View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6283_high_6 (Length: 258)
Name: NF6283_high_6
Description: NF6283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6283_high_6 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 13920612 - 13920372
Alignment:
| Q |
18 |
aacaaaaccccaccaaccctaatttcaaaacaaaccccaacactattcctattggcgcccccaccaagtaaaatgagtaaaaatttattcctgccccaat |
117 |
Q |
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| T |
13920612 |
aacaaaaccccaccaaccctaatttcaaaacaaaccccaacactattcctattggcgcccccaccaagtaaaatgagtaaaaatttatccctgccccaat |
13920513 |
T |
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| Q |
118 |
acctggtcttgcactccctctaagtattccacaactagttgtttgtggacaatttgctaactcacaaacaccaattataggtaaaactgccattgtcaac |
217 |
Q |
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| T |
13920512 |
acctggtcttgcactccctctaagtattccacaactagttgtttgtggacaatttgctaactcacaaacaccaattataggtaaaactgccattgtcaac |
13920413 |
T |
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| Q |
218 |
tctagcacctctttatcatttgtgaacactttcccccattt |
258 |
Q |
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| T |
13920412 |
tctagcacctctttatcatttgtgaacactttcccccattt |
13920372 |
T |
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