View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6283_low_2 (Length: 581)

Name: NF6283_low_2
Description: NF6283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6283_low_2
NF6283_low_2
[»] chr7 (51 HSPs)
chr7 (1-489)||(24711936-24712426)
chr7 (480-560)||(5644669-5644749)
chr7 (481-560)||(29065812-29065891)
chr7 (488-560)||(6498752-6498824)
chr7 (485-552)||(43955514-43955581)
chr7 (485-559)||(2057392-2057466)
chr7 (486-552)||(40110735-40110801)
chr7 (488-553)||(23548605-23548670)
chr7 (483-560)||(40110825-40110902)
chr7 (485-560)||(31632719-31632794)
chr7 (490-552)||(43955609-43955671)
chr7 (489-553)||(9784925-9784989)
chr7 (488-560)||(26162124-26162196)
chr7 (488-554)||(34398941-34399008)
chr7 (485-560)||(35776942-35777017)
chr7 (480-553)||(14603256-14603329)
chr7 (488-553)||(28539162-28539227)
chr7 (488-551)||(2057491-2057554)
chr7 (486-553)||(30524253-30524320)
chr7 (488-559)||(34388353-34388424)
chr7 (486-553)||(39342636-39342703)
chr7 (486-560)||(25189213-25189287)
chr7 (488-554)||(29065912-29065978)
chr7 (486-560)||(29639202-29639276)
chr7 (488-553)||(35455804-35455869)
chr7 (482-553)||(23455241-23455312)
chr7 (484-554)||(40854062-40854133)
chr7 (485-560)||(44915192-44915267)
chr7 (488-554)||(5644770-5644836)
chr7 (486-535)||(29195707-29195756)
chr7 (488-552)||(18789241-18789305)
chr7 (494-554)||(21635978-21636038)
chr7 (488-548)||(46482044-46482104)
chr7 (486-554)||(49052784-49052851)
chr7 (485-552)||(34388262-34388329)
chr7 (481-523)||(40853980-40854022)
chr7 (514-560)||(43791116-43791162)
chr7 (518-560)||(46069421-46069463)
chr7 (492-533)||(30629061-30629102)
chr7 (486-523)||(31913234-31913271)
chr7 (486-554)||(21635883-21635951)
chr7 (492-552)||(49052880-49052937)
chr7 (484-519)||(30080811-30080846)
chr7 (488-523)||(32650591-32650626)
chr7 (485-548)||(46481943-46482006)
chr7 (317-355)||(4683790-4683828)
chr7 (492-554)||(15990895-15990957)
chr7 (489-523)||(30587909-30587943)
chr7 (492-545)||(34115649-34115702)
chr7 (497-545)||(22351874-22351922)
chr7 (508-536)||(22391598-22391626)
[»] chr3 (54 HSPs)
chr3 (482-560)||(44692909-44692987)
chr3 (484-560)||(27251981-27252057)
chr3 (484-548)||(44436254-44436318)
chr3 (488-560)||(46672803-46672875)
chr3 (486-560)||(9129431-9129505)
chr3 (486-560)||(9137538-9137612)
chr3 (484-552)||(49457339-49457407)
chr3 (485-553)||(34088568-34088636)
chr3 (487-552)||(5415782-5415847)
chr3 (488-553)||(36397996-36398061)
chr3 (483-560)||(42005953-42006030)
chr3 (496-560)||(19475824-19475888)
chr3 (492-560)||(21307532-21307600)
chr3 (496-560)||(31070415-31070478)
chr3 (488-552)||(44692822-44692886)
chr3 (488-560)||(47767432-47767504)
chr3 (474-560)||(28092200-28092286)
chr3 (488-554)||(39110394-39110460)
chr3 (488-553)||(48947605-48947670)
chr3 (488-552)||(5415878-5415942)
chr3 (484-536)||(35279926-35279978)
chr3 (488-560)||(37054394-37054466)
chr3 (488-552)||(37321550-37321614)
chr3 (485-553)||(53129850-53129918)
chr3 (486-552)||(9129342-9129408)
chr3 (486-552)||(9137449-9137515)
chr3 (485-553)||(671626-671694)
chr3 (485-544)||(46001361-46001420)
chr3 (486-544)||(7302344-7302402)
chr3 (494-552)||(44288467-44288525)
chr3 (488-553)||(53470436-53470501)
chr3 (486-523)||(54761583-54761620)
chr3 (482-554)||(46429489-46429561)
chr3 (488-552)||(46635857-46635921)
chr3 (480-523)||(332081-332124)
chr3 (506-560)||(30766571-30766625)
chr3 (488-554)||(31189403-31189469)
chr3 (488-554)||(47284319-47284385)
chr3 (484-545)||(42130688-42130749)
chr3 (475-551)||(30767091-30767167)
chr3 (485-548)||(40929605-40929667)
chr3 (521-560)||(44436345-44436384)
chr3 (488-523)||(46429414-46429449)
chr3 (506-545)||(50168625-50168664)
chr3 (491-554)||(52527039-52527102)
chr3 (317-355)||(7405980-7406018)
chr3 (489-523)||(38506895-38506929)
chr3 (490-523)||(27485474-27485507)
chr3 (486-523)||(37321622-37321659)
chr3 (486-523)||(55460356-55460393)
chr3 (488-532)||(2732639-2732683)
chr3 (489-533)||(8761970-8762014)
chr3 (490-554)||(39215931-39215995)
chr3 (480-536)||(47336873-47336929)
[»] chr8 (52 HSPs)
chr8 (474-560)||(36103087-36103173)
chr8 (480-554)||(40046796-40046870)
chr8 (488-560)||(3853616-3853688)
chr8 (488-560)||(3858074-3858146)
chr8 (488-553)||(33902667-33902732)
chr8 (482-552)||(17110964-17111034)
chr8 (485-554)||(17110866-17110935)
chr8 (486-554)||(42711373-42711441)
chr8 (488-560)||(44889354-44889426)
chr8 (488-554)||(28324679-28324745)
chr8 (484-553)||(33377315-33377384)
chr8 (488-560)||(515543-515615)
chr8 (486-545)||(1088303-1088362)
chr8 (481-552)||(4156262-4156333)
chr8 (488-551)||(14800056-14800119)
chr8 (486-545)||(14991690-14991749)
chr8 (494-552)||(8689138-8689196)
chr8 (486-560)||(23011732-23011806)
chr8 (484-553)||(14235-14303)
chr8 (488-553)||(29257369-29257434)
chr8 (491-560)||(35979015-35979084)
chr8 (506-554)||(13404920-13404968)
chr8 (488-560)||(24044960-24045032)
chr8 (490-553)||(29482825-29482888)
chr8 (485-560)||(33986001-33986076)
chr8 (492-553)||(44346696-44346757)
chr8 (492-548)||(30435250-30435306)
chr8 (486-533)||(27322687-27322734)
chr8 (485-536)||(32626069-32626120)
chr8 (482-560)||(33902753-33902831)
chr8 (485-523)||(30444963-30445001)
chr8 (486-523)||(42739947-42739984)
chr8 (506-554)||(8049272-8049320)
chr8 (490-554)||(13404829-13404893)
chr8 (488-548)||(31807409-31807468)
chr8 (281-367)||(2420566-2420657)
chr8 (488-523)||(7202934-7202969)
chr8 (484-523)||(14799975-14800014)
chr8 (488-542)||(37268112-37268166)
chr8 (486-523)||(7202863-7202900)
chr8 (482-523)||(29611382-29611423)
chr8 (490-554)||(3853709-3853773)
chr8 (490-554)||(3858167-3858231)
chr8 (518-554)||(38573488-38573524)
chr8 (506-554)||(40046883-40046931)
chr8 (488-523)||(8409947-8409982)
chr8 (488-523)||(34008799-34008834)
chr8 (486-548)||(11744742-11744804)
chr8 (506-560)||(35404753-35404807)
chr8 (486-523)||(36625255-36625292)
chr8 (488-536)||(9982637-9982684)
chr8 (526-554)||(42711324-42711352)
[»] chr6 (21 HSPs)
chr6 (485-560)||(28918162-28918237)
chr6 (482-554)||(34244987-34245059)
chr6 (490-560)||(6919710-6919780)
chr6 (488-554)||(9285647-9285713)
chr6 (482-560)||(29889435-29889513)
chr6 (488-552)||(776080-776144)
chr6 (482-546)||(6919808-6919872)
chr6 (480-552)||(8574687-8574759)
chr6 (484-552)||(8574760-8574828)
chr6 (485-552)||(776175-776242)
chr6 (490-560)||(9763014-9763084)
chr6 (492-560)||(15299512-15299579)
chr6 (486-545)||(9763114-9763173)
chr6 (488-560)||(13487275-13487347)
chr6 (501-560)||(15299412-15299471)
chr6 (488-545)||(1368477-1368534)
chr6 (488-528)||(33733432-33733472)
chr6 (485-521)||(1195348-1195384)
chr6 (485-523)||(8475176-8475214)
chr6 (317-355)||(15363551-15363589)
chr6 (492-553)||(15832470-15832531)
[»] chr4 (54 HSPs)
chr4 (485-552)||(36456021-36456088)
chr4 (484-554)||(7352905-7352975)
chr4 (484-560)||(1112601-1112677)
chr4 (488-552)||(14982280-14982344)
chr4 (488-560)||(49111399-49111471)
chr4 (488-554)||(857332-857398)
chr4 (488-554)||(15660276-15660342)
chr4 (496-560)||(1539649-1539713)
chr4 (482-554)||(10128067-10128139)
chr4 (488-560)||(31473849-31473921)
chr4 (488-552)||(36455907-36455971)
chr4 (485-560)||(4896719-4896794)
chr4 (493-552)||(28845876-28845935)
chr4 (488-554)||(28845964-28846030)
chr4 (487-537)||(31742874-31742924)
chr4 (486-560)||(41498577-41498651)
chr4 (489-546)||(4441338-4441395)
chr4 (491-560)||(10633035-10633104)
chr4 (488-560)||(11040968-11041039)
chr4 (482-569)||(5715738-5715825)
chr4 (490-548)||(7352814-7352872)
chr4 (488-554)||(11348330-11348396)
chr4 (486-560)||(42844541-42844615)
chr4 (488-553)||(2125857-2125922)
chr4 (488-560)||(467890-467960)
chr4 (488-560)||(16516171-16516243)
chr4 (482-554)||(26250903-26250975)
chr4 (488-552)||(55266870-55266934)
chr4 (483-554)||(4896643-4896714)
chr4 (488-550)||(1107149-1107211)
chr4 (486-552)||(42776635-42776701)
chr4 (485-554)||(15660180-15660249)
chr4 (488-553)||(35470122-35470187)
chr4 (490-535)||(42542979-42543024)
chr4 (488-560)||(1112709-1112781)
chr4 (486-552)||(41139473-41139537)
chr4 (484-554)||(1107047-1107118)
chr4 (490-554)||(31742778-31742842)
chr4 (515-552)||(857266-857303)
chr4 (487-548)||(12169019-12169078)
chr4 (486-523)||(21012596-21012633)
chr4 (515-560)||(29091164-29091209)
chr4 (490-554)||(10127976-10128040)
chr4 (490-554)||(42844636-42844700)
chr4 (487-542)||(10354341-10354396)
chr4 (488-523)||(26251015-26251050)
chr4 (526-560)||(4441415-4441449)
chr4 (494-536)||(9451157-9451199)
chr4 (486-532)||(52493924-52493969)
chr4 (486-523)||(14982385-14982422)
chr4 (488-552)||(41498489-41498554)
chr4 (490-523)||(42775625-42775658)
chr4 (486-523)||(54566188-54566225)
chr4 (520-560)||(16300220-16300260)
[»] chr1 (54 HSPs)
chr1 (483-554)||(27935578-27935649)
chr1 (486-552)||(15034657-15034723)
chr1 (486-560)||(23536065-23536139)
chr1 (486-560)||(26501080-26501154)
chr1 (487-561)||(32287933-32288007)
chr1 (488-560)||(15034746-15034818)
chr1 (486-559)||(4038073-4038146)
chr1 (483-560)||(34756422-34756499)
chr1 (480-560)||(8224760-8224840)
chr1 (488-560)||(30190223-30190295)
chr1 (482-560)||(43622979-43623057)
chr1 (488-560)||(24273221-24273293)
chr1 (486-552)||(27804360-27804426)
chr1 (478-552)||(47165221-47165295)
chr1 (488-552)||(4038170-4038234)
chr1 (492-560)||(27804269-27804337)
chr1 (485-560)||(38277412-38277487)
chr1 (488-554)||(6470693-6470759)
chr1 (483-548)||(29446745-29446810)
chr1 (491-548)||(45565397-45565454)
chr1 (491-552)||(51847855-51847916)
chr1 (490-554)||(50005172-50005236)
chr1 (473-560)||(50005064-50005151)
chr1 (483-560)||(28632587-28632663)
chr1 (488-553)||(32647301-32647366)
chr1 (490-554)||(40264123-40264187)
chr1 (488-560)||(44410311-44410383)
chr1 (488-543)||(32652206-32652261)
chr1 (491-554)||(37036956-37037019)
chr1 (485-560)||(39887124-39887199)
chr1 (485-560)||(49659214-49659288)
chr1 (500-560)||(31195468-31195528)
chr1 (489-545)||(32573024-32573080)
chr1 (490-554)||(38277508-38277571)
chr1 (485-545)||(44410413-44410473)
chr1 (483-523)||(45565500-45565540)
chr1 (485-528)||(5474414-5474457)
chr1 (484-523)||(15245456-15245495)
chr1 (490-545)||(28745799-28745854)
chr1 (497-560)||(37448402-37448465)
chr1 (497-560)||(44570687-44570750)
chr1 (506-560)||(946931-946985)
chr1 (488-553)||(946376-946440)
chr1 (486-535)||(31166308-31166357)
chr1 (490-554)||(34756520-34756584)
chr1 (483-523)||(41823180-41823220)
chr1 (86-126)||(44667583-44667623)
chr1 (493-560)||(28745883-28745950)
chr1 (488-523)||(32572940-32572975)
chr1 (518-552)||(5474494-5474528)
chr1 (485-523)||(50471765-50471803)
chr1 (495-560)||(37447903-37447968)
chr1 (486-523)||(40264046-40264083)
chr1 (487-535)||(10166498-10166546)
[»] chr2 (44 HSPs)
chr2 (486-560)||(14365698-14365772)
chr2 (488-553)||(14365793-14365858)
chr2 (487-560)||(14537198-14537271)
chr2 (488-560)||(11716408-11716480)
chr2 (486-560)||(27033488-27033562)
chr2 (485-553)||(3092279-3092347)
chr2 (488-560)||(41461602-41461674)
chr2 (481-554)||(17180290-17180363)
chr2 (485-560)||(10480116-10480191)
chr2 (485-554)||(784790-784859)
chr2 (488-552)||(784888-784952)
chr2 (485-545)||(11684596-11684656)
chr2 (485-553)||(33189265-33189333)
chr2 (486-553)||(769034-769101)
chr2 (486-553)||(11141303-11141370)
chr2 (490-560)||(11532254-11532324)
chr2 (490-560)||(11793897-11793967)
chr2 (475-553)||(35047687-35047765)
chr2 (488-553)||(1583817-1583882)
chr2 (491-554)||(28740599-28740662)
chr2 (486-545)||(39630223-39630282)
chr2 (486-552)||(14954264-14954330)
chr2 (496-545)||(11716501-11716550)
chr2 (488-560)||(13017779-13017851)
chr2 (496-560)||(30698289-30698353)
chr2 (488-552)||(45094480-45094544)
chr2 (480-535)||(7228038-7228093)
chr2 (488-551)||(10244177-10244240)
chr2 (486-523)||(11684696-11684733)
chr2 (515-560)||(32839649-32839694)
chr2 (485-560)||(17905651-17905726)
chr2 (494-560)||(40026070-40026136)
chr2 (482-523)||(3345757-3345798)
chr2 (485-542)||(41461512-41461569)
chr2 (483-523)||(14537305-14537345)
chr2 (483-523)||(19231305-19231345)
chr2 (494-545)||(29279035-29279086)
chr2 (514-560)||(7167668-7167714)
chr2 (488-554)||(8735844-8735910)
chr2 (485-523)||(41585710-41585748)
chr2 (490-560)||(44256194-44256263)
chr2 (494-523)||(11824704-11824733)
chr2 (490-523)||(11824786-11824819)
chr2 (483-523)||(11595332-11595372)
[»] scaffold0009 (2 HSPs)
scaffold0009 (488-560)||(41997-42069)
scaffold0009 (486-545)||(42080-42139)
[»] chr5 (60 HSPs)
chr5 (485-560)||(25935288-25935363)
chr5 (490-560)||(2721558-2721628)
chr5 (167-328)||(13541056-13541223)
chr5 (488-560)||(15373960-15374032)
chr5 (486-550)||(15374057-15374121)
chr5 (482-554)||(15804316-15804388)
chr5 (484-548)||(40643916-40643980)
chr5 (488-559)||(9764426-9764497)
chr5 (486-552)||(2316376-2316442)
chr5 (490-560)||(19533905-19533975)
chr5 (482-560)||(37722892-37722970)
chr5 (488-552)||(26281275-26281339)
chr5 (484-552)||(33245378-33245446)
chr5 (489-552)||(3563278-3563341)
chr5 (485-552)||(9764335-9764402)
chr5 (489-552)||(20523228-20523291)
chr5 (485-560)||(40090412-40090487)
chr5 (483-554)||(40809336-40809407)
chr5 (484-553)||(41762220-41762289)
chr5 (485-553)||(927299-927367)
chr5 (488-560)||(2316466-2316537)
chr5 (477-533)||(5658765-5658821)
chr5 (488-560)||(20523133-20523205)
chr5 (488-560)||(22303868-22303940)
chr5 (488-552)||(22766952-22767016)
chr5 (480-560)||(32390059-32390139)
chr5 (484-548)||(32470878-32470942)
chr5 (485-560)||(16515105-16515180)
chr5 (481-552)||(23092057-23092128)
chr5 (482-552)||(34982210-34982279)
chr5 (490-543)||(28828369-28828422)
chr5 (492-560)||(16515009-16515076)
chr5 (486-554)||(32250102-32250169)
chr5 (480-543)||(13243449-13243514)
chr5 (490-560)||(37145499-37145569)
chr5 (485-545)||(6634012-6634072)
chr5 (492-560)||(9894320-9894388)
chr5 (490-542)||(15804399-15804451)
chr5 (488-552)||(23091963-23092026)
chr5 (490-550)||(32389974-32390034)
chr5 (488-560)||(35379344-35379415)
chr5 (482-523)||(2550322-2550363)
chr5 (490-539)||(13243512-13243561)
chr5 (486-523)||(15270871-15270908)
chr5 (490-554)||(28828440-28828504)
chr5 (514-554)||(32470975-32471015)
chr5 (489-545)||(37090282-37090338)
chr5 (488-552)||(40809436-40809500)
chr5 (485-560)||(10314646-10314721)
chr5 (490-553)||(20320653-20320716)
chr5 (488-523)||(34982313-34982348)
chr5 (490-560)||(14834826-14834896)
chr5 (485-523)||(22305109-22305147)
chr5 (303-367)||(2166789-2166853)
chr5 (488-523)||(33146061-33146096)
chr5 (488-523)||(33146191-33146226)
chr5 (488-518)||(34105089-34105119)
chr5 (491-560)||(6634101-6634170)
chr5 (482-523)||(22302533-22302574)
chr5 (490-523)||(40643838-40643871)
[»] scaffold1562 (2 HSPs)
scaffold1562 (490-559)||(493-562)
scaffold1562 (485-551)||(402-468)
[»] scaffold1158 (2 HSPs)
scaffold1158 (490-559)||(2031-2100)
scaffold1158 (485-551)||(2125-2191)
[»] scaffold0169 (1 HSPs)
scaffold0169 (484-560)||(4071-4147)
[»] scaffold0027 (1 HSPs)
scaffold0027 (489-560)||(10887-10958)
[»] scaffold0048 (1 HSPs)
scaffold0048 (490-552)||(82945-83007)
[»] scaffold0301 (1 HSPs)
scaffold0301 (490-553)||(7153-7216)
[»] scaffold0400 (1 HSPs)
scaffold0400 (489-545)||(4514-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (489-545)||(5158-5214)
[»] scaffold0129 (2 HSPs)
scaffold0129 (490-560)||(19786-19855)
scaffold0129 (483-560)||(19193-19269)
[»] scaffold0044 (2 HSPs)
scaffold0044 (492-552)||(56369-56429)
scaffold0044 (518-559)||(56304-56345)
[»] scaffold0318 (1 HSPs)
scaffold0318 (488-545)||(2867-2924)
[»] scaffold0240 (1 HSPs)
scaffold0240 (488-523)||(17605-17640)
[»] scaffold0039 (1 HSPs)
scaffold0039 (488-523)||(109049-109084)
[»] scaffold0576 (1 HSPs)
scaffold0576 (317-355)||(8322-8360)
[»] scaffold0337 (1 HSPs)
scaffold0337 (486-551)||(15874-15938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (486-551)||(2916-2980)


Alignment Details
Target: chr7 (Bit Score: 440; Significance: 0; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 1 - 489
Target Start/End: Complemental strand, 24712426 - 24711936
Alignment:
Q  1 aatgcaacccagtatcagaattaagtaacttagttaagtaattttttatttgaaggaaacttagttaagtaattaaatccggcgaaatgttgaatgtagc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712426 aatgcaacccagtatcagaattaagtaacttagttaagtaattttttatttgaaggaaacttagttaagtaattaaatccggcgaaatgttgaatgtagc 24712327  T
Q  101 gaaaattaatttcacgagagcataacgaactatgtggtataacaacttgcctactgttttttctttcacagccgccaaaactagtcccatggcatctgtt 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  24712326 aaaaattaatttcacgagagcataacgaactatgtggtataacaacttgcctactgttttttctttcacaaccgccaaaactaatcccatggcatctgtt 24712227  T
Q  201 cagctctgc--gtgtgttttcacaccttgtgcgtttttggaagctctatttaatcacaagtcttttaattgatgnnnnnnnnttggacccaaattgagaa 298  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  24712226 cagctctgcatgtgtgttttcacaccttgtgcgtttttggaagctctatttaatcacaagtcttttaattgatgaaaaaaaattggacccaaattgagaa 24712127  T
Q  299 gtggaaagtagaacatgaatatttcagcatctaccattctaagagtaacaccacaagattcaacaatcatgtttctcatttctaatcaataatcatgatg 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712126 gtggaaagtagaacatgaatatttcagcatctaccattctaagagtaacaccacaagattcaacaatcatgtttctcatttctaatcaataatcatgatg 24712027  T
Q  399 taaatcgttatgttttgggtctctctcctcacactctttctcactttattatcttttctctatttatcttcacaaccaaacataccctaag 489  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24712026 taaatcgttaagttttgggtctctctcctcacactctttctcactttattatcttttctctatttatcttcacaaccaaacataccctaag 24711936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 5644669 - 5644749
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  5644669 atactctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 5644749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 481 - 560
Target Start/End: Original strand, 29065812 - 29065891
Alignment:
Q  481 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  29065812 taccttaagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 29065891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 6498824 - 6498752
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaa 6498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 552
Target Start/End: Original strand, 43955514 - 43955581
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactacttt 43955581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 485 - 559
Target Start/End: Original strand, 2057392 - 2057466
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtga 2057466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 40110735 - 40110801
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactacttt 40110801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 23548670 - 23548605
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttg 23548605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 40110902 - 40110825
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||| | ||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  40110902 ccctaagagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 40110825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 31632719 - 31632794
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  31632719 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 31632794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 490 - 552
Target Start/End: Complemental strand, 43955671 - 43955609
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactacttt 43955609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 489 - 553
Target Start/End: Complemental strand, 9784989 - 9784925
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttg 9784925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 26162196 - 26162124
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 26162124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 34399008 - 34398941
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg-aaattcaactactttga 554  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttga 34398941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 35777017 - 35776942
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  35777017 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 35776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 480 - 553
Target Start/End: Complemental strand, 14603329 - 14603256
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  14603329 atactctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 14603256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 28539227 - 28539162
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttg 28539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 551
Target Start/End: Complemental strand, 2057554 - 2057491
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactt 2057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 30524253 - 30524320
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  30524253 taagagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttg 30524320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 559
Target Start/End: Complemental strand, 34388424 - 34388353
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    |||||||||||| |||  ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtga 34388353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 553
Target Start/End: Complemental strand, 39342703 - 39342636
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 39342636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 25189287 - 25189213
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||  |||||||||||||| |||| |||||||||||| ||||||| |||||||| |||||    
T  25189287 taagagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaa 25189213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 29065978 - 29065912
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| || |||||    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttga 29065912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 29639276 - 29639202
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||||||||| || ||||| |||||    
T  29639276 taagagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaa 29639202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 35455804 - 35455869
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 35455869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 482 - 553
Target Start/End: Complemental strand, 23455312 - 23455241
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||| ||| ||||||||||||  ||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  23455312 acccttagaatgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttg 23455241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 484 - 554
Target Start/End: Complemental strand, 40854133 - 40854062
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga-ggaaattcaactactttga 554  Q
    ||||||||||||||||||||| | |||||| |||||||||||||| |||||| || ||||||||||||||||    
T  40854133 cctaagagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttga 40854062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 44915192 - 44915267
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||   |||| ||||||||||| |||||||||||| | |||||||||||||||| |||||    
T  44915192 ctaagagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaa 44915267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 5644836 - 5644770
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||| || |||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttga 5644770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 29195707 - 29195756
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 535  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29195707 taagagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 18789305 - 18789241
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||| ||||| ||||||| ||||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatacttt 18789241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 554
Target Start/End: Complemental strand, 21636038 - 21635978
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||| | |||||||||||||||||||||||||||| | |||| |||||||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttga 21635978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 548
Target Start/End: Complemental strand, 46482104 - 46482044
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    |||||||||||| |||||| ||||| |||| |||||||||||||||||| |||||||||||    
T  46482104 agagtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgagaaaattcaacta 46482044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 554
Target Start/End: Original strand, 49052784 - 49052851
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||||    |||||||||||| ||||||||||||||||  ||||||||||||||||    
T  49052784 taagagtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattcaactactttga 49052851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 552
Target Start/End: Original strand, 34388262 - 34388329
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||| | ||| |||||||| || |||||||| ||||  ||||||||||||||    
T  34388262 ctaagagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactacttt 34388329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 523
Target Start/End: Original strand, 40853980 - 40854022
Alignment:
Q  481 taccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||| ||||||||||||||||| ||||||||||||||||||    
T  40853980 tacccttagagtgtgtttggatgggggaatgttttgagggaat 40854022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 560
Target Start/End: Original strand, 43791116 - 43791162
Alignment:
Q  514 ttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaa 43791162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 560
Target Start/End: Original strand, 46069421 - 46069463
Alignment:
Q  518 gggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  46069421 gggaatgtaatgttttgagggaattcaactactttgaggtgaa 46069463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 492 - 533
Target Start/End: Original strand, 30629061 - 30629102
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgtttt 533  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgtttt 30629102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 31913234 - 31913271
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31913234 taagagtgtgtttggatgggggaatgttttgagggaat 31913271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 554
Target Start/End: Original strand, 21635883 - 21635951
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||| ||||||||  |||| |||||||| |||||||||||||||||  |||||| || |||||    
T  21635883 taagagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttga 21635951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 49052937 - 49052880
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  49052937 tgtgtttggatgg-ggaatgttt-gagg-aatgtaatgttttgagggaattcaactacttt 49052880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 519
Target Start/End: Complemental strand, 30080846 - 30080811
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagg 519  Q
    ||||||||||||||||||||| ||||||||||||||    
T  30080846 cctaagagtgtgtttggatgggggaatgttttgagg 30080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 32650591 - 32650626
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32650591 agagtgtgtttcgatggaggaatgttttgagggaat 32650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 548
Target Start/End: Original strand, 46481943 - 46482006
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||||||||   ||| ||| ||  ||||||||||||||||||||||| |||||    
T  46481943 ctaagagtgtgtttggatgggaaaatatttcgaaagaatgtaatgttttgaggaaatttaacta 46482006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 4683828 - 4683790
Alignment:
Q  317 atatttcagcatctaccattctaagagtaacaccacaag 355  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  4683828 atatctcagcatctaccattccaagagtaacaccacaag 4683790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 554
Target Start/End: Original strand, 15990895 - 15990957
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||| ||| ||| |||||||| |||||||||| |||| | ||||||| ||||||||    
T  15990895 tgtgtttggattgagtaatattttgaggtaatgtaatgtcttgaaggaattcaaatactttga 15990957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 523
Target Start/End: Complemental strand, 30587943 - 30587909
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||| ||||||||||||||||||    
T  30587943 gagtgtgtttggatgggggaatgttttgagggaat 30587909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 34115702 - 34115649
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||||||||||||||||  |||  |||||||||||  |||||||    
T  34115702 tgtgtttggatggaggaatgttttgagttaataaaatgttttgagataattcaa 34115649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 545
Target Start/End: Complemental strand, 22351922 - 22351874
Alignment:
Q  497 ttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||| ||||||||||| || ||||||||||||||||  |||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattcaa 22351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 536
Target Start/End: Complemental strand, 22391626 - 22391598
Alignment:
Q  508 aatgttttgagggaatgtaatgttttgag 536  Q
    |||||||||||||||||||||||||||||    
T  22391626 aatgttttgagggaatgtaatgttttgag 22391598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 7e-32; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 44692987 - 44692909
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  44692987 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 44692909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 560
Target Start/End: Complemental strand, 27252057 - 27251981
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  27252057 cctaagagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 27251981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 484 - 548
Target Start/End: Original strand, 44436254 - 44436318
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44436254 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaacta 44436318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 46672875 - 46672803
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 46672803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 9129505 - 9129431
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 9129431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 9137612 - 9137538
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 9137538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 552
Target Start/End: Original strand, 49457339 - 49457407
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  49457339 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaaccacttt 49457407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 485 - 553
Target Start/End: Original strand, 34088568 - 34088636
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||| |||||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttg 34088636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 487 - 552
Target Start/End: Original strand, 5415782 - 5415847
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  5415782 aagagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactacttt 5415847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 36398061 - 36397996
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttg 36397996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 42006030 - 42005953
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| || ||| |||| |||||    
T  42006030 ccctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtgaa 42005953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 496 - 560
Target Start/End: Original strand, 19475824 - 19475888
Alignment:
Q  496 tttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaa 19475888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 492 - 560
Target Start/End: Complemental strand, 21307600 - 21307532
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||| |||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaa 21307532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 496 - 560
Target Start/End: Original strand, 31070415 - 31070478
Alignment:
Q  496 tttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  31070415 tttggatgg-ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 31070478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 44692822 - 44692886
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccacttt 44692886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 47767432 - 47767504
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 47767504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 560
Target Start/End: Original strand, 28092200 - 28092286
Alignment:
Q  474 ccaaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||| | || ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| |||||||| |||||    
T  28092200 ccaaacattctcttagagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaa 28092286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 39110394 - 39110460
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||| || ||||||||||||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttga 39110460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 48947605 - 48947670
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttg 48947670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 5415942 - 5415878
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||| | ||||||||||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactacttt 5415878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 484 - 536
Target Start/End: Complemental strand, 35279978 - 35279926
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgag 536  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  35279978 cctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 35279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 37054394 - 37054466
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||| | ||||||| ||| |||| |||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 37054466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 37321550 - 37321614
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||| ||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaactacttt 37321614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 485 - 553
Target Start/End: Complemental strand, 53129918 - 53129850
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||| ||| ||||||| |||||||    
T  53129918 ctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttg 53129850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 9129342 - 9129408
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||  || | |||||||||||||||||||||||| | ||||||||||||||    
T  9129342 taagagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactacttt 9129408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 9137449 - 9137515
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||  || | |||||||||||||||||||||||| | ||||||||||||||    
T  9137449 taagagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactacttt 9137515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 485 - 553
Target Start/End: Complemental strand, 671694 - 671626
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||| ||||||| | ||||||||||||||||||||| |||||||||| ||||||  |||||||    
T  671694 ctaagagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattcagatactttg 671626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 544
Target Start/End: Original strand, 46001361 - 46001420
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattca 544  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||| |||| ||||||    
T  46001361 ctaagagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattca 46001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 7302344 - 7302402
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattca 544  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||| | ||||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattca 7302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 44288525 - 44288467
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||||||||| ||| ||||||||||| | ||||||| ||||||    
T  44288525 tgtttggatggaggaatgttttgaggtaatataatgttttgatggaattcaaatacttt 44288467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 53470501 - 53470436
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||  | |||||||||||||||| || |||||||||| ||||||| |||||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttg 53470436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 54761620 - 54761583
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54761620 taagagtgtgtttggatggaggaatgttttgagggaat 54761583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 46429561 - 46429489
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||| ||||||||||||||||  ||||| |||||||| ||||||||||||||| | ||||||| || |||||    
T  46429561 acccttagagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttga 46429489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 46635857 - 46635921
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||    |||||||||||  ||||||||||||||||||||||||| ||||||    
T  46635857 agagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattcaaatacttt 46635921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 480 - 523
Target Start/End: Complemental strand, 332124 - 332081
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  332124 ataccttaagagtgtgtttggatggaagaatgttttgagggaat 332081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 560
Target Start/End: Original strand, 30766571 - 30766625
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 30766625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 31189469 - 31189403
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||| |||   ||||||||||||| ||||||||||||||||  ||||||| ||||||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttga 31189403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 47284385 - 47284319
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttga 47284319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 42130688 - 42130749
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||| ||||||||||| ||| ||||| ||||||||  |||||||||||||||| |||||||    
T  42130688 cctaatagtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaa 42130749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 551
Target Start/End: Original strand, 30767091 - 30767167
Alignment:
Q  475 caaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    |||||| || || ||||||| ||||||||| | |||||||||||||||| ||||||| ||| | ||||||| |||||    
T  30767091 caaacacactcttagagtgtatttggatggggtaatgttttgagggaatctaatgttatgaaggaattcaaatactt 30767167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 548
Target Start/End: Original strand, 40929605 - 40929667
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    |||||||||||||||||||| |||||||||| || |||| |||||||  ||| |||||||||||    
T  40929605 ctaagagtgtgtttggatgg-ggaatgttttcagagaatataatgttcggagaaaattcaacta 40929667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 521 - 560
Target Start/End: Complemental strand, 44436384 - 44436345
Alignment:
Q  521 aatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaa 44436345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 46429414 - 46429449
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  46429414 agagtgtgtttggatgggggaatgttttgagggaat 46429449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 545
Target Start/End: Complemental strand, 50168664 - 50168625
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  50168664 ggaatgttttgaggtaatgtaatgttttgaggaaactcaa 50168625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 52527039 - 52527102
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||| |||||||||||| || |||||||||| ||  | ||||||| ||||||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttga 52527102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Complemental strand, 7406018 - 7405980
Alignment:
Q  317 atatttcagcatctaccattctaagagtaacaccacaag 355  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  7406018 atatctcagcatctaccattccaagagtaacaccacaag 7405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 489 - 523
Target Start/End: Complemental strand, 38506929 - 38506895
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||| ||||||||||||||||||||    
T  38506929 gagtgtgtttggatagaggaatgttttgagggaat 38506895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 523
Target Start/End: Original strand, 27485474 - 27485507
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||| ||||||||||||||||||    
T  27485474 agtgtgtttggatgggggaatgttttgagggaat 27485507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 37321659 - 37321622
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  37321659 taagagtgtgtttggattggggaatgttttgagggaat 37321622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 55460356 - 55460393
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  55460356 taagagcgtgtttggatgtaggaatgttttgagggaat 55460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 532
Target Start/End: Original strand, 2732639 - 2732683
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttt 532  Q
    ||||||||||||||||| | |||||||||||| ||| ||||||||    
T  2732639 agagtgtgtttggatggggaaatgttttgaggtaatataatgttt 2732683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 489 - 533
Target Start/End: Original strand, 8761970 - 8762014
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 533  Q
    |||||||||||||| ||| |||||||||||  |||||||||||||    
T  8761970 gagtgtgtttggattgagtaatgttttgagataatgtaatgtttt 8762014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 39215995 - 39215931
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||   |||| |||||||| ||| |||||||||||| |||||||| || |||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttga 39215931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 47336873 - 47336929
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgag 536  Q
    ||||||||| | ||||| ||||||| | |||||||| ||| ||||||||||||||||    
T  47336873 ataccctaaaaatgtgtgtggatggggaaatgttttaaggtaatgtaatgttttgag 47336929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 474 - 560
Target Start/End: Original strand, 36103087 - 36103173
Alignment:
Q  474 ccaaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  36103087 ccaaacaaaacctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgatgtgaa 36103173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 480 - 554
Target Start/End: Original strand, 40046796 - 40046870
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40046796 ataccctaagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttga 40046870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 3853616 - 3853688
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaa 3853688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 3858074 - 3858146
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaa 3858146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 33902667 - 33902732
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg 33902732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 552
Target Start/End: Complemental strand, 17111034 - 17110964
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17111034 acccttagagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactacttt 17110964  T

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Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 17110866 - 17110935
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttga 17110935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 486 - 554
Target Start/End: Complemental strand, 42711441 - 42711373
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42711441 taagagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttga 42711373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 44889354 - 44889426
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||| |||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaa 44889426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 28324745 - 28324679
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttga 28324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 33377384 - 33377315
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||||| |||||||||||||||||| || |||||||||| ||||||| |||||||    
T  33377384 cctaagagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttg 33377315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 515615 - 515543
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||| | ||||| |||||||| |||||    
T  515615 agagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttgatgtgaa 515543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 1088362 - 1088303
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  1088362 taagagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaa 1088303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 552
Target Start/End: Complemental strand, 4156333 - 4156262
Alignment:
Q  481 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||| ||| |||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||    
T  4156333 taccttaatagtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaactacttt 4156262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 488 - 551
Target Start/End: Complemental strand, 14800119 - 14800056
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactt 14800056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 14991690 - 14991749
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaa 14991749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 8689138 - 8689196
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||    
T  8689138 tgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattcaactacttt 8689196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 560
Target Start/End: Original strand, 23011732 - 23011806
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 23011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 14235 - 14303
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||| |||||||    
T  14235 cctaagagtgtgtttggatgg-ggaatgtttggagggaatgtaatgttttaagggaattcaaatactttg 14303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 29257434 - 29257369
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 29257369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 560
Target Start/End: Complemental strand, 35979084 - 35979015
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||| ||||||| |||||||| |||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaa 35979015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 506 - 554
Target Start/End: Complemental strand, 13404968 - 13404920
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13404968 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttga 13404920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 24044960 - 24045032
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 24045032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 29482888 - 29482825
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||| |||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttg 29482825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 33986001 - 33986076
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| ||||||| |||| | ||||||||||||||||  ||||||| |||||||| |||||    
T  33986001 ctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaa 33986076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 553
Target Start/End: Complemental strand, 44346757 - 44346696
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 44346696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 548
Target Start/End: Original strand, 30435250 - 30435306
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatttaacta 30435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 533
Target Start/End: Complemental strand, 27322734 - 27322687
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 533  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  27322734 taagagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 536
Target Start/End: Complemental strand, 32626120 - 32626069
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgag 536  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  32626120 ctaagagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 33902831 - 33902753
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattc-aactactttgacgtgaa 560  Q
    |||||||||||||||| |||||| |||||| |||||||||||||  |||||||||| ||||| ||||||||||| |||||    
T  33902831 accctaagagtgtgttgggatgggggaatg-tttgagggaatgttttgttttgagggaattcaaactactttgaggtgaa 33902753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 485 - 523
Target Start/End: Complemental strand, 30445001 - 30444963
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30445001 ctaagagtgtgtttggatggaggaatgttttgagggaat 30444963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 42739947 - 42739984
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42739947 taagagtgtgtttggatggaggaatgttttgagggaat 42739984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 506 - 554
Target Start/End: Original strand, 8049272 - 8049320
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  8049272 ggaatgttttgagggaatataatgttttgagggaattcaaatactttga 8049320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 13404829 - 13404893
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| | ||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttga 13404893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 548
Target Start/End: Original strand, 31807409 - 31807468
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||||   ||||||||||||| ||||||||||||||||| ||||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgttttgagggaattcaacta 31807468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 367
Target Start/End: Complemental strand, 2420657 - 2420566
Alignment:
Q  281 ttggacccaaattgagaagtgga-----aagtagaacatgaatatttcagcatctaccattctaagagtaacaccacaagattcaacaatca 367  Q
    |||||||||| ||||||||||||     |||||||||||| ||||  ||| |||||||| || || |||||||||||||| |||||||||||    
T  2420657 ttggacccaatttgagaagtggatgccaaagtagaacatggatatcacagaatctaccactccaaaagtaacaccacaaggttcaacaatca 2420566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 7202969 - 7202934
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||||||||    
T  7202969 agagtgtgtttggatggaggaatgttttgagggaat 7202934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 523
Target Start/End: Original strand, 14799975 - 14800014
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  14799975 cctaagagtgtgtttggatgggggaatgttttgagggaat 14800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 542
Target Start/End: Complemental strand, 37268166 - 37268112
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaatt 542  Q
    ||||||||||||||| | ||||| |||||||| ||||||||||||||||| ||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatt 37268112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 7202863 - 7202900
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||| |||||||||||||||||    
T  7202863 taagagtgtgtttggatggatgaatgttttgagggaat 7202900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 523
Target Start/End: Original strand, 29611382 - 29611423
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  29611382 acccttagagtgtgtttggatgggggaatgttttgagggaat 29611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 3853773 - 3853709
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| | ||| |||||||| |||||||||||| |||| ||||||| || |||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttga 3853709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 3858231 - 3858167
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| | ||| |||||||| |||||||||||| |||| ||||||| || |||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttga 3858167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 518 - 554
Target Start/End: Complemental strand, 38573524 - 38573488
Alignment:
Q  518 gggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||| |||||||||||||||||||||||||||    
T  38573524 gggaatgtagtgttttgaggaaattcaactactttga 38573488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 506 - 554
Target Start/End: Complemental strand, 40046931 - 40046883
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||| ||||||||||||||||| ||||||| || |||||    
T  40046931 ggaatgttttgaggtaatgtaatgttttgagggaattcaattattttga 40046883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 8409982 - 8409947
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||||||||||| |||||||    
T  8409982 agagtgtgtttggatggaggaatgttttaagggaat 8409947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 34008799 - 34008834
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34008799 agagtgtgtttggatgggggaatgttttgagggaat 34008834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 548
Target Start/End: Complemental strand, 11744804 - 11744742
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||||||   |||| ||| |||||||||||||||| ||| | ||||||||||    
T  11744804 taagagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaacta 11744742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 506 - 560
Target Start/End: Complemental strand, 35404807 - 35404753
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||  |||| |||||||| |||||||||||||||| |||||||| |||||    
T  35404807 ggaatgttacgaggtaatgtaatattttgaggaaattcaaatactttgaggtgaa 35404753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 36625292 - 36625255
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  36625292 taagagtgtgtttggatgaaggaatattttgagggaat 36625255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 488 - 536
Target Start/End: Original strand, 9982637 - 9982684
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgag 536  Q
    |||| |||||||||||||| |||||||| ||| ||||||||||||||||    
T  9982637 agagcgtgtttggatggag-aatgttttaaggtaatgtaatgttttgag 9982684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 526 - 554
Target Start/End: Original strand, 42711324 - 42711352
Alignment:
Q  526 aatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||||||||    
T  42711324 aatgttttgaggaaattcaactactttga 42711352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 1e-27; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 28918162 - 28918237
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaa 28918237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 34245059 - 34244987
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  34245059 acccttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 34244987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 560
Target Start/End: Original strand, 6919710 - 6919780
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 6919780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 9285647 - 9285713
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttga 9285713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 29889513 - 29889435
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||| |||||    
T  29889513 acccttagagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaa 29889435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 776080 - 776144
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 776144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 482 - 546
Target Start/End: Complemental strand, 6919872 - 6919808
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaac 546  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  6919872 accctaagagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaac 6919808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 480 - 552
Target Start/End: Original strand, 8574687 - 8574759
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||||    
T  8574687 atacccttagagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaactacttt 8574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 484 - 552
Target Start/End: Complemental strand, 8574828 - 8574760
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||||||||||    
T  8574828 cctaagagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaactacttt 8574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 552
Target Start/End: Complemental strand, 776242 - 776175
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||    
T  776242 ctaagagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 776175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 490 - 560
Target Start/End: Original strand, 9763014 - 9763084
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 9763084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 492 - 560
Target Start/End: Complemental strand, 15299579 - 15299512
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  15299579 tgtgtttggatgg-ggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaa 15299512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 9763173 - 9763114
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||    
T  9763173 taagagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaa 9763114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 13487275 - 13487347
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||| ||||| ||||||| |||||||| |||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtgaa 13487347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 501 - 560
Target Start/End: Original strand, 15299412 - 15299471
Alignment:
Q  501 atggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||||    
T  15299412 atggaggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtgaa 15299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 1368477 - 1368534
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaa 1368534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 528
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaat 528  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 521
Target Start/End: Original strand, 1195348 - 1195384
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgaggga 521  Q
    |||||||||||||||||||| ||||||||||||||||    
T  1195348 ctaagagtgtgtttggatgggggaatgttttgaggga 1195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 8475176 - 8475214
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  8475176 ctaagagtgtgtttggatggggaaatgttttgagggaat 8475214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 15363551 - 15363589
Alignment:
Q  317 atatttcagcatctaccattctaagagtaacaccacaag 355  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  15363551 atatctcagcatctaccattccaagagtaacaccacaag 15363589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 553
Target Start/End: Original strand, 15832470 - 15832531
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||  | ||||||| || ||||||||||||||| ||| ||||||| |||||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaaatactttg 15832531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 485 - 552
Target Start/End: Complemental strand, 36456088 - 36456021
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36456088 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaactacttt 36456021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 554
Target Start/End: Complemental strand, 7352975 - 7352905
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  7352975 cctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttga 7352905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 560
Target Start/End: Original strand, 1112601 - 1112677
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||| |||||    
T  1112601 cctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtgaa 1112677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 14982280 - 14982344
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatttaactacttt 14982344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 49111471 - 49111399
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaa 49111399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 857398 - 857332
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttga 857332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 15660342 - 15660276
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttga 15660276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 496 - 560
Target Start/End: Original strand, 1539649 - 1539713
Alignment:
Q  496 tttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaa 1539713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 482 - 554
Target Start/End: Complemental strand, 10128139 - 10128067
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  10128139 acccttagagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttga 10128067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 31473849 - 31473921
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 31473921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 36455907 - 36455971
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactacttt 36455971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 4896794 - 4896719
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||| ||||||||||||||| | ||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  4896794 ctaatagtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 4896719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 493 - 552
Target Start/End: Original strand, 28845876 - 28845935
Alignment:
Q  493 gtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactacttt 28845935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 28846030 - 28845964
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttga 28845964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 487 - 537
Target Start/End: Complemental strand, 31742924 - 31742874
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 537  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31742924 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 41498651 - 41498577
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| || ||||| |||||    
T  41498651 taagagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaa 41498577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 489 - 546
Target Start/End: Original strand, 4441338 - 4441395
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaac 546  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaac 4441395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 491 - 560
Target Start/End: Original strand, 10633035 - 10633104
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 10633104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 11040968 - 11041039
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||| |||||    
T  11040968 agagtgtgtttggatgg-ggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaa 11041039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 482 - 569
Target Start/End: Original strand, 5715738 - 5715825
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaaaattgatga 569  Q
    ||||| ||||||||||||||||  |||||||||||||  ||||||||||||||||| ||||||| |||||||| |||| |||| ||||    
T  5715738 acccttagagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttgatgtgagaatttatga 5715825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 490 - 548
Target Start/End: Original strand, 7352814 - 7352872
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaacta 7352872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 11348396 - 11348330
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaacaactttga 11348330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 486 - 560
Target Start/End: Original strand, 42844541 - 42844615
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||| | ||||| ||||||||||||||||||||||| |||||| | |||||||||||||||| |||||    
T  42844541 taagagtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaa 42844615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 2125857 - 2125922
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||||| |||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttg 2125922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 467960 - 467890
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||| |||||    
T  467960 agagtgtgtttggatggag-aatgttttgatggaatgtaatgttttgagg-aattcaaccactttgaagtgaa 467890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 16516171 - 16516243
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| | |||| || |||||||| |||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttgatgtgaa 16516243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 26250903 - 26250975
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||| ||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  26250903 accctaatagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttga 26250975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 55266934 - 55266870
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||| ||||||||||||| ||| |||| |||||||| ||||||||||||||    
T  55266934 agagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaactacttt 55266870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 4896643 - 4896714
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  4896643 cccttagagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttga 4896714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 488 - 550
Target Start/End: Complemental strand, 1107211 - 1107149
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactact 550  Q
    ||||||| ||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||||    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactact 1107149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 42776635 - 42776701
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||| ||||||||| |||  ||||||||||||||| |||||||| ||||||    
T  42776635 taagagtgtgtttggatggaagaatgtttttaggttatgtaatgttttgagtaaattcaaatacttt 42776701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 15660180 - 15660249
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||| | ||||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  15660180 ctaagagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttga 15660249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 35470122 - 35470187
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||| ||||| | ||||||||||||||||||| |||||||||| ||||||| |||||||    
T  35470122 agagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttg 35470187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 490 - 535
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 535  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 1112781 - 1112709
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||| ||||||||||| || ||||||||||  |||||||||||| |||| |||||||||||||||| |||||    
T  1112781 agagtttgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgaggtgaa 1112709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 41139473 - 41139537
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||| |||| | ||||||| ||||||||||||||||||||||||| ||||||    
T  41139473 taagagtgtgtttggatgg-ggaa-gctttgaggtaatgtaatgttttgaggaaattcaaatacttt 41139537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 554
Target Start/End: Original strand, 1107047 - 1107118
Alignment:
Q  484 cctaagagtgtgtttggatggaggaa--tgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||| |||||  | |||| ||||||||||||||||||| | ||||||||||||||||    
T  1107047 cctaagagtgtgtttggatg-aggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttga 1107118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 31742778 - 31742842
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||||||| |||| ||| | ||||||||||||||| ||||||| || |||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttga 31742842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 515 - 552
Target Start/End: Original strand, 857266 - 857303
Alignment:
Q  515 tgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactacttt 857303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 487 - 548
Target Start/End: Original strand, 12169019 - 12169078
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    |||||||| |||||||  |||||||||||||||||| |||||||||||| ||||||||||||    
T  12169019 aagagtgtatttggata-aggaatgttttgagggaaagtaatgttttga-gaaattcaacta 12169078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 21012633 - 21012596
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21012633 taagagtgtgtttggatggacgaatgttttgagggaat 21012596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 515 - 560
Target Start/End: Original strand, 29091164 - 29091209
Alignment:
Q  515 tgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaa 29091209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Original strand, 10127976 - 10128040
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||| | ||||||| || |||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttga 10128040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 42844700 - 42844636
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| | ||| |||||||| ||||||||||||||||| || |||| || |||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttga 42844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 487 - 542
Target Start/End: Original strand, 10354341 - 10354396
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaatt 542  Q
    |||||||||||| |||  | ||||||||||||| |||||||||||||||| |||||    
T  10354341 aagagtgtgtttagataaatgaatgttttgaggtaatgtaatgttttgagaaaatt 10354396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 26251050 - 26251015
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26251050 agagtgtgtttggatgggggaatgttttgagggaat 26251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 526 - 560
Target Start/End: Complemental strand, 4441449 - 4441415
Alignment:
Q  526 aatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||||||||| |||||    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaa 4441415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 536
Target Start/End: Complemental strand, 9451199 - 9451157
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaatgtaatgttttgag 536  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  9451199 tgtttggatgaaggaatgttttaaggtaatgtaatgttttgag 9451157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 532
Target Start/End: Original strand, 52493924 - 52493969
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttt 532  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||    
T  52493924 taagagtgtgtttggatgg-ggaatgttttgaagtaatgtaatgttt 52493969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 14982422 - 14982385
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  14982422 taagagtgtgtttggatgggggaatcttttgagggaat 14982385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 41498489 - 41498554
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatg-ttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| ||| ||||||||| |||  ||||| |||||||| |||||||| |||||    
T  41498489 agagtgtgtttggatgggggattgttttgagagaaaataatgtttttgagggaattcaaccacttt 41498554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 523
Target Start/End: Original strand, 42775625 - 42775658
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||| ||||||||||||||||||    
T  42775625 agtgtgtttggatgggggaatgttttgagggaat 42775658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 54566188 - 54566225
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||| | |||||||||||||||||    
T  54566188 taagagtgtgtttggatgaaagaatgttttgagggaat 54566225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 520 - 560
Target Start/End: Complemental strand, 16300260 - 16300220
Alignment:
Q  520 gaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||| |||||||| |||||    
T  16300260 gaatgtaatgttttgagaaaattcaaatactttgaggtgaa 16300220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 27935649 - 27935578
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27935649 ccctaagagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttga 27935578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 15034657 - 15034723
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactacttt 15034723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 560
Target Start/End: Original strand, 23536065 - 23536139
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 23536139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 560
Target Start/End: Complemental strand, 26501154 - 26501080
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaa 26501080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 487 - 561
Target Start/End: Complemental strand, 32288007 - 32287933
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaaa 561  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttgaagtgaaa 32287933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 15034818 - 15034746
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 15034746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 486 - 559
Target Start/End: Original strand, 4038073 - 4038146
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  4038073 taagagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtga 4038146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 34756422 - 34756499
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  34756422 cccttagagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 34756499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 8224760 - 8224840
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| || |||||||| |||||    
T  8224760 ataccctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaa 8224840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 30190295 - 30190223
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaa 30190223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 43623057 - 43622979
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| || |||||||| |||||    
T  43623057 accctaagagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtgaa 43622979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 24273293 - 24273221
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 24273221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 486 - 552
Target Start/End: Complemental strand, 27804426 - 27804360
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| || | ||||||||||||||    
T  27804426 taagagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactacttt 27804360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 478 - 552
Target Start/End: Complemental strand, 47165295 - 47165221
Alignment:
Q  478 acataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||    
T  47165295 acatacctttagagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatacttt 47165221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 4038234 - 4038170
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttt 4038170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 492 - 560
Target Start/End: Original strand, 27804269 - 27804337
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaa 27804337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 38277412 - 38277487
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||   |||| |||||||||||||||||||||||| | |||||||||||||||| |||||    
T  38277412 ctaagagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaa 38277487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 6470759 - 6470693
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttga 6470693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 548
Target Start/End: Original strand, 29446745 - 29446810
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||||| | || |||||||||||| ||||||||||||||||||| ||||||||||    
T  29446745 ccctaagagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattcaacta 29446810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 548
Target Start/End: Original strand, 45565397 - 45565454
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaacta 45565454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 552
Target Start/End: Original strand, 51847855 - 51847916
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatacttt 51847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 50005236 - 50005172
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttga 50005172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 473 - 560
Target Start/End: Original strand, 50005064 - 50005151
Alignment:
Q  473 accaaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||  ||| ||||||||||||||||||  ||||| ||||||| |||||||||||||||||  ||||||||| |||||| |||||    
T  50005064 accaaacggaccataagagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaa 50005151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 560
Target Start/End: Complemental strand, 28632663 - 28632587
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||| ||||||||||||||  ||||||||| |||||||||||||||||||||  ||||||| |||||||| |||||    
T  28632663 ccctaatagtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaa 28632587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 32647301 - 32647366
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||| |||||| ||||||||||||||| | |||||| |||||||||||||||||| |||||||    
T  32647301 agagtgtatttggacggaggaatgttttgaagaaatgtattgttttgaggaaattcaaatactttg 32647366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 40264187 - 40264123
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttga 40264123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 44410311 - 44410383
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||| ||  |||||||||| ||||| |||||    
T  44410311 agagtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaa 44410383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 543
Target Start/End: Original strand, 32652206 - 32652261
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattc 543  Q
    ||||||| ||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  32652206 agagtgtatttggatggagaaatgttttgaggaaatgtattgttttgaggaaattc 32652261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 37037019 - 37036956
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||| ||||||| || |||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttga 37036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 39887124 - 39887199
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||| ||||  |||||||||| ||||||| | ||||||||| ||||||||| |||||||| |||||    
T  39887124 ctaagagtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaa 39887199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 49659214 - 49659288
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||  |||| |||| || |||||||| |||||    
T  49659214 ctaagagtgtgtttggatgg-ggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaa 49659288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 560
Target Start/End: Original strand, 31195468 - 31195528
Alignment:
Q  500 gatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||| |||||||||||||||||||| |||||||||| || || ||||| |||||    
T  31195468 gatggaggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaa 31195528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 32573080 - 32573024
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||| |||||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaa 32573024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 38277571 - 38277508
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  38277571 agtgtgtttggatgg-ggaatattttgaggtaatgtaatgttttgagggaattcaattattttga 38277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 545
Target Start/End: Complemental strand, 44410473 - 44410413
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||||||| | ||||| |||||||| ||||||| ||||||||| |||||||    
T  44410473 ctaagagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaa 44410413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 45565540 - 45565500
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  45565540 ccctaagagtgtgtttggatggaagaatgttttgagggaat 45565500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 528
Target Start/End: Original strand, 5474414 - 5474457
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaat 528  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  5474414 ctaagagtgtgtttggatgggggaatgttttgagggaatttaat 5474457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 523
Target Start/End: Original strand, 15245456 - 15245495
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  15245456 cctaagagtgtgtttggatgggggaatgttttgagggaat 15245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 545
Target Start/End: Original strand, 28745799 - 28745854
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||| ||||||||| ||||| |||||||||||||||||| ||||||| |||||||    
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaa 28745854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 560
Target Start/End: Complemental strand, 37448465 - 37448402
Alignment:
Q  497 ttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||  ||||||||||||| |||||||||||||||||| |||| || |||||||| |||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaa 37448402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 497 - 560
Target Start/End: Original strand, 44570687 - 44570750
Alignment:
Q  497 ttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||  ||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 44570750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 560
Target Start/End: Original strand, 946931 - 946985
Alignment:
Q  506 ggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||| | |||||||||||||||| |||| ||| |||||    
T  946931 ggaatgttttgagggaatgtattattttgaggaaattcaaatactatgaggtgaa 946985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 946376 - 946440
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||| || |||| |||||||||||||| |||||||||| |||| || |||||||    
T  946376 agagtgtgtttggatg-agaaatgctttgagggaatgtattgttttgagggaatttaaatactttg 946440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 31166308 - 31166357
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 535  Q
    ||||||||||||||||||  |||||||||||||  |||||||||||||||    
T  31166308 taagagtgtgtttggatgagggaatgttttgagataatgtaatgttttga 31166357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 34756584 - 34756520
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| | ||| |||||||| ||| ||||||||||||| ||||||| || |||||    
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttga 34756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 41823220 - 41823180
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  41823220 ccctaagagtgtgtttggatgggggaatgttttgaaggaat 41823180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 44667623 - 44667583
Alignment:
Q  86 aatgttgaatgtagcgaaaattaatttcacgagagcataac 126  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  44667623 aatgttgaatgtagcgaaacttaatttcacaagagcataac 44667583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 560
Target Start/End: Complemental strand, 28745950 - 28745883
Alignment:
Q  493 gtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||   |||| |||| |||||||||||| |||||||| |||||||||| ||||| |||||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaa 28745883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 32572940 - 32572975
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  32572940 agagtgtgtttggatgggggaatgttttgagggaat 32572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 518 - 552
Target Start/End: Complemental strand, 5474528 - 5474494
Alignment:
Q  518 gggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||| ||||||||||||||    
T  5474528 gggaatgtaatgttttgagggaattcaactacttt 5474494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 50471765 - 50471803
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  50471765 ctaagagtgtgtttggatgggggaaagttttgagggaat 50471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 560
Target Start/End: Complemental strand, 37447968 - 37447903
Alignment:
Q  495 gtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||| | ||||| ||| |||||||||||||||||||| | ||||||| ||| |||| |||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 37447903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 40264046 - 40264083
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  40264046 taagagtgtgtttggataggggaatgttttgagggaat 40264083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 10166498 - 10166546
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 535  Q
    |||||||||||||||||   |||||||||| || |||||||||||||||    
T  10166498 aagagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttga 10166546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 560
Target Start/End: Original strand, 14365698 - 14365772
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 14365772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 14365858 - 14365793
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg 14365793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 487 - 560
Target Start/End: Original strand, 14537198 - 14537271
Alignment:
Q  487 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaa 14537271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 11716408 - 11716480
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 11716480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 486 - 560
Target Start/End: Original strand, 27033488 - 27033562
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaa 27033562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 485 - 553
Target Start/End: Original strand, 3092279 - 3092347
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  3092279 ctaagagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttg 3092347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 41461674 - 41461602
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaa 41461602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 17180290 - 17180363
Alignment:
Q  481 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  17180290 taccttaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttga 17180363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 10480116 - 10480191
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||||| |||||||| |||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaa 10480191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 485 - 554
Target Start/End: Original strand, 784790 - 784859
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||| | |||| |||||||||||    
T  784790 ctaagagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttga 784859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 784952 - 784888
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactacttt 784888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 485 - 545
Target Start/End: Original strand, 11684596 - 11684656
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11684596 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 485 - 553
Target Start/End: Complemental strand, 33189333 - 33189265
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  33189333 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 33189265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 769034 - 769101
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 769101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 11141303 - 11141370
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 11141370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 11532324 - 11532254
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||| |||||||| |||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaa 11532254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 490 - 560
Target Start/End: Original strand, 11793897 - 11793967
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 11793967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 475 - 553
Target Start/End: Complemental strand, 35047765 - 35047687
Alignment:
Q  475 caaacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||| |||||| |||||| ||| ||||||| |||||||    
T  35047765 caaacagacccttagagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttg 35047687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 1583882 - 1583817
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 1583817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 554
Target Start/End: Original strand, 28740599 - 28740662
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 28740662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 486 - 545
Target Start/End: Original strand, 39630223 - 39630282
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||| |||||||    
T  39630223 taagagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaa 39630282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 14954264 - 14954330
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||| ||  ||||||||||||||    
T  14954264 taagagtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaactacttt 14954330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 496 - 545
Target Start/End: Complemental strand, 11716550 - 11716501
Alignment:
Q  496 tttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 13017779 - 13017851
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||  | ||||||||||||||||||||| |||| ||| ||||||| |||||||| |||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaa 13017851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 496 - 560
Target Start/End: Original strand, 30698289 - 30698353
Alignment:
Q  496 tttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 30698353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 45094544 - 45094480
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||| |||  |||||||||||||||||| ||||||||||||| |||| |||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactacttt 45094480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 535
Target Start/End: Complemental strand, 7228093 - 7228038
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 535  Q
    ||||| ||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  7228093 ataccttaagagtgtgtttggatggggaaatgttttgagagaatgtaatgttttga 7228038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 551
Target Start/End: Original strand, 10244177 - 10244240
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    |||||||||||||||||  |||| || |||||||| |||||||||||||| |||||||||||||    
T  10244177 agagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattcaactactt 10244240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 11684733 - 11684696
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11684733 taagagtgtgtttggatggaggaatgttttgagggaat 11684696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 32839694 - 32839649
Alignment:
Q  515 tgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaa 32839649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 17905651 - 17905726
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||| |||||  ||||||||||||| |||||||||||||| | | ||||||| || ||||| |||||    
T  17905651 ctaagagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaa 17905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 560
Target Start/End: Original strand, 40026070 - 40026136
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||| |||| ||||| |||||||| ||| |||||||||||||||||| || |||||||| |||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatttaaatactttgaggtgaa 40026136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 482 - 523
Target Start/End: Original strand, 3345757 - 3345798
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  3345757 accctaaaagtgtgtttggatgggggaatgttttgagggaat 3345798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 542
Target Start/End: Original strand, 41461512 - 41461569
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaatt 542  Q
    |||| ||||||||||||||| | ||| |||||||| ||||||||||||||||| ||||    
T  41461512 ctaatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatt 41461569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 14537345 - 14537305
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  14537345 cccttagagtgtgtttggatgggggaatgttttgagggaat 14537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 523
Target Start/End: Complemental strand, 19231345 - 19231305
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  19231345 ccctaagattgtgtttggatgggggaatgttttgagggaat 19231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 545
Target Start/End: Complemental strand, 29279086 - 29279035
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||| ||||||||||||||| |||||||||||| |||  |||||||    
T  29279086 tgtttggatgaaggaatgttttgaggtaatgtaatgtttcgagataattcaa 29279035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 514 - 560
Target Start/End: Complemental strand, 7167714 - 7167668
Alignment:
Q  514 ttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||| | ||||||| |||||||| |||||    
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtgaa 7167668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 554
Target Start/End: Original strand, 8735844 - 8735910
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||    ||||||||||||||| |||||||  |||| ||||||| ||||||||    
T  8735844 agagtgtgtttggatgggaacatgttttgagggaatataatgttacgagggaattcaaatactttga 8735910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 523
Target Start/End: Complemental strand, 41585748 - 41585710
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  41585748 ctaagagtgtgtttggatggtgaaatgttttgagggaat 41585710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 44256263 - 44256194
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||| ||||| ||| |||| ||||||||||||||||| ||||| | || ||||| |||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaa 44256194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 523
Target Start/End: Original strand, 11824704 - 11824733
Alignment:
Q  494 tgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||    
T  11824704 tgtttggatggaggaatgttttgagggaat 11824733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 523
Target Start/End: Complemental strand, 11824819 - 11824786
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||| ||||||||||||||||||    
T  11824819 agtgtgtttggatgggggaatgttttgagggaat 11824786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 523
Target Start/End: Original strand, 11595332 - 11595372
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||| ||||||||||||||| | ||||||||||||||||    
T  11595332 ccctaatagtgtgtttggatggggtaatgttttgagggaat 11595372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 7e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 41997 - 42069
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 42069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 486 - 545
Target Start/End: Complemental strand, 42139 - 42080
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||    
T  42139 taagagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaa 42080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 25935363 - 25935288
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  25935363 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaa 25935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 2721628 - 2721558
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 2721558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 167 - 328
Target Start/End: Complemental strand, 13541223 - 13541056
Alignment:
Q  167 cacagccgccaaaactagtcccatggcatctgttcagctctgcgtgtgt--tttcacaccttgtgcgtttttggaagc----tctatttaatcacaagtc 260  Q
    |||| |||||||| ||||| |||||| |||| | |||| ||||||||||  ||||||||||||||| |||||||||||    ||||||||||||||||||    
T  13541223 cacacccgccaaacctagttccatgggatctatccagcactgcgtgtgtgttttcacaccttgtgcttttttggaagctccatctatttaatcacaagtc 13541124  T
Q  261 t-tttaattgatgnnnnnnnnttggacccaaattgagaagtggaaagtagaacatgaatatttcagcat 328  Q
    | | |||||||||         |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  13541123 tgtctaattgatgaaagaaag-tggacccaaattgagaagtggaaaatagaacatggatatttcagcat 13541056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 15373960 - 15374032
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 15374032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 486 - 550
Target Start/End: Complemental strand, 15374121 - 15374057
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactact 550  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactact 15374057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 554
Target Start/End: Original strand, 15804316 - 15804388
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  15804316 accctgagagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttga 15804388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 548
Target Start/End: Complemental strand, 40643980 - 40643916
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  40643980 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta 40643916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 488 - 559
Target Start/End: Complemental strand, 9764497 - 9764426
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtga 9764426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 2316376 - 2316442
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2316376 taagagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactacttt 2316442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 19533975 - 19533905
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| |||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaa 19533905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 482 - 560
Target Start/End: Complemental strand, 37722970 - 37722892
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  37722970 acccttagagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaa 37722892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 26281339 - 26281275
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactacttt 26281275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 484 - 552
Target Start/End: Complemental strand, 33245446 - 33245378
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  33245446 cctatgagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaactacttt 33245378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 552
Target Start/End: Original strand, 3563278 - 3563341
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaactacttt 3563341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 552
Target Start/End: Original strand, 9764335 - 9764402
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttt 9764402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 552
Target Start/End: Complemental strand, 20523291 - 20523228
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactacttt 20523228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 40090487 - 40090412
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||| |||||||| |||||    
T  40090487 ctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaa 40090412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 40809336 - 40809407
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||| | ||||||||||| |||| ||||||||||||| ||||||||||||||||    
T  40809336 ccctaagagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttga 40809407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 41762289 - 41762220
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  41762289 cctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 41762220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 485 - 553
Target Start/End: Original strand, 927299 - 927367
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||| |||||||    
T  927299 ctaagagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttg 927367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 2316537 - 2316466
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  2316537 agagtgtgtttggatggaa-aatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaa 2316466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 477 - 533
Target Start/End: Original strand, 5658765 - 5658821
Alignment:
Q  477 aacataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgtttt 533  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5658765 aacaaaccctaagagtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 20523133 - 20523205
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||  |||||||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaa 20523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 560
Target Start/End: Complemental strand, 22303940 - 22303868
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaa 22303868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 22766952 - 22767016
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatacttt 22767016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 480 - 560
Target Start/End: Complemental strand, 32390139 - 32390059
Alignment:
Q  480 ataccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||| ||||||||||||||||||    |||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  32390139 atactctaagagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaa 32390059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 484 - 548
Target Start/End: Original strand, 32470878 - 32470942
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaacta 548  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  32470878 cctaagagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaacta 32470942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 485 - 560
Target Start/End: Complemental strand, 16515180 - 16515105
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||   ||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||    
T  16515180 ctaagagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtgaa 16515105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 481 - 552
Target Start/End: Complemental strand, 23092128 - 23092057
Alignment:
Q  481 taccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||| ||||||||||||||||||| ||||||||||||  |||||||||||||||||| | ||||||||||||    
T  23092128 taccataagagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactacttt 23092057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 482 - 552
Target Start/End: Original strand, 34982210 - 34982279
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |||||    
T  34982210 accctaagagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaaccacttt 34982279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 490 - 543
Target Start/End: Original strand, 28828369 - 28828422
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattc 543  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 492 - 560
Target Start/End: Original strand, 16515009 - 16515076
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||| |||||| |||||    
T  16515009 tgtgtttggatggag-aatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtgaa 16515076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 554
Target Start/End: Complemental strand, 32250169 - 32250102
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| ||| ||||    
T  32250169 taagagtgtgtttggatgg-ggaatgttttgagggaaagtaatgttttgagggaattcaaataccttga 32250102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 480 - 543
Target Start/End: Original strand, 13243449 - 13243514
Alignment:
Q  480 ataccctaagagtgtgtttg--gatggaggaatgttttgagggaatgtaatgttttgaggaaattc 543  Q
    ||||||||||||||||||||  ||||  |||||||||||||||||||||||||||||||| |||||    
T  13243449 ataccctaagagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 37145569 - 37145499
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||| |||||||||| |||||||||||||||||||||||||| ||||  ||||||| |||||||| |||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtgaa 37145499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 485 - 545
Target Start/End: Original strand, 6634012 - 6634072
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||||||||| || || |||||||| ||||||||||||||||| |||||||    
T  6634012 ctaagagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaa 6634072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 560
Target Start/End: Complemental strand, 9894388 - 9894320
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||| ||||||||||||||||||||||||||   ||| ||||||| |||||||| |||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaa 9894320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 542
Target Start/End: Complemental strand, 15804451 - 15804399
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaatt 542  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 552
Target Start/End: Original strand, 23091963 - 23092026
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||||| | ||||||||||||||    
T  23091963 agagtgtgttttgatgg-ggaatattttgagggaatgtaatgttttgaaggaattcaactacttt 23092026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 32389974 - 32390034
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactact 550  Q
    ||||||||||||||  |||||||||||| |||||||||| |||||||| ||||||||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactact 32390034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 488 - 560
Target Start/End: Original strand, 35379344 - 35379415
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||||||| ||||||| | |||||| |||||    
T  35379344 agagtgtgtttggatgg-ggaatgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaa 35379415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 482 - 523
Target Start/End: Original strand, 2550322 - 2550363
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  2550322 accctaagagtgtgtttggatgggggaatgttttgagggaat 2550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 490 - 539
Target Start/End: Complemental strand, 13243561 - 13243512
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaa 539  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgaggaa 13243512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 523
Target Start/End: Complemental strand, 15270908 - 15270871
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15270908 taagagtgtgtttggatggaggaatgttttgagggaat 15270871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 490 - 554
Target Start/End: Complemental strand, 28828504 - 28828440
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    ||||||||||||||| | ||| |||||||| ||||||||||||||||| ||||||| || |||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttga 28828440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 32471015 - 32470975
Alignment:
Q  514 ttgagggaatgtaatgttttgaggaaattcaactactttga 554  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  32471015 ttgagggaatgtaatgttttgagggaattcaactactttga 32470975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 489 - 545
Target Start/End: Original strand, 37090282 - 37090338
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||| || ||||||||||||| ||||  |||||||||||||||||||    
T  37090282 gagtgtgtttggatagaagaatgttttgaggtaatgcgatgttttgaggaaattcaa 37090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 552
Target Start/End: Complemental strand, 40809500 - 40809436
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||| ||||| | ||||||||||| |||||||||||||||||  |||||| |||||||    
T  40809500 agagtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattcagctacttt 40809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 560
Target Start/End: Original strand, 10314646 - 10314721
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||| ||||||||||||| |||||||||| | |||||||| |||| ||| ||||||| || ||||| |||||    
T  10314646 ctaagagtatgtttggatggagaaatgttttgaagaaatgtaatattttaagggaattcaaatattttgatgtgaa 10314721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 490 - 553
Target Start/End: Complemental strand, 20320716 - 20320653
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    |||||||||||||| | ||||||||||| |||||||||| |||| ||| ||||||| |||||||    
T  20320716 agtgtgtttggatgaatgaatgttttgaaggaatgtaatattttaagggaattcaaatactttg 20320653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 34982348 - 34982313
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||||||||||||||||||||||    
T  34982348 agagtgtgtttggatggaggaatgttttgagggaat 34982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 490 - 560
Target Start/End: Original strand, 14834826 - 14834896
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||| ||||  |||||||| |||||||||||||||||| ||| ||| ||| |||||||| |||||    
T  14834826 agtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaatccaaatactttgaggtgaa 14834896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 523
Target Start/End: Original strand, 22305109 - 22305147
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  22305109 ctaagagtgtgtttggatgggggaatgttttgagggaat 22305147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 2166853 - 2166789
Alignment:
Q  303 aaagtagaacatgaatatttcagcatctaccattctaagagtaacaccacaagattcaacaatca 367  Q
    ||||||||||||| ||||  ||| |||||||| || || |||||||||||||| |||||||||||    
T  2166853 aaagtagaacatggatatcacagaatctaccactccaaaagtaacaccacaaggttcaacaatca 2166789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 33146061 - 33146096
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33146061 agagtgtgtttggatgggggaatgttttgagggaat 33146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 33146191 - 33146226
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  33146191 agagtgtgtttggatgggggaatgttttgagggaat 33146226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 488 - 518
Target Start/End: Original strand, 34105089 - 34105119
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgag 518  Q
    |||||||||||||||||||||||||||||||    
T  34105089 agagtgtgtttggatggaggaatgttttgag 34105119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 560
Target Start/End: Complemental strand, 6634170 - 6634101
Alignment:
Q  491 gtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||| ||||  ||| ||||||||||||| |||| | | | |||||||||||||| |||||    
T  6634170 gtgtgtttggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaa 6634101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 523
Target Start/End: Original strand, 22302533 - 22302574
Alignment:
Q  482 accctaagagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||| ||||||||||||||||| | ||||||||||||||||    
T  22302533 acccttagagtgtgtttggatggggtaatgttttgagggaat 22302574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 523
Target Start/End: Original strand, 40643838 - 40643871
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||    
T  40643838 agtgtgtttggatggagaaatgttttgagggaat 40643871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 490 - 559
Target Start/End: Complemental strand, 562 - 493
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtga 493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 485 - 551
Target Start/End: Original strand, 402 - 468
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    |||||||||||||||||||| ||||| |||||||||||  ||||||||||||| |||||||||||||    
T  402 ctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactactt 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 490 - 559
Target Start/End: Original strand, 2031 - 2100
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtga 2100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 485 - 551
Target Start/End: Complemental strand, 2191 - 2125
Alignment:
Q  485 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    |||||||||||||||||||| ||||| |||||||||||  ||||||||||||| |||||||||||||    
T  2191 ctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactactt 2125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 484 - 560
Target Start/End: Original strand, 4071 - 4147
Alignment:
Q  484 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||| |||||||| |||||    
T  4071 cctaagagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaa 4147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 560
Target Start/End: Original strand, 10887 - 10958
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttgacgtgaa 10958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 490 - 552
Target Start/End: Original strand, 82945 - 83007
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactacttt 83007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 7153 - 7216
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttg 553  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaaatactttg 7216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 4570 - 4514
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaa 4514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 489 - 545
Target Start/End: Complemental strand, 5214 - 5158
Alignment:
Q  489 gagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaa 5158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 490 - 560
Target Start/End: Complemental strand, 19855 - 19786
Alignment:
Q  490 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || |||||||| |||||||| |||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtgaa 19786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 19193 - 19269
Alignment:
Q  483 ccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgacgtgaa 560  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||||||||| ||||||| || ||||| |||||    
T  19193 ccctaaaagtgtgtttggatgggggagtattttgagggaatgtaatgttttgagg-aattcaaatattttgaggtgaa 19269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 492 - 552
Target Start/End: Complemental strand, 56429 - 56369
Alignment:
Q  492 tgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactacttt 552  Q
    ||||||||||||  ||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaactacttt 56369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 56304 - 56345
Alignment:
Q  518 gggaatgtaatgttttgaggaaattcaactactttgacgtga 559  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  56304 gggaatgtaatgttttgagggaattcaactactttgaggtga 56345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 488 - 545
Target Start/End: Original strand, 2867 - 2924
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaa 545  Q
    ||||||||||| ||||| ||||||||| ||| |||||||||||||||||| |||||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaa 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Complemental strand, 17640 - 17605
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17640 agagtgtgtttggatgggggaatgttttgagggaat 17605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 523
Target Start/End: Original strand, 109049 - 109084
Alignment:
Q  488 agagtgtgtttggatggaggaatgttttgagggaat 523  Q
    ||||||||||||||||| ||||||||||||||||||    
T  109049 agagtgtgtttggatgggggaatgttttgagggaat 109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 8322 - 8360
Alignment:
Q  317 atatttcagcatctaccattctaagagtaacaccacaag 355  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  8322 atatctcagcatctaccattccaagagtaacaccacaag 8360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 15938 - 15874
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| | ||||  ||||||| |||||    
T  15938 taagagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattcaaatactt 15874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 2980 - 2916
Alignment:
Q  486 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaggaaattcaactactt 551  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||| | ||||  ||||||| |||||    
T  2980 taagagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattcaaatactt 2916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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