View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6283_low_5 (Length: 280)
Name: NF6283_low_5
Description: NF6283
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6283_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 278
Target Start/End: Original strand, 51958116 - 51958374
Alignment:
| Q |
20 |
ataggtttgggggaattgacggaggagtgatcggtgatgatggaatcgggttttttaagatggaagagagatttcaaagagttgtggtgattacggagga |
119 |
Q |
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| T |
51958116 |
ataggtttgggggaattgacggaggagtgatcggtgatgatggaatcgggttttttaagatggaagagagatttcaaagagttgtggtgattacggagga |
51958215 |
T |
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| Q |
120 |
tagtttcccacattcctaacttaacgcctctgtnnnnnnnnnnnnnnnnnnnnnnttcttcctcggtttccatttcttctacaaattgattcagttctat |
219 |
Q |
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|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51958216 |
tagtttcccacattcctaacttaacgcctccgttggtggtgggggtggtggtggtttcttcctcggtttccatttcttctacaaattgattcagttctat |
51958315 |
T |
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| Q |
220 |
tgatttcgttttcatgatcgcaaatcggcgccaactttactttctttcttctcactcga |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
51958316 |
tgatttcgttttcatgatcgcaaatcggcgccaactttactttctttcttctcattcga |
51958374 |
T |
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