View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6284_low_9 (Length: 227)
Name: NF6284_low_9
Description: NF6284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6284_low_9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 30788971 - 30789191
Alignment:
| Q |
7 |
ttattttcttttccattggacttggatgacaagatagagaacagttgtccctagagtataaaaagtagaaagtgtaggatacaaaaactagggaaaaggg |
106 |
Q |
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| T |
30788971 |
ttattttcttttccattggagttggatgacaagatagagaacagttgcccctagagtataaaaagtagaaagtgtaggatacaaaaactagggaaaaggg |
30789070 |
T |
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| Q |
107 |
aggggtgcccatagaagtagaatagtgggggtttggggtgtccaaaaagtcattaatggaacccacttagaaacataaactcaatttttgcatcagagtg |
206 |
Q |
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| T |
30789071 |
aggggtgcccatagaagtaggatagtgggggtttggggtgtataaaaagtcattaatggaacccacttagaaacataaactcaatttttgcatcagagtg |
30789170 |
T |
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| Q |
207 |
aaagtgttgaaatttttgaaa |
227 |
Q |
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| T |
30789171 |
aaagtgttgaaatttttgaaa |
30789191 |
T |
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