View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6287_low_4 (Length: 511)

Name: NF6287_low_4
Description: NF6287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6287_low_4
NF6287_low_4
[»] chr7 (46 HSPs)
chr7 (28-442)||(13006682-13007106)
chr7 (90-442)||(12591025-12591388)
chr7 (28-442)||(13123298-13123721)
chr7 (28-442)||(12710227-12710650)
chr7 (52-442)||(13742984-13743382)
chr7 (117-404)||(3857784-3858082)
chr7 (239-442)||(11389730-11389933)
chr7 (250-442)||(2966447-2966640)
chr7 (250-442)||(11383253-11383445)
chr7 (250-442)||(29181490-29181683)
chr7 (270-442)||(2464865-2465038)
chr7 (299-442)||(21231342-21231485)
chr7 (250-442)||(20906841-20907022)
chr7 (100-262)||(16676706-16676867)
chr7 (100-262)||(17650942-17651103)
chr7 (249-369)||(16676793-16676913)
chr7 (249-369)||(17651029-17651149)
chr7 (285-415)||(46625476-46625605)
chr7 (90-193)||(16090457-16090559)
chr7 (89-262)||(2464735-2464918)
chr7 (285-415)||(13664447-13664577)
chr7 (90-182)||(29181701-29181792)
chr7 (100-262)||(11389849-11390010)
chr7 (249-430)||(20311444-20311627)
chr7 (252-298)||(16090568-16090614)
chr7 (116-228)||(21231532-21231643)
chr7 (116-195)||(20311631-20311709)
chr7 (90-160)||(14320245-14320315)
chr7 (100-160)||(13678845-13678905)
chr7 (135-182)||(2966383-2966429)
chr7 (135-182)||(20907040-20907086)
chr7 (443-477)||(13007812-13007846)
chr7 (443-477)||(13744085-13744119)
chr7 (476-511)||(9509390-9509425)
chr7 (477-511)||(10589239-10589273)
chr7 (100-146)||(11383476-11383522)
chr7 (443-477)||(12709489-12709523)
chr7 (443-477)||(16677684-16677718)
chr7 (443-477)||(17651920-17651954)
chr7 (477-507)||(38227685-38227715)
chr7 (381-425)||(16676905-16676950)
chr7 (381-425)||(17651141-17651186)
chr7 (115-160)||(46625357-46625402)
chr7 (287-323)||(13572361-13572397)
chr7 (337-369)||(13679081-13679113)
chr7 (174-202)||(14320192-14320220)
[»] chr6 (32 HSPs)
chr6 (28-442)||(12167613-12168037)
chr6 (28-442)||(19286522-19286946)
chr6 (28-442)||(19877706-19878130)
chr6 (28-442)||(19786250-19786674)
chr6 (28-442)||(19883482-19883906)
chr6 (90-442)||(25470084-25470448)
chr6 (96-430)||(34640381-34640727)
chr6 (96-430)||(34647055-34647401)
chr6 (52-442)||(29614530-29614927)
chr6 (117-442)||(21364859-21365195)
chr6 (117-442)||(23968841-23969177)
chr6 (250-442)||(20008329-20008522)
chr6 (239-415)||(18799909-18800085)
chr6 (239-389)||(21565627-21565776)
chr6 (285-415)||(24513253-24513383)
chr6 (100-262)||(21565692-21565853)
chr6 (100-201)||(18799832-18799932)
chr6 (300-415)||(9187025-9187140)
chr6 (96-193)||(20008529-20008625)
chr6 (285-415)||(19471745-19471874)
chr6 (285-415)||(25396689-25396818)
chr6 (137-262)||(24513345-24513469)
chr6 (300-369)||(19300203-19300272)
chr6 (300-404)||(31251953-31252057)
chr6 (475-511)||(20638167-20638203)
chr6 (443-477)||(29613784-29613818)
chr6 (75-155)||(9099690-9099769)
chr6 (445-477)||(19287654-19287686)
chr6 (75-155)||(29097222-29097301)
chr6 (443-477)||(18800823-18800857)
chr6 (381-442)||(19300149-19300211)
chr6 (90-203)||(19300308-19300420)
[»] chr5 (34 HSPs)
chr5 (28-442)||(23527880-23528304)
chr5 (117-402)||(28889757-28890053)
chr5 (117-402)||(28896461-28896757)
chr5 (117-402)||(28909709-28910005)
chr5 (117-402)||(28931401-28931697)
chr5 (117-402)||(28946104-28946400)
chr5 (199-402)||(28925287-28925491)
chr5 (187-331)||(20819639-20819783)
chr5 (187-331)||(20826739-20826883)
chr5 (250-442)||(22460637-22460830)
chr5 (250-442)||(22467261-22467454)
chr5 (250-442)||(19236381-19236574)
chr5 (178-323)||(28932980-28933128)
chr5 (285-442)||(18408322-18408481)
chr5 (117-182)||(19236299-19236363)
chr5 (253-415)||(22439157-22439319)
chr5 (96-182)||(22460534-22460619)
chr5 (119-182)||(22467181-22467243)
chr5 (90-155)||(34829455-34829520)
chr5 (75-155)||(20781103-20781182)
chr5 (100-195)||(18408521-18408615)
chr5 (90-155)||(20772342-20772407)
chr5 (445-478)||(23529023-23529056)
chr5 (75-155)||(24930547-24930626)
chr5 (476-511)||(25421733-25421768)
chr5 (476-511)||(25431595-25431630)
chr5 (481-511)||(9078153-9078183)
chr5 (477-507)||(13025515-13025545)
chr5 (477-507)||(13095699-13095729)
chr5 (443-477)||(22438401-22438435)
chr5 (477-511)||(23390382-23390416)
chr5 (477-511)||(24493769-24493803)
chr5 (287-324)||(27009526-27009563)
chr5 (117-182)||(28933135-28933200)
[»] chr3 (34 HSPs)
chr3 (28-442)||(41455479-41455906)
chr3 (187-442)||(10389828-10390083)
chr3 (187-442)||(10414917-10415172)
chr3 (187-442)||(10421587-10421842)
chr3 (100-442)||(24192274-24192627)
chr3 (309-442)||(24934210-24934343)
chr3 (250-442)||(17131211-17131405)
chr3 (239-442)||(16801848-16802052)
chr3 (250-434)||(12033834-12034019)
chr3 (239-389)||(55499561-55499711)
chr3 (250-405)||(14865326-14865481)
chr3 (285-442)||(17240893-17241051)
chr3 (100-262)||(55499627-55499788)
chr3 (90-193)||(14865216-14865319)
chr3 (100-201)||(16802029-16802129)
chr3 (361-425)||(55499504-55499569)
chr3 (135-262)||(12033946-12034072)
chr3 (135-193)||(17131147-17131204)
chr3 (475-511)||(13442475-13442511)
chr3 (352-442)||(13324169-13324260)
chr3 (476-511)||(17488057-17488092)
chr3 (443-478)||(41454737-41454772)
chr3 (477-511)||(20698322-20698356)
chr3 (75-155)||(19235687-19235766)
chr3 (352-442)||(13313277-13313368)
chr3 (176-231)||(17241094-17241149)
chr3 (476-507)||(17499543-17499574)
chr3 (68-146)||(13324416-13324493)
chr3 (477-507)||(14572793-14572823)
chr3 (477-511)||(14576719-14576753)
chr3 (443-477)||(16798337-16798371)
chr3 (481-511)||(40213611-40213641)
chr3 (481-509)||(14973057-14973085)
chr3 (118-150)||(55499557-55499589)
[»] chr4 (20 HSPs)
chr4 (28-442)||(8046214-8046639)
chr4 (96-442)||(53483019-53483377)
chr4 (116-442)||(15407485-15407811)
chr4 (250-442)||(16147212-16147405)
chr4 (249-442)||(11847584-11847779)
chr4 (90-193)||(16147412-16147514)
chr4 (285-415)||(13888158-13888287)
chr4 (285-415)||(13887301-13887430)
chr4 (339-442)||(14486229-14486333)
chr4 (100-203)||(14486052-14486154)
chr4 (348-415)||(15244793-15244860)
chr4 (285-415)||(15307636-15307765)
chr4 (90-152)||(11847476-11847538)
chr4 (476-511)||(44053030-44053065)
chr4 (361-415)||(8834486-8834540)
chr4 (477-510)||(16239856-16239889)
chr4 (477-511)||(7893901-7893935)
chr4 (443-477)||(8045485-8045519)
chr4 (481-511)||(16377413-16377443)
chr4 (348-393)||(8834453-8834498)
[»] chr8 (17 HSPs)
chr8 (28-442)||(23865862-23866286)
chr8 (137-442)||(17053949-17054265)
chr8 (116-442)||(14056945-14057271)
chr8 (250-442)||(24321052-24321245)
chr8 (285-442)||(25111492-25111650)
chr8 (285-442)||(18613788-18613947)
chr8 (96-193)||(24321252-24321348)
chr8 (33-130)||(17053869-17053962)
chr8 (116-231)||(25111385-25111499)
chr8 (347-415)||(21839979-21840047)
chr8 (347-415)||(21931275-21931343)
chr8 (477-511)||(21923814-21923848)
chr8 (116-160)||(18613619-18613663)
chr8 (481-511)||(6759457-6759487)
chr8 (477-511)||(18818295-18818329)
chr8 (477-511)||(20536409-20536443)
chr8 (477-511)||(23648754-23648788)
[»] chr2 (30 HSPs)
chr2 (96-442)||(5706405-5706762)
chr2 (52-369)||(26583121-26583448)
chr2 (250-442)||(10057-10250)
chr2 (239-425)||(23101860-23102047)
chr2 (250-369)||(25181356-25181475)
chr2 (239-389)||(23089470-23089619)
chr2 (100-422)||(23878331-23878663)
chr2 (100-262)||(23089535-23089696)
chr2 (100-262)||(23101963-23102124)
chr2 (90-193)||(29281368-29281470)
chr2 (137-404)||(23264511-23264777)
chr2 (285-442)||(23063200-23063359)
chr2 (120-193)||(9978-10050)
chr2 (96-193)||(25181482-25181578)
chr2 (100-231)||(21907760-21907890)
chr2 (254-307)||(29281481-29281534)
chr2 (90-202)||(27208282-27208394)
chr2 (90-202)||(27210617-27210729)
chr2 (100-160)||(23063066-23063126)
chr2 (285-415)||(24661093-24661222)
chr2 (90-154)||(26884578-26884642)
chr2 (443-477)||(20317206-20317240)
chr2 (476-507)||(27753780-27753811)
chr2 (477-507)||(22337320-22337350)
chr2 (477-511)||(22731120-22731154)
chr2 (477-511)||(22738066-22738100)
chr2 (443-477)||(23101093-23101127)
chr2 (477-511)||(23286062-23286096)
chr2 (381-425)||(26583440-26583485)
chr2 (287-324)||(32465547-32465584)
[»] scaffold1773 (1 HSPs)
scaffold1773 (28-442)||(429-853)
[»] scaffold0117 (4 HSPs)
scaffold0117 (28-442)||(8957-9382)
scaffold0117 (392-442)||(2280-2330)
scaffold0117 (443-477)||(1541-1575)
scaffold0117 (443-477)||(8218-8252)
[»] scaffold0924 (4 HSPs)
scaffold0924 (178-442)||(1134-1399)
scaffold0924 (443-477)||(406-440)
scaffold0924 (141-182)||(1406-1446)
scaffold0924 (174-202)||(1252-1280)
[»] scaffold0006 (2 HSPs)
scaffold0006 (184-442)||(49595-49854)
scaffold0006 (443-478)||(50558-50593)
[»] scaffold0029 (8 HSPs)
scaffold0029 (178-442)||(111322-111575)
scaffold0029 (270-442)||(91583-91756)
scaffold0029 (270-442)||(97309-97482)
scaffold0029 (95-263)||(91702-91880)
scaffold0029 (95-263)||(97428-97606)
scaffold0029 (28-130)||(111183-111284)
scaffold0029 (443-477)||(117160-117194)
scaffold0029 (443-477)||(112262-112296)
[»] scaffold0026 (2 HSPs)
scaffold0026 (176-442)||(12233-12498)
scaffold0026 (52-130)||(12534-12612)
[»] scaffold0025 (1 HSPs)
scaffold0025 (100-442)||(14779-15121)
[»] scaffold0456 (4 HSPs)
scaffold0456 (185-442)||(452-709)
scaffold0456 (185-442)||(7597-7854)
scaffold0456 (52-130)||(330-407)
scaffold0456 (52-130)||(7475-7552)
[»] scaffold0247 (1 HSPs)
scaffold0247 (100-369)||(10693-10962)
[»] chr1 (20 HSPs)
chr1 (28-235)||(41111190-41111407)
chr1 (250-442)||(20851514-20851707)
chr1 (250-442)||(20858141-20858334)
chr1 (100-442)||(18712131-18712473)
chr1 (250-442)||(21705756-21705949)
chr1 (250-442)||(21710299-21710492)
chr1 (89-193)||(21710189-21710292)
chr1 (96-193)||(20858341-20858437)
chr1 (96-193)||(21705653-21705749)
chr1 (96-182)||(20851725-20851810)
chr1 (285-415)||(22030157-22030286)
chr1 (300-369)||(19961720-19961789)
chr1 (476-511)||(22356059-22356094)
chr1 (476-511)||(22357745-22357780)
chr1 (381-442)||(19961781-19961843)
chr1 (477-511)||(22354458-22354492)
chr1 (481-511)||(50210103-50210133)
chr1 (90-155)||(19961561-19961626)
chr1 (249-325)||(11157591-11157667)
chr1 (481-509)||(34509983-34510011)
[»] scaffold0235 (3 HSPs)
scaffold0235 (100-442)||(22975-23318)
scaffold0235 (100-351)||(15350-15601)
scaffold0235 (477-511)||(11399-11433)
[»] scaffold0107 (1 HSPs)
scaffold0107 (102-442)||(40910-41250)
[»] scaffold0085 (2 HSPs)
scaffold0085 (250-442)||(4054-4246)
scaffold0085 (96-193)||(4253-4349)
[»] scaffold0077 (3 HSPs)
scaffold0077 (249-425)||(4019-4196)
scaffold0077 (102-262)||(4122-4281)
scaffold0077 (443-477)||(3256-3290)
[»] scaffold0124 (1 HSPs)
scaffold0124 (100-442)||(34658-35000)
[»] scaffold0053 (3 HSPs)
scaffold0053 (250-442)||(79872-80065)
scaffold0053 (90-193)||(80072-80174)
scaffold0053 (239-415)||(81624-81799)
[»] scaffold0461 (2 HSPs)
scaffold0461 (100-442)||(389-720)
scaffold0461 (100-151)||(7605-7656)
[»] scaffold0023 (2 HSPs)
scaffold0023 (249-442)||(134930-135113)
scaffold0023 (135-193)||(134867-134924)
[»] scaffold0634 (2 HSPs)
scaffold0634 (52-202)||(3007-3156)
scaffold0634 (298-442)||(3191-3335)
[»] scaffold0261 (2 HSPs)
scaffold0261 (298-442)||(23952-24096)
scaffold0261 (90-155)||(24188-24253)
[»] scaffold0020 (2 HSPs)
scaffold0020 (249-442)||(102310-102504)
scaffold0020 (116-262)||(102430-102575)
[»] scaffold0139 (2 HSPs)
scaffold0139 (337-442)||(15379-15486)
scaffold0139 (100-231)||(15531-15661)
[»] scaffold0310 (2 HSPs)
scaffold0310 (249-430)||(17407-17590)
scaffold0310 (116-198)||(6907-6988)
[»] scaffold0222 (2 HSPs)
scaffold0222 (285-442)||(16338-16494)
scaffold0222 (100-195)||(16153-16247)
[»] scaffold0004 (3 HSPs)
scaffold0004 (90-331)||(116238-116478)
scaffold0004 (337-415)||(129068-129146)
scaffold0004 (116-204)||(129206-129293)
[»] scaffold0138 (1 HSPs)
scaffold0138 (285-427)||(1334-1476)
[»] scaffold0094 (2 HSPs)
scaffold0094 (347-415)||(51822-51890)
scaffold0094 (116-155)||(51643-51682)
[»] scaffold0031 (2 HSPs)
scaffold0031 (347-415)||(121479-121547)
scaffold0031 (347-415)||(132356-132424)
[»] scaffold0154 (3 HSPs)
scaffold0154 (75-202)||(30258-30383)
scaffold0154 (381-442)||(30466-30528)
scaffold0154 (443-477)||(31243-31277)
[»] scaffold0483 (2 HSPs)
scaffold0483 (306-442)||(11390-11527)
scaffold0483 (90-155)||(11627-11692)
[»] scaffold0476 (2 HSPs)
scaffold0476 (100-161)||(3904-3965)
scaffold0476 (443-477)||(2760-2794)
[»] scaffold0028 (3 HSPs)
scaffold0028 (347-415)||(1645-1713)
scaffold0028 (100-160)||(65487-65547)
scaffold0028 (337-369)||(65662-65694)
[»] scaffold0001 (2 HSPs)
scaffold0001 (90-154)||(493647-493711)
scaffold0001 (338-415)||(525332-525409)
[»] scaffold0453 (1 HSPs)
scaffold0453 (90-193)||(11132-11235)
[»] scaffold0090 (2 HSPs)
scaffold0090 (88-195)||(17537-17643)
scaffold0090 (351-430)||(17750-17829)
[»] scaffold1469 (1 HSPs)
scaffold1469 (287-442)||(875-1030)
[»] scaffold0335 (1 HSPs)
scaffold0335 (338-415)||(3037-3114)
[»] scaffold0317 (2 HSPs)
scaffold0317 (100-160)||(738-798)
scaffold0317 (337-369)||(974-1006)
[»] scaffold0206 (1 HSPs)
scaffold0206 (90-154)||(18060-18124)
[»] scaffold2054 (1 HSPs)
scaffold2054 (443-477)||(1094-1128)
[»] scaffold0145 (1 HSPs)
scaffold0145 (477-511)||(38961-38995)
[»] scaffold0011 (2 HSPs)
scaffold0011 (477-511)||(52114-52148)
scaffold0011 (443-478)||(201-236)
[»] scaffold0720 (1 HSPs)
scaffold0720 (90-155)||(3878-3943)
[»] scaffold0131 (1 HSPs)
scaffold0131 (300-405)||(532-637)
[»] scaffold0305 (1 HSPs)
scaffold0305 (476-511)||(20604-20639)
[»] scaffold0232 (1 HSPs)
scaffold0232 (381-427)||(18827-18874)
[»] scaffold0193 (1 HSPs)
scaffold0193 (476-507)||(13416-13447)
[»] scaffold0169 (1 HSPs)
scaffold0169 (338-405)||(6537-6604)
[»] scaffold0034 (1 HSPs)
scaffold0034 (68-155)||(72633-72719)
[»] scaffold0021 (1 HSPs)
scaffold0021 (476-511)||(124786-124821)
[»] scaffold1890 (1 HSPs)
scaffold1890 (443-477)||(116-150)
[»] scaffold0647 (1 HSPs)
scaffold0647 (476-506)||(6006-6036)
[»] scaffold0639 (1 HSPs)
scaffold0639 (477-511)||(8676-8710)
[»] scaffold0352 (1 HSPs)
scaffold0352 (477-511)||(17873-17907)
[»] scaffold0228 (3 HSPs)
scaffold0228 (481-511)||(4708-4738)
scaffold0228 (481-511)||(12290-12320)
scaffold0228 (481-511)||(22242-22272)
[»] scaffold0091 (1 HSPs)
scaffold0091 (443-477)||(1926-1960)
[»] scaffold0080 (1 HSPs)
scaffold0080 (481-511)||(40113-40143)
[»] scaffold0016 (1 HSPs)
scaffold0016 (477-511)||(2052-2086)
[»] scaffold1461 (1 HSPs)
scaffold1461 (351-408)||(1706-1763)
[»] scaffold0088 (1 HSPs)
scaffold0088 (445-474)||(22526-22555)
[»] scaffold0359 (1 HSPs)
scaffold0359 (282-322)||(1002-1042)
[»] scaffold0292 (1 HSPs)
scaffold0292 (477-509)||(3673-3705)
[»] scaffold0122 (1 HSPs)
scaffold0122 (481-509)||(25955-25983)
[»] scaffold0058 (1 HSPs)
scaffold0058 (443-479)||(673-709)


Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 13006682 - 13007106
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  13006682 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 13006780  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  13006781 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 13006880  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13006881 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 13006980  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13006981 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagtgcaaaac 13007080  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  13007081 ctacggtttcagacctcttctcactc 13007106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 90 - 442
Target Start/End: Complemental strand, 12591388 - 12591025
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct------- 182  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||           
T  12591388 ttcagaaaaacgctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggatctgggatcagttcgcttacgggt 12591289  T
Q  183 ----cacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaa 278  Q
        ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12591288 cgctcacggttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaaccaa 12591189  T
Q  279 acttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatg 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  12591188 acttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggaagcttgcttgaatgctcgcttaagcgacggatg 12591089  T
Q  379 cttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12591088 cttcgcttaagcgaccattcatctgggcagtgcaaaacctacggtttcagactacttctcactc 12591025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 28 - 442
Target Start/End: Complemental strand, 13123721 - 13123298
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | ||||||||| |||||||||||  |||||||||||||||    
T  13123721 tatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaaa-ggctgactaagactcacttcgcttaagc 13123623  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||| |    
T  13123622 gacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatca 13123524  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13123523 aaatggtttttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 13123424  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||| ||||||||||||||||| |  |||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  13123423 aagcgaacgggtagaatcgcattctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaac 13123324  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  13123323 ctacggtttcagacctcttctcactc 13123298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 28 - 442
Target Start/End: Complemental strand, 12710650 - 12710227
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | ||||||||| |||||||||||  |||||||||||||||    
T  12710650 tatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaaa-ggctgactaagactcacttcgcttaagc 12710552  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||| |    
T  12710551 gacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacaggtcgctcacggttcgcttgagcgaactttggacagaatca 12710453  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12710452 aaatggtttttggctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 12710353  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||| ||||||||||||||||| |  |||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  12710352 aagcgaacgggtagaatcgcattctgggcagttaccttgaatgctcgcttaagcgatggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaac 12710253  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  12710252 ctacggtttcagacctcttctcactc 12710227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 52 - 442
Target Start/End: Original strand, 13742984 - 13743382
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgacc 151  Q
    |||| |||||||||| |||||||||||| || ||| | |||||||   |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  13742984 agaatgctcaagaagtcccctcatgcacgaaacaaaagttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgacc 13743080  T
Q  152 agcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatgaaaa-tggtttttcgctcacaaggt 239  Q
     ||||| ||||||| |||||||||| |||||           |||||||||||||||||||||||||||||||| |||| | |||||||||||||  |||    
T  13743081 ggcttatagtaggt-ctgggttcagctcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatcaaaaattgtttttcgctcacggggt 13743179  T
Q  240 cgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcatt 339  Q
    |||||| |||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  13743180 cgcttatcattcgcttaagtgaattcttggcagaatcgaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtagaatcgcatt 13743279  T
Q  340 ctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctca 439  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  13743280 ctgggcagtttccttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcagacctcttctca 13743379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 117 - 404
Target Start/End: Complemental strand, 3858082 - 3857784
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||           |||||||||||||||||||||||    
T  3858082 ttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaacttt 3857984  T
Q  206 ggacagaatgaaaa-tggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgct 304  Q
    | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3857983 gaacagaatcaaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgct 3857884  T
Q  305 cacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctg 403  Q
    ||| ||||||||| |||||||||||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  ||||||||||||||| |||||||    
T  3857883 cactgttcgcttaggcgaacgggtaaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatctg 3857785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 239 - 442
Target Start/End: Complemental strand, 11389933 - 11389730
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  ||||||| |||||||||||||||||| |||| | ||||||||||||| || |||||||  ||||||||||||||||||| ||||||||||    
T  11389933 tcgcttacggttcgcttgagcgaattcttggcagaatcaaattaaattttcgcttacaagctcgctcattgttcgcttaagcgaacgggcaaaatcgcat 11389834  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctc 438  Q
    | ||| ||||||||||||||||||||||||| ||||| |  ||||||||| |||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  11389833 tatggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaaccgaccattcatctgggcagtgcaaaacctacgggttcagacctcttctc 11389734  T
Q  439 actc 442  Q
    ||||    
T  11389733 actc 11389730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 2966447 - 2966640
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  2966447 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 2966546  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  2966547 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 2966640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 11383445 - 11383253
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    |||||| |||||||||||||||||| |||| | ||||||||||||| || |||||||  ||||||||||||||| ||| |||||| |||||| |||||||    
T  11383445 tcgcttgagcgaattcttggcagaatcaaattaaattttcgcttacaagatcgctcattgttcgcttaagcgaaagggcaaaatcacattctaggcagct 11383346  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||    
T  11383345 tgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaacctacgggttcagacctcttctcactc 11383253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 29181683 - 29181490
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagc 348  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| ||| |||||    
T  29181683 tcgcttaagcgaactcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgagcagc 29181584  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     | | |||||| ||||||||  ||||| ||||||||||||||||||| ||||||||| || | ||||  ||||  |||||||||||| |||||||    
T  29181583 -tacatgaatgttcgcttaaacgacgggtgcttcgcttaagcgaccactcatctgggcagggtaaaagttacgattttcagacttctcctcactc 29181490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 270 - 442
Target Start/End: Original strand, 2464865 - 2465038
Alignment:
Q  270 cagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 369  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||| || |  | |||||| |||||||||    
T  2464865 cagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaag 2464964  T
Q  370 tgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     ||||||||||||||||||||||||| || |||||| || | |||| |||||  |||||||||||| |||||||    
T  2464965 cgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgattttcagacttctcctcactc 2465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 299 - 442
Target Start/End: Complemental strand, 21231485 - 21231342
Alignment:
Q  299 ttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattc 398  Q
    ||||||||| |||||||||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  21231485 ttcgctcactgttcgcttaagcgaactgacaaaatcgcattttgggcagcttgcttgaatgctcgcttaagtgacgggtcgttcgcttaagcgaccattc 21231386  T
Q  399 atctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||| ||||| ||||||||||| |||| || |||||||||||    
T  21231385 atctgggcagtgcaaaaacctacgggttca-acctcttctcactc 21231342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 20907022 - 20906841
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||           ||||||||||||||||||| |||||||||||| |    
T  20907022 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgct-----------taagcgaacgggtaaaatcacattctgggcag-t 20906935  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
    | | |||||| ||||||||| ||||| ||||||||||||||||||| |||||| || || | ||||  ||||  |||||||||||| |||||||    
T  20906934 tacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatcttggcagggtaaaagttacgattttcagacttctcctcactc 20906841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 16676706 - 16676867
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| |||| |||||||||| | ||||||||| | ||||| | ||||||||||||||    
T  16676706 ggctgactaaggtcaacttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaag-tctgggttccgctcgcttatggttcgcttgagcg 16676804  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    || | | |||||||| |||||||||||||||| ||| | ||||||||  ||||||| ||||||    
T  16676805 aattcttgacagaatcaaaatggtttttcgcttacaggttcgcttacggttcgcttgagcgaa 16676867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 100 - 262
Target Start/End: Original strand, 17650942 - 17651103
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| |||| |||||||||| | ||||||||| | ||||| | ||||||||||||||    
T  17650942 ggctgactaaggtcaacttcgcttaagcgacgactagttcgcttaagcgaccggcttacagtaag-tctgggttccgctcgcttatggttcgcttgagcg 17651040  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    || | | |||||||| |||||||||||||||| ||| | ||||||||  ||||||| ||||||    
T  17651041 aattcttgacagaatcaaaatggtttttcgcttacaggttcgcttacggttcgcttgagcgaa 17651103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 249 - 369
Target Start/End: Original strand, 16676793 - 16676913
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    ||||||| |||||||||||| ||||| |||| |   |||||||||||  ||||||| ||||||||||| |||||| ||| ||| |||||||||||| |||    
T  16676793 ttcgcttgagcgaattcttgacagaatcaaaatggtttttcgcttacaggttcgcttacggttcgcttgagcgaaagggcaaagtcgcattctgggtagc 16676892  T
Q  349 ttgcttgaatgctcgcttaag 369  Q
    |||||||||||||||||||||    
T  16676893 ttgcttgaatgctcgcttaag 16676913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 249 - 369
Target Start/End: Original strand, 17651029 - 17651149
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    ||||||| |||||||||||| ||||| |||| |   |||||||||||  ||||||| ||||||||||| |||||| ||| ||| |||||||||||| |||    
T  17651029 ttcgcttgagcgaattcttgacagaatcaaaatggtttttcgcttacaggttcgcttacggttcgcttgagcgaaagggcaaagtcgcattctgggtagc 17651128  T
Q  349 ttgcttgaatgctcgcttaag 369  Q
    |||||||||||||||||||||    
T  17651129 ttgcttgaatgctcgcttaag 17651149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 46625476 - 46625605
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||  ||||||||||||||||||||||||||| |  | | || | ||||||||  ||||||||||||||||||||||| ||||| |  ||||    
T  46625476 ttttcgcttacgggttcgctcacggttcgcttaagcgaactg--acattcagaattctgggttgcttgcttgaatgctcgcttaagcgacgggtagttcg 46625573  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||||||||||||||||||||| |||||||||    
T  46625574 cttaagcgaccattcatctgggcagtgcaaaa 46625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 16090457 - 16090559
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||| |||| |    
T  16090457 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtagg-tctgggttcagttcgcttacgggt 16090555  T
Q  190 cgct 193  Q
    ||||    
T  16090556 cgct 16090559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 262
Target Start/End: Original strand, 2464735 - 2464918
Alignment:
Q  89 attcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagt----------- 177  Q
    |||||||||||| || |||||   ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||               
T  2464735 attcagaaaaagactaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtagg-tctgggttcagttcgcttacggg 2464833  T
Q  178 tcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    |||||||||||||||||| |||||||||||||||||| ||| |   |||||||| || || ||||| ||  ||||||||||||||    
T  2464834 tcgctcacggttcgcttgggcgaactttggacagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaa 2464918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 13664447 - 13664577
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  ||||||||||||||||||| ||||||| |  |||   | |||||||| ||||| |||||||||||||||||| ||||| |  |||||    
T  13664447 ttttcgcttacgggttcgctcacggttcgcttgagcgaactgacaaatcagaattctgggtagcttacttgaatgctcgcttaagcgacgggtcgttcgc 13664546  T
Q  385 ttaagcgaccattcatctgggtagtgcaaaa 415  Q
    || ||||| ||||||||| || |||||||||    
T  13664547 ttgagcgatcattcatctaggcagtgcaaaa 13664577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 29181792 - 29181701
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    ||||||||||| ||||||||   ||| || ||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||    
T  29181792 ttcagaaaaagactgactaacactcagtttgcttaagcgacggctagctcgcttaagcgaccatcttacagtagg-tctgggttcagttcgct 29181701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 11390010 - 11389849
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   ||||||||||||||||||||| ||||||||| ||||  || |||||| | ||||||||| | ||||| ||||||||||||||||    
T  11390010 ggctgactaaggtcatcttcgcttaagcgacggctagctcgcttaagcgaccgactcacagtaag-tctgggttccgctcgcttacggttcgcttgagcg 11389912  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    || | | | |||||| ||| |   |||||||| ||||| ||||| |   ||||||||||||||    
T  11389911 aattcttggcagaatcaaattaaattttcgcttacaagctcgctcattgttcgcttaagcgaa 11389849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 249 - 430
Target Start/End: Complemental strand, 20311627 - 20311444
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    |||||||||||||||||||||||||| ||||   |||||| |||||| |  |||||| | |||||||| ||||||||| ||||  ||  |||||||  ||    
T  20311627 ttcgcttaagcgaattcttggcagaatcaaatcgaatttttgcttacaatctcgctctctgttcgcttgagcgaacggctaaagacgatttctgggttgc 20311528  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctac-ggtttcagac 430  Q
    |  | |||||| ||||||||| ||||| |  ||||| || ||||| |||||||||||  |||| ||||||||| ||||||||||    
T  20311527 taacatgaatgttcgcttaagcgacgggtcgttcgcataggcgactattcatctgggctgtgcaaaaacctacgggtttcagac 20311444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 16090568 - 16090614
Alignment:
Q  252 gcttaagcgaattcttggcagaaccaaacttaattttcgcttaccag 298  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  16090568 gcttaagcgaattcttggcagaatcaaacttaattttcgcttaccag 16090614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 21231643 - 21231532
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatg 215  Q
    |||||||||||||||| | |||| ||||||| |||||||| |||| | |||  |||||| | ||||| |||||||||||||||||||||  |  ||||||    
T  21231643 cttcgcttaagcgacgaccagtttgcttaagcgaccagctcacagaaagttg-gggttccgctcgctgacggttcgcttgagcgaacttctggtagaatg 21231545  T
Q  216 aaaatggtttttc 228  Q
    |||||| ||||||    
T  21231544 aaaatgatttttc 21231532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 195
Target Start/End: Complemental strand, 20311709 - 20311631
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttg 195  Q
    ||||||||||||||||||||| ||||||||| |||| |||| ||||| | ||||||||| | ||||| ||||||||||||    
T  20311709 cttcgcttaagcgacggctagctcgcttaagcgaccggcttgcagtaag-tctgggttctgctcgcttacggttcgcttg 20311631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 14320315 - 14320245
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    |||||||||||||||||||||| ||| ||||||||||||| || ||| ||||||||| |||| ||| ||||    
T  14320315 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccggctcacag 14320245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 13678845 - 13678905
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    |||||||||||||   ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  13678845 ggctgactaaggtcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacag 13678905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 2966383 - 2966429
Alignment:
Q  135 agttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2966383 agttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgct 2966429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 20907086 - 20907040
Alignment:
Q  135 agttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  20907086 agttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgct 20907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 13007812 - 13007846
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  13007812 tcaaaataaaataaaataataactagggcgttaca 13007846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 13744085 - 13744119
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  13744085 tcaaaataaaataaaataataactagggcgttaca 13744119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 9509425 - 9509390
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||| |||||||||||||||||||    
T  9509425 cattaagacttaatgaggatgttaattataatctgt 9509390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 10589273 - 10589239
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||| ||||||||||||||||    
T  10589273 attaagacttaatgatgaggttaattataatctgt 10589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 11383522 - 11383476
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaag 146  Q
    |||||||||||||   ||||||||||||||||||||| |||||||||    
T  11383522 ggctgactaaggtcatcttcgcttaagcgacggctagctcgcttaag 11383476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 12709523 - 12709489
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||| ||||||||||||||    
T  12709523 tcaaaataaaataaaataatgactagggcgttaca 12709489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 16677684 - 16677718
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  16677684 tcaaaataaaataaaataacaactagggcgttaca 16677718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 17651920 - 17651954
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  17651920 tcaaaataaaataaaataacaactagggcgttaca 17651954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Complemental strand, 38227715 - 38227685
Alignment:
Q  477 attaagacttaatgatgatgttaattataat 507  Q
    |||||||||||||||||||||||||||||||    
T  38227715 attaagacttaatgatgatgttaattataat 38227685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 16676905 - 16676950
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgca-aaacctacggttt 425  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||    
T  16676905 tcgcttaagcgaccaatcatctgggcagtgcagaaacctacggttt 16676950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 17651141 - 17651186
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgca-aaacctacggttt 425  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||    
T  17651141 tcgcttaagcgaccaatcatctgggcagtgcagaaacctacggttt 17651186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 160
Target Start/End: Original strand, 46625357 - 46625402
Alignment:
Q  115 acttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    |||||||||||||||||||| | ||||||||| |||| ||||||||    
T  46625357 acttcgcttaagcgacggctggctcgcttaagcgacctgcttacag 46625402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 13572361 - 13572397
Alignment:
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaa 323  Q
    |||||||||| |||||||||| |||||||||||||||    
T  13572361 ttcgcttacccgttcgctcacagttcgcttaagcgaa 13572397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 13679081 - 13679113
Alignment:
Q  337 attctgggcagcttgcttgaatgctcgcttaag 369  Q
    |||||||| ||||||||||||||||||||||||    
T  13679081 attctgggtagcttgcttgaatgctcgcttaag 13679113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 14320220 - 14320192
Alignment:
Q  174 cagttcgctcacggttcgcttgagcgaac 202  Q
    |||||||||||||||||||||||||||||    
T  14320220 cagttcgctcacggttcgcttgagcgaac 14320192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 12167613 - 12168037
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  12167613 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 12167711  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  12167712 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 12167811  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12167812 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 12167911  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  12167912 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagtgcaaaac 12168011  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  12168012 ctacggtttcagacctcttctcactc 12168037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 19286522 - 19286946
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  19286522 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 19286620  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  19286621 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 19286720  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19286721 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 19286820  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  19286821 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcatctgggcagtgcaaaac 19286920  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  19286921 ctacggtttcagacctcttctcactc 19286946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 19877706 - 19878130
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  19877706 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 19877804  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  19877805 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 19877904  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19877905 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 19878004  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||||||||||    
T  19878005 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccactcgtctgggcagtgcaaaac 19878104  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  19878105 ctacggtttcagacctcttctcactc 19878130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Complemental strand, 19786674 - 19786250
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  19786674 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcattaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 19786576  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||           ||||||||||||||||||||||||||||||||||    
T  19786575 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcacttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 19786476  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19786475 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 19786376  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  19786375 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccattcatctgggcagtgcaaaac 19786276  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  19786275 ctacggtttcagacctcttctcactc 19786250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 19883482 - 19883906
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||| | |||||||||||||||||||||    
T  19883482 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctaattaaggttcacttcgcttaagc 19883580  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  19883581 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 19883680  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19883681 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaaatcttagcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 19883780  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||    
T  19883781 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccactcgtctgggcagtgcaaaac 19883880  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  19883881 ctacggtttcagacctcttctcactc 19883906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 90 - 442
Target Start/End: Complemental strand, 25470448 - 25470084
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct------- 182  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||||||           
T  25470448 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacgtctagttcgcttaagcgaccaacttacagtaggttctgggctcagttcgcttacgggt 25470349  T
Q  183 ----cacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaa 278  Q
        ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  25470348 cgctcacggttcgcttgagcgaattttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattctagacagaaccaa 25470249  T
Q  279 acttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatg 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| | ||    
T  25470248 acttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgttcgcttaagcgacaggtg 25470149  T
Q  379 cttcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  25470148 cttcgcttaagcgaccattcatctgggcagtgcaaaaacctacggtttcagactccttctcactc 25470084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 96 - 430
Target Start/End: Complemental strand, 34640727 - 34640381
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------ca 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||           ||    
T  34640727 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctca 34640628  T
Q  185 cggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaa 284  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34640627 cggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaa 34640528  T
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacggg-taaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  34640527 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcg 34640428  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaacctacggtttcagac 430  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  34640427 cttaagcgaccattcgtctggacagtgcaaaacctacggtttcagac 34640381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 96 - 430
Target Start/End: Complemental strand, 34647401 - 34647055
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------ca 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||           ||    
T  34647401 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctca 34647302  T
Q  185 cggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaa 284  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34647301 cggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaa 34647202  T
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacggg-taaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  34647201 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcg 34647102  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaacctacggtttcagac 430  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  34647101 cttaagcgaccattcgtctggacagtgcaaaacctacggtttcagac 34647055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 52 - 442
Target Start/End: Complemental strand, 29614927 - 29614530
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgacc 151  Q
    |||| ||||||||||  ||||||||||| || ||| | |||||||   |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  29614927 agaatgctcaagaagttccctcatgcacgaaacaaaagttcagaa---ggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgacc 29614831  T
Q  152 agcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtc 240  Q
      |||||||||||| |||||||||| |||||           ||||||||||||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  29614830 gacttacagtaggt-ctgggttcagctcgcttacgggttgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcactaggtc 29614732  T
Q  241 gcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattc 340  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  29614731 gcttaccattcgcttgagcgaatccttggcagaatcaaacttaattttcgcttaccaactcgctcactgttcgcttaagcgaacgggtaaaatcgcattc 29614632  T
Q  341 tgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcac 440  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||||||    
T  29614631 tgggcagtttgcatgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgtgcagtgcaaaacctacggtttcagacctcttctcac 29614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 117 - 442
Target Start/End: Complemental strand, 21365195 - 21364859
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||           |||||||||||||||||||||||    
T  21365195 ttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaacttt 21365097  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21365096 ggacagaatcaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctc 21364997  T
Q  306 acggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctggg 405  Q
    || ||||||||| |||||||||||||||| ||||||||| || |  | |||||| ||||||||| ||||||| ||||||||||||||||| || ||||||    
T  21364996 actgttcgcttaggcgaacgggtaaaatcacattctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtctggg 21364897  T
Q  406 tagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     || | |||| |||||  |||||||||||| |||||||    
T  21364896 cagggtaaaagctacgattttcagacttctcctcactc 21364859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 117 - 442
Target Start/End: Complemental strand, 23969177 - 23968841
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||           |||||||||||||||||||||||    
T  23969177 ttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaacttt 23969079  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23969078 ggacagaatcaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctc 23968979  T
Q  306 acggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctggg 405  Q
    || ||||||||| |||||||||||||||| ||||||||| || |  | |||||| ||||||||| ||||||| ||||||||||||||||| || ||||||    
T  23968978 actgttcgcttaggcgaacgggtaaaatcacattctgggtagttcacatgaatgttcgcttaagcgacggatacttcgcttaagcgaccaatcgtctggg 23968879  T
Q  406 tagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     || | |||| |||||  |||||||||||| |||||||    
T  23968878 cagggtaaaagctacgattttcagacttctcctcactc 23968841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 20008522 - 20008329
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  20008522 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 20008423  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  20008422 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 20008329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 239 - 415
Target Start/End: Original strand, 18799909 - 18800085
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  |||||||||||||||||||||||||| ||||   |||||||||||||  | |||||||| ||||||||||||||||||| |||||| |||    
T  18799909 tcgcttacggttcgcttaagcgaattcttggcagaatcaaatcaaattttcgcttacaggctcgctcactgttcgcttaagcgaacgggcaaaatcacat 18800008  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||| ||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||    
T  18800009 tcttggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 18800085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 389
Target Start/End: Complemental strand, 21565776 - 21565627
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  ||||||| |||||| |||||||| || |||| |   ||||||||||| || |||||||||||||||||||||||||||| ||| ||||||    
T  21565776 tcgcttacggttcgcttgagcgaactcttggcataatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaa-tcgcat 21565678  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaag 389  Q
    ||||||||||||||| ||||||||||||||| ||||| || ||||||||||    
T  21565677 tctgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag 21565627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 24513383 - 24513253
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  | |||||||| |||| ||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||| ||||| |  |||||    
T  24513383 ttttcgcttacaggctcgctcactgttcacttaagcgaactgacaaaatcgaattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgc 24513284  T
Q  385 ttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||||| |||||||||    
T  24513283 ttaagcgaccattcatctgggcagtgcaaaa 24513253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 21565853 - 21565692
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||  ||||||||||||||||| | |||||||||||| |||| |||||||||| || |||||||| | ||||| ||||||||||||||||    
T  21565853 ggctgactaaggtcaacttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagt-ctgggttctgctcgcttacggttcgcttgagcg 21565755  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    |||| | | || ||| ||| |||||||||||| ||||| ||||| ||  ||||||||||||||    
T  21565754 aactcttggcataatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaa 21565692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 201
Target Start/End: Original strand, 18799832 - 18799932
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||| | ||||| ||||||||||| ||||    
T  18799832 ggctgactaaggttgacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaag-tctgggttccgctcgcttacggttcgcttaagcg 18799930  T
Q  200 aa 201  Q
    ||    
T  18799931 aa 18799932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 9187025 - 9187140
Alignment:
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattca 399  Q
    |||||||  |||||||||||||||| |  ||||  | ||||| ||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  9187025 tcgctcattgttcgcttaagcgaactgacaaaacagaattctaggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattca 9187124  T
Q  400 tctgggtagtgcaaaa 415  Q
    |||||| |||||||||    
T  9187125 tctgggcagtgcaaaa 9187140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 20008625 - 20008529
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    ||||||||| ||||   ||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  20008625 aaaaggctgtctaacactcagttcgcttaagcaacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 20008529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 19471874 - 19471745
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||  |||| |||| ||||||||||||||||| |  | | || | ||||||||  |||| |||||||||||||||||| ||||| |  ||||    
T  19471874 ttttcgcttacgggttccctcatggttcgcttaagcgaactg--acattcagaattctgggttgcttacttgaatgctcgcttaagcgacgggtcgttcg 19471777  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||||||||||||||||||||| |||||||||    
T  19471776 cttaagcgaccattcatctgggcagtgcaaaa 19471745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 25396689 - 25396818
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacggg--taaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttc 382  Q
    |||||||||||  ||||||||| ||||||||||||||||||||  | | |    ||||| ||  |||| |||||||||||||||||| || || |  |||    
T  25396689 ttttcgcttacgggttcgctcatggttcgcttaagcgaacgggcttcagaa---attctaggttgcttacttgaatgctcgcttaagcgatgggtcgttc 25396785  T
Q  383 gcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||||||| |||| ||||    
T  25396786 gcttaagcgaccattcatctgggcagtgtaaaa 25396818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 262
Target Start/End: Complemental strand, 24513469 - 24513345
Alignment:
Q  137 ttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactt-tggacagaatgaaaatggtttttcgctcaca 235  Q
    |||||||||| |||| ||| |||| | ||| ||||||| | ||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||| |||    
T  24513469 ttcgcttaagcgaccggctcacagaaagtt-tgggttccgctcgctaacggttcgcttgagcgaacttctgga-agaatgaaaatgatttttcgcttaca 24513372  T
Q  236 aggtcgcttaccattcgcttaagcgaa 262  Q
     | ||||| ||  ||| ||||||||||    
T  24513371 ggctcgctcactgttcacttaagcgaa 24513345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 369
Target Start/End: Complemental strand, 19300272 - 19300203
Alignment:
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 369  Q
    ||||| ||||||||||||||||||||| ||||| |  ||||||||  ||| |||||||||||||||||||    
T  19300272 tcgcttacggttcgcttaagcgaacggctaaaaacaaattctgggttgctagcttgaatgctcgcttaag 19300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 404
Target Start/End: Original strand, 31251953 - 31252057
Alignment:
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgac-ggatgcttcgcttaagcgaccattc 398  Q
    ||||||||||||||||||||||||||| ||||  |   |||||||||||   |||||  ||||||||||| ||| ||||| |||||||||||||||| ||    
T  31251953 tcgctcacggttcgcttaagcgaacggctaaagacaatttctgggcagcgatcttgatcgctcgcttaagcgacgggatg-ttcgcttaagcgaccactc 31252051  T
Q  399 atctgg 404  Q
    ||||||    
T  31252052 atctgg 31252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 511
Target Start/End: Original strand, 20638167 - 20638203
Alignment:
Q  475 acattaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||||||||    
T  20638167 acattaagacttaatgatgatgttaattataatctgt 20638203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 29613818 - 29613784
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  29613818 tcaaaataaaataaaataataactagggcgttaca 29613784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 9099769 - 9099690
Alignment:
Q  75 tgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||| |||||| ||||||||||| ||||||||||   ||| |||||||||||||||  ||| ||||||||| ||||||||    
T  9099769 tgcacgaagcaa-aattcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagct 9099690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 477
Target Start/End: Original strand, 19287654 - 19287686
Alignment:
Q  445 aaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||    
T  19287654 aaaataaaataaaataataactagggcgttaca 19287686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 29097222 - 29097301
Alignment:
Q  75 tgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||| |||||| ||||||||||| ||||||||||   ||| |||||||||||||||  ||| ||||||||| ||||||||    
T  29097222 tgcacgaagcaa-aattcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagct 29097301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 18800823 - 18800857
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  18800823 tcaaaataaaataaaataacaactagggcgttaca 18800857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 442
Target Start/End: Complemental strand, 19300211 - 19300149
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgcaaaa-cctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||| ||||||||| || | |||| |||||| |||||||||||| |||||||    
T  19300211 tcgcttaagcgaccactcatctgggcagggtaaaaacctacgatttcagacttctcctcactc 19300149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 19300420 - 19300308
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttc-agttcgctcacggt 188  Q
    |||||| | ||||||||||||| |||  |||||||||||| || ||| ||||||||| ||||||| ||||| | ||| ||| |||  | |||||||||||    
T  19300420 ttcagatagaggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgaccagc-tacaggaagtt-tggattctcgctcgctcacggt 19300323  T
Q  189 tcgcttgagcgaact 203  Q
    ||||| |||||||||    
T  19300322 tcgctcgagcgaact 19300308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 324; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 23527880 - 23528304
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  23527880 tatactagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 23527978  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||    
T  23527979 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 23528078  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23528079 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 23528178  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    |||||||| || || |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  23528179 aagcgaacaggcaacatcgcattctgggcagcttgcttgaatgctcggttaagcgacgggtgcttcgcttaagcgaccactcatctgggcagtgcaaaac 23528278  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  23528279 ctacggtttcagacctcttctcactc 23528304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 117 - 402
Target Start/End: Complemental strand, 28890053 - 28889757
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||||||||           ||||| ||||||| |||||||||    
T  28890053 ttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaacttt 28889955  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28889954 ggacagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 28889855  T
Q  306 acggttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatct 402  Q
    || ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  ||||||||||||||| ||||||    
T  28889854 actgttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 28889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 117 - 402
Target Start/End: Complemental strand, 28896757 - 28896461
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||||||||           ||||| ||||||| |||||||||    
T  28896757 ttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaacttt 28896659  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28896658 ggacagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 28896559  T
Q  306 acggttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatct 402  Q
    || ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  ||||||||||||||| ||||||    
T  28896558 actgttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 28896461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 117 - 402
Target Start/End: Complemental strand, 28910005 - 28909709
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||||||||           ||||| ||||||| |||||||||    
T  28910005 ttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaacttt 28909907  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28909906 ggacagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 28909807  T
Q  306 acggttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatct 402  Q
    || ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  ||||||||||||||| ||||||    
T  28909806 actgttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 28909709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 117 - 402
Target Start/End: Complemental strand, 28931697 - 28931401
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||||||||           ||||| ||||||| |||||||||    
T  28931697 ttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaacttt 28931599  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28931598 ggacagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 28931499  T
Q  306 acggttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatct 402  Q
    || ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  ||||||||||||||| ||||||    
T  28931498 actgttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 28931401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 117 - 402
Target Start/End: Complemental strand, 28946400 - 28946104
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaacttt 205  Q
    |||||||||||||||||||  ||||||||| ||||| |||||||||||| ||||||||||||||||           ||||| ||||||| |||||||||    
T  28946400 ttcgcttaagcgacggctatctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggctcgcttgggcgaacttt 28946302  T
Q  206 ggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 305  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28946301 ggacagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctc 28946202  T
Q  306 acggttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatct 402  Q
    || ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  ||||||||||||||| ||||||    
T  28946201 actgttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccactcatct 28946104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 199 - 402
Target Start/End: Complemental strand, 28925491 - 28925287
Alignment:
Q  199 gaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccag 298  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28925491 gaactttggacagaaacaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccag 28925392  T
Q  299 ttcgctcacggttcgcttaagcgaacggg-taaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccat 396  Q
    ||||||||| ||||||||||||||||||| ||||||| |  ||||||||||| | | |||||| ||||||||| ||||| ||  |||||||||||||||     
T  28925391 ttcgctcactgttcgcttaagcgaacgggataaaatctgatttctgggcagc-tacatgaatgttcgcttaagcgacggctggctcgcttaagcgaccac 28925293  T
Q  397 tcatct 402  Q
    ||||||    
T  28925292 tcatct 28925287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 187 - 331
Target Start/End: Original strand, 20819639 - 20819783
Alignment:
Q  187 gttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatt 286  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20819639 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 20819738  T
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaa 331  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  20819739 ttcgcttaccagttcgctcacagttcgcttaagcgaacgggtaaa 20819783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 187 - 331
Target Start/End: Original strand, 20826739 - 20826883
Alignment:
Q  187 gttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatt 286  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20826739 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 20826838  T
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaa 331  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  20826839 ttcgcttaccagttcgctcacagttcgcttaagcgaacgggtaaa 20826883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 22460637 - 22460830
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |    
T  22460637 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattatgggtagtt 22460736  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  22460737 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 22460830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 22467261 - 22467454
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |    
T  22467261 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattatgggtagtt 22467360  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  22467361 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 22467454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 19236381 - 19236574
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  19236381 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 19236480  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| |||||||||  |||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||| ||| |||||||    
T  19236481 cacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacctctcctcactc 19236574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 323
Target Start/End: Complemental strand, 28933128 - 28932980
Alignment:
Q  178 tcgctcacggttcgcttgagcgaactttggacagaatgaaaa-tggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaa-c 275  Q
    |||||||||| ||||||  |||||||||||||||||  |||| ||||||||||||||||||||| |||||||||||| ||| ||||||  ||||| || |    
T  28933128 tcgctcacggctcgctttggcgaactttggacagaaacaaaaatggtttttcgctcacaaggtcccttaccattcgcctaaccgaatttctggcaaaacc 28933029  T
Q  276 caaacttaattttcgcttaccagttcgctcac-ggttcgcttaagcgaa 323  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  28933028 caaacttaattttcgcttaccatttcgctcactggttcgcttaagcgaa 28932980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 285 - 442
Target Start/End: Complemental strand, 18408481 - 18408322
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  | |||||||| ||||||||||| |||| |  ||||  | ||||||||||||||||||||||||||||||||| ||||| |  |||||    
T  18408481 ttttcgcttacaggctcgctcacagttcgcttaagtgaactgacaaaacaggattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgc 18408382  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctac-ggtttcagacttcttctcactc 442  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||| || | |||||||||    
T  18408381 ttaagcgaccattcatctcggtagtgcaaaaacctacgggtttcaaaccttttctcactc 18408322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 19236299 - 19236363
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  19236299 ttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgct 19236363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 415
Target Start/End: Complemental strand, 22439319 - 22439157
Alignment:
Q  253 cttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgc 352  Q
    |||||||||||||||||||||| ||||   ||||||||||||| || |||||| | |||||||| ||||||||| ||||  ||  || ||||  |||  |    
T  22439319 cttaagcgaattcttggcagaatcaaatcgaattttcgcttacaagctcgctctctgttcgcttgagcgaacggctaaagacgatttttgggttgctaac 22439220  T
Q  353 ttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
     |||||| ||||||||| ||||| |  |||||||||||||| ||||||||||  |||||||||    
T  22439219 atgaatgttcgcttaagcgacgggtcgttcgcttaagcgactattcatctggacagtgcaaaa 22439157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 22460534 - 22460619
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    ||||||||| ||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  22460534 aaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcaattcgct 22460619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 22467181 - 22467243
Alignment:
Q  119 cgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  22467181 cgcttaagcgacggctagttcgcttaaccgaccagcttacagtagg-tctgggttcagttcgct 22467243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 34829455 - 34829520
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    |||||||||||| ||||||||| ||| ||||||||||||| || ||| ||||||||| ||||||||    
T  34829455 ttcagaaaaaggttgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagct 34829520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 20781103 - 20781182
Alignment:
Q  75 tgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||| |||||| ||||||||||||||||||||||   | | |||||||||||||||| ||| ||||||||| ||||||||    
T  20781103 tgcacgaagcaa-aattcagaaaaaggctgactaacacttagttcgcttaagcgacgggtagctcgcttaagcgaccagct 20781182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 18408615 - 18408521
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttg 195  Q
    |||||||||||||    |||||||||||||||||||||| ||||||| |||| |||||||| | |||  |||||| | ||||| ||||||||||||    
T  18408615 ggctgactaaggtcattttcgcttaagcgacggctagtttgcttaagcgaccggcttacagaaagtt-ggggttccgctcgctaacggttcgcttg 18408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 20772342 - 20772407
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||||||| ||||||||||   ||| |||||||||||||||| ||| ||||||||| ||||||||    
T  20772342 ttcagaaaagggctgactaacactcagttcgcttaagcgacgggtagctcgcttaagcgaccagct 20772407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 478
Target Start/End: Original strand, 23529023 - 23529056
Alignment:
Q  445 aaaataaaataaaataataactagggcgttacat 478  Q
    ||||||||||||||||||||||||||||||||||    
T  23529023 aaaataaaataaaataataactagggcgttacat 23529056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 24930626 - 24930547
Alignment:
Q  75 tgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||| |||||| ||||||||||| ||||||||||   ||| |||||||||||||||  ||| ||||||||| ||||||||    
T  24930626 tgcacgaagcaa-aattcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagct 24930547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 25421768 - 25421733
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    |||| |||||||||||||||||||||||||||||||    
T  25421768 cattgagacttaatgatgatgttaattataatctgt 25421733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 25431630 - 25431595
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    |||| |||||||||||||||||||||||||||||||    
T  25431630 cattgagacttaatgatgatgttaattataatctgt 25431595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 9078183 - 9078153
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  9078183 agacttaatgatgatgttaattataatctgt 9078153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Complemental strand, 13025545 - 13025515
Alignment:
Q  477 attaagacttaatgatgatgttaattataat 507  Q
    |||||||||||||||||||||||||||||||    
T  13025545 attaagacttaatgatgatgttaattataat 13025515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Complemental strand, 13095729 - 13095699
Alignment:
Q  477 attaagacttaatgatgatgttaattataat 507  Q
    |||||||||||||||||||||||||||||||    
T  13095729 attaagacttaatgatgatgttaattataat 13095699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 22438435 - 22438401
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  22438435 tcaaaataaaataaaataacaactagggcgttaca 22438401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 23390382 - 23390416
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  23390382 attaagacttaatgaggatgttaattataatctgt 23390416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 24493803 - 24493769
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||| |||||||||||||||||||||    
T  24493803 attaagacttaataatgatgttaattataatctgt 24493769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 27009526 - 27009563
Alignment:
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaac 324  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  27009526 ttcgcttacctgttcgctcacagttcgcttaagcgaac 27009563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 28933200 - 28933135
Alignment:
Q  117 ttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    ||||||||||| |||||||  ||||||||  ||||| ||||||||||||   ||||||||||||||    
T  28933200 ttcgcttaagccacggctatctcgcttaaacgaccaacttacagtaggtctggggttcagttcgct 28933135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 319; Significance: 1e-180; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 28 - 442
Target Start/End: Complemental strand, 41455906 - 41455479
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41455906 tatacaagttaaagaggaagttaaagaacgctcaggaagtcccctcatgcactaagcaacagttcagaaaaaggctgactaaggttcacttcgcttaagc 41455807  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| |    
T  41455806 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatca 41455707  T
Q  217 aaa--tggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgc 314  Q
    |||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41455706 aaaattggtttttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgcccacggttcgc 41455607  T
Q  315 ttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaa 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||| |||    
T  41455606 ttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggattcttcgcttaagcgaccactcatctgggcagtgtaaa 41455507  T
Q  415 acctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||| |||||||||||    
T  41455506 acctacggtttcagacctcttctcactc 41455479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 187 - 442
Target Start/End: Complemental strand, 10390083 - 10389828
Alignment:
Q  187 gttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatt 286  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10390083 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagagtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 10389984  T
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgctt 386  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10389983 ttcgcttactagttcgctcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgctt 10389884  T
Q  387 aagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  10389883 aagcgaccattcatctgggcagtgcaaaacctacggtttcagactccttctcactc 10389828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 187 - 442
Target Start/End: Complemental strand, 10415172 - 10414917
Alignment:
Q  187 gttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatt 286  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10415172 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagagtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 10415073  T
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgctt 386  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10415072 ttcgcttactagttcgctcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgctt 10414973  T
Q  387 aagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  10414972 aagcgaccattcatctgggcagtgcaaaacctacggtttcagactccttctcactc 10414917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 187 - 442
Target Start/End: Complemental strand, 10421842 - 10421587
Alignment:
Q  187 gttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatt 286  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10421842 gttcgcttgagcgaaatttggacagaatcaaaatggtttttcgctcacagagtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaatt 10421743  T
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgctt 386  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10421742 ttcgcttactagttcgctcacagttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgctt 10421643  T
Q  387 aagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  10421642 aagcgaccattcatctgggcagtgcaaaacctacggtttcagactccttctcactc 10421587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 100 - 442
Target Start/End: Original strand, 24192274 - 24192627
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttca-----------gttcgctcacggt 188  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||||||           |||||||||||||    
T  24192274 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagt-ctgggttcaactcacttacggttcgctcacggt 24192372  T
Q  189 tcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatttt 288  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||  ||||||||||| ||| |||||||||| |||| ||||||||    
T  24192373 tcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaccgggtcgcttacggttcgcttaagcaaatccttggcagaatcaaatttaatttt 24192472  T
Q  289 cgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaa 388  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| || || | ||||||||||    
T  24192473 cgcttaccagttcgctcactgtttgcttaagcgaacgggaaaaatcgcattatgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaa 24192572  T
Q  389 gcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||| ||||||||| ||||| |||||||||| |||||||| |||||||||||    
T  24192573 gcgaccaatcatctgggcagtgcaaaaacctacgatttcagacctcttctcactc 24192627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 309 - 442
Target Start/End: Complemental strand, 24934343 - 24934210
Alignment:
Q  309 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtag 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||    
T  24934343 gttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccattcatctgggcag 24934244  T
Q  409 tgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||||||| |||||||||||||| ||||||||||    
T  24934243 tgcaaaacatacggtttcagactccttctcactc 24934210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 17131211 - 17131405
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggt-aaaatcgcattctgggcagc 348  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||     
T  17131211 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaaatcacattctgggtagt 17131310  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
    |  | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  17131311 tcacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 17131405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 239 - 442
Target Start/End: Complemental strand, 16802052 - 16801848
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  ||||||| |||||||||||||||||| ||||   |||||||||||||||| || ||||| ||||||||||||||||| | ||||||| ||    
T  16802052 tcgcttacggttcgcttgagcgaattcttggcagaatcaaatcaaattttcgcttaccagctcactcacagttcgcttaagcgaacgcgcaaaatcgtat 16801953  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttct 437  Q
    ||||||||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||| | |||||||||| ||||| || ||||||    
T  16801952 tctgggcagtttgcttgaatgctcgcttaagcgacgggtccttcgcttaagcgaccattcatctgggcagtacaaaaacctacgatttcatacctcttct 16801853  T
Q  438 cactc 442  Q
    |||||    
T  16801852 cactc 16801848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 250 - 434
Target Start/End: Complemental strand, 12034019 - 12033834
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgca-ttctgggcagc 348  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||  | || ||||||||    
T  12034019 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgcttactgttcgcttaagcgaacgggtaaaatctaatttttgggcagc 12033920  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttct 434  Q
     | | |||||| ||||||||| |||||||||||| |||||||||||  |||||||||||| | |||| |||||  ||||||||||||    
T  12033919 -tacatgaatgttcgcttaagcgacggatgcttctcttaagcgaccgatcatctgggtagggtaaaagctacgattttcagacttct 12033834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 239 - 389
Target Start/End: Complemental strand, 55499711 - 55499561
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  |||| || |||||| ||||||||||| |||| |   ||||||||||| || |||||||  ||||||||||||||||||| ||||||||||    
T  55499711 tcgcttacggttcgtttgagcgaactcttggcagaatcaaattggtttttcgcttacaagctcgctcatagttcgcttaagcgaacgggaaaaatcgcat 55499612  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaag 389  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||    
T  55499611 tctgggcagcttgcttgaatgctcgcttaagcgacggctggttcgcttaag 55499561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 250 - 405
Target Start/End: Original strand, 14865326 - 14865481
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgca-ttctgggcagc 348  Q
    |||||||||||||||||||||| || |||| | |||||||||||||||| |||||||| ||||||||||||||||||||||||||  | |||||||||||    
T  14865326 tcgcttaagcgaattcttggcaaaatcaaattcaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatctaatttctgggcagc 14865425  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctggg 405  Q
     | | |||||| ||||||||| ||||| | ||||||||||||||||| || ||||||    
T  14865426 -tacatgaatgttcgcttaagcgacgggtacttcgcttaagcgaccactcttctggg 14865481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 285 - 442
Target Start/End: Complemental strand, 17241051 - 17240893
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  | || ||||| ||||||||||||||||   |||||  | ||| |||||||||||||||||||||| |||||| ||||| |  |||||    
T  17241051 ttttcgcttacaggctcactcacagttcgcttaagcgaacttctaaaacagaattatgggcagcttgcttgaatgctcacttaagcgacgggtcgttcgc 17240952  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||||  ||||| ||||||||||| |||| || |||||||||||    
T  17240951 ttaagcgaccattcatctggacagtgcaaaaacctacgggttcaaacctcttctcactc 17240893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 55499788 - 55499627
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    ||||||||||| |  ||||||||||||||||| |||||||||||||| |||| |||||||||| | ||| ||||| | ||||| |||||||| |||||||    
T  55499788 ggctgactaagatcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagtaag-tctaggttctgctcgcttacggttcgtttgagcg 55499690  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    |||| | | |||||| ||| |||||||||||| ||||| ||||| |   ||||||||||||||    
T  55499689 aactcttggcagaatcaaattggtttttcgcttacaagctcgctcatagttcgcttaagcgaa 55499627  T

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Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 14865216 - 14865319
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcga-cggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggt 188  Q
    ||||||||||||||||||||   ||| ||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||| ||||     
T  14865216 ttcagaaaaaggctgactaacactcagttcgcttaagcgaacggctagttcgcttaagcgaccagcttagagtagg-tctgggttcagttcgcttacggg 14865314  T
Q  189 tcgct 193  Q
    |||||    
T  14865315 tcgct 14865319  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 16802129 - 16802029
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||| ||||||||  ||||||||||| |||||||||| ||||||||| |||| |||||||||| | ||||||||| | ||||| ||||||||||||||||    
T  16802129 ggctaactaaggtcaacttcgcttaaacgacggctagctcgcttaagcgaccggcttacagtaag-tctgggttctgctcgcttacggttcgcttgagcg 16802031  T
Q  200 aa 201  Q
    ||    
T  16802030 aa 16802029  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 55499569 - 55499504
Alignment:
Q  361 tcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgca-aaacctacggttt 425  Q
    ||||||||||||||| || |||||||||||||||||||||||||| |||||| |||||||||||||    
T  55499569 tcgcttaagtgacggctggttcgcttaagcgaccattcatctgggcagtgcagaaacctacggttt 55499504  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 135 - 262
Target Start/End: Complemental strand, 12034072 - 12033946
Alignment:
Q  135 agttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcac 234  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||| |||| |||||| |||||| | | | |||||| ||| |   |||||||| ||    
T  12034072 agttcgcttaagcgaccagcttacagtagg-tctgggtttagttcgcttacgggtcgcttaagcgaattcttggcagaatcaaacttaattttcgcttac 12033974  T
Q  235 aaggtcgcttaccattcgcttaagcgaa 262  Q
     || ||||||||  ||||||||||||||    
T  12033973 cagctcgcttactgttcgcttaagcgaa 12033946  T

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Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 17131147 - 17131204
Alignment:
Q  135 agttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  17131147 agttcgcttaagtgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 17131204  T

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Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 13442511 - 13442475
Alignment:
Q  475 acattaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||||||||    
T  13442511 acattaagacttaatgatgatgttaattataatctgt 13442475  T

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Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 13324260 - 13324169
Alignment:
Q  352 cttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa-cctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||||| ||  | |  |||||||||||||||| |||| |||| || |||||| ||||||| ||||||| |||||||||||    
T  13324260 cttgaatgctcgcttaagcgattggtcgttcgcttaagcgaccactcatttgggcagggcaaaaacctacgggttcagacctcttctcactc 13324169  T

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Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 17488092 - 17488057
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||||||||||||||||||||||||    
T  17488092 cattaagacttaatgatgatgttaattataatctgt 17488057  T

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Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 478
Target Start/End: Complemental strand, 41454772 - 41454737
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttacat 478  Q
    ||||||||||||||||||||||||||||||||||||    
T  41454772 tcaaaataaaataaaataataactagggcgttacat 41454737  T

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Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 20698322 - 20698356
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||||||    
T  20698322 attaagacttaatgatgatgttaattataatctgt 20698356  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 19235766 - 19235687
Alignment:
Q  75 tgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||| |||||| ||||||||||| ||||||||||   ||| |||||||||||||||  ||| ||||||||| ||||||||    
T  19235766 tgcacgaagcaa-aattcagaaaagggctgactaacactcagttcgcttaagcgacgagtagctcgcttaagcgaccagct 19235687  T

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Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 442
Target Start/End: Complemental strand, 13313368 - 13313277
Alignment:
Q  352 cttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||||| || || |  |||||||||||||| | ||||||||| ||  | ||||||||||| || |||| |||||||||||    
T  13313368 cttgaatgctcgcttaagcgatgggtcgttcgcttaagcgacgactcatctgggcaggccaaaaacctacgggtttagacctcttctcactc 13313277  T

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Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 17241149 - 17241094
Alignment:
Q  176 gttcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgct 231  Q
    |||||||  ||||||||||||||||||||  |||||||||||| || |||||||||    
T  17241149 gttcgcttgcggttcgcttgagcgaacttctgacagaatgaaattgatttttcgct 17241094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Complemental strand, 17499574 - 17499543
Alignment:
Q  476 cattaagacttaatgatgatgttaattataat 507  Q
    ||||||||||||||||||||||||||||||||    
T  17499574 cattaagacttaatgatgatgttaattataat 17499543  T

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Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 13324493 - 13324416
Alignment:
Q  68 cccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaag 146  Q
    ||||| |||||| |||||| ||||||||||  |||||||||||| |||  |||||||||||| |||| | |||||||||    
T  13324493 cccctaatgcacgaagcaa-aattcagaaagtggctgactaaggctcagctcgcttaagcgaaggctggctcgcttaag 13324416  T

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Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Complemental strand, 14572823 - 14572793
Alignment:
Q  477 attaagacttaatgatgatgttaattataat 507  Q
    |||||||||||||||||||||||||||||||    
T  14572823 attaagacttaatgatgatgttaattataat 14572793  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 14576719 - 14576753
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||| |||||||||||||||||||||||||||    
T  14576719 attaagatttaatgatgatgttaattataatctgt 14576753  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 16798371 - 16798337
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  16798371 tcaaaataaaataaaataacaactagggcgttaca 16798337  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Original strand, 40213611 - 40213641
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  40213611 agacttaatgatgatgttaattataatctgt 40213641  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 509
Target Start/End: Complemental strand, 14973085 - 14973057
Alignment:
Q  481 agacttaatgatgatgttaattataatct 509  Q
    |||||||||||||||||||||||||||||    
T  14973085 agacttaatgatgatgttaattataatct 14973057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 55499589 - 55499557
Alignment:
Q  118 tcgcttaagcgacggctagttcgcttaagtgac 150  Q
    ||||||||||||||||| |||||||||||||||    
T  55499589 tcgcttaagcgacggctggttcgcttaagtgac 55499557  T

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Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 28 - 442
Target Start/End: Complemental strand, 8046639 - 8046214
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  8046639 tatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaacagttcagaaaaaggctgactaaggctcacttcgcttaagc 8046540  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatga 216  Q
    |||| |||| ||||||||| ||||| |||| ||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||| |    
T  8046539 gacgtctagctcgcttaagcgaccaacttatagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatca 8046441  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  8046440 aaatggtttttcgctcacagggtcgcttaccattcgcttaagcgaattcttggcagaatcaaacttaattttcacttaccagttcgctcacggttcgctt 8046341  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaa 415  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||    
T  8046340 aagcgaacgggtaaaatcgcattctaggcagtttacttgaatgctcgcttaagcgacggctgcttcgcttaagcgaccaatcatctgggcagtgcaaaaa 8046241  T
Q  416 cctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||| ||| |||||||    
T  8046240 cctacggtttcagacctctcctcactc 8046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 96 - 442
Target Start/End: Original strand, 53483019 - 53483377
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tca 184  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||           |||    
T  53483019 aaaaggctgactaaggttcacttcgcttaagcgacggcaagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctca 53483118  T
Q  185 cggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaa 284  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  53483119 cggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaa 53483218  T
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacggg-taaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  53483219 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcagcttgcttgactgctcgcttaagcgacggatgcttcg 53483318  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||  ||||||||||    
T  53483319 cttaagcgaccattcgtctggacagtgcaaaacctacggtttcagaccacttctcactc 53483377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 116 - 442
Target Start/End: Original strand, 15407485 - 15407811
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatg 215  Q
    |||||||||||||||||| |||||||||||| |||| ||| |||| | || || ||||| | ||||| |||||||||||||||||||||  | ||||||     
T  15407485 cttcgcttaagcgacggccagttcgcttaagcgaccggctcacagaaagt-ctaggttccgctcgctgacggttcgcttgagcgaacttctggcagaatc 15407583  T
Q  216 aaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgct 315  Q
    |||||||||||||||| ||  | |||||||   ||||||| |||||| ||||||||||| |||| | |||||||||||||  | |||||||| |||||||    
T  15407584 aaaatggtttttcgcttacgggttcgcttatggttcgcttgagcgaactcttggcagaatcaaattaaattttcgcttacaggctcgctcactgttcgct 15407683  T
Q  316 taagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaa 414  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||| |||||| ||||| |  |||||||||||||||||||||||||| ||||| |||    
T  15407684 taagcgaactgacaaaatcgcattctgggcagcttgcttgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 15407783  T
Q  415 acctacggtttcagacttcttctcactc 442  Q
    |||||||| ||||||| |||||||||||    
T  15407784 acctacgggttcagacctcttctcactc 15407811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 16147405 - 16147212
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagc 348  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  16147405 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagc 16147306  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     | | |||||| ||||||||| ||||| ||||||||||||||||||| ||||||||| || | ||||  ||||  |||||||||||| |||||||    
T  16147305 -tacatgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccactcatctgggcagggtaaaagttacgattttcagacttctcctcactc 16147212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 249 - 442
Target Start/End: Original strand, 11847584 - 11847779
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgca-ttctgggcag 347  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||| | |||||||  |    
T  11847584 ttcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacaggcaaaatcgtatttctgggtgg 11847683  T
Q  348 cttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtg-caaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||||||||| ||||| |   ||||||||||||||  ||||||||| || |  |||||||||  |||||||||||| |||||||    
T  11847684 cttgcttgaatgctcgcttaagcgacgggtagctcgcttaagcgaccgctcatctgggcagggtaaaaacctacaatttcagacttctcctcactc 11847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 16147514 - 16147412
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||| |||| |    
T  16147514 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtagg-tctgggttcagttcgcttacgggt 16147416  T
Q  190 cgct 193  Q
    ||||    
T  16147415 cgct 16147412  T

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Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 13888158 - 13888287
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||  ||||||||| ||||||||||||||||| |  | | || | ||||||||  ||||||||||||||||||||||| ||||| |  ||||    
T  13888158 ttttcgcttacgggttcgctcatggttcgcttaagcgaactg--acattcagaattctgggttgcttgcttgaatgctcgcttaagcgacgggtcgttcg 13888255  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||||||||||||||||||||| |||||||||    
T  13888256 cttaagcgaccattcatctgggcagtgcaaaa 13888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 13887301 - 13887430
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||  ||||||||| ||||||||||||||||| |  | | || | ||||||||  ||||||||||||||||||||||| ||| | |  ||||    
T  13887301 ttttcgcttacgggttcgctcatggttcgcttaagcgaactg--acattcagaattctgggttgcttgcttgaatgctcgcttaagcgacaggtcgttcg 13887398  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||||||||||||||||||||| |||||||||    
T  13887399 cttaagcgaccattcatctgggcagtgcaaaa 13887430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 339 - 442
Target Start/End: Original strand, 14486229 - 14486333
Alignment:
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttct 437  Q
    ||||||||||| ||||||||||||||||||| || || |  |||||||||||||||| ||||||||| || || ||||||||||| ||||||| ||||||    
T  14486229 tctgggcagctagcttgaatgctcgcttaagcgatgggtcgttcgcttaagcgaccactcatctgggcagggcaaaaacctacgggttcagacctcttct 14486328  T
Q  438 cactc 442  Q
    |||||    
T  14486329 cactc 14486333  T

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Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 14486052 - 14486154
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||| |||| |||||||| ||  | ||||||| | ||||||||||||||||||||||    
T  14486052 ggctgactaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacag-agagtttgggttccgctcgctcacggttcgcttgagcg 14486150  T
Q  200 aact 203  Q
    ||||    
T  14486151 aact 14486154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 415
Target Start/End: Original strand, 15244793 - 15244860
Alignment:
Q  348 cttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||| |||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||    
T  15244793 cttgcttgaattctcgcttaagcgacgggtcattcgcttaagcgaccattcatctgggcagtgcaaaa 15244860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 15307636 - 15307765
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||  ||||||||| |||||||||||| |||| |  | | || | ||||||||  ||||||||||||||||||||||| | | | |  ||||    
T  15307636 ttttcgcttacgggttcgctcatggttcgcttaagtgaactg--acattcagaattctgggttgcttgcttgaatgctcgcttaagcgtcaggtcgttcg 15307733  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||| |||||||||||| |||||||||    
T  15307734 cttaagcgatcattcatctgggcagtgcaaaa 15307765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 11847476 - 11847538
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgacca 152  Q
    |||||||| ||||||||||||| |||  ||||||||||||||| ||||||||||||| |||||    
T  11847476 ttcagaaagaggctgactaaggctcagctcgcttaagcgacgggtagttcgcttaagcgacca 11847538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 44053065 - 44053030
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||||||||||||||||||||||||    
T  44053065 cattaagacttaatgatgatgttaattataatctgt 44053030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 8834486 - 8834540
Alignment:
Q  361 tcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||    
T  8834486 tcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 8834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 477 - 510
Target Start/End: Original strand, 16239856 - 16239889
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctg 510  Q
    ||||||||||||||||||||||||||||||||||    
T  16239856 attaagacttaatgatgatgttaattataatctg 16239889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 7893935 - 7893901
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||| ||||||||||||||||||||||    
T  7893935 attaagacttaacgatgatgttaattataatctgt 7893901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 8045519 - 8045485
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||| ||||||||||||    
T  8045519 tcaaaataaaataaaataataattagggcgttaca 8045485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Original strand, 16377413 - 16377443
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  16377413 agacttaatgatgatgttaattataatctgt 16377443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Original strand, 8834453 - 8834498
Alignment:
Q  348 cttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgac 393  Q
    |||||||||||||||||||||| ||||| |  ||||||||||||||    
T  8834453 cttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgac 8834498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 23865862 - 23866286
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | |||||||||||||||||||||  |||||||||||||||    
T  23865862 tatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaaaaggctgactaagactcacttcgcttaagc 23865961  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||| ||||||||| ||||| |||||||||||| |||||||||||||||           ||||||||||||||||||||||||||||||||| |    
T  23865962 gacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatca 23866060  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23866061 aaatggtttttcgatcacggggtcgcttaccattcgcttaagcgaatttttggcagaaccaaacttaattttcgcttaccagttcgctcatggttcgctt 23866160  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaac 416  Q
    ||||||||||||| ||||||||||||||||| |  |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  23866161 aagcgaacgggtagaatcgcattctgggcagttaccttgaatgctcgcttaagcgacgggtgcttcgcttaagcgaccaatcatctgggcagtgcaaaac 23866260  T
Q  417 ctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||||||||    
T  23866261 ctacggtttcagacctcttctcactc 23866286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 137 - 442
Target Start/End: Original strand, 17053949 - 17054265
Alignment:
Q  137 ttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatgaaaatggttt 225  Q
    |||||||||| ||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||    
T  17053949 ttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatgaaaatggttt 17054048  T
Q  226 ttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacg 325  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17054049 ttcgctcacagggtcgcttaccattcgcttaagcgaaatcttggcagaacccaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacg 17054148  T
Q  326 ggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggttt 425  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  17054149 ggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatacttcgcttaagcgaccactcatctgggcagtgcaaaacctacggttt 17054248  T
Q  426 cagacttcttctcactc 442  Q
    ||||| |||||||||||    
T  17054249 cagacctcttctcactc 17054265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 116 - 442
Target Start/End: Complemental strand, 14057271 - 14056945
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatg 215  Q
    ||||||||||||||||||||| ||||||||| |||| ||| |||| | || |||||||| | ||||| |||||||||||||||||||||  | ||||||     
T  14057271 cttcgcttaagcgacggctagctcgcttaagcgaccggctcacagaaagt-ctgggttccgctcgctgacggttcgcttgagcgaacttatggcagaatc 14057173  T
Q  216 aaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgct 315  Q
    ||||||||||||| |||||  | |||||||   ||||||| |||||| ||||||||||| |||| | || |||||||||| || |||||||| |||||||    
T  14057172 aaaatggtttttcactcacgggttcgcttatggttcgcttgagcgaactcttggcagaatcaaaataaaatttcgcttacaagctcgctcactgttcgct 14057073  T
Q  316 taagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaa 414  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||| ||||| |||    
T  14057072 taagcgaacgggcaaaatcgtattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 14056973  T
Q  415 acctacggtttcagacttcttctcactc 442  Q
    |||||||| |||| || |||||||||||    
T  14056972 acctacgggttcaaacctcttctcactc 14056945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 24321245 - 24321052
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  24321245 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 24321146  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||| ||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  24321145 cacgtgaatgttcgcttaagcgacggatgctttgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 24321052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 285 - 442
Target Start/End: Original strand, 25111492 - 25111650
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |  |||||    
T  25111492 ttttcgcttacgggttcgctcattgttcgcttaagcgaacgggcaaaatcgcattctgggcagcttgcttgaatgctcgcttaaacgacgggtcgttcgc 25111591  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||||| ||||| ||||||||| | |||| || |||||||||||    
T  25111592 ttaagcgaccattcatctgggcagtgcaaaaacctacaggttcaaacctcttctcactc 25111650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 442
Target Start/End: Original strand, 18613788 - 18613947
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    ||||||||||| ||||||||  | |||||||||||||||| |  ||| | | ||||||||||||||||||||||||||||||||| ||||| |  |||||    
T  18613788 ttttcgcttacaagttcgctagcagttcgcttaagcgaactgacaaattagaattctgggcagcttgcttgaatgctcgcttaagcgacggttttttcgc 18613887  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctac-ggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||| || |||||||||||    
T  18613888 ttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaacctcttctcactc 18613947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 24321348 - 24321252
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    ||||||||| ||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  24321348 aaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 24321252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 17053869 - 17053962
Alignment:
Q  33 tagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgac 130  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||| |||||| | |||| |||||||||| ||||||||||||||||||||||||    
T  17053869 tagttaaagaggaagttaaagaacgctcaagaag-tccctcatgcact-agcaac-agtcag-aaaaggctgattaaggttcacttcgcttaagcgac 17053962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 25111385 - 25111499
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatg 215  Q
    |||||||||||||||||| |||||||||||| ||||  || |||| | || |||||||| | ||||| |||||||||||||||||||||  | ||||||     
T  25111385 cttcgcttaagcgacggccagttcgcttaagcgaccgactcacagaaagt-ctgggttccgctcgctgacggttcgcttgagcgaacttctggcagaatc 25111483  T
Q  216 aaaatggtttttcgct 231  Q
    ||||||||||||||||    
T  25111484 aaaatggtttttcgct 25111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 21839979 - 21840047
Alignment:
Q  347 gcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||| ||| |||||||  |||||||||| ||||||||||||||| |||||||||    
T  21839979 gcttgcttgaatgctcgctcaagcgacggatcgttcgcttaagtgaccattcatctgggcagtgcaaaa 21840047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 21931275 - 21931343
Alignment:
Q  347 gcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||| ||| |||||||  ||||||| || ||||||||||||||| |||||||||    
T  21931275 gcttgcttgaatgctcgctcaagcgacggatcgttcgcttcagagaccattcatctgggcagtgcaaaa 21931343  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 21923814 - 21923848
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||||||    
T  21923814 attaagacttaatgatgatgttaattataatctgt 21923848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 160
Target Start/End: Original strand, 18613619 - 18613663
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  18613619 cttcgcttaagcgacggctggttcgcttaagcgacctgcttacag 18613663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 6759487 - 6759457
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  6759487 agacttaatgatgatgttaattataatctgt 6759457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 18818295 - 18818329
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  18818295 attaagacttaatgaggatgttaattataatctgt 18818329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 20536443 - 20536409
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  20536443 attaagacttaatgaggatgttaattataatctgt 20536409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 23648788 - 23648754
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||| ||||||||||||||||||||||||||    
T  23648788 attaagacctaatgatgatgttaattataatctgt 23648754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 96 - 442
Target Start/End: Complemental strand, 5706762 - 5706405
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------ca 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||           ||    
T  5706762 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtaggctctgggctcagttcgcttacgggtcgctca 5706663  T
Q  185 cggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaa 284  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5706662 cggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacagggtcgcttaccattcgcttgagcgaattcttggcagaaccaaacttaa 5706563  T
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5706562 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacggatgcttcgc 5706463  T
Q  385 ttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||  ||||||||||    
T  5706462 ttaagcgaccattcgtctggacagtgcaaaacctacggtttcagaccacttctcactc 5706405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 52 - 369
Target Start/End: Original strand, 26583121 - 26583448
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgacc 151  Q
    |||| |||||||||| |||||| ||||| || ||| | ||||||| |||||||||||||  | |||||||||||||||||||||||||||||||| ||||    
T  26583121 agaatgctcaagaagtcccctcctgcacgaaacaaaagttcagaagaaggctgactaagacttacttcgcttaagcgacggctagttcgcttaagcgacc 26583220  T
Q  152 agcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtc 240  Q
     ||||||||||||| |||||||||| ||||           |||||||||||||||||||||||  |||||||| |||||||||||||||||||  ||||    
T  26583221 ggcttacagtaggt-ctgggttcagctcgcttacgggtcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcactgggtc 26583319  T
Q  241 gcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattc 340  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  26583320 gcttaccattcgcttaagcgaatccttggcagaatcaaacttaattttcgcttaccagttcactcactgttcgcttaagcgaacgggtaaaatcgcattc 26583419  T
Q  341 tgggcagcttgcttgaatgctcgcttaag 369  Q
    || ||||||||||||||||||||||||||    
T  26583420 tgagcagcttgcttgaatgctcgcttaag 26583448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 10057 - 10250
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  10057 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 10156  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  10157 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 10250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 239 - 425
Target Start/End: Complemental strand, 23102047 - 23101860
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  |||||||||||||| ||||||||||| |||| |   ||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  23102047 tcgcttacggttcgcttaagcgaactcttggcagaatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaaatcgcat 23101948  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgca-aaacctacggttt 425  Q
    |||||||||||| ||||||| |||||||||| ||||| || |||||||||||||||||||||||||| |||||| |||||||||||||    
T  23101947 tctgggcagcttccttgaattctcgcttaagcgacggctggttcgcttaagcgaccattcatctgggcagtgcagaaacctacggttt 23101860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 25181475 - 25181356
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| || |    
T  25181475 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattatgggtagtt 25181376  T
Q  350 tgcttgaatgctcgcttaag 369  Q
      | |||||| |||||||||    
T  25181375 cacgtgaatgttcgcttaag 25181356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 239 - 389
Target Start/End: Complemental strand, 23089619 - 23089470
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcat 338  Q
    ||||||||  ||||||| |||||| |||||||| || |||| |   ||||||||||| || |||||||||||||||||||||||||||| ||| ||||||    
T  23089619 tcgcttacggttcgcttgagcgaactcttggcataatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaa-tcgcat 23089521  T
Q  339 tctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaag 389  Q
    ||||||||||||||| ||||||||||||||| ||||| || ||||||||||    
T  23089520 tctgggcagcttgctagaatgctcgcttaagcgacggctggttcgcttaag 23089470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 422
Target Start/End: Original strand, 23878331 - 23878663
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacg-----------gt 188  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| |||| |||||||||| | ||||||||| | ||||| |||           ||    
T  23878331 ggctgactaaggtcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaag-tctgggttctgctcgcttacggttcgcttgcagt 23878429  T
Q  189 tcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatttt 288  Q
    ||||||||||||| | | | |||||| |||| ||||  ||||||||| | ||||||||  ||||||||||||||| ||||||| || ||||   ||||||    
T  23878430 tcgcttgagcgaattcttggcagaatcaaaaaggttcctcgctcacaggttcgcttacggttcgcttaagcgaatccttggcataatcaaatcaaatttt 23878529  T
Q  289 cgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaa 388  Q
    ||||||| || |||||| | ||||||||  |||||||| |||   ||  |||||||  |||  | |||||| ||||||||| ||||  |  |||||||||    
T  23878530 cgcttacaagctcgctctctgttcgcttgcgcgaacggctaaggacgatttctgggttgctaacatgaatgttcgcttaagcgacgagtcgttcgcttaa 23878629  T
Q  389 gcgaccattcatctgggtagtgcaaaacctacgg 422  Q
    ||||| ||||||||||   |||||||||||||||    
T  23878630 gcgactattcatctggactgtgcaaaacctacgg 23878663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 23089696 - 23089535
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||  ||||||||||||||||| | |||||||||||| |||| |||||||||| || |||||||| | ||||| ||||||||||||||||    
T  23089696 ggctgactaaggtcaacttcgcttaagcgacgtccagttcgcttaagcgaccggcttacagtaagt-ctgggttctgctcgcttacggttcgcttgagcg 23089598  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    |||| | | || ||| ||| |||||||||||| ||||| ||||| ||  ||||||||||||||    
T  23089597 aactcttggcataatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaa 23089535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 100 - 262
Target Start/End: Complemental strand, 23102124 - 23101963
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||  ||||||||||||||||| | ||||||||||||||| | |||||||||| || |||||||| | ||||| ||||||||||| ||||    
T  23102124 ggctgactaaggtcaacttcgcttaagcgacgtccagttcgcttaagtgatcggcttacagtaagt-ctgggttctgctcgcttacggttcgcttaagcg 23102026  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    |||| | | |||||| ||| |||||||||||| ||||| ||||| ||  ||||||||||||||    
T  23102025 aactcttggcagaatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaa 23101963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 29281368 - 29281470
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |    
T  29281368 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggt 29281466  T
Q  190 cgct 193  Q
    ||||    
T  29281467 cgct 29281470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 137 - 404
Target Start/End: Original strand, 23264511 - 23264777
Alignment:
Q  137 ttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaa 236  Q
    |||||||||| |||| |||||||| ||  || |||||  | ||||| |||||||||||||||||||||  |||| |||||||||| ||||||||| ||      
T  23264511 ttcgcttaagcgaccggcttacag-agagtcggggtttcgctcgctaacggttcgcttgagcgaacttctgacataatgaaaatgatttttcgcttacgg 23264609  T
Q  237 ggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgc 336  Q
    | |||||||   ||||||| |||||| |||||||||||   || |  ||||||||||||  | |||||||| |||||||| ||||||||| ||||  ||     
T  23264610 gttcgcttatggttcgcttgagcgaactcttggcagaatggaattatattttcgcttacaggctcgctcacagttcgcttgagcgaacggctaaagacga 23264709  T
Q  337 attctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgg 404  Q
     |||||||  |||  | ||| || ||||||||| ||||| |  |||||||||| ||||||||||||||    
T  23264710 tttctgggttgctaacatgagtgttcgcttaagcgacgggtcgttcgcttaagtgaccattcatctgg 23264777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 285 - 442
Target Start/End: Original strand, 23063200 - 23063359
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  ||||||||   |||||||||||||||| |  |||   | ||| |||| |||||||||||||||||||||||| ||||| |  |||||    
T  23063200 ttttcgcttacgggttcgctcgtagttcgcttaagcgaactgacaaatcagaattatgggtagcttgcttgaatgctcgcttaagcgacgggtcgttcgc 23063299  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctac-ggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||| || | |||||||||    
T  23063300 ttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaaccttttctcactc 23063359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 9978 - 10050
Alignment:
Q  120 gcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  9978 gcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 10050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 25181578 - 25181482
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    ||||||||||||||   ||| |||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| || |||| |||||    
T  25181578 aaaaggctgactaacactcagttcgcttaagcgacggctagtttgcttaagcgaccagcttacagtagg-tctgggttcagttcacttacgggtcgct 25181482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 231
Target Start/End: Original strand, 21907760 - 21907890
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   |||||||||||||| |||||||||||||||| |||| |||||||| | |||  |||||| | ||||| ||||||||||| ||||    
T  21907760 ggctgactaaggtcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagtt-ggggttccgctcgctaacggttcgcttaagcg 21907858  T
Q  200 aactttggacagaatgaaaatggtttttcgct 231  Q
    |||||  | ||||||| || || |||||||||    
T  21907859 aacttctggcagaatggaattgatttttcgct 21907890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 29281481 - 29281534
Alignment:
Q  254 ttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcac 307  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  29281481 ttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcac 29281534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 27208394 - 27208282
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    |||||||||||||||||||||| ||| ||||||||||||| || ||| ||||||||| |||||||| |||| | |||| ||     | ||||||||||||    
T  27208394 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacagaaagttcaggtcctcgctcgctcacggtt 27208295  T
Q  190 cgcttgagcgaac 202  Q
    ||||| |||||||    
T  27208294 cgcttaagcgaac 27208282  T

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Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 27210729 - 27210617
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    |||||||||||||||||||||| ||| ||||||||||||| || ||| ||||||||| |||||||| |||| | |||| ||     | ||||||||||||    
T  27210729 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagctcacagaaagttcaggtcctcgctcgctcacggtt 27210630  T
Q  190 cgcttgagcgaac 202  Q
    ||||| |||||||    
T  27210629 cgcttaagcgaac 27210617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 23063066 - 23063126
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||| ||||||||    
T  23063066 ggctgactaaggtcaacttcgcttaagcgacggctggttcgcttaagcgaccggcttacag 23063126  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 415
Target Start/End: Original strand, 24661093 - 24661222
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatc-gcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||  ||||||||| ||||||||||||||||| |  | | || | ||| ||||  || | |||||||||||||||||| ||||| |  ||||    
T  24661093 ttttcgcttacgggttcgctcatggttcgcttaagcgaactg--acattcagaattttgggttgcgtacttgaatgctcgcttaagcgacgggtcgttcg 24661190  T
Q  384 cttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||| |||| |||||||||    
T  24661191 cttaagcgaccattcatttgggcagtgcaaaa 24661222  T

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Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 26884578 - 26884642
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagc 154  Q
    |||||||| ||||||||||||| ||| ||||||||||||| || ||| ||||||||| |||||||    
T  26884578 ttcagaaagaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagc 26884642  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 20317206 - 20317240
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  20317206 tcaaaataaaataaaataataactagggcgttaca 20317240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Complemental strand, 27753811 - 27753780
Alignment:
Q  476 cattaagacttaatgatgatgttaattataat 507  Q
    ||||||||||||||||||||||||||||||||    
T  27753811 cattaagacttaatgatgatgttaattataat 27753780  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 507
Target Start/End: Complemental strand, 22337350 - 22337320
Alignment:
Q  477 attaagacttaatgatgatgttaattataat 507  Q
    |||||||||||||||||||||||||||||||    
T  22337350 attaagacttaatgatgatgttaattataat 22337320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 22731120 - 22731154
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  22731120 attaagacttaatgaggatgttaattataatctgt 22731154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 22738066 - 22738100
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  22738066 attaagacttaatgaggatgttaattataatctgt 22738100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 23101127 - 23101093
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  23101127 tcaaaataaaataaaataacaactagggcgttaca 23101093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 23286096 - 23286062
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  23286096 attaagacttaatgaagatgttaattataatctgt 23286062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 26583440 - 26583485
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgc-aaaacctacggttt 425  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  26583440 tcgcttaagcgactattcatctgggcagtgcaaaaacctacggttt 26583485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 32465547 - 32465584
Alignment:
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaac 324  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  32465547 ttcgcttaccagttcgctcacagttcgcttaggcgaac 32465584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 28 - 442
Target Start/End: Original strand, 429 - 853
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | ||||||||| |||||||||||  |||||||||||||||    
T  429 tatactagttaaagaggaagttatagaatgctcaagaagtcccctcatgcactaagtaatagttcagaaaa-ggctgactaagactcacttcgcttaagc 527  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgc-----------tcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||           |||||||||| |||||||||||||||||||||| |    
T  528 gacggctagttcgcttaagcgaccagcttacagtaggt-ctgggttcagttcgcttacgggtcgctcacggttcgattgagcgaactttggacagaatca 626  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgctt 316  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  627 aaatggtttttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaatcatacttaattttcgcttaccagttcgctcacggttcgctt 726  T
Q  317 aagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaa 415  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||    
T  727 aagcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagagacggctgcttcgcttaagcgaccaatcatctgggcagtgcaaaaa 826  T
Q  416 cctacggtttcagacttcttctcactc 442  Q
    |||||| ||||| || |||||||||||    
T  827 cctacgatttcaaacctcttctcactc 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 234; Significance: 1e-129; HSPs: 4)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 28 - 442
Target Start/End: Complemental strand, 9382 - 8957
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||| || | || |||||| |||||||||||  |||||||||||||||    
T  9382 tatactagttaaagaggaagttacagaatgctcaagaagtcccctcatgcactaagtaaaagtttagaaaa-ggctgactaagactcacttcgcttaagc 9284  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct-----------cacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||| |    
T  9283 gacggctagctcgcttaagcgaccaacttacagtaggt-ctgggttcagttcgcttatgggtcgctcacggttcgcttgagcgaactttggacagaatca 9185  T
Q  217 aaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaact-taattttcgcttaccagttcgctcacggttcgct 315  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||||||  |||| | |||||||||||||||||||||| |||    
T  9184 aaatggtttttcgctcacggggtcgcttaccattcggttaagcgaattcttggcagaatcaaactgaaattcttgcttaccagttcgctcacggtttgct 9085  T
Q  316 taagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtg-acggatgcttcgcttaagcgaccattcatctgggtagtgcaaa 414  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||| | | || |||||||||||||| |||| ||||||||| ||||||||    
T  9084 taagcgaacgggtaaaatcgcattctgggcaatttccttgaatgctcgcttaagcgaatgggtgcttcgcttaagcaaccaatcatctgggcagtgcaaa 8985  T
Q  415 acctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||| |||||||||||    
T  8984 acctacggtttcagacctcttctcactc 8957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 2330 - 2280
Alignment:
Q  392 accattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||||||    
T  2330 accaatcatctgggcagtgcaaaacctacggtttcagacctcttctcactc 2280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 1575 - 1541
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  1575 tcaaaataaaataaaataataactagggcgttaca 1541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 8252 - 8218
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  8252 tcaaaataaaataaaataataactagggcgttaca 8218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 198; Significance: 1e-107; HSPs: 4)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 178 - 442
Target Start/End: Complemental strand, 1399 - 1134
Alignment:
Q  178 tcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaacca 277  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||| |||||||| ||||||||||||||||||| ||    
T  1399 tcgctcacggttcgcttgagcgaactttggacagaatcaaaattgtttttcgctcacggggtcgcttatcattcgctgaagcgaattcttggcagaatca 1300  T
Q  278 aacttaatttt-cgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacgga 376  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| |||||| ||||||    
T  1299 aacttaatttttcgcttaccagttcgctcacggttcgcttgagcgaacgggtaaaatcgcattctgggcagtttccttgaatgctcacttaagcgacgga 1200  T
Q  377 tgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||    
T  1199 tgcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcagacctcttctcactc 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 440 - 406
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  440 tcaaaataaaataaaataataactagggcgttaca 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 182
Target Start/End: Complemental strand, 1446 - 1406
Alignment:
Q  141 cttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    |||||| ||||||||||||||||| |||||||||||||||||    
T  1446 cttaagcgaccagcttacagtagg-tctgggttcagttcgct 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 1280 - 1252
Alignment:
Q  174 cagttcgctcacggttcgcttgagcgaac 202  Q
    |||||||||||||||||||||||||||||    
T  1280 cagttcgctcacggttcgcttgagcgaac 1252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 184 - 442
Target Start/End: Original strand, 49595 - 49854
Alignment:
Q  184 acggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaactta 283  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| || |||||    
T  49595 acggttcgattgagcgaactttggacagaatcaaaatggtttttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaatcatactta 49694  T
Q  284 attttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||    
T  49695 attttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagtttacttgaatgctcgcttaagagacggctgcttcg 49794  T
Q  384 cttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||| ||||||||| ||||| |||||||||| ||||| || |||||||||||    
T  49795 cttaagcgaccaatcatctgggcagtgcaaaaacctacgatttcaaacctcttctcactc 49854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 443 - 478
Target Start/End: Original strand, 50558 - 50593
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttacat 478  Q
    ||||||||||||||||||||||||||||||||||||    
T  50558 tcaaaataaaataaaataataactagggcgttacat 50593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 183; Significance: 9e-99; HSPs: 8)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 178 - 442
Target Start/End: Original strand, 111322 - 111575
Alignment:
Q  178 tcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaacca 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  111322 tcgctcacggttcgcttgagcgaactttggacagaatcaaaatggtttttcgctcacggggtcgcttaccattcgcttaagcgaattcttggcagaacca 111421  T
Q  278 aacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggat 377  Q
    ||||||||||||||||||||           |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||| |    
T  111422 aacttaattttcgcttacca-----------gttcgcttaagcgaacgggtaaaatcgcatactgggcagtttacttgaatgctcgcttaagcgacggct 111510  T
Q  378 gcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||    
T  111511 gcttcgcttaagcgaccaatcatctgggcagtgcaaaacctacggtttcagacctcttctcactc 111575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 270 - 442
Target Start/End: Complemental strand, 91756 - 91583
Alignment:
Q  270 cagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 369  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||| || |  | |||||| |||||||||    
T  91756 cagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaatgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaag 91657  T
Q  370 tgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     ||||||||||||||||||||||||| || |||||| || | |||| |||||  |||||||||||| |||||||    
T  91656 cgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgattttcagacttctcctcactc 91583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 270 - 442
Target Start/End: Complemental strand, 97482 - 97309
Alignment:
Q  270 cagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 369  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || |||||| || |  | |||||| |||||||||    
T  97482 cagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaatgggtaaaatcacaatctgggtagttcacatgaatgttcgcttaag 97383  T
Q  370 tgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     ||||||||||||||||||||||||| || |||||| || | |||| |||||  |||||||||| | |||||||    
T  97382 cgacggatgcttcgcttaagcgaccaatcgtctgggcagggtaaaagctacgattttcagacttttcctcactc 97309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 95 - 263
Target Start/End: Complemental strand, 91880 - 91702
Alignment:
Q  95 aaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagt-----------tcgctc 183  Q
    ||||||||| |||||   ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||           ||||||    
T  91880 aaaaaggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtagg-tctgggttcagttcgcttacgggtcgctc 91782  T
Q  184 acggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaat 263  Q
    |||||||||||| |||||||||||||||||| ||| |   |||||||| || || ||||| ||  |||||||||||||||    
T  91781 acggttcgcttgggcgaactttggacagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaat 91702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 95 - 263
Target Start/End: Complemental strand, 97606 - 97428
Alignment:
Q  95 aaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagt-----------tcgctc 183  Q
    ||||||||| |||||   ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||           ||||||    
T  97606 aaaaaggctaactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccaacttacagtagg-tctgggttcagttcgcttacgggtcgctc 97508  T
Q  184 acggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaat 263  Q
    |||||||||||| |||||||||||||||||| ||| |   |||||||| || || ||||| ||  |||||||||||||||    
T  97507 acggttcgcttgggcgaactttggacagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaat 97428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 111183 - 111284
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    ||||||||||||||  ||| ||| |||| |||||||||| |||||||||||||||| || | ||||| |||||||||||||||  |||||||||||||||    
T  111183 tatactagttaaaggagaaattatagaatgctcaagaagtcccctcatgcactaagtaatagttcag-aaaaggctgactaagactcacttcgcttaagc 111281  T
Q  128 gac 130  Q
    |||    
T  111282 gac 111284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 117160 - 117194
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  117160 tcaaaataaaataaaataataactagggcgttaca 117194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 112262 - 112296
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||||||||| |||||||||    
T  112262 tcaaaataaaataaaataataactaaggcgttaca 112296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 171; Significance: 1e-91; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 176 - 442
Target Start/End: Complemental strand, 12498 - 12233
Alignment:
Q  176 gttcgctcacggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaac 275  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||  |||||||  | |||| ||||||||||     
T  12498 gttcgctcacggttcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcacagggtcgcttacagttcgcttgcgtgaatccttggcagaat 12399  T
Q  276 caaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacgg 375  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||     
T  12398 caaacttagttttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatcgcatt-tgggcagcttgcttgaatgctcgcttaagcgacgt 12300  T
Q  376 atgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
     ||||||||||||||||||| ||||||||  ||||||||||||| |||||||||| |||||||||||    
T  12299 ctgcttcgcttaagcgaccaatcatctggccagtgcaaaacctatggtttcagacctcttctcactc 12233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 12612 - 12534
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgac 130  Q
    |||| |||||||||| |||||| ||||| |||||| | |||||||| ||||||||||||| ||||||||||||||||||    
T  12612 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgac 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 100 - 442
Target Start/End: Complemental strand, 15121 - 14779
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcag-----------ttcgctcacggt 188  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||||           ||||||||||||    
T  15121 ggctgactaaggtccacttcgcttaagcgacggctagttcgcttaagcgaccggcttacagtaagt-ctgggttcagctcgcttacggttcgctcacggt 15023  T
Q  189 tcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatttt 288  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||  ||||||||||  ||||||||||||||| |||||||||| |||| ||||||||    
T  15022 tcgcttgagcgaacttctgacagaatcaaaatggtttttcgctcaccgggtcgcttacggttcgcttaagcgaatccttggcagaatcaaatttaatttt 14923  T
Q  289 cgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaa 388  Q
    ||||||||||||           |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || || | ||||||||||    
T  14922 cgcttaccagtt-----------cgcttaagcgaacgggcaaaatcgcattctgggcagcttgcttgaatgttcgcttaagcgatggctacttcgcttaa 14834  T
Q  389 gcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||| ||||||||| ||||| |||||||||| |||||||| |||||||||||    
T  14833 gcgaccaatcatctgggcagtgcaaaaacctacgatttcagacctcttctcactc 14779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 155; Significance: 5e-82; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 185 - 442
Target Start/End: Original strand, 452 - 709
Alignment:
Q  185 cggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaa 284  Q
    |||||||||| |||||||||  |||||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||| ||||    
T  452 cggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagggtcgcttacggttcgcttaagcgaattcttggcagaatcaaatttaa 551  T
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||| | ||||||    
T  552 ttttcgcttaccagctcgctcactgttcgcttaagcgaacgggcaaaatcgcattttgggcagcttgcttgaatgttcgcttaagcgacggctacttcgc 651  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||| | |||||| || ||||| |||||||||||||||||||  ||||||||||    
T  652 ttaagcgactaatcatct-ggcagtgcaaaaacctacggtttcagaccccttctcactc 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 185 - 442
Target Start/End: Original strand, 7597 - 7854
Alignment:
Q  185 cggttcgcttgagcgaactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaa 284  Q
    |||||||||| |||||||||  |||||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||| ||||    
T  7597 cggttcgcttaagcgaacttctgacagaatcaaaatggtttttcgctcacagggtcgcttacggttcgcttaagcgaattcttggcagaatcaaatttaa 7696  T
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||| | ||||||    
T  7697 ttttcgcttaccagctcgctcactgttcgcttaagcgaacgggcaaaatcgcattttgggcagcttgcttgaatgttcgcttaagcgacggctacttcgc 7796  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||| | |||||| || ||||| |||||||||||||||||||  ||||||||||    
T  7797 ttaagcgactaatcatct-ggcagtgcaaaaacctacggtttcagaccccttctcactc 7854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 330 - 407
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgac 130  Q
    |||| |||||||| | |||||  ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  330 agaatgctcaagatgtccccttgtgcacgaagcaa-aattcagaaagaggctgactaaggttcacttcgcttaagcgac 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 7475 - 7552
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgac 130  Q
    |||| |||||||| | |||||  ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  7475 agaatgctcaagatgtccccttgtgcacgaagcaa-aattcagaaagaggctgactaaggttcacttcgcttaagcgac 7552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 155; Significance: 5e-82; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 100 - 369
Target Start/End: Original strand, 10693 - 10962
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| |||| |||||||||| || |||||||| | ||||| | ||||||||||||||    
T  10693 ggctgactaagatcaacttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaagt-ctgggttctgctcgcttagggttcgcttgagcg 10791  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagt 299  Q
    |||||  |||||||| |||||||||||||||||||| |||||||||   |||||||||||||||||| ||||||| |||| ||||||||||||||| |||    
T  10792 aacttctgacagaatcaaaatggtttttcgctcacagggtcgcttatggttcgcttaagcgaattctgggcagaatcaaatttaattttcgcttacaagt 10891  T
Q  300 tcgctcacggttcgcttaagcgaacggg-taaaatcgcattctgggcagcttgcttgaatgctcgcttaag 369  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||    
T  10892 tcgctcacggttcgcttaagcgaacgggcaaaaatcgcattctgggcaacttgcttgaatgttcgcttaag 10962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 7e-81; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 41111190 - 41111407
Alignment:
Q  28 tatactagttaaagaggaagttaaagaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagc 127  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  41111190 tatattagttaaagaggaagttaaagaacgctcaagaagtcccctcatgcactaagcaacagttcagaaaa-ggctgattaaggttcacttcgcttaagc 41111288  T
Q  128 gacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagt-----------tcgctcacggttcgcttgagcgaactttggacagaatga 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||    
T  41111289 gacggctagttcgcttaagcgaccagcttacagtaggttctgggttcagttcgcttacgggtcgctcacggttcgcttgagcgaactttggacagaatga 41111388  T
Q  217 aaatggtttttcgctcaca 235  Q
    |||||||||||||||||||    
T  41111389 aaatggtttttcgctcaca 41111407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 20851707 - 20851514
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  20851707 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 20851608  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  20851607 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 20851514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 20858334 - 20858141
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  20858334 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 20858235  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| ||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  20858234 cacgtgaatgttcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 20858141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 100 - 442
Target Start/End: Original strand, 18712131 - 18712473
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||| | |||  |||||| | ||||| ||||| ||||| ||||    
T  18712131 ggctgactaaggtcatcttcgcttaagcgacggctagttcgcttaagcgaccagcttacagaaagttg-gggttccgctcgctaacggtacgcttaagcg 18712229  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagt 299  Q
    |||||  |||||||||||| || ||||||||| ||  | ||||||||  ||||||| |||||| ||||| |||||   || |   |||| ||||||  |     
T  18712230 aacttctgacagaatgaaattgatttttcgcttacgggttcgcttacagttcgcttgagcgaactcttgacagaatggaattatttttttgcttacaggc 18712329  T
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattca 399  Q
    |||||||| ||| |||||||||||| |  ||||  | ||||||||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||    
T  18712330 tcgctcacagtttgcttaagcgaactgacaaaacagaattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattca 18712429  T
Q  400 tctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||| ||||| ||||||||||| |||| || ||| |||||||    
T  18712430 tctgggcagtgcaaaaacctacgggttcaaacctctcctcactc 18712473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 21705756 - 21705949
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  21705756 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 21705855  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| |||||||||  |||||||||||||||||||||||| ||||||||| || | |||| |||||  |||||||||||| |||||||    
T  21705856 cacgtgaatgttcgcttaagcaacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcagacttctcctcactc 21705949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 21710299 - 21710492
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |    
T  21710299 tcgcttaagcgaattcttggcagaatcaaatttaattttcgcttaccagttcgctcactgttcgcttaagcgaacgggtaaaatcacattctgggtagtt 21710398  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
      | |||||| |||||||||  |||||||||| ||||||||||||| ||||||||| || |  ||| |||||  |||||||||||| |||||||    
T  21710399 cacgtgaatgttcgcttaagcaacggatgctttgcttaagcgaccaatcatctgggcagggtgaaagctacgattttcagacttctcctcactc 21710492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 21710189 - 21710292
Alignment:
Q  89 attcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggt 188  Q
    |||| ||||||||||| ||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | |||    
T  21710189 attcggaaaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttatggt 21710287  T
Q  189 tcgct 193  Q
    |||||    
T  21710288 tcgct 21710292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 20858437 - 20858341
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    ||||||||| ||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  20858437 aaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 20858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 21705653 - 21705749
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    ||||||||| ||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  21705653 aaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 21705749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 20851810 - 20851725
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgct 182  Q
    ||||||||| ||||   ||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  20851810 aaaaggctgtctaacactcagttcgcttaagcgacggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgct 20851725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 415
Target Start/End: Complemental strand, 22030286 - 22030157
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    ||||||||||| |||||||||| |||||||| ||||||||  |   | | | ||||| ||  ||||||||||||||||||||||| ||| | |  |||||    
T  22030286 ttttcgcttacgagttcgctcatggttcgctcaagcgaactagctta-tagaattctaggttgcttgcttgaatgctcgcttaagcgactggtctttcgc 22030188  T
Q  385 ttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||||| |||||||||    
T  22030187 ttaagcgaccattcatctgggcagtgcaaaa 22030157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 19961720 - 19961789
Alignment:
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaag 369  Q
    ||||| ||||||||||||||||||||| ||||| |  ||||||||  ||| |||||||||||||||||||    
T  19961720 tcgcttacggttcgcttaagcgaacggctaaaaacaaattctgggttgctagcttgaatgctcgcttaag 19961789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 22356059 - 22356094
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||||||||||||||||||||||||    
T  22356059 cattaagacttaatgatgatgttaattataatctgt 22356094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 22357745 - 22357780
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||||||||||||||||||||||||    
T  22357745 cattaagacttaatgatgatgttaattataatctgt 22357780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 19961781 - 19961843
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgcaaaa-cctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||| ||||||||| || | |||| |||||| |||||||||||| |||||||    
T  19961781 tcgcttaagcgaccactcatctgggcagggtaaaaacctacgatttcagacttctcctcactc 19961843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 22354458 - 22354492
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  22354458 attaagacttaatgaggatgttaattataatctgt 22354492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Original strand, 50210103 - 50210133
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  50210103 agacttaatgatgatgttaattataatctgt 50210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 19961561 - 19961626
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    |||||| | ||||||||||||| |||  |||||||||||| || ||| ||||||||| ||||||||    
T  19961561 ttcagatagaggctgactaaggctcatctcgcttaagcgaagggtagctcgcttaagcgaccagct 19961626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 11157591 - 11157667
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacg 325  Q
    |||||||||||||| |  ||||||||   || ||| |||||||||||  ||||||||  ||||||||||||||||||    
T  11157591 ttcgcttaagcgaacttctggcagaatggaatttatttttcgcttacgggttcgctcctggttcgcttaagcgaacg 11157667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 509
Target Start/End: Complemental strand, 34510011 - 34509983
Alignment:
Q  481 agacttaatgatgatgttaattataatct 509  Q
    |||||||||||||||||||||||||||||    
T  34510011 agacttaatgatgatgttaattataatct 34509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 134; Significance: 2e-69; HSPs: 3)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 100 - 442
Target Start/End: Complemental strand, 23318 - 22975
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   ||||||||||||||||||||| ||||||| |  ||| ||| |||| | |||  |||||||  ||||| ||||||||||||||||    
T  23318 ggctgactaaggtcatcttcgcttaagcgacggctagctcgcttaggcaaccggctcacagaaagttg-gggttcaactcgctgacggttcgcttgagcg 23220  T
Q  200 aactttggacagaatgaaaatggttttt-cgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattt-tcgcttacca 297  Q
    |||||  | ||||||||||||||||||| |||| || || |||||||   ||||||| |||||| ||||||||||| |||| ||||||| ||||||||      
T  23219 aacttctggcagaatgaaaatggttttttcgcttacgagttcgcttatggttcgcttgagcgaactcttggcagaatcaaa-ttaatttctcgcttacag 23121  T
Q  298 gttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccatt 397  Q
    | |||||||| |||||||||||||||| |  ||||||||||||||| ||||||||||||||||||||||||| ||||| |  ||||||||||||||||||    
T  23120 gctcgctcactgttcgcttaagcgaactgacaaaatcgcattctggacagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccatt 23021  T
Q  398 catctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||||||||||| ||||||||||| || | || |||||||||||    
T  23020 catctgggtagtgcaaaaacctacgggtttaaacctcttctcactc 22975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 100 - 351
Target Start/End: Complemental strand, 15601 - 15350
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   |||||||||||||| |||||| || |||||| |||  ||| |||| | |||  |||||| | ||||| ||||||||||||||||    
T  15601 ggctgactaaggtcatcttcgcttaagcgatggctagctcacttaagcgactggctcacagaaagttg-gggttccgctcgctgacggttcgcttgagcg 15503  T
Q  200 aactttggacagaatgaaaatggt-ttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattt-tcgcttacca 297  Q
    |||||  | ||||||||||||||| |||||||| || || |||||||   ||||||| |||||| ||||| || || |||| ||||||| ||||||||      
T  15502 aacttctggcagaatgaaaatggttttttcgcttacgagttcgcttatggttcgcttgagcgaactcttgacataatcaaa-ttaatttctcgcttacag 15404  T
Q  298 gttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttg 351  Q
    | |||||||| ||||||| |||||||| |  || ||| ||||||||||||||||    
T  15403 gctcgctcactgttcgctgaagcgaactgacaagatcacattctgggcagcttg 15350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 11399 - 11433
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||| ||||||||||||||||    
T  11399 attaagacttaatgatgaggttaattataatctgt 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 102 - 442
Target Start/End: Complemental strand, 41250 - 40910
Alignment:
Q  102 ctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaa 201  Q
    |||||||||||   |||||||||||||||| |||||||||||||| || | ||| |||| |||||  |||||| | ||||| || |||||||||||||||    
T  41250 ctgactaaggtcatcttcgcttaagcgacgtctagttcgcttaagcgatcggctcacagaaggttg-gggttccgctcgctgacagttcgcttgagcgaa 41152  T
Q  202 ctttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttc 301  Q
    |||    ||||||| ||||||||||| ||| ||  | ||||||    ||   || |||||| ||||||||||| |||| | |||||||||||||  | ||    
T  41151 cttcaagcagaatgtaaatggttttttgcttacgggttcgcttctggtttcattgagcgaactcttggcagaatcaaattaaattttcgcttacaggctc 41052  T
Q  302 gctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatc 401  Q
    |||||| |||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||| |  |||||||||| |||||||||||    
T  41051 gctcactgttcccttaagcgaactgacaaaatcgcattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagtgaccattcatc 40952  T
Q  402 tgggtagtgcaaaa-cctacggtttcagacttcttctcactc 442  Q
    |||| ||||||||| ||||||| |||| || |||||||||||    
T  40951 tgggcagtgcaaaagcctacgggttcaaacctcttctcactc 40910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 4246 - 4054
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagct 349  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |    
T  4246 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagttcgctcactgttcgcttaagcgaacaggtaaaatcgtattctgggcag-t 4148  T
Q  350 tgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
    | | |||||| ||||||||| ||||| ||||||||||||||||||| |||||| || || | ||||  ||||  |||||||||||| |||||||    
T  4147 tacatgaatgttcgcttaagcgacggctgcttcgcttaagcgaccaatcatctaggcagggtaaaagttacgattttcagacttctcctcactc 4054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 4349 - 4253
Alignment:
Q  96 aaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    |||||||||||||| | ||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  4349 aaaaggctgactaacgctcagttcgcttaagcgatggctagttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 4253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 249 - 425
Target Start/End: Complemental strand, 4196 - 4019
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    ||||||| |||||| ||||||||||| |||| |   ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4196 ttcgcttgagcgaactcttggcagaatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaacgggcaaaatcgcattctgggcagc 4097  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgca-aaacctacggttt 425  Q
    ||||||||||||||||||||| ||||  || ||||||| || ||||||||||||||| |||||| |||||||||||||    
T  4096 ttgcttgaatgctcgcttaagcgacgactggttcgcttgagtgaccattcatctgggcagtgcagaaacctacggttt 4019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 102 - 262
Target Start/End: Complemental strand, 4281 - 4122
Alignment:
Q  102 ctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaa 201  Q
    |||||||||||  ||||||||||||||||| |||||||||||||| || |||||||||||| || |||||||| | ||| | ||||||||||||||||||    
T  4281 ctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgatcagcttacagtaagt-ctgggttctgctcgattacggttcgcttgagcgaa 4183  T
Q  202 ctttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    || | | |||||| ||| |||||||||||| ||||| ||||| ||  ||||||||||||||    
T  4182 ctcttggcagaatcaaattggtttttcgcttacaagctcgctcacggttcgcttaagcgaa 4122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 3290 - 3256
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  3290 tcaaaataaaataaaataacaactagggcgttaca 3256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 100 - 442
Target Start/End: Complemental strand, 35000 - 34658
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   |||||||||||||| |||||||||||||||| |||| |||||||| | |||  || ||| | ||||| ||||||||||||||||    
T  35000 ggctgactaaggtcatcttcgcttaagcgatggctagttcgcttaagcgaccggcttacagaaagttgagg-ttccgctcgctgacggttcgcttgagcg 34902  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagt 299  Q
    |||||  |||||||||||| || ||||||||| ||  | |||||||   ||||||| |||||| |||||||||||   || |   |||||| ||||  |     
T  34901 aacttctgacagaatgaaattgatttttcgcttacgggttcgcttatggttcgcttgagcgaactcttggcagaatggaattattttttcgattacaggc 34802  T
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattca 399  Q
    |||||||| ||||||||||| ||||   |||||  | |||||||| ||||||| ||||||||| |||||| ||||| |  ||||||||||||||||||||    
T  34801 tcgctcacagttcgcttaagtgaacttctaaaacagaattctgggaagcttgcgtgaatgctcacttaagcgacgggtcgttcgcttaagcgaccattca 34702  T
Q  400 tctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||| ||||| ||||||||||| ||||  | |||||||||||    
T  34701 tctgggcagtgcaaaaacctacgggttcaaccctcttctcactc 34658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 250 - 442
Target Start/End: Complemental strand, 80065 - 79872
Alignment:
Q  250 tcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcatt-ctgggcagc 348  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  ||| |||||||||    
T  80065 tcgcttaagcgaattcttggcagaatcaaacttaattttcgcttaccagctcgctcactgttcgcttaagcgaacgggtaaaatctaattcctgggcagc 79966  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
     | | |||||| ||||||||| ||||| ||||||||||||||||||| ||||||||| || | ||||  ||||  |||||||||||| |||||||    
T  79965 -tacatgaatgttcgcttaagcgacgggtgcttcgcttaagcgaccactcatctgggcagggtaaaagttacgattttcagacttctcctcactc 79872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 80174 - 80072
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||| |||| |    
T  80174 ttcagaaaaaggctgactaacactcagttcgcttaagcgacggctagctcgcttaagcgaccatcttacagtagg-tctgggttcagttcgcttacgggt 80076  T
Q  190 cgct 193  Q
    ||||    
T  80075 cgct 80072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 415
Target Start/End: Complemental strand, 81799 - 81624
Alignment:
Q  239 tcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacggg---taaaatcg 335  Q
    ||||||||  |||||||||||||| |  ||||||||   || | | |||||||||||  ||||||||||||||||||||||||||  ||   || ||       
T  81799 tcgcttacggttcgcttaagcgaacttctggcagaaaggaattaatttttcgcttacaggttcgctcacggttcgcttaagcgaaatggctctagaa--- 81703  T
Q  336 cattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
     ||||||||  |||| |||||||||||||||||| ||||| |  |||||||| |||||||||||| |||| |||||||||    
T  81702 -attctgggttgcttacttgaatgctcgcttaagcgacgggttgttcgcttatgcgaccattcatttgggcagtgcaaaa 81624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 100 - 442
Target Start/End: Complemental strand, 720 - 389
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| |||| |||||||| | |||  |||||  | ||||| ||||||||||||||||    
T  720 ggctgactaaggtcatcttcgcttaagcgacggctagttcgcttaagcgaccggcttacagaaagtt-ggggtttcgctcgctgacggttcgcttgagcg 622  T
Q  200 aactttggacagaatgaaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagt 299  Q
    |||||  |||||||||||| || ||||||||| ||  |           ||||||| |||||| |||||||||||   || |   |||||||||||  |     
T  621 aacttctgacagaatgaaattgatttttcgcttacggg-----------ttcgcttgagcgaactcttggcagaatggaattattttttcgcttacaggc 533  T
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattca 399  Q
    |||||||| |||| |||||||||||   |||||    ||||||||||||||||||||||||||||||||| ||||| |  ||||||||||| ||||||||    
T  532 tcgctcacagttcacttaagcgaacttctaaaacataattctgggcagcttgcttgaatgctcgcttaagcgacgggtcgttcgcttaagcaaccattca 433  T
Q  400 tctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||| ||||| ||||||||||| ||||  | |||||||||||    
T  432 tctgggcagtgcaaaaacctacgggttcaaccctcttctcactc 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 7656 - 7605
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgacc 151  Q
    |||||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  7656 ggctgactaaggtcatcttcgcttaagcgacggctagttcgcttaagcgacc 7605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 249 - 442
Target Start/End: Original strand, 134930 - 135113
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||           || |||||||||||||||||||||||||||||     
T  134930 ttcgcttaagcgaattcttgacagaatcaaacttaattttcgcttacccgttcgct-----------taggcgaacgggtaaaatcgcattctgggcagt 135018  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacg-gtttcagacttcttctcactc 442  Q
    || |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || | |||| |||||  ||||| |||||| |||||||    
T  135019 ttacttgaatgctcgcttaagcgacggatgcttcgcttaagcgaccaatcatctgggcagggtaaaagctacgattttcaaacttctcctcactc 135113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 135 - 193
Target Start/End: Original strand, 134867 - 134924
Alignment:
Q  135 agttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgct 193  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||| |||| |||||    
T  134867 agttcgcttaagcgaccagcttacagtagg-tctgggttcagttcgcttacgggtcgct 134924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 52 - 202
Target Start/End: Original strand, 3007 - 3156
Alignment:
Q  52 agaacgctcaagaagccccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgacc 151  Q
    |||| |||||||||| |||||| ||||| |||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  3007 agaatgctcaagaagtcccctcgtgcacgaagcaaaagttcagaaagaggctgactaaggctcacttcgcttaagcgacggctagttcgcttaagcgacc 3106  T
Q  152 agcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaac 202  Q
     |||||||||||| ||||||||  | |||||||| ||||||||||||||||    
T  3107 ggcttacagtagg-tctgggtttcgctcgctcacagttcgcttgagcgaac 3156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 298 - 442
Target Start/End: Original strand, 3191 - 3335
Alignment:
Q  298 gttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccatt 397  Q
    ||||||||||||||||||||||||||| ||     ||  | |||||||| || ||||||||| ||||||||| ||||| |   |||||||||||||||||    
T  3191 gttcgctcacggttcgcttaagcgaacaggcttcttcaaaatctgggcaactagcttgaatgttcgcttaagcgacgggtagctcgcttaagcgaccatt 3290  T
Q  398 catctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||||||| ||   ||||| || || ||||||| ||| |||||||    
T  3291 catctgggcaggcaaaaacttatgggttcagacctctcctcactc 3335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 298 - 442
Target Start/End: Complemental strand, 24096 - 23952
Alignment:
Q  298 gttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccatt 397  Q
    ||||||||||||||||||||||||||| ||    | |  | | ||||||||||||||||||||||||||||| ||||  ||||||||||||||||||| |    
T  24096 gttcgctcacggttcgcttaagcgaacaggctccaccaaaatttgggcagcttgcttgaatgctcgcttaagcgacgtctgcttcgcttaagcgaccaat 23997  T
Q  398 catctgggtagtgcaaaacctacggtttcagacttcttctcactc 442  Q
    |||||||| ||||||||||||||||||||| || |||||||||||    
T  23996 catctgggcagtgcaaaacctacggtttcatacctcttctcactc 23952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 24253 - 24188
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    |||||||| || |||||||||| |||  |||||||||||| || ||| ||||||||| ||||||||    
T  24253 ttcagaaagagactgactaaggctcatctcgcttaagcgaaggatagctcgcttaagcgaccagct 24188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 249 - 442
Target Start/End: Complemental strand, 102504 - 102310
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    ||||||| |||||| ||||||||||| |||| |   |||||||||||  | ||||||||||||||||||||||||| |  ||||  | |  ||||||| |    
T  102504 ttcgcttgagcgaactcttggcagaatcaaattattttttcgcttacaggctcgctcacggttcgcttaagcgaactgacaaaacagaaaactgggcaac 102405  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    |||||||| |||||||||||| ||||| |  |||||||||||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||    
T  102404 ttgcttgagtgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggttcaaacctcttctcactc 102310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 262
Target Start/End: Complemental strand, 102575 - 102430
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactttggacagaatg 215  Q
    |||||||||||||| |||| ||||||||||| ||||  ||||||| | |||  |||||| | ||||| |||||||||||||||||||| | | ||||||     
T  102575 cttcgcttaagcgatggctggttcgcttaagcgaccgacttacagaaagttg-gggttccgctcgctgacggttcgcttgagcgaactcttggcagaatc 102477  T
Q  216 aaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaa 262  Q
    ||| |  ||||||||| ||| | ||||| ||  ||||||||||||||    
T  102476 aaattattttttcgcttacaggctcgctcacggttcgcttaagcgaa 102430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 337 - 442
Target Start/End: Complemental strand, 15486 - 15379
Alignment:
Q  337 attctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctac-ggtttcagacttct 434  Q
    ||||||||||||| ||||||||||||||||||| ||||| |  |||||||||||||||||||||||||| ||||| ||||||||| ||||||| || | |    
T  15486 attctgggcagctagcttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaaacctacgggtttcaaaccttt 15387  T
Q  435 tctcactc 442  Q
    ||||||||    
T  15386 tctcactc 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 15661 - 15531
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcg 199  Q
    |||||||||||||   ||||||||||||||||| | ||||||||||| ||||  |||| ||   ||| ||||||  ||||||| ||||||||||||||||    
T  15661 ggctgactaaggtcatcttcgcttaagcgacggttggttcgcttaagcgaccgtcttatagagagtt-tgggtttcgttcgctaacggttcgcttgagcg 15563  T
Q  200 aactttggacagaatgaaaatggtttttcgct 231  Q
    |||||  |||| |||| ||||| |||||||||    
T  15562 aacttctgacataatggaaatgatttttcgct 15531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 430
Target Start/End: Original strand, 17407 - 17590
Alignment:
Q  249 ttcgcttaagcgaattcttggcagaaccaaacttaattttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagc 348  Q
    |||||||||||||||||| ||||||| ||||   ||||||||||||| || |||||| | |||||||| ||||||||| ||||  ||  |||||||  ||    
T  17407 ttcgcttaagcgaattctgggcagaatcaaaacaaattttcgcttacaagctcgctctctgttcgcttgagcgaacggctaaagacgatttctgggttgc 17506  T
Q  349 ttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgc-aaaacctac-ggtttcagac 430  Q
    |  | |||||| ||||||||| ||||| |  |||||||||||||| |||||| ||| | |||| ||||||||| ||||||||||    
T  17507 taacatgaatgttcgcttaagcgacgggtcgttcgcttaagcgactattcatatggattgtgcaaaaacctacgggtttcagac 17590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 6907 - 6988
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagc 198  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||| | ||||||||| | ||||| ||| |||||||||||    
T  6907 cttcgcttaagcgacggctagctcgcttaagcgaccggcttacagtaag-tctgggttctgctcgcttacgattcgcttgagc 6988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 442
Target Start/End: Original strand, 16338 - 16494
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgc 384  Q
    |||||||||||  | |||||||| |||||||||||| ||| |  ||||  | ||||||||||||||||||||||| ||||||||| ||||| |  |||||    
T  16338 ttttcgcttacaggctcgctcacagttcgcttaagcaaactgacaaaacagaattctgggcagcttgcttgaatgttcgcttaagcgacgggtcgttcgc 16437  T
Q  385 ttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||  |||||||||||||| || || || ||||||||||| |||| || |||||||||||    
T  16438 tt--gcgaccattcatctaggcagcgcaaaaacctacgggttcaaacctcttctcactc 16494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 16153 - 16247
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttg 195  Q
    |||||||||||||   ||||||||||||||||| ||| ||||||||| |||| |||||||| | |||  |||||| | ||||| ||||||||||||    
T  16153 ggctgactaaggtcatcttcgcttaagcgacggttagctcgcttaagcgaccggcttacagaaagtt-ggggttccgctcgctaacggttcgcttg 16247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 90 - 331
Target Start/End: Original strand, 116238 - 116478
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    |||| |||| |||||||||||||   ||||||||||||||||||| ||||||||||| |||| |||||||| ||  |  || ||  | ||||| ||||||    
T  116238 ttcaaaaaatggctgactaaggtcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacag-agagttgggatttcgctcgctaacggtt 116336  T
Q  190 cgcttgagcgaactttggacagaatg-aaaatggtttttcgctcacaaggtcgcttaccattcgcttaagcgaattcttggcagaaccaaacttaatttt 288  Q
    |||||||||||||||  ||||||||| |||||| ||||||||| ||  | ||||||||  |||||||  ||||| |||||||||||   || |  |||||    
T  116337 cgcttgagcgaacttctgacagaatgaaaaatgatttttcgcttacgggttcgcttacagttcgctt-ggcgaactcttggcagaatggaattatatttt 116435  T
Q  289 cgcttaccagttcgctcacggttcgcttaagcgaacgggtaaa 331  Q
    |||||||  | || ||||  |||||||| ||||||||| ||||    
T  116436 cgcttacaggctcactcatagttcgcttgagcgaacggctaaa 116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 415
Target Start/End: Complemental strand, 129146 - 129068
Alignment:
Q  337 attctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||  |||| |||||||||||||||||| ||||| |  |||||||||||||  ||||||||| | |||||||||    
T  129146 attctgggttgcttacttgaatgctcgcttaagcgacgggtcgttcgcttaagcgattattcatctgagcagtgcaaaa 129068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 129293 - 129206
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggttcgcttgagcgaactt 204  Q
    ||||||||||||||||||| | ||||||||| |||| ||| |||| | |||  |||||| | ||||| ||||||||||| |||||||||    
T  129293 cttcgcttaagcgacggctggctcgcttaagcgaccggctcacagaaagtt-ggggttccgctcgctaacggttcgcttaagcgaactt 129206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 427
Target Start/End: Original strand, 1334 - 1476
Alignment:
Q  285 ttttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgca-ttctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcg 383  Q
    ||||| ||||| |||||||||| ||||||||||||||||| |  | | ||  | |||||||  ||||||||||||||||||||||| ||||| |  ||||    
T  1334 ttttcacttacgagttcgctcatggttcgcttaagcgaactg--acattcataattctgggttgcttgcttgaatgctcgcttaagcgacgggtcgttcg 1431  T
Q  384 cttaagcgaccattcatctgggtagtgc-aaaacctacggtttca 427  Q
    ||||||||||||||||||| || ||||| ||||| ||||||||||    
T  1432 cttaagcgaccattcatctaggcagtgcaaaaacttacggtttca 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 51822 - 51890
Alignment:
Q  347 gcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||| |||||||||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||    
T  51822 gcttccttgaatgctcgcttaagcgacgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 51890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 51643 - 51682
Alignment:
Q  116 cttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  51643 cttcgcttaagcgacggctggctcgcttaagtgaccagct 51682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 121479 - 121547
Alignment:
Q  347 gcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||||||| |||||    |||||||||||||||||||||||||| |||||||||    
T  121479 gcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaa 121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 132356 - 132424
Alignment:
Q  347 gcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    ||||||||||||||||||||||| |||||    |||||||||||||||||||||||||| |||||||||    
T  132356 gcttgcttgaatgctcgcttaagcgacgggacattcgcttaagcgaccattcatctgggcagtgcaaaa 132424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 75 - 202
Target Start/End: Original strand, 30258 - 30383
Alignment:
Q  75 tgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttc 174  Q
    ||||| |||||| ||||||||||  |||||||||||| ||||||||||||||||| || | | ||||||||| |||| |||||||| | ||| | ||||     
T  30258 tgcacgaagcaa-aattcagaaagtggctgactaaggctcacttcgcttaagcgaaggttggctcgcttaagcgaccggcttacagaaagtt-taggttt 30355  T
Q  175 agttcgctcacggttcgcttgagcgaac 202  Q
     | |||||||||||||||||||| ||||    
T  30356 cgctcgctcacggttcgcttgagtgaac 30383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 30466 - 30528
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttcagacttcttctcactc 442  Q
    ||||||||||||||| ||||||||| || || ||||||||||| | ||||| |||||||||||    
T  30466 tcgcttaagcgaccactcatctgggcagggcaaaaacctacgggtccagacctcttctcactc 30528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 31243 - 31277
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  31243 tcaaaataaaataaaataacaactagggcgttaca 31277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 442
Target Start/End: Complemental strand, 11527 - 11390
Alignment:
Q  306 acggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctggg 405  Q
    ||||||||||||||||||||| ||||| |  ||||| ||  ||| ||||||||||||||||||| ||| | |   ||||| ||||||| | |||||||||    
T  11527 acggttcgcttaagcgaacggctaaaaacaaattctaggttgctagcttgaatgctcgcttaagcgacaggtagctcgctcaagcgacaactcatctggg 11428  T
Q  406 tagtg-caaaacctacggtttcagacttcttctcactc 442  Q
     || |  |||||||||| |||||||||||| |||||||    
T  11427 cagggtaaaaacctacgatttcagacttctcctcactc 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 11692 - 11627
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    |||||| | ||||||||||||| |||  |||||||||||| || ||||||||||||| ||||||||    
T  11692 ttcagatagaggctgactaaggctcagctcgcttaagcgaagggtagttcgcttaagcgaccagct 11627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 3965 - 3904
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagt 161  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| |||| |||||||||    
T  3965 ggctgactaaggtcaacttcgcttaagcgacgtctagttcgcttaagcgaccggcttacagt 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 2794 - 2760
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  2794 tcaaaataaaataaaataacaactagggcgttaca 2760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 415
Target Start/End: Original strand, 1645 - 1713
Alignment:
Q  347 gcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||| |||||||||||||||||| |||||    |||||||||||||||||||||||||| |||||||||    
T  1645 gcttacttgaatgctcgcttaagcgacgggacgttcgcttaagcgaccattcatctgggcagtgcaaaa 1713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 65487 - 65547
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    |||||||||||||   || |||||||| ||||||| ||||||||||| |||| ||||||||    
T  65487 ggctgactaaggtcttctccgcttaagtgacggctggttcgcttaagcgaccggcttacag 65547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 65662 - 65694
Alignment:
Q  337 attctgggcagcttgcttgaatgctcgcttaag 369  Q
    |||||||| ||||||||||||||||||||||||    
T  65662 attctgggaagcttgcttgaatgctcgcttaag 65694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 493711 - 493647
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagc 154  Q
    |||||||||||||||||||||| ||| ||||||||||||| || ||| ||||||||| |||||||    
T  493711 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtagctcgcttaagcgaccagc 493647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 525332 - 525409
Alignment:
Q  338 ttctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||||||  ||||||||||||||||| | ||| || || |  ||||||||||||||||||||||| || |||||||||    
T  525332 ttctgggttgcttgcttgaatgctcgttcaagcgatgggtcgttcgcttaagcgaccattcatctcggcagtgcaaaa 525409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 11235 - 11132
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacggtt 189  Q
    |||||||||||||||||||||| ||| ||||||||||||| || ||  ||||||||| |||||||| |||  ||||| ||| |   | ||||||||||||    
T  11235 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaagggtatctcgcttaagcgaccagctcacaaaaggttgtggttctcgctcgctcacggtt 11136  T
Q  190 cgct 193  Q
    ||||    
T  11135 cgct 11132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 195
Target Start/End: Original strand, 17537 - 17643
Alignment:
Q  88 aattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacagtaggttctgggttcagttcgctcacgg 187  Q
    ||||||||||  ||||||| |||| ||||||||||||||||| |||| | ||||||||| |||| |||||||| | ||| ||||||  | |||||||| |    
T  17537 aattcagaaagtggctgaccaaggctcacttcgcttaagcgaaggctggctcgcttaagcgaccggcttacagaaagtt-tgggtttcgctcgctcacag 17635  T
Q  188 ttcgcttg 195  Q
    ||||||||    
T  17636 ttcgcttg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 430
Target Start/End: Original strand, 17750 - 17829
Alignment:
Q  351 gcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaacctacggtttcagac 430  Q
    ||||||||||| ||||||| ||||| |   ||||||||||||||||||||||||| ||   ||||| ||||| |||||||    
T  17750 gcttgaatgcttgcttaagcgacgggtagctcgcttaagcgaccattcatctgggcaggcaaaaacttacgggttcagac 17829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 442
Target Start/End: Original strand, 875 - 1030
Alignment:
Q  287 ttcgcttaccagttcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtga-cggatgcttcgct 385  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||  |  ||||||||||||     |||  | ||||||||| ||  ||||| ||||||    
T  875 ttcgcttac-agttcgctcacggttcgcttaagcgaacggctaaaggcaaattctgggcagcgactatgatagttcgcttaagcgatgggatg-ttcgct 972  T
Q  386 taagcgaccattcatctgggtagtg-caaaacctacggtttcagacttcttctcactc 442  Q
    |||||||| | ||||||||| || |  |||||||||| |||||||||||| |||||||    
T  973 taagcgactactcatctgggcagggtaaaaacctacgatttcagacttctcctcactc 1030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 3114 - 3037
Alignment:
Q  338 ttctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtagtgcaaaa 415  Q
    |||||||  |||||||||||||| |||| ||| || || |  |||||||||||||||||||||||||| |||||||||    
T  3114 ttctgggttgcttgcttgaatgcgcgctcaagcgatgggtcgttcgcttaagcgaccattcatctgggcagtgcaaaa 3037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 738 - 798
Alignment:
Q  100 ggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagcttacag 160  Q
    |||||||||||||   ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  738 ggctgactaaggtcatcttcgcttaagcgacggctggttcgcttaagcgaccggcttacag 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 974 - 1006
Alignment:
Q  337 attctgggcagcttgcttgaatgctcgcttaag 369  Q
    |||||||| ||||||||||||||||||||||||    
T  974 attctgggtagcttgcttgaatgctcgcttaag 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 18060 - 18124
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagc 154  Q
    |||||||||||||||||||||| ||| |||||||||||||  | ||| ||||||||| |||||||    
T  18060 ttcagaaaaaggctgactaaggctcagttcgcttaagcgaaaggtagctcgcttaagcgaccagc 18124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 1094 - 1128
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||||||||||||||||||    
T  1094 tcaaaataaaataaaataataactagggcgttaca 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 38995 - 38961
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||||||    
T  38995 attaagacttaatgatgatgttaattataatctgt 38961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 52148 - 52114
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||||||    
T  52148 attaagacttaatgatgatgttaattataatctgt 52114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 478
Target Start/End: Original strand, 201 - 236
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttacat 478  Q
    |||||||||||||||||||| |||||||||||||||    
T  201 tcaaaataaaataaaataatgactagggcgttacat 236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 3943 - 3878
Alignment:
Q  90 ttcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    |||| ||||||||||||||| | ||| ||||||||||||| || ||| ||||||||| ||||||||    
T  3943 ttcaaaaaaaggctgactaatgctcagttcgcttaagcgaagggtagctcgcttaagcgaccagct 3878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 300 - 405
Target Start/End: Original strand, 532 - 637
Alignment:
Q  300 tcgctcacggttcgcttaagcgaacgggtaaaatcgcattctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattca 399  Q
    |||||||||||| |||||||||||||||||||  |  ||||||||||||     |||  ||||||||||| || ||  | |||||||||||||||| |||    
T  532 tcgctcacggttagcttaagcgaacgggtaaaggcaaattctgggcagcgattatgatagctcgcttaagcgatgggaggttcgcttaagcgaccactca 631  T
Q  400 tctggg 405  Q
    ||||||    
T  632 tctggg 637  T

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Target: scaffold0305 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 20639 - 20604
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20639 cattaagacttaatgatgatgttaactataatctgt 20604  T

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Target: scaffold0232 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 427
Target Start/End: Complemental strand, 18874 - 18827
Alignment:
Q  381 tcgcttaagcgaccattcatctgggtagtgc-aaaacctacggtttca 427  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  18874 tcgcttaagcgaccattcatctgggcagtgcaaaaacttacggtttca 18827  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Complemental strand, 13447 - 13416
Alignment:
Q  476 cattaagacttaatgatgatgttaattataat 507  Q
    ||||||||||||||||||||||||||||||||    
T  13447 cattaagacttaatgatgatgttaattataat 13416  T

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Target: scaffold0169 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 6537 - 6604
Alignment:
Q  338 ttctgggcagcttgcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctggg 405  Q
    |||||||  |||| ||||||||||| || ||| ||||| |  ||||||||||||||||||||||||||    
T  6537 ttctgggttgctttcttgaatgctcactcaagcgacgggtcgttcgcttaagcgaccattcatctggg 6604  T

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Target: scaffold0034 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 72633 - 72719
Alignment:
Q  68 cccctcatgcactaagcaacaattcagaaaaaggctgactaaggttcacttcgcttaagcgacggctagttcgcttaagtgaccagct 155  Q
    ||||| |||||| |||||| ||||||||||  ||||||||| || |||  |||||||||||| || ||| ||||||||| ||||||||    
T  72633 cccctaatgcacgaagcaaaaattcagaaagtggctgacta-ggctcagctcgcttaagcgaagggtagctcgcttaagcgaccagct 72719  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 124821 - 124786
Alignment:
Q  476 cattaagacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||| |||||||||||||||||||    
T  124821 cattaagacttaatgaggatgttaattataatctgt 124786  T

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Target: scaffold1890 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1890
Description:

Target: scaffold1890; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 116 - 150
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    ||||||||||||||||||| |||||||||||||||    
T  116 tcaaaataaaataaaataacaactagggcgttaca 150  T

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Target: scaffold0647 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 506
Target Start/End: Original strand, 6006 - 6036
Alignment:
Q  476 cattaagacttaatgatgatgttaattataa 506  Q
    |||||||||||||||||||||||||||||||    
T  6006 cattaagacttaatgatgatgttaattataa 6036  T

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Target: scaffold0639 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 8710 - 8676
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||||||||||||||| |||||||    
T  8710 attaagacttaatgatgatgttaattacaatctgt 8676  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 17873 - 17907
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  17873 attaagacttaatgaggatgttaattataatctgt 17907  T

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Target: scaffold0228 (Bit Score: 31; Significance: 0.00000005; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 4738 - 4708
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  4738 agacttaatgatgatgttaattataatctgt 4708  T

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Target: scaffold0228; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 12320 - 12290
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  12320 agacttaatgatgatgttaattataatctgt 12290  T

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Target: scaffold0228; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 22272 - 22242
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  22272 agacttaatgatgatgttaattataatctgt 22242  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 443 - 477
Target Start/End: Original strand, 1926 - 1960
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttaca 477  Q
    |||||||||||||||||||| ||||||||||||||    
T  1926 tcaaaataaaataaaataatgactagggcgttaca 1960  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 511
Target Start/End: Complemental strand, 40143 - 40113
Alignment:
Q  481 agacttaatgatgatgttaattataatctgt 511  Q
    |||||||||||||||||||||||||||||||    
T  40143 agacttaatgatgatgttaattataatctgt 40113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Complemental strand, 2086 - 2052
Alignment:
Q  477 attaagacttaatgatgatgttaattataatctgt 511  Q
    ||||||||||||||| |||||||||||||||||||    
T  2086 attaagacttaatgaggatgttaattataatctgt 2052  T

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Target: scaffold1461 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 1763 - 1706
Alignment:
Q  351 gcttgaatgctcgcttaagtgacggatgcttcgcttaagcgaccattcatctgggtag 408  Q
    |||||||| |||||||||| ||||| |   ||||||||||||||| ||||||||||||    
T  1763 gcttgaatactcgcttaagcgacgggtagctcgcttaagcgaccactcatctgggtag 1706  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 474
Target Start/End: Complemental strand, 22555 - 22526
Alignment:
Q  445 aaaataaaataaaataataactagggcgtt 474  Q
    ||||||||||||||||||||||||||||||    
T  22555 aaaataaaataaaataataactagggcgtt 22526  T

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Target: scaffold0359 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 1002 - 1042
Alignment:
Q  282 taattttcgcttaccagttcgctcacggttcgcttaagcga 322  Q
    ||||||||||||||||| |||||||| | ||||||||||||    
T  1002 taattttcgcttaccagctcgctcaccggtcgcttaagcga 1042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 477 - 509
Target Start/End: Complemental strand, 3705 - 3673
Alignment:
Q  477 attaagacttaatgatgatgttaattataatct 509  Q
    ||||||||||||||| |||||||||||||||||    
T  3705 attaagacttaatgaggatgttaattataatct 3673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 509
Target Start/End: Original strand, 25955 - 25983
Alignment:
Q  481 agacttaatgatgatgttaattataatct 509  Q
    |||||||||||||||||||||||||||||    
T  25955 agacttaatgatgatgttaattataatct 25983  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 479
Target Start/End: Original strand, 673 - 709
Alignment:
Q  443 tcaaaataaaataaaataataactagggcgttacatt 479  Q
    ||||||||||||||||||| | |||||||||||||||    
T  673 tcaaaataaaataaaataacagctagggcgttacatt 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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