View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6277_low_93 (Length: 234)
Name: NF6277_low_93
Description: NF6277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6277_low_93 |
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Alignment Details
Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 17584929 - 17584712
Alignment:
| Q |
13 |
aatttactcttaaatatttgattgtaagttatgtaaccatatttgtcaatgttaccgacacctttcagatactcgagatgccttcaatgtgaagtgttgg |
112 |
Q |
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| T |
17584929 |
aatttactcttaaatatttgaatgtaagttatgtaaccatatttgtcaatgttaccgacacctttcaaacactcgagatgccttcaatgtgaagtgttgg |
17584830 |
T |
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| Q |
113 |
tgctacattatattaccagtgatcttgtttgatattttaaagattgtaaaatatatattttccatttatacagattcttgtaccaatgtgaggattgaag |
212 |
Q |
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| T |
17584829 |
tgctacattgtattaccaactatcttgtttgatattttaaagattgtaaaatatatattttccatttatacagattcttctaccaatgtgaggattgaag |
17584730 |
T |
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| Q |
213 |
attgtcaaatagtctctg |
230 |
Q |
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||||||||||||| |||| |
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| T |
17584729 |
attgtcaaatagtttctg |
17584712 |
T |
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