277 gccgtttttctaggtctggcctgacctatttaaaagtctggattggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcat 18295375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 34855342 - 34855510
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| | |||| ||||||||||       |||||||| |||||||||||| ||| |||| |||||| |||||||||||| ||||||| |||    
T  34855342 caggctttgataggcttgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggctgtttttcttggcctggcctgacct 34855441  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagtt 237  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||| | ||||||||||||||||||||    
T  34855442 atttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggtcatcaaatagtt 34855510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 240
Target Start/End: Complemental strand, 27054594 - 27054423
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||| ||||||||| ||| ||| |||||||    
T  27054594 caggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggtcgtttttctaggcctggtctggcct 27054495  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||   ||||||||||||||    
T  27054494 atttaaaagcctggactgacctgaaagcctacttacaggcctacttcacattaagactatcaaatagttcat 27054423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 240
Target Start/End: Complemental strand, 15678217 - 15678103
Alignment:
Q  126 ctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggt 225  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||| |||||| |||||||||| |||||| |||| |||||||||||||||     
T  15678217 ctatggtctatcataggccgtttttctaggtctggcctggcctatttaaaagtttggactagcctgaaagcctacttacaggcttacttcacattaaggc 15678118  T
Q  226 catcaaatagttcat 240  Q
    |||||||||||||||    
T  15678117 catcaaatagttcat 15678103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 17870160 - 17869972
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||     |||| |||| |||||| ||||||||||       | |||||| | |||||||||||||| |||| ||||    
T  17870160 taggggtgggaataggccaggccagg-----ctttgataggcctgagcctggcctacgaaataaatcacaagcctaagcctggcctatggcctattatag 17870066  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||     || |||||| |||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  17870065 gccgttttt-----ctaggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 17869972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 240
Target Start/End: Complemental strand, 3881152 - 3880997
Alignment:
Q  85 tgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggac 184  Q
    |||||||||||||||       |||||||| |||||||||||| ||| |||| ||||||||||||||||||| || |||| |||||||||||| ||||||    
T  3881152 tgagtctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattataggccgtttttcttggcctgacctgacctatttaaaagcctggac 3881053  T
Q  185 tggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| |||||| | |||||||| | ||||||  |||||||||||||||    
T  3881052 tggcctgaaagcctacttacaagcctactttatattaagaccatcaaatagttcat 3880997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 27332621 - 27332423
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||  |||||||| | |  |||||| ||||||||||        ||||||| | |||||||||||||| |||||||||    
T  27332621 tagggttgggaataggccaggccagaccaggctttgaaatgcctgagcctggcctacgaaaaattatacaagcctaagcctggcctatggcctatcatag 27332522  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| ||||||||||| || ||||||||||| ||||| |||| ||||||||||||| ||| |  | ||||| || |||||| ||||||||||||||||||    
T  27332521 gccttttttcttggcctgacctggcctattaaaaagcctggtctggcctgaaagcctaccttgaagcctatttaacattatggtcatcaaatagttcat 27332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 42062431 - 42062258
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||    
T  42062431 ttagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcata 42062332  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
     |||  |||| ||||| ||||||| |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  42062331 agcctatttttttggcctggcctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 42062258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 240
Target Start/End: Complemental strand, 28210354 - 28210237
Alignment:
Q  123 ggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaa 222  Q
    ||||||||| |||||||||||| ||||||| ||  || || ||||||||||||||||||||||||||||||||| || ||| |||||||||| |||||||    
T  28210354 ggcctatggcctatcataggccatttttctaggtctgaccaggcctatttaaaagtctggactggcctgaaagcctaattacaggcctacttaacattaa 28210255  T
Q  223 ggtcatcaaatagttcat 240  Q
    || |||||||| ||||||    
T  28210254 ggccatcaaatcgttcat 28210237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 370230 - 370354
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||| ||||||||||| |||||||| ||||||||||| ||| ||  |||||||||||||||| |||||||||||||||||  || ||| ||||||||||     
T  370230 tgagtctggcctatggcctatcatatgccgtttttctaggcctgatctggcctatttaaaagcctggactggcctgaaagtctaattacaggcctactta 370329  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    ||||||||  |||||||||||||||    
T  370330 acattaagaccatcaaatagttcat 370354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 11877461 - 11877622
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| |||||||||| ||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||| ||||||| ||||||||    
T  11877461 ttagggttgggaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcata 11877560  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    |||||||||||| ||  || |||| |||||||||||| ||  |||||||||||||| |||||    
T  11877561 ggccgtttttctaggtctgacctgacctatttaaaagcctaaactggcctgaaagcctactt 11877622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 31271557 - 31271385
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| ||| || ||||||||||       ||  | || |||||||||||||||| || ||||||    
T  31271557 tagggttgggaataggccaggccaggccaggctttgataggcctaagcctggcctacgaaaaaatttgtaggcctgagcctggcctatggcctttcatag 31271458  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||  |||||| |||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  31271457 gcctatttttttggactggcctagcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 31271385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 31624210 - 31624339
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||||| |||| ||||||||||| ||||||||||||||||  || ||| |   ||||| ||||||||||  ||||||| ||||||||| |||||| ||||    
T  31624210 acaagcctgagtctggcctatggcctatcataggccgttt--ctaggcctaatctggcatatttaaaagcttggactgacctgaaagcttacttacaggc 31624307  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||| |||||||||||||||||||||||||    
T  31624308 ctactttacattaaggtcatcaaatagttcat 31624339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 36113152 - 36113285
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||| |||    
T  36113152 caggctttgatagacctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggcctgacct 36113251  T
Q  169 atttaaaagtctggactggcctgaaagcatactt 202  Q
    ||||||||| ||||||| || ||||||| |||||    
T  36113252 atttaaaagcctggactagcttgaaagcctactt 36113285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 6644281 - 6644127
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||| ||||  ||||||||||||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  6644281 tagggttgggaataggccagaccagaccaggctttaataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 6644182  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagc 196  Q
    |||  |||| ||||| ||||||| |||||||||||| |||  ||| |||||||||    
T  6644181 gcctatttttttggcctggcctgacctatttaaaagcctgacctgacctgaaagc 6644127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 9163426 - 9163554
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||    
T  9163426 attagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcat 9163525  T
Q  140 aggccgtttttcttggcttggcctggcct 168  Q
    |||||  |||| ||||| |||||||||||    
T  9163526 aggcctatttttttggcctggcctggcct 9163554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 4101183 - 4101351
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccg-- 145  Q
    ||||||||||||||| |||| |||||||| |||| |||||||||| ||||||       || || || |||||||| ||||||| || |||||||||       
T  4101183 tgggaataggccaggtcaggccaggctttgataggcctgagtctgacctacgaaaaattttgcaggcctgagcctgacctatggcctttcataggcctat 4101282  T
Q  146 tttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||| |||| |||| || ||||||||||||| |||| ||||||||||||| || ||| | ||||||||    
T  4101283 ttttttttggattggtctagcctatttaaaagcctggcctggcctgaaagcctatttacaagcctactt 4101351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 4049569 - 4049393
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatc 137  Q
    ||||||||| |||||||||| ||||||||| ||  |||| ||||  |||||| || ||||||       || || || |||||||||||||||  || ||    
T  4049569 taattagggttgggaataggtcaggccaggccacactttgataggtctgagtttgacctacgaaaaaatttgcaggcctgagcctggcctatgacctttc 4049470  T
Q  138 ataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||| ||  |||| ||||| ||  ||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  4049469 atagacctatttttttggcctgatctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 4049393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 858720 - 858836
Alignment:
Q  126 ctatggtctatcataggccgtttttcttg-----gcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacatt 220  Q
    |||||| |||||||||| |||||||||||     || |||||||||||||| |||||||||| || |||||||||| |||||  || |||| || |||||    
T  858720 ctatggcctatcataggtcgtttttcttgatctggcctggcctggcctattaaaaagtctggtctagcctgaaagcttacttccagacctattttacatt 858819  T
Q  221 aaggtcatcaaatagtt 237  Q
    || ||||||||||||||    
T  858820 aaagtcatcaaatagtt 858836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 12880469 - 12880585
Alignment:
Q  52 aataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttc 151  Q
    |||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||  || |||||||||  ||||     
T  12880469 aataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatgacctttcataggcctattttt 12880568  T
Q  152 ttggcttggcctggcct 168  Q
    ||||  |||||||||||    
T  12880569 ttggtctggcctggcct 12880585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 214
Target Start/End: Complemental strand, 42288605 - 42288459
Alignment:
Q  63 ccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcc 162  Q
    ||||| |||||||| |||| |||||||||||||||||       || || || |||||||||||||||| || |||||| ||  |||| |||||     |    
T  42288605 ccaggccaggctttgataggcctgagtctggcctacgaaaaaaattgcaggcctgagcctggcctatggcctttcatagacctatttttttggc-----c 42288511  T
Q  163 tggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    | |||||||||||||||||| |||| |||||| | || ||| ||||||||||    
T  42288510 tcgcctatttaaaagtctggtctggtctgaaaacctatttacaggcctactt 42288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 491253 - 491310
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||| |||||||||||||||||||| |||||||| |||| ||| || ||||||||||    
T  491253 tagggttgggaataggccaggccaggccaggctttgataggcctaagcctggcctacg 491310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 491340 - 491401
Alignment:
Q  153 tggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||| |||||||||||||||||||| |||  ||||||||||||| || ||| ||||||||||    
T  491340 tggcctggcctggcctatttaaaagcctgacctggcctgaaagcctatttacaggcctactt 491401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 7035162 - 7035264
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||| || ||| ||||||||||||| ||||  ||||||||||||||||       || || || |||||||||||||||| || ||||||    
T  7035162 tagggttgggaatatgctaggtcaggtcaggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 7035261  T
Q  142 gcc 144  Q
    |||    
T  7035262 gcc 7035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 14084461 - 14084420
Alignment:
Q  162 ctggcctatttaaaagtctggactggcctgaaagcatactta 203  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  14084461 ctggcctatttaaaagtctggtctggcctgaaagcctactta 14084420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 14084573 - 14084526
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgag 88  Q
    |||||| || |||||||||||||||||||||||||| |||| ||||||    
T  14084573 ttagggttgagaataggccaggccaggtcaggctttgataggcctgag 14084526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 14084529 - 14084455
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcct 190  Q
    |||||||| | ||||| || |||||||||  |||| ||||  |||| |||||||||||||||||||| |||||||    
T  14084529 tgagcctgacgtatggcctttcataggcctatttttttggtctggcatggcctatttaaaagtctggtctggcct 14084455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 10931614 - 10931675
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||||||| |||||||||||| || |||| |||  ||| |||| |||||||||||||||||    
T  10931614 taattagggttgggaataggcctggtcaggccagattttgataggcctgagtctggcctacg 10931675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 36113278 - 36113311
Alignment:
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||| |||||||||||||||    
T  36113278 gcctacttcacattaaggccatcaaatagttcat 36113311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 12724936 - 12724884
Alignment:
Q  162 ctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||| ||||||||||| ||||||||||||| || ||| |||| |||||    
T  12724936 ctggcctatctaaaagtctggtctggcctgaaagcctatttacaggcatactt 12724884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 32253354 - 32253286
Alignment:
Q  110 caagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagt 178  Q
    ||||| ||||||| |||||||||||||||||||||  |||| ||||  ||| || ||||| ||||||||    
T  32253354 caagcctgagccttgcctatggtctatcataggcctatttttttggtctggtctagcctaattaaaagt 32253286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 12298134 - 12298332
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||  ||| ||| |||| |||||||||||||||||       | |||||| ||||||||||| |||| |||||||||    
T  12298134 taggggtgggaataggccaggccaggctaggttttgataggcctgagtctggcctacgaaaaaaatcacaagcctgagcctggccaatggcctatcatag 12298233  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  12298234 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 12298332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 5500084 - 5499886
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||| ||||| ||||||||     
T  5500084 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcttatggcctatcataa 5499985  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  5499984 gccgtttttctaggcctggcttggcctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 5499886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 10805017 - 10805215
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| | |||| ||||||||||       |||||||| |||||||||||| ||| |||| ||||    
T  10805017 taggggtgggaataggccaggccaggccaggctttgataggcatgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattatag 10805116  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| || ||| |||||||||||| ||||||| |||||||||||||||    
T  10805117 gccgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcat 10805215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 13077294 - 13077492
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||| |||| ||| |||| |||| |||||| || |||||||       | |||||| |||||||||||||||| |||||||||    
T  13077294 taggggtgggaataggccaggtcaggccagactttgataggcctgagcctagcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 13077393  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||    
T  13077394 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttcat 13077492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 16452385 - 16452583
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| || ||||| |       | ||||||||||||||||||||||| |||||||||    
T  16452385 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctagcctatgaaataaatcacaagcttgagcctggcctatggcctatcatag 16452484  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||  || | |  |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  16452485 gccgtttttctgagccttgtgtggcctatttaaaagtttggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcat 16452583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 16461537 - 16461735
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| || ||||| |       | ||||||||||||||||||||||| |||||||||    
T  16461537 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctagcctatgaaataaatcacaagcttgagcctggcctatggcctatcatag 16461636  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||  || | |  |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  16461637 gccgtttttctgagccttgtgtggcctatttaaaagtttggactggcctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcat 16461735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 39919604 - 39919802
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||  |||||||||    
T  39919604 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatgacctatcatag 39919703  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||| |||||| | |||||||||||||||| | |||||||||||||||    
T  39919704 gccgtttttctaggtctggcctgacctatttaaaagtctggactggcctgaaagcctacttacatgcctacttcacattaaagccatcaaatagttcat 39919802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 18342558 - 18342756
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||| ||||  ||| |||| |||| | |||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  18342558 taggggtgggaataggccagaccagaccagactttgataggcttgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 18342657  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||    
T  18342658 gccgtttttctaggcctgtcctggcctatttaaaagtctggactggcctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttcat 18342756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 26257390 - 26257588
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||| |||| |       | |||||| |||||||||||||||| |||||||||    
T  26257390 taggggtgggaataggccaggccagatcaggctttgataggcctgagtctgacctatgaaataaatcacaagcctgagcctggcctatggcctatcatag 26257489  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||| ||| |||||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  26257490 gccgtttttctaggtctggtctgacctatttaaaagcctggactggtctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 26257588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 38672256 - 38672058
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||  ||||| |||| ||| |||| |||||| ||||||| ||       | |||||| |||||||||||||||| |||||||||    
T  38672256 taggggtgggaataggccaaaccaggccaggttttgataggcctgagcctggccttcgaaataaatcacaagcctgagcctggcctatggcctatcatag 38672157  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  38672156 gccgtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 38672058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 23555745 - 23555944
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnt-tacaagcttgagcctggcctatggtctatcata 140  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||       | ||||||| |||||||||||| ||| |||| |||    
T  23555745 taggggtgggaataggccaggccaggtcaggctttgataggcctgagcctggcctacgaaaaaaatatacaagcctgagcctggcctgtggcctattata 23555844  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||| ||||||  ||||||| |||||||||||| |||||||||||| ||||| |||||| |||||||||| | |||||||||||||||||||||||    
T  23555845 ggccgtttatcttggtctggcctgacctatttaaaagcctggactggcctaaaagcctacttacaggcctactttatattaaggtcatcaaatagttcat 23555944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 42384205 - 42384398
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||      |||| |||| |||||| ||| ||||||       | |||||| |||||||||||||||| |||||||||    
T  42384205 taggggtgggaataggccaggccaga-----ctttgataggcctgagcctgacctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 42384299  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  42384300 gccgtttttctaggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 42384398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 43 - 240
Target Start/End: Original strand, 15849814 - 15850011
Alignment:
Q  43 aggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatagg 142  Q
    ||||||||||||||||||||||||| |||| ||| |||| |||||||||||||||||       | |||||| |||||||||||||||  ||||| ||||    
T  15849814 aggggtgggaataggccaggccaggccaggatttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggcctatgacctatcctagg 15849913  T
Q  143 ccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    || ||||||| ||  ||||||| |||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||| |||||||||||||||    
T  15849914 ccatttttctaggtctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggactacttcacattaaggccatcaaatagttcat 15850011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 43 - 240
Target Start/End: Complemental strand, 44779600 - 44779403
Alignment:
Q  43 aggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatagg 142  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||| ||| |||| |       | |||||| ||||||||||||||||  |||||||||    
T  44779600 aggggtgggaataggccaggccaggccaggctttgataggcctgagcctgacctatgaaataaatcacaagcctgagcctggcctatggcttatcatagg 44779501  T
Q  143 ccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||| ||  ||| ||| |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  44779500 ccgtttttctaggtctggtctgacctatttaaaagcctggactggtctgaaagcctacttataggcctacttcacattaaggccatcaaatagttcat 44779403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 15322024 - 15321824
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||| ||||||||||       |||||||| |||||||||| | ||| |||| ||    
T  15322024 attaggggtgggaataggccaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcatgtggcctattat 15321925  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||| | |||||||| |||||| |||||||||| | ||||||| ||||||||||||||    
T  15321924 aggccgtttttcttggtctggcctgacctatttaaaagtctggactagtctgaaagcctacttacaggcctactttatattaaggccatcaaatagttca 15321825  T
Q  240 t 240  Q
    |    
T  15321824 t 15321824  T

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Target: chr1; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 10311990 - 10312188
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||| ||||  ||||||| |||| |||||| |||||||||        |||||||| |||||||||||| ||| |||| ||||    
T  10311990 taggggtgggaataggccaggtcaggctaggctttgataggcctgagcctggcctacaaaaaaaattacaagcctgagcctggcctgtggcctataatag 10312089  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| |||||||  ||||||||||| |||||||||||||||||| |||||| |||||||||| | ||||||| |||||||||||||||    
T  10312090 gccgtttttcttggcctggcctgatctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcat 10312188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 39 - 240
Target Start/End: Complemental strand, 42650163 - 42649962
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||||||||||||||||||||||||||  | ||||| |||| |||||| || |||||||       ||||| || |||||||||||||||  ||||||    
T  42650163 aattaggggtgggaataggccaggccaggctaagctttgataggcctgagcctagcctacgaaaaaatttacaggcctgagcctggcctatgacctatca 42650064  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttc 238  Q
    |||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||| || ||| | |||||||| ||||||||| |||||||||||||    
T  42650063 taggccgtttttctaggcctgacctggcctatttaaaagcctggactggcctgaaagcctaattacaagcctacttgacattaaggccatcaaatagttc 42649964  T
Q  239 at 240  Q
    ||    
T  42649963 at 42649962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 109 - 240
Target Start/End: Complemental strand, 29523123 - 29522992
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  29523123 acaagcctgagcttggcctatggcctatcataggccgtttttctaggcctggtctggcctatttaaaagtctggactggcctgaaagcctacttacaggc 29523024  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||| |||||||||||||||    
T  29523023 ctacttcacattaaggccatcaaatagttcat 29522992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 19507057 - 19507255
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||| ||||||||  |||||||| |||| |||||| ||||||||||       |||||||| |||||||| ||||||  |||||||||    
T  19507057 taggggtgggaataggtcaggccagaccaggctttgataggcctgagcctggcctacgaaataaattacaagcctgagcctgacctatgacctatcatag 19507156  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||||||||||||||||||||  |||| ||||||||||||  ||||| || ||||||||||||||||| |||||||||||||||    
T  19507157 gccgtttttctaggtctggcctggcctatttaaaagcatggattggcctgaaagcccacttacagacctacttcacattaaggccatcaaatagttcat 19507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 5506951 - 5506827
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||| | |||||||||    
T  5506951 tgagcctggcctatggcctatcataggccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctacttacaagcctacttc 5506852  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    ||||||||| |||||||||||||||    
T  5506851 acattaaggccatcaaatagttcat 5506827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 17386439 - 17386236
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggc-----tttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctat 136  Q
    |||||||||||||||| |||| |||| |||||     ||| |||| |||||| ||||||||||       | | |||| |||| ||||||||||| ||||    
T  17386439 taggggtgggaataggtcaggtcaggccaggccagattttgataggcctgagcctggcctacgaaataaatcataagcctgagtctggcctatggcctat 17386340  T
Q  137 cataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
    |||||||||||||||| ||| ||||||| |||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  17386339 cataggccgtttttctaggcctggcctgacctatttaaaagcctggactggcttgaaagcctacttacaggcctacttcacattaaggtcatcaaatagt 17386240  T
Q  237 tcat 240  Q
    ||||    
T  17386239 tcat 17386236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 6305024 - 6305222
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| ||||  ||||| |||||||| |       ||||| || ||| ||||||||| ||||||||||||    
T  6305024 taggggtgggaataggccaggccaggccaggctttgataggtctgagcctggcctatgaaaaaatttacaggcctgaacctggcctacggtctatcatag 6305123  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    || |||||||| ||  || ||||||||||||||||| |||||||| ||||||||| || ||| |||||||||| ||||||||| |||||||||||||||    
T  6305124 gctgtttttctaggtctgacctggcctatttaaaagcctggactgccctgaaagcctaattacaggcctacttaacattaaggccatcaaatagttcat 6305222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 240
Target Start/End: Original strand, 44912596 - 44912795
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| |||||||||| |||| |||| ||| |||| |||| |||||||||| ||||||       | |||||| |||||||||||||||  ||||||||    
T  44912596 ttagggatgggaataggtcaggtcaggccagactttgataggcctgagtctgacctacgaaataaatcacaagcctgagcctggcctatgacctatcata 44912695  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| ||  |||  || |||||||||||| ||||||| |||| ||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  44912696 ggccgtttttctaggtctggtatgacctatttaaaagcctggactagcctaaaagcctacttacatgcctacttcacattaaggtcatcaaatagttcat 44912795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 27090940 - 27090747
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||      |||| |||| |||||| ||||||||||       | ||| |  |||||||| ||||||  |||||||||    
T  27090940 taggggtgggaataggccaggccaga-----ctttgataggcctgagcctggcctacgaaataaatcacatgtctgagcctgacctatgacctatcatag 27090846  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||| ||||||| ||||||| |||||||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  27090845 gccatttttctaggcttggtctggcctatttaaaagcctggactagcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 27090747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 47367547 - 47367424
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||| ||||||||||| ||||||||||||||||| || ||| || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  47367547 tgagtctggcctatggcctatcataggccgtttt-ctaggcctgacctggcctatttaaaagtctggactggcctgaaagcctacttacaggcctacttc 47367449  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    ||||||||  |||||||||||||||    
T  47367448 acattaagaccatcaaatagttcat 47367424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 33785194 - 33785366
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || ||||||||||||||||||| || ||||||    
T  33785194 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcttgagcctggcctatggcctttcatag 33785293  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  33785294 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 33785366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 5616499 - 5616692
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||     |||| |||| |||||||||| ||||||       | |||||| |||| || |||||||| ||||||||     
T  5616499 taggggtgggaataggccaggccagg-----ctttgataggcctgagtctgacctacgaaataaatcacaagcctgagtctagcctatggcctatcatat 5616593  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
     |||||||||| ||| ||| ||| ||||||||||||||||||||||| | ||||| |||||| | |||||||||||||||||| |||||||||||||||    
T  5616594 cccgtttttctaggcctggtctgacctatttaaaagtctggactggcttaaaagcctacttacaagcctacttcacattaaggccatcaaatagttcat 5616692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 19709097 - 19708925
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  19709097 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 19708998  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  19708997 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 19708925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 42 - 237
Target Start/End: Complemental strand, 34050133 - 34049936
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata- 140  Q
    ||||||||| |||||| ||||||||| ||| |||| ||||   |||| ||||||||||       |||||||| |||||||||||| ||| |||| |||     
T  34050133 taggggtggaaataggtcaggccaggccagactttgataggtttgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattatat 34050034  T
Q  141 -ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagtt 237  Q
     |||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||| | || ||||| | ||||||| ||||||||||||    
T  34050033 aggccgttttttttggcctggcctgacctatttaaaagtctggactggcctgaaagcctacttacaagcatactttatattaaggccatcaaatagtt 34049936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 39860590 - 39860414
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatc 137  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| |||||| |||| |||||       || || || |||||||||||||||| || ||    
T  39860590 taattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggtctacgaaaaaatttgcaggcctgagcctggcctatggcctttc 39860491  T
Q  138 ataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||  || | ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  39860490 ataggcctattattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 39860414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 52222725 - 52222897
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || | |||||||||||||| || ||||||    
T  52222725 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcatag 52222824  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  52222825 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 52222897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 8417233 - 8417399
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtt 147  Q
    |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || | |||||||||||||| || |||||||||  |    
T  8417233 tgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttcataggcctat 8417332  T
Q  148 tttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  8417333 ttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 8417399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 6889633 - 6889461
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||| |||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||| | || |||||     
T  6889633 tagggttgggaataggctaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatagcctttcataa 6889534  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| ||||| ||||||||||||||||||| ||| ||||||||| || ||| ||||||||||    
T  6889533 gcctatttttttggcctggccaggcctatttaaaagtctggcctgacctgaaagcctatttacaggcctactt 6889461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 6891479 - 6891307
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||| |||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||| | || |||||     
T  6891479 tagggttgggaataggctaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatagcctttcataa 6891380  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| ||| ||||||||||||||||||||| ||| ||||||||| || ||| ||||||||||    
T  6891379 gcctatttttttggcctggtctggcctatttaaaagtctggcctgacctgaaagcctatttacaggcctactt 6891307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 17805813 - 17805953
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||| ||||       || || || |||||||||||||||| || ||||||    
T  17805813 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcatacgaaaaattttgcaggcctgagcctggcctatggcctttcatag 17805912  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctgg 182  Q
    |||  |||| ||||| |||||||||||||||||||| ||||    
T  17805913 gcctatttttttggcctggcctggcctatttaaaagcctgg 17805953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 211
Target Start/End: Complemental strand, 31493548 - 31493397
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| |||| |||||| ||||||||||       ||||||||||||||||||||||||   | |||||||||  |||| ||||| |     
T  31493548 aggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcttgagcctggcctatgacatttcataggcctatttttttggccta 31493449  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggccta 211  Q
    ||||| ||||||||||||||||| |||||| |||||| || ||| |||||||    
T  31493448 gcctgacctatttaaaagtctggtctggcccgaaagcttatttacaggccta 31493397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 240
Target Start/End: Original strand, 7329664 - 7329785
Alignment:
Q  119 gcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcaca 218  Q
    ||||||||||||| |||| |||||||| |||||||||  |||||| || | ||||||||||||||||||||||||||| |||||  | ||| |||| |||    
T  7329664 gcctggcctatggcctattataggccgattttcttggtctggccttgcttgtttaaaagtctggactggcctgaaagcctacttcaaagcccactttaca 7329763  T
Q  219 ttaaggtcatcaaatagttcat 240  Q
    || ||| |||||| ||||||||    
T  7329764 tttaggccatcaagtagttcat 7329785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 46313691 - 46313823
Alignment:
Q  108 tacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatagg 207  Q
    ||||||| | ||||| |||||||| |||||||||||||||||||||||| ||| |||||||||| |||||  ||| ||| ||||| ||| || ||  | |    
T  46313691 tacaagcctaagcctagcctatggcctatcataggccgtttttcttggcctggtctggcctattaaaaagcatggtctgacctgatagcctaatttgaag 46313790  T
Q  208 cctacttcacattaaggtcatcaaatagttcat 240  Q
    |||| || |||||| ||||||||||||||||||    
T  46313791 cctatttaacattatggtcatcaaatagttcat 46313823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 46846785 - 46846930
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||||||  |||| ||||| |||||||||||    
T  46846785 caggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctggcctggcct 46846884  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||| || | ||||||||||||| || ||| ||||||||||    
T  46846885 atttaaaagcctagcctggcctgaaagcctatttacaggcctactt 46846930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 50097166 - 50097012
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||||||||||| ||||| ||| |||| | ||||| |||||||||       || || |  ||||| |||||||||| || ||||||    
T  50097166 tagggttgggaataggccaggccagatcaggttttgataggcttgagtttggcctacgaaaaaatttgcaggtctgagcatggcctatggcctttcatag 50097067  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagc 196  Q
    |||  |||| ||||| ||||||||||||||||||||| |||  ||||||||||||    
T  50097066 gcctatttttttggcctggcctggcctatttaaaagtatggcttggcctgaaagc 50097012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 44969045 - 44969199
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| |||| |||||| || |||||||       || || || ||| || || |||||| || |||||||||  |||| ||||| ||    
T  44969045 aggccaggccaggctttgataggcctgagcctagcctacgaaaaaatttgcaggcctgatcccggtctatggcctttcataggcctatttttttggcctg 44969144  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||| ||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  44969145 gcctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 44969199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 214
Target Start/End: Original strand, 13253271 - 13253415
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| |||||| ||||||||||       || || || |||||||| ||||||| || ||||||||| ||||| ||||| |||||||||||    
T  13253271 caggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataggcctttttt-ttggcctggcctggcct 13253369  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||   || ||||||||| || ||| ||||||||||    
T  13253370 atttaaaagtctgacatgacctgaaagcctatttacaggcctactt 13253415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 6889093 - 6888950
Alignment:
Q  70 aggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggccta 169  Q
    ||||||| ||||  ||||||||||||||||       || || || |||||||| ||||||| || ||||| ||| ||||| ||| || |||||||||||    
T  6889093 aggctttgataggtctgagtctggcctacgaaaaaatttgcaggcctgagcctgacctatggcctttcataagcctttttttttgcct-ggcctggccta 6888995  T
Q  170 tttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||| |||| ||| ||| |||||||| ||| ||||||||||    
T  6888994 tttaaaagcctggcctgacctaaaagcatatttacaggcctactt 6888950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 24038241 - 24038368
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||| |||| |||| |||||||| |||| |||||| ||||||||||       || ||||| ||||||| |||||||| || ||||||    
T  24038241 tagggttgggaataggtcaggtcaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaagcctgagcctagcctatggcctttcatag 24038340  T
Q  142 gccgtttttcttggcttggcctggccta 169  Q
    |||  |||| ||||  ||||||||||||    
T  24038341 gcctatttttttggtctggcctggccta 24038368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 3831588 - 3831642
Alignment:
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||||||||||||||||  ||||||||||||| || ||| ||||||||||    
T  3831588 gcctggcctatttaaaagtctgacctggcctgaaagcctatttacaggcctactt 3831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 31316145 - 31316206
Alignment:
Q  179 ctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||| ||||||| |||||  || |||| || |||||||||||||||||||||||||    
T  31316145 ctggactggcttgaaagcctactttcagacctattttacattaaggtcatcaaatagttcat 31316206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 45372792 - 45372736
Alignment:
Q  158 tggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||| |||||||||||||| ||| ||||||||||||| || ||| ||||||||||    
T  45372792 tggcctagcctatttaaaagtttggcctggcctgaaagcctatttacaggcctactt 45372736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 2988656 - 2988823
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||||| |||||||||| |||| ||||  ||||||||| ||||||       || || |  ||||||||||||||||||| ||||||    
T  2988656 tagggttgggaataggccacgccaggtcagactttgataggtctgagtctgacctacgaaaatttttgcaggtctgagcctggcctatggtctttcatag 2988755  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
      |  ||||      ||||||| ||||||||||||| |||| ||||| ||||||  || ||| ||||||||||    
T  2988756 atctatttt-----tttggcctagcctatttaaaagcctggtctggcatgaaagtctatttacaggcctactt 2988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 8703904 - 8703847
Alignment:
Q  158 tggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    ||||||||||||||||||||||||  ||||  || ||||||| ||| |||||||||||    
T  8703904 tggcctggcctatttaaaagtctgacctggattggaagcatatttacaggcctacttc 8703847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 34083965 - 34084026
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||||||| | |||||||||||| ||||| ||| |||| |||| |||||| ||||||||||    
T  34083965 taattagggttaggaataggccagaccaggccagactttgataggcctgagcctggcctacg 34084026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 31225634 - 31225554
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagc 196  Q
    ||||| || ||||||| || |||||||||  |||| ||||| ||  ||| ||||||||||||| ||| |||||||||||||    
T  31225634 tgagcttgacctatggcctttcataggcctatttttttggcctgatctgacctatttaaaagtttggcctggcctgaaagc 31225554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 31502412 - 31502297
Alignment:
Q  118 agcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcac 217  Q
    |||||| |||||| ||| |||||||||  |||| ||||  || |||| ||||||||||||||| ||| | ||||||||| || |||||| | || ||||     
T  31502412 agcctgacctatgatctttcataggcctatttt-ttggtctgacctgacctatttaaaagtctagaccgacctgaaagcctatttatagacatatttcat 31502314  T
Q  218 attaaggtcatcaaata 234  Q
    ||||| ||||| |||||    
T  31502313 attaaagtcattaaata 31502297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 9338388 - 9338188
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||| ||       | |||||| |||||||||||||||| |||||||    
T  9338388 attagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctgcgaaataaatcacaagcctgagcctggcctatggcctatcat 9338289  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    ||| ||||||||| ||| |||||||||||||||||||| |||||||| ||||||||| |||||| | |||||||||||||||||| ||||||||||||||    
T  9338288 aggtcgtttttctaggcctggcctggcctatttaaaagcctggactgacctgaaagcctacttacaagcctacttcacattaaggccatcaaatagttca 9338189  T
Q  240 t 240  Q
    |    
T  9338188 t 9338188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 41636281 - 41636481
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    |||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||       | |||||| ||||||||| |||||| |||||||    
T  41636281 attaggggtgggaataggccaggccaggccaggctttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctggtctatggcctatcat 41636380  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    | ||| |||||||  || ||||||||||||||||||||  |||||| |||||||||| |||||| |||||||||||||||||||| ||||||||||||||    
T  41636381 atgccatttttctaagcctggcctggcctatttaaaagcttggactcgcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttca 41636480  T
Q  240 t 240  Q
    |    
T  41636481 t 41636481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 4357148 - 4356950
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||| |||||||| |||| |||||| ||||||||||       |||||||| | ||||| |||| |||||||| |||     
T  4357148 taggggtgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttacaagcctaagcctagcctgtggtctattataa 4357049  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| || ||| |||||||||||| ||||||| |||||||||||||||    
T  4357048 gccgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctatttacaggcctacttcatattaaggccatcaaatagttcat 4356950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 25593797 - 25593599
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||| |||||||||||||||| ||||||||||||| |||| |||||| ||||||||||       | |||||  |||||||||||||||| |||||||||    
T  25593797 taggtgtgggaataggccagggcaggtcaggctttgataggcctgagcctggcctacgaaataaatcacaagtctgagcctggcctatggcctatcatag 25593698  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||| | ||| ||||||||||||||||||||  | ||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  25593697 gccgtttttttaggcctggcctggcctatttaaaagcgtagactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 25593599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 24133761 - 24133954
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||     |||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  24133761 taggggtgggaataggccaggccagg-----ctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 24133855  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||||||| |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  24133856 gccgtttttctaggtctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 24133954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 41129842 - 41129649
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||     |||| |||| |||||| ||||||||||       |||||||| |||||||||||| ||| |||| ||||    
T  41129842 taggggtgggaataggccaggccagg-----ctttgataggcctgagcctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctattatag 41129748  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||||    
T  41129747 gccgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacaggcctactttatattaaggtcatcaaatagttcat 41129649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 39 - 240
Target Start/End: Complemental strand, 46136486 - 46136290
Alignment:
Q  39 aattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatca 138  Q
    |||||| ||||||||||||||||||||||     |||| |||| |||||||||||||||||       |||||||| |||||||||||| ||| |||| |    
T  46136486 aattagaggtgggaataggccaggccagg-----ctttgataggcctgagtctggcctacgaaaaaatttacaagcctgagcctggcctgtggcctatta 46136392  T
Q  139 taggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttc 238  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||| | |||||||| | |||||||||||||||||||||    
T  46136391 taggccgtttttcttggcctggtctgacctatttaaaagtctggactggcctgaaagcctacttacatgcctactttatattaaggtcatcaaatagttc 46136292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 26994887 - 26994687
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    |||||||||||||||||||||| ||||| ||| |||| |||| |||||| ||||||||||       ||||| || |||||||||||||||| |||||||    
T  26994887 attaggggtgggaataggccagaccaggccagactttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcat 26994788  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttca 239  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||  || ||| | |||||||| ||||||||| ||||||||||||||    
T  26994787 aggccgtttttctaggcctggcctgacctatttaaaagcctggactggcctgaaagtctaattacaagcctacttaacattaaggccatcaaatagttca 26994688  T
Q  240 t 240  Q
    |    
T  26994687 t 26994687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 39889321 - 39889519
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||| ||||  |||||||| |||| |||||| ||||||||||       ||||| || |||||||||||||||| |||||||||    
T  39889321 taggggtgggaataggccagaccagaccaggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcatag 39889420  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||  ||||||||| |||||||||| |||||||||||||||||| || ||| | |||||||| ||||||||| |||||||||||||||    
T  39889421 gccgtttttctaggtctggcctggcttatttaaaagcctggactggcctgaaagcctaattacaagcctacttaacattaaggccatcaaatagttcat 39889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 42294114 - 42294307
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||||||||||     |||| |||| |||||| ||||||||||       | |||||| |||||||| ||||||| |||||||||    
T  42294114 taggggtgggaataggccaggccagg-----ctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctgacctatggcctatcatag 42294208  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||| |||||| || ||| ||||||||||||| |||||||||||||||    
T  42294209 gccgtttttctaggcctggcctggcctatttaaaagcctggactgacctgaaagcctacttacagacctccttcacattaaggccatcaaatagttcat 42294307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 42 - 202
Target Start/End: Original strand, 51302361 - 51302521
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||| ||| |||||||| |||| |||||| ||||||||||       | |||||| |||||||||||||||| |||||||||    
T  51302361 taggggtgggaataggccaggctaggccaggctttgataggcctgagcctggcctacgaaataaatcacaagcctgagcctggcctatggcctatcatag 51302460  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  51302461 gccgtttttctaggcctggcctggcctatttaaaagcctggactggcctgaaagcctactt 51302521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 4481649 - 4481847
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| | || |||||| ||||||||||        ||||||| | |||||||||||||| |||||||||    
T  4481649 tagggttgggaataggccaggccaggccaggctttgaaaggcctgagcctggcctacgaaaaaatatacaagcctaagcctggcctatggcctatcatag 4481748  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||||||||| |||||||||||||| ||||| |||| ||||||||||||| || ||  | ||||| || |||||| ||||||||||||||||||    
T  4481749 gccgtttttcttggcctggcctggcctattaaaaagcctggcctggcctgaaagcctaatttgaagcctatttaacattatggtcatcaaatagttcat 4481847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 50638550 - 50638681
Alignment:
Q  109 acaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggc 208  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||| ||||||   ||    
T  50638550 acaagcctgagcctggcctatggcctatcataggccgtttttctaggcctggtctggcctatttaaaagtctggactgacctgaaagcctacttacgtgc 50638649  T
Q  209 ctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||| |||||||||||||||||||||||||    
T  50638650 ctactttacattaaggtcatcaaatagttcat 50638681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 236
Target Start/End: Complemental strand, 35761568 - 35761439
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||| | || ||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||| ||    
T  35761568 ttacaagcctaagtctgacctatggcctatcataggccgtttttcttggcctggcctgacctatttaaaagtctggaccggcctgaaagcctacttacag 35761469  T
Q  207 gcctacttcacattaaggtcatcaaatagt 236  Q
    |||||||||||||||||| |||||||||||    
T  35761468 gcctacttcacattaaggccatcaaatagt 35761439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 43010294 - 43010161
Alignment:
Q  107 ttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttatag 206  Q
    |||||||| | |||||||||||||| |||| ||||||||||||||||||  ||||||| ||||||||||||||||||||| ||||||||| |||||| ||    
T  43010294 ttacaagcctaagcctggcctatggcctattataggccgtttttcttggtctggcctgacctatttaaaagtctggactgacctgaaagcctacttacag 43010195  T
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    | |||||||| |||||||||||||||||||||||    
T  43010194 gactacttcaaattaaggtcatcaaatagttcat 43010161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 31406039 - 31405846
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||| |     |||| |||| ||| || ||||||||||       |||||||| |||| ||||||| ||| |||| ||||    
T  31406039 taggggtgggaataggccaggccatg-----ctttgataggcctaagcctggcctacgaaaaaatttacaagcctgagtctggcctgtggcctattatag 31405945  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| || ||||||| |||||||||||| ||||||| |||||||||| |||||| |||||||||| | ||||||| |||||||||||||||    
T  31405944 gccgtttttcttagcctggcctgacctatttaaaagcctggactagcctgaaagcctacttacaggcctactttatattaaggccatcaaatagttcat 31405846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 214
Target Start/End: Complemental strand, 1782814 - 1782638
Alignment:
Q  38 taattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatc 137  Q
    ||||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || | |||||||||||||| || ||    
T  1782814 taattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctaagcctggcctatggcctttc 1782715  T
Q  138 ataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  1782714 ataggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 1782638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 40000907 - 40000733
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat 139  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||    
T  40000907 attagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcat 40000808  T
Q  140 aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||  |||| ||||| |||||||||||||||| ||| |||| ||||||||||||| || ||| ||||||||||    
T  40000807 aggcctatttttttggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctactt 40000733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 214
Target Start/End: Complemental strand, 34705436 - 34705263
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcata 140  Q
    |||||| |||||||||||||||||||| |||||||| |||| |||||| |||||||||        || || || |||||||||||||||| || |||||    
T  34705436 ttagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacaaaattttttgcaggcctgagcctggcctatggcctttcata 34705337  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  34705336 ggcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 34705263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 214
Target Start/End: Original strand, 39391045 - 39391222
Alignment:
Q  37 ataattaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctat 136  Q
    |||||||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |    
T  39391045 ataattagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggccttt 39391144  T
Q  137 cataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||  || | ||||| |||||||||||||||||||| |||| |||| |||||||| || ||| ||||||||||    
T  39391145 cataggcctattattttggcctggcctggcctatttaaaagcctggcctggtctgaaagcctatttacaggcctactt 39391222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 47597210 - 47597038
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||  |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  47597210 tagggttgggaataggccaggccagaccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 47597111  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  47597110 gcctatttttttggcctggcctggcctatttaaaagcctggtctggcctgaaagcctaattacaggcctactt 47597038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 14751807 - 14752002
Alignment:
Q  45 gggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggcc 144  Q
    |||||||||||||||||| |||| |||| ||  |||| |||||| ||| ||||||       |||||||| |||| ||| ||| ||| |||| |||||||    
T  14751807 gggtgggaataggccaggtcaggccaggtttagataggcctgagcctgacctacgaaaaaatttacaagcctgagtctgtcctgtggcctattataggcc 14751906  T
Q  145 gtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||| || |||| |||||||||||| || |||||||||| |||| |||||| || ||||||| | ||||||| |||||||||||||||    
T  14751907 gtttttcttggcctgacctgacctatttaaaagcctagactggcctgcaagcctacttacagacctactttatattaaggccatcaaatagttcat 14752002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 42 - 236
Target Start/End: Original strand, 22523399 - 22523597
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcat-- 139  Q
    ||||||||||||||||||||  |||  |||||||| |||| |||||| ||||||||||       ||||| || | || ||| ||||||| |||||||      
T  22523399 taggggtgggaataggccagatcagaccaggctttgatagacctgagcctggcctacgaaattttttacaggcataagtctgacctatggcctatcatgc 22523498  T
Q  140 --aggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagt 236  Q
      |||||||||||||||||||| |||||||| ||||||||  ||||||||||||||||| |||||  |||||||||| |||||||||  ||||||||||    
T  22523499 ataggccgtttttcttggcttgacctggcctctttaaaagcttggactggcctgaaagcctacttccaggcctactttacattaaggctatcaaatagt 22523597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 240
Target Start/End: Complemental strand, 24120334 - 24120210
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||| ||||||||||| |||||||||||||||||||| ||  || |||| |||||||||||| ||||||||| |||||||| || ||| ||||||||||     
T  24120334 tgagtctggcctatggcctatcataggccgtttttctaggtctgacctgacctatttaaaagcctggactggtctgaaagcctaattacaggcctactta 24120235  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    ||||||||| |||||||||||||||    
T  24120234 acattaaggccatcaaatagttcat 24120210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 202
Target Start/End: Complemental strand, 26020477 - 26020316
Alignment:
Q  45 gggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctg----gcctatggtctatcata 140  Q
    ||||| |||||||||||| |||||||| |||| |||| |||||||||||||||||       | |||||| ||||||||    |||||||| ||||||||    
T  26020477 gggtgagaataggccaggtcaggtcagactttgataggcctgagtctggcctacgaaataaatcacaagcctgagcctgcctggcctatggcctatcata 26020378  T
Q  141 ggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatactt 202  Q
    |||||||||||| ||| ||||||| ||||||||||||  ||||||||||||||||| |||||    
T  26020377 ggccgtttttctaggcctggcctgacctatttaaaagcatggactggcctgaaagcctactt 26020316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 28793648 - 28793820
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||| |||||| ||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  28793648 tagggttggaaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 28793747  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
     ||  |||| ||||| ||||||||||||||||||||||||| | ||||||||||| || ||||||||||||||    
T  28793748 acctatttttttggcctggcctggcctatttaaaagtctggccaggcctgaaagcctatttataggcctactt 28793820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 214
Target Start/End: Complemental strand, 52174913 - 52174759
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| |||| |||||||||||||||||       || || || |||||||||||||||| || |||||||||  |||| ||||| ||    
T  52174913 aggccaggccaggctttgataggcctgagtctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcataggcctatttttttggcctg 52174814  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  52174813 gcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 52174759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 33249412 - 33249584
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||| | |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  33249412 tagggttgggaataggccaggccaagccaggctttgataggcctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggcctttcatag 33249511  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| ||| ||| |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  33249512 gcctatttttttggcctggtctgacctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 33249584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 133 - 240
Target Start/End: Original strand, 45387575 - 45387682
Alignment:
Q  133 ctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaa 232  Q
    ||||||||||| ||||||||| |  |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||| | |||||||  ||||||    
T  45387575 ctatcataggctgtttttctttgtctggcctggccgatttaaaagtctggactggcctgaaagcctacttagaggcctactttaaattaaggcaatcaaa 45387674  T
Q  233 tagttcat 240  Q
    ||||||||    
T  45387675 tagttcat 45387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 20647921 - 20647749
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||| |||||| ||||||||| |||||||| |||| |||||| ||||||||||       || || |  |||||||||||||||| || ||||||    
T  20647921 tagggttggaaataggtcaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggtctgagcctggcctatggcctttcatag 20647822  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| ||||||| ||||||||||||||||| ||||||||||||  || ||| ||||||||||    
T  20647821 gcctatttttttggcctggcctgacctatttaaaagtctggcctggcctgaaagtctatttacaggcctactt 20647749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 40489165 - 40488999
Alignment:
Q  48 tgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtt 147  Q
    ||||||||||| |||||||  |||||||| |||| |||||| ||||| ||||       || || || |||||||||||||||| || ||||||||   |    
T  40489165 tgggaataggctaggccagaccaggctttgataggcctgagcctggcttacgaaaaaatttccaggcctgagcctggcctatggcctttcataggcttat 40489066  T
Q  148 tttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||| ||||| || |||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  40489065 ttttttggcctgacctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 40488999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 34422718 - 34422620
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||| || ||| |||||  |||| ||||| ||||||||||||||||||||||||| ||||||||||||| || ||| ||||||||||    
T  34422718 tgagcctggcctatggcctttcacaggcctatttttttggcctggcctggcctatttaaaagtctggcctggcctgaaagcctatttacaggcctactt 34422620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 36265856 - 36265759
Alignment:
Q  143 ccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||| ||  || ||||||||||||||||| || |||||| |||||||  |||||| || |||||||||||||||||||||||||||||||||    
T  36265856 ccgtttttctaggtctgacctggcctatttaaaagcctcgactggtctgaaagtctacttacagacctacttcacattaaggtcatcaaatagttcat 36265759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 7046773 - 7046699
Alignment:
Q  166 cctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||| ||||  ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  7046773 cctatttgaaagcatggactgacctgaaagcctacttacaggcctacttcacattaaggtcatcaaatagttcat 7046699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 40000584 - 40000487
Alignment:
Q  117 gagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||||||||| || |||||||||  |||| ||||| |||||||||||||||| ||| |||| ||||||||||||| || ||| ||||||||||    
T  40000584 gagcctggcctatggcctttcataggcctatttttttggcctggcctggcctatttataagcctggtctggcctgaaagcctatttacaggcctactt 40000487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 54447581 - 54447762
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||||||||||||||||| |||||| |||||||| |||| |||||| ||||| ||||       | |||||| |||| ||||||||||| |||||||||    
T  54447581 taggggtgggaataggccaagccaggccaggctttgataggcctgagcctggcatacgaaataaatcacaagcctgagtctggcctatggcctatcatag 54447680  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    | ||||||| | ||| ||||||||                 |||||||||||||  |||||| |||||||||||||||||||| |||||||||||||||    
T  54447681 gtcgtttttttaggcctggcctgg-----------------actggcctgaaagtctacttacaggcctacttcacattaaggccatcaaatagttcat 54447762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 214
Target Start/End: Original strand, 25536859 - 25537008
Alignment:
Q  65 aggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctg 164  Q
    |||||||||||| |||| |||||||||||||||||       || || || ||||||||| |||||  || |||||||||  |||| ||||| || ||||    
T  25536859 aggtcaggctttgataggcctgagtctggcctacgaaaaaatttgcaggcctgagcctggtctatgacctttcataggcctatttttttggcatgacctg 25536958  T
Q  165 gcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
     |||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  25536959 acctatttaaaagcctggtctggcctgaaagcctatttacaggcctactt 25537008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 19420962 - 19421088
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  19420962 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 19421061  T
Q  142 gccgtttttcttggcttggcctggcct 168  Q
    |||  || | ||||| |||||||||||    
T  19421062 gcctattattttggcctggcctggcct 19421088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 29076864 - 29076990
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  29076864 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaaatttttgcaggcctgagcctggcctatggcctttcatag 29076963  T
Q  142 gccgtttttcttggcttggcctggcct 168  Q
    |||  || | ||||| |||||||||||    
T  29076964 gcctattattttggcctggcctggcct 29076990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 214
Target Start/End: Original strand, 54650459 - 54650613
Alignment:
Q  60 aggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttg 159  Q
    |||||||| |||||||| ||||  ||||| ||||||||||       || || || |||||||||||||||| || | |||||||  |||| ||||  ||    
T  54650459 aggccaggccaggctttgataggtctgagcctggcctacgaaaaattttgcaggcctgagcctggcctatggccttttataggcctatttttttggtctg 54650558  T
Q  160 gcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||||||||||| |||  ||||||||||||| || ||| ||||||||||    
T  54650559 gcctggcctatttaaaagcctgccctggcctgaaagcctatttacaggcctactt 54650613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 34636350 - 34636463
Alignment:
Q  55 aggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttg 154  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || |||||||||  |||| |||    
T  34636350 aggccaggccaggtcaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcataggcctatttttttg 34636449  T
Q  155 gcttggcctggcct 168  Q
    |  |||||||||||    
T  34636450 gtctggcctggcct 34636463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 190
Target Start/End: Original strand, 52274336 - 52274476
Alignment:
Q  45 gggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggcc 144  Q
    |||||| ||||||| ||| |||| ||| |||| |||| ||||| |||| ||||||       | |||||| ||||| |||||||||| ||||||||||||    
T  52274336 gggtggaaataggctaggtcaggccagactttgataggcctgaatctgacctacgaaataaatcacaagcctgagcttggcctatggcctatcataggcc 52274435  T
Q  145 gtttttcttggcttggcctggcctatttaaaagtctggactggcct 190  Q
    ||||||     || ||||||  ||||||||||||||||||||||||    
T  52274436 gttttt-----ctaggcctgatctatttaaaagtctggactggcct 52274476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 46068060 - 46068158
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||||||||||  | |||||||||  |||| ||||  ||| |||| ||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  46068060 tgagcctggcctatggcttttcataggcctatttttttggtctggtctgggctatttaaaagcctggtctggcctgaaagcctatttacaggcctactt 46068158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 13596161 - 13596218
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||    
T  13596161 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacg 13596218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 24541102 - 24541000
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||||| |||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  24541102 tagggttgggaataggccaagccaggccaggctttgataggcctgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 24541003  T
Q  142 gcc 144  Q
    |||    
T  24541002 gcc 24541000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 210
Target Start/End: Complemental strand, 33069479 - 33069392
Alignment:
Q  123 ggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcct 210  Q
    ||||||| | || |||||||||  |||| ||||| || |||| ||||||||||||||||| ||||||||||||| || ||| ||||||    
T  33069479 ggcctatagcctttcataggcctatttttttggcctgacctgacctatttaaaagtctggcctggcctgaaagcctatttacaggcct 33069392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 33069550 - 33069492
Alignment:
Q  41 ttaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    |||||| |||||||||||||||||||| ||| |||| |||| |||||| ||||||||||    
T  33069550 ttagggttgggaataggccaggccaggccagactttgataggcctgagcctggcctacg 33069492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 214
Target Start/End: Original strand, 41873498 - 41873554
Alignment:
Q  158 tggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    ||||||||||||||||||||| ||| ||||||||||||  || ||| ||||||||||    
T  41873498 tggcctggcctatttaaaagtatggcctggcctgaaagtctatttacaggcctactt 41873554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 46116491 - 46116571
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagc 196  Q
    |||||||||||||||| || |||||||||  |||| || || ||| |||||||||||||||| |||  ||| |||||||||    
T  46116491 tgagcctggcctatggcctttcataggcctatttttttagcctggtctggcctatttaaaaggctgacctgacctgaaagc 46116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 55008165 - 55008263
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||||||||| | ||| || |||||||||  |||| ||||   || ||| ||||||||||||| ||| ||||||||||||| || ||| ||||||||||    
T  55008165 tgagcctggcttgtggcctttcataggcctatttttttggtcaggtctgacctatttaaaagtttggtctggcctgaaagcctatttacaggcctactt 55008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 7046861 - 7046804
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacg 99  Q
    |||||||||||||||| |||||||||  || |||| |||| || ||||||||||||||    
T  7046861 taggggtgggaataggtcaggccaggctagactttgataggccagagtctggcctacg 7046804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 47844569 - 47844630
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaag 177  Q
    |||||||||||||||| || |||||||||  |||| ||||| ||  ||||||||||||||||    
T  47844569 tgagcctggcctatggcctttcataggcctatttttttggcctgatctggcctatttaaaag 47844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 51302514 - 51302547
Alignment:
Q  207 gcctacttcacattaaggtcatcaaatagttcat 240  Q
    |||||||||||||||||| |||||||||||||||    
T  51302514 gcctacttcacattaaggccatcaaatagttcat 51302547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 69 - 240
Target Start/End: Complemental strand, 1884 - 1713
Alignment:
Q  69 caggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcct 168  Q
    |||||||| |||| |||||| ||||||||||       ||||| || |||||||||||||||| |||||||||||||||||| | ||| || ||||||||    
T  1884 caggctttgataggcctgagcctggcctacgaaaaaatttacaggcctgagcctggcctatggcctatcataggccgtttttttaggcctgacctggcct 1785  T
Q  169 atttaaaagtctggactggcctgaaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||||||| |||||||||||||||||| || ||||| | |||||| |||||||||||||||||||||||||    
T  1784 atttaaaagcctggactggcctgaaagcctaattataagtctacttaacattaaggtcatcaaatagttcat 1713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 240
Target Start/End: Original strand, 10681 - 10805
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctacttc 215  Q
    |||||||||||| ||| |||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| || |||||||     
T  10681 tgagcctggcctgtggcctattataggccgtttttcttggcctggcctgacctatttaaaagcctggactggcctgaaagcctacttacagacctacttt 10780  T
Q  216 acattaaggtcatcaaatagttcat 240  Q
    | ||||||||||||||| |||||||    
T  10781 atattaaggtcatcaaaaagttcat 10805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 10636 - 10692
Alignment:
Q  40 attaggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcct 96  Q
    ||||||||||||||||||||||| |||| |||||||| |||| |||||| |||||||    
T  10636 attaggggtgggaataggccaggtcaggccaggctttgataggcctgagcctggcct 10692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 40900 - 41072
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| |||||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  40900 tagggttgggaataggccaggccaggccaggctttgataggcctgagcctggcctacgaaattttttgcaggcctgagcctggcctatggcctttcatag 40999  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  41000 gcctatttttttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 41072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 81464 - 81292
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||||||||| |||||||| |||| | |||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  81464 tagggttgggaataggccaggccaggccaggctttgataggcttgagcctggcctacgaaaaaatttgcaggcctgagcctggcctatggcctttcatag 81365  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  || | ||||| |||||||||||||||||||| |||| ||||||||||||| || ||| ||||||||||    
T  81364 gcctattattttggcctggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctactt 81292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 39974 - 40147
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| |||||||||||||| |||||||||||||| |||| | |||| ||||||||||       || || || |||||||||||||||| || ||||||    
T  39974 tagggttgggaataggccagaccaggtcaggctttgataggcttgagcctggcctacgaaaaaaattgcaggcctgagcctggcctatggcctttcatag 40073  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctg-aaagcatacttataggcctactt 214  Q
    |||  |||| ||||| ||||||| |||||||||||| |||| |||||||| ||||| || ||| ||||||||||    
T  40074 gcctatttttttggcatggcctgacctatttaaaagcctggcctggcctgaaaagcctatttacaggcctactt 40147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 214
Target Start/End: Complemental strand, 14463 - 14292
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    ||||| ||||||||||||||| |||| |||||||| |||| |||||||||||||||||       || || || |||||||| ||||||  || ||||||    
T  14463 tagggttgggaataggccaggtcaggccaggctttgataggcctgagtctggcctacgaaaatttttgcaggcctgagcctgccctatgtcctttcatag 14364  T
Q  142 gccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctactt 214  Q
    |||  |||| ||||| |||||||||||||||||||  |||| ||| ||||||||| || ||| ||||||||||    
T  14363 gcctatttttttggcctggcctggcctatttaaaa-cctggtctgacctgaaagcctaattacaggcctactt 14292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 15639 - 15739
Alignment:
Q  116 tgagcctggcctatggtctatcataggccg--tttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcctact 213  Q
    |||||||||||||||| || |||||||||   ||||| |||||||||||||||||||||||||| |||| ||||||||||||| || ||| |||||||||    
T  15639 tgagcctggcctatggcctttcataggcctatttttttttggcttggcctggcctatttaaaagcctggcctggcctgaaagcctatttacaggcctact 15738  T
Q  214 t 214  Q
    |    
T  15739 t 15739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 9151 - 9261
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggcctacgnnnnnnnttacaagcttgagcctggcctatggtctatcatag 141  Q
    |||||||||||||||||||||||||  |||||||| |||| |||||| |||||||||        | |||||| |||||||||||||||  |||||||||    
T  9151 taggggtgggaataggccaggccagaccaggctttgataggcctgagcctggcctacaaaataaatcacaagcctgagcctggcctatgacctatcatag 9250  T
Q  142 gccgtttttct 152  Q
    |||||||||||    
T  9251 gccgtttttct 9261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 9274 - 9322
Alignment:
Q  192 aaagcatacttataggcctacttcacattaaggtcatcaaatagttcat 240  Q
    ||||| |||||| |||||||||||||||||||| |||||||||||||||    
T  9274 aaagcctacttacaggcctacttcacattaaggccatcaaatagttcat 9322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 218322 - 218242
Alignment:
Q  116 tgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagc 196  Q
    |||| ||||||||||| || |||||||||  |||| |||| |||| ||||||||||||||||||||| |||||||||||||    
T  218322 tgagtctggcctatggcctttcataggcctatttttttggtttggtctggcctatttaaaagtctggcctggcctgaaagc 218242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 24846 - 24949
Alignment:
Q  111 aagcttgagcctggcctatggtctatcataggccgtttttcttggcttggcctggcctatttaaaagtctggactggcctgaaagcatacttataggcct 210  Q
    |||| |||||||||||||||| || |||||| ||  |||| ||||| | | |||||||||||||||| |||| ||| ||||||||| || ||| ||||||    
T  24846 aagcctgagcctggcctatggcctttcatagacctatttttttggcctagtctggcctatttaaaagcctggtctgacctgaaagcctatttacaggcct 24945  T
Q  211 actt 214  Q
    ||||    
T  24946 actt 24949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1702 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1702
Description:

Target: scaffold1702; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 53 - 1
Alignment:
Q  42 taggggtgggaataggccaggccaggtcaggctttaatagtcctgagtctggc 94  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||| |||||    
T  53 taggggtgggaataggccaggtcaggccaggctttgataggcctgagcctggc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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