View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6287_low_22 (Length: 205)
Name: NF6287_low_22
Description: NF6287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6287_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 46109875 - 46109707
Alignment:
| Q |
18 |
aagaacagagtgtttctattattataatttaatgatttactggcatctacagaaaaatcaggaattaagtaatcagcgnnnnnnnccaatgtaaatcata |
117 |
Q |
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| T |
46109875 |
aagaacagagtgtttctattattataatttaatgatttactggcatctacagaaaaatcaggaactaagtaatcagcaaaaaaaaccaatgtaaatcata |
46109776 |
T |
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| Q |
118 |
ttgtattacgccagaaactgcaattgccttgggtgtgtattagtttactgtaacactgtgggactcctc |
186 |
Q |
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| T |
46109775 |
ttgtattacgccagaaactgcaattgccttgggtttgtattagtttactgtaacactgtcggactcctc |
46109707 |
T |
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