View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6278_high_6 (Length: 279)
Name: NF6278_high_6
Description: NF6278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6278_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 1505287 - 1505025
Alignment:
| Q |
1 |
atataattagaagggacttattaacttgcattggatagaaaacataggaaattccccccaatttaccgtaaatattgaatatccaggttttattaagaat |
100 |
Q |
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| T |
1505287 |
atataattagaagggacttattaacttgcattggatagaaaacataggaaattccccccaatttaccgtaaatatagaatatccaggttttattaagaat |
1505188 |
T |
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| Q |
101 |
ttaggtactttgacatctcctttgattttatgttaaaaaggaagtagaactcattcttgaatgatatcggggttcttcaagattgaatcatcttcatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1505187 |
ttaggtactttgacatctcctttgattttatgttaaaaaggaagtagaactcattcttgaatgatatcggggttcttcaagattgaatcatcttcatttg |
1505088 |
T |
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| Q |
201 |
atgcaaactaatcttccttgcatcctgtttgtaaagctacaatgagtatgagtagctaaattc |
263 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1505087 |
atgcaaactaatctttcttgcatcctgtttgtaaagctacaatgagtatgagtagctaaattc |
1505025 |
T |
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