View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6285_low_7 (Length: 245)
Name: NF6285_low_7
Description: NF6285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6285_low_7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 14848666 - 14848437
Alignment:
| Q |
16 |
ataatgacaaaactcttcctcaaaagtcttaacgttgatgcatttttatggttggattcgaactgaggtgaagcctcaagctatgattgattattagata |
115 |
Q |
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| T |
14848666 |
ataaagacaaaactctttctcaaaagtcttaacgttgatgcatttttatggttggattcgaacttaggtgaagcctgaagttatgattgattattagata |
14848567 |
T |
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| Q |
116 |
gtaaaagagaaattgataaaataattttattagtagaatcatactaatccactaatgatcaatgctaattgattggccattatttatttagtgatgaatg |
215 |
Q |
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| T |
14848566 |
gtaaaagagaaattgataaaataattttattagtagaatcatactaatccactaatgatcaatgctaattgattggccattatttatttagtgatgaatg |
14848467 |
T |
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| Q |
216 |
aatgtctaagaatatcaatattttaactat |
245 |
Q |
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| T |
14848466 |
aatgtctaagaatataaatattttaactat |
14848437 |
T |
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