View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6283_low_4 (Length: 307)
Name: NF6283_low_4
Description: NF6283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6283_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 13920333 - 13920043
Alignment:
| Q |
1 |
aacttgctagtgacattccaattgctaccatagttgacaaatttgcttttgatggttgaccagctccaagtgcattccctacccttgttgaaaccgaagc |
100 |
Q |
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| T |
13920333 |
aacttgctagtgacattccaattgctaccatagttgacaaatttgcttttgatggttgaccagctccaagtgcattccctacccttgttgaaaccgaagc |
13920234 |
T |
|
| Q |
101 |
actaagtgccgttggtaaagtgtacataagtgatgttgtttgtatcactattccggctgtggctaaagctacacgagggttataaaggtaaccagctaga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
13920233 |
actaagtgccgttggtaaagtgtacataagtgatgttgtttgtatcactattccggccgtggctaaagctacacgagggttataaaggtaaccagctaga |
13920134 |
T |
|
| Q |
201 |
attgtcatgaattcataccaccaccattctaagcaaactccaagacaactttgaatagaaaaccttattaacatgccccattctttgccta |
291 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13920133 |
attgtcatgaattcataccaccaccattctaaacaaactccaagacaactttgaatagaaaaccttattaacatgccccattctttgccta |
13920043 |
T |
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