View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6289_high_2 (Length: 632)

Name: NF6289_high_2
Description: NF6289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6289_high_2
NF6289_high_2
[»] chr7 (44 HSPs)
chr7 (78-359)||(7345911-7346193)
chr7 (76-359)||(48755385-48755669)
chr7 (79-205)||(38001502-38001629)
chr7 (90-205)||(33341307-33341423)
chr7 (78-205)||(34557394-34557522)
chr7 (78-205)||(35480205-35480332)
chr7 (76-205)||(34558292-34558422)
chr7 (78-205)||(41616621-41616749)
chr7 (78-152)||(7347265-7347339)
chr7 (78-187)||(41126236-41126346)
chr7 (76-152)||(43935180-43935256)
chr7 (76-205)||(2903039-2903169)
chr7 (305-359)||(34557551-34557605)
chr7 (305-359)||(34558209-34558263)
chr7 (301-359)||(36672964-36673022)
chr7 (78-187)||(36673845-36673955)
chr7 (305-359)||(38002422-38002476)
chr7 (90-159)||(13446388-13446457)
chr7 (78-205)||(41127162-41127290)
chr7 (293-359)||(38001647-38001711)
chr7 (301-351)||(41127087-41127137)
chr7 (78-187)||(41618508-41618618)
chr7 (306-359)||(33341781-33341834)
chr7 (78-205)||(38002505-38002633)
chr7 (89-152)||(19848879-19848942)
chr7 (305-348)||(33341452-33341495)
chr7 (78-152)||(18801212-18801286)
chr7 (90-152)||(35088007-35088069)
chr7 (78-152)||(36702774-36702848)
chr7 (78-152)||(43936185-43936259)
chr7 (78-126)||(18670574-18670622)
chr7 (76-152)||(30224021-30224097)
chr7 (305-348)||(2903198-2903241)
chr7 (78-152)||(1884237-1884311)
chr7 (90-152)||(17288265-17288327)
chr7 (90-152)||(19278362-19278424)
chr7 (78-187)||(30222643-30222753)
chr7 (305-359)||(41616778-41616832)
chr7 (79-157)||(45089470-45089547)
chr7 (100-158)||(48754015-48754073)
chr7 (79-152)||(1904065-1904138)
chr7 (78-111)||(6773476-6773509)
chr7 (90-151)||(33458319-33458380)
chr7 (79-152)||(47163151-47163224)
[»] chr3 (63 HSPs)
chr3 (78-359)||(7821822-7822105)
chr3 (76-359)||(35633222-35633506)
chr3 (78-205)||(11482978-11483106)
chr3 (90-200)||(40502211-40502322)
chr3 (78-205)||(52292591-52292719)
chr3 (90-205)||(1301041-1301157)
chr3 (78-205)||(52705299-52705427)
chr3 (78-205)||(55443541-55443669)
chr3 (79-205)||(5416196-5416323)
chr3 (79-205)||(55442592-55442719)
chr3 (78-205)||(32974214-32974342)
chr3 (78-205)||(53047894-53048022)
chr3 (78-205)||(53342713-53342841)
chr3 (76-205)||(35835810-35835940)
chr3 (76-205)||(35892527-35892657)
chr3 (301-359)||(52705216-52705274)
chr3 (78-202)||(7583467-7583592)
chr3 (90-205)||(5417039-5417155)
chr3 (78-205)||(46446366-46446494)
chr3 (78-205)||(48035315-48035443)
chr3 (300-359)||(11482050-11482109)
chr3 (305-359)||(32974131-32974185)
chr3 (305-359)||(48035232-48035286)
chr3 (301-359)||(52292744-52292802)
chr3 (90-187)||(53049046-53049144)
chr3 (293-359)||(53346922-53346987)
chr3 (293-359)||(55443458-55443523)
chr3 (78-184)||(19579306-19579413)
chr3 (305-359)||(7583622-7583676)
chr3 (305-359)||(40501962-40502016)
chr3 (78-152)||(47855383-47855457)
chr3 (305-359)||(55442748-55442802)
chr3 (79-152)||(11219428-11219501)
chr3 (91-187)||(39287480-39287577)
chr3 (78-186)||(39288449-39288558)
chr3 (79-187)||(52293532-52293641)
chr3 (89-157)||(32979096-32979164)
chr3 (135-205)||(11481955-11482026)
chr3 (95-205)||(40501822-40501933)
chr3 (305-359)||(5416956-5417010)
chr3 (78-152)||(7820387-7820461)
chr3 (78-152)||(11220703-11220777)
chr3 (78-152)||(19579217-19579291)
chr3 (78-152)||(32973136-32973210)
chr3 (305-359)||(35835727-35835781)
chr3 (305-359)||(35892444-35892498)
chr3 (317-359)||(53048061-53048103)
chr3 (305-351)||(53342870-53342916)
chr3 (90-152)||(54654011-54654073)
chr3 (314-359)||(5416361-5416406)
chr3 (90-186)||(48825821-48825918)
chr3 (97-153)||(39190768-39190824)
chr3 (97-152)||(48034025-48034080)
chr3 (89-152)||(48252941-48253004)
chr3 (301-359)||(48826690-48826746)
chr3 (90-152)||(8372661-8372723)
chr3 (90-152)||(29536723-29536785)
chr3 (90-152)||(33563958-33564020)
chr3 (131-223)||(39133067-39133160)
chr3 (90-152)||(43101903-43101965)
chr3 (94-152)||(47808151-47808209)
chr3 (90-152)||(49122047-49122109)
chr3 (78-111)||(23886113-23886146)
[»] chr8 (18 HSPs)
chr8 (76-359)||(45384235-45384519)
chr8 (156-359)||(38664445-38664649)
chr8 (78-205)||(6844564-6844692)
chr8 (311-359)||(6844481-6844529)
chr8 (78-158)||(45385833-45385913)
chr8 (91-153)||(14820203-14820265)
chr8 (78-152)||(24068327-24068401)
chr8 (79-152)||(3612628-3612701)
chr8 (79-152)||(6843753-6843826)
chr8 (90-150)||(36756073-36756133)
chr8 (76-115)||(13360348-13360387)
chr8 (78-157)||(16363852-16363931)
chr8 (78-157)||(29441613-29441692)
chr8 (90-152)||(37274896-37274958)
chr8 (79-152)||(19913490-19913563)
chr8 (78-126)||(7565357-7565405)
chr8 (78-126)||(15989001-15989049)
chr8 (78-126)||(24706283-24706331)
[»] chr4 (46 HSPs)
chr4 (78-351)||(15445433-15445707)
chr4 (90-206)||(44690845-44690962)
chr4 (221-359)||(53401318-53401457)
chr4 (90-205)||(52881921-52882037)
chr4 (305-359)||(19049029-19049083)
chr4 (78-205)||(52880810-52880939)
chr4 (156-359)||(53151411-53151613)
chr4 (301-359)||(937021-937079)
chr4 (305-359)||(12391776-12391830)
chr4 (78-152)||(53400182-53400256)
chr4 (90-205)||(2309853-2309969)
chr4 (90-205)||(30671003-30671119)
chr4 (79-205)||(2310773-2310900)
chr4 (293-359)||(2310690-2310755)
chr4 (305-359)||(19049807-19049861)
chr4 (90-152)||(31711101-31711163)
chr4 (301-359)||(44690763-44690821)
chr4 (78-152)||(53401496-53401570)
chr4 (305-350)||(52881847-52881892)
chr4 (90-189)||(936225-936325)
chr4 (78-169)||(937125-937217)
chr4 (305-359)||(2309998-2310052)
chr4 (78-152)||(15446715-15446789)
chr4 (90-152)||(28103531-28103593)
chr4 (78-187)||(29833369-29833479)
chr4 (78-152)||(30682717-30682791)
chr4 (90-152)||(38553938-38554000)
chr4 (90-152)||(40146668-40146730)
chr4 (90-186)||(19049882-19049979)
chr4 (79-152)||(47667177-47667249)
chr4 (305-350)||(52880968-52881013)
chr4 (78-126)||(44655718-44655766)
chr4 (78-126)||(44664397-44664445)
chr4 (304-359)||(30671147-30671202)
chr4 (90-152)||(12396919-12396981)
chr4 (90-152)||(26393172-26393234)
chr4 (90-152)||(27408772-27408834)
chr4 (78-152)||(30672109-30672183)
chr4 (183-272)||(38555199-38555289)
chr4 (90-152)||(46796071-46796133)
chr4 (78-152)||(48207762-48207836)
chr4 (78-111)||(8516938-8516971)
chr4 (156-205)||(19048951-19049000)
chr4 (79-152)||(28370686-28370759)
chr4 (78-111)||(43895683-43895716)
chr4 (89-157)||(44302728-44302796)
[»] chr5 (27 HSPs)
chr5 (132-330)||(11443479-11443678)
chr5 (89-205)||(32521694-32521811)
chr5 (76-152)||(15613500-15613576)
chr5 (301-359)||(22650536-22650594)
chr5 (78-205)||(4567965-4568093)
chr5 (79-206)||(15509193-15509321)
chr5 (90-205)||(20991640-20991756)
chr5 (79-197)||(4566949-4567068)
chr5 (131-205)||(22650619-22650694)
chr5 (305-359)||(15509349-15509403)
chr5 (78-187)||(20988687-20988797)
chr5 (305-351)||(20989565-20989611)
chr5 (305-359)||(32521871-32521925)
chr5 (305-359)||(4567882-4567936)
chr5 (78-152)||(42980754-42980828)
chr5 (78-126)||(32415256-32415304)
chr5 (78-152)||(5061025-5061099)
chr5 (90-152)||(7345435-7345497)
chr5 (78-152)||(15153874-15153948)
chr5 (90-152)||(15615005-15615067)
chr5 (79-192)||(32521926-32522040)
chr5 (200-272)||(223346-223419)
chr5 (79-152)||(12938676-12938749)
chr5 (79-111)||(641688-641720)
chr5 (76-152)||(1273084-1273160)
chr5 (78-126)||(1982709-1982757)
chr5 (90-150)||(18693707-18693767)
[»] chr2 (30 HSPs)
chr2 (90-205)||(33837746-33837862)
chr2 (94-205)||(4630075-4630187)
chr2 (78-205)||(3254853-3254981)
chr2 (78-205)||(4628879-4629007)
chr2 (90-205)||(3666259-3666375)
chr2 (90-205)||(41313258-41313374)
chr2 (78-152)||(12854149-12854223)
chr2 (301-359)||(33837663-33837721)
chr2 (310-359)||(5994176-5994225)
chr2 (305-359)||(2306569-2306623)
chr2 (305-359)||(3255000-3255054)
chr2 (78-152)||(6706923-6706997)
chr2 (541-609)||(5993955-5994024)
chr2 (78-187)||(2305537-2305647)
chr2 (305-359)||(3255786-3255840)
chr2 (305-359)||(4629992-4630046)
chr2 (90-152)||(7038377-7038439)
chr2 (78-152)||(12852883-12852957)
chr2 (78-189)||(3665221-3665333)
chr2 (89-152)||(10477350-10477413)
chr2 (78-187)||(2306670-2306779)
chr2 (94-203)||(3255871-3255981)
chr2 (78-152)||(5564056-5564130)
chr2 (78-152)||(5565190-5565264)
chr2 (78-152)||(14482136-14482210)
chr2 (78-187)||(41312497-41312607)
chr2 (78-151)||(14573854-14573927)
chr2 (90-153)||(10367248-10367311)
chr2 (78-126)||(27657818-27657866)
chr2 (76-152)||(28109914-28109990)
[»] chr1 (50 HSPs)
chr1 (195-359)||(42246006-42246170)
chr1 (90-205)||(14312784-14312900)
chr1 (92-205)||(9119813-9119927)
chr1 (78-187)||(2237987-2238097)
chr1 (78-152)||(20953285-20953359)
chr1 (78-202)||(1873848-1873973)
chr1 (78-205)||(2236810-2236938)
chr1 (78-205)||(9123390-9123518)
chr1 (76-152)||(26056192-26056268)
chr1 (78-205)||(35683052-35683180)
chr1 (300-359)||(1873086-1873145)
chr1 (305-359)||(1873762-1873816)
chr1 (293-359)||(2236956-2237021)
chr1 (305-359)||(48934395-48934449)
chr1 (79-187)||(34531661-34531770)
chr1 (79-152)||(50679866-50679939)
chr1 (78-205)||(1061443-1061571)
chr1 (311-359)||(9119962-9120010)
chr1 (78-205)||(34532693-34532821)
chr1 (78-184)||(1061325-1061432)
chr1 (90-157)||(42244513-42244580)
chr1 (95-205)||(48934255-48934366)
chr1 (76-166)||(52741483-52741574)
chr1 (78-189)||(48935117-48935229)
chr1 (78-185)||(48973195-48973303)
chr1 (311-359)||(48974330-48974377)
chr1 (78-169)||(48974433-48974525)
chr1 (90-157)||(3978053-3978120)
chr1 (316-359)||(35683210-35683253)
chr1 (90-152)||(3979358-3979420)
chr1 (78-152)||(14390255-14390329)
chr1 (78-152)||(33941314-33941388)
chr1 (78-187)||(35684212-35684321)
chr1 (90-205)||(1872946-1873062)
chr1 (78-126)||(33850299-33850347)
chr1 (78-126)||(33943631-33943679)
chr1 (312-359)||(9123307-9123354)
chr1 (89-152)||(51424259-51424322)
chr1 (90-124)||(13568518-13568552)
chr1 (90-152)||(13930720-13930782)
chr1 (94-223)||(14169632-14169762)
chr1 (78-152)||(32823455-32823529)
chr1 (94-152)||(40135382-40135440)
chr1 (90-152)||(42248350-42248412)
chr1 (90-152)||(49139810-49139872)
chr1 (79-152)||(1898002-1898075)
chr1 (79-152)||(9633773-9633846)
chr1 (76-157)||(39193576-39193657)
chr1 (78-126)||(29001193-29001241)
chr1 (311-359)||(34532610-34532658)
[»] chr6 (19 HSPs)
chr6 (78-205)||(13173034-13173161)
chr6 (78-205)||(19367714-19367842)
chr6 (90-205)||(26584028-26584144)
chr6 (90-197)||(2138636-2138744)
chr6 (78-205)||(8447218-8447346)
chr6 (78-205)||(8456022-8456150)
chr6 (90-205)||(26581962-26582077)
chr6 (76-206)||(28225419-28225550)
chr6 (78-183)||(19368531-19368637)
chr6 (305-359)||(26583945-26583999)
chr6 (305-359)||(28226326-28226380)
chr6 (90-157)||(27438799-27438866)
chr6 (305-359)||(28225576-28225630)
chr6 (89-205)||(28226409-28226526)
chr6 (90-205)||(13176324-13176440)
chr6 (305-359)||(8447375-8447429)
chr6 (305-359)||(8456179-8456233)
chr6 (305-359)||(26582106-26582160)
chr6 (92-152)||(9927617-9927677)
[»] scaffold0155 (2 HSPs)
scaffold0155 (78-205)||(5166-5294)
scaffold0155 (305-359)||(5323-5377)
[»] scaffold1827 (2 HSPs)
scaffold1827 (78-205)||(1050-1177)
scaffold1827 (305-359)||(968-1022)
[»] scaffold0038 (4 HSPs)
scaffold0038 (76-206)||(25917-26048)
scaffold0038 (305-359)||(26824-26878)
scaffold0038 (305-359)||(26074-26128)
scaffold0038 (89-205)||(26907-27024)
[»] scaffold0003 (1 HSPs)
scaffold0003 (90-157)||(48496-48563)
[»] scaffold0177 (1 HSPs)
scaffold0177 (78-187)||(1752-1862)
[»] scaffold0649 (1 HSPs)
scaffold0649 (78-112)||(3993-4027)
[»] scaffold0025 (1 HSPs)
scaffold0025 (76-152)||(56745-56821)


Alignment Details
Target: chr7 (Bit Score: 128; Significance: 7e-66; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 78 - 359
Target Start/End: Original strand, 7345911 - 7346193
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||   |||| |||||| ||||| |||||  ||| |||| |||||||| ||||     
T  7345911 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcccataaatataaactgtcttaatttggtcccttatttcttttgtcgttac 7346010  T
Q  177 ctcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaattttttaattttagt 276  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||      
T  7346011 ctcttttggtcctatccgttacattttaatcataaatgtctaaggtgtaacagcattgcaggtggtctaccatagacctattaaattttttaattttaac 7346110  T
Q  277 tgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||         ||||||||||||||||| ||| ||||||| |||||||   |||||||||| ||||||| ||||||||    
T  7346111 tgtttgatctttttttcaaatagaaaatcgttggatcttgtaggtctattgtaacatacggtgaataattaacatctaatttt 7346193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 76 - 359
Target Start/End: Complemental strand, 48755669 - 48755385
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgtt 174  Q
    ||||||||| || |||||||||||||||||||||||  || | ||||||||  |||||||||||| ||||||||||| |||| |||||| |||||  |||    
T  48755669 gacttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatttgatcccttatgttttttgccgtt 48755570  T
Q  175 aactcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaattttttaatttta 274  Q
    | || |||||||| |||| |||||||||||| ||||||| |||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||    
T  48755569 acctattttggtcctatccgttacattttaaccataaatatctaaggtgtaacaacattgcaggtggtctaccatagatctattaaattttttaatttta 48755470  T
Q  275 gttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
      |||| ||         ||||  ||||| | ||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  48755469 actgttcgatatttttttcaaaatgaaaaccattgaatcatgtaggtctattataggctacggtaaatgattaacacctaatttt 48755385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 38001502 - 38001629
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| || ||||||||||||||||||||||   || | ||||||||  | |||||||||||||| |||||||  ||| ||||||||||||| |||| |    
T  38001502 ttaatacatgctttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatc 38001601  T
Q  178 tcttttggtcatatctgttacattttaa 205  Q
    ||||||||||||||||||||||||||||    
T  38001602 tcttttggtcatatctgttacattttaa 38001629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 33341307 - 33341423
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||| |||||||||||||| ||| |||||||||| | ||||||||||| |||||||||||  ||| ||||||||||||  |||| |||||||||||     
T  33341307 tttggtctcttaacttatttttggattttattttggtctcataactataaattgtctcaatttggtccattatgtcttttgccgttacctcttttggtcc 33341406  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  33341407 tatccgttacattttaa 33341423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 34557394 - 34557522
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||| ||||||||||||||  ||| ||||||||||    ||||||||||||||||||||||  ||| ||||||||||||  ||| |    
T  34557394 cttaatacatgctttggttccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttta 34557493  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
     ||||||||||||||| ||||||||||||    
T  34557494 ttcttttggtcatatccgttacattttaa 34557522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 35480205 - 35480332
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||| ||| ||||||||||||  ||||     
T  35480205 cttaatacatgctttggtcccttaacttattttcggatttcattttggtccc-taactataaagtgtctcaatttagtcccttatgtcttttgccgttac 35480303  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  35480304 ctcttttggtcctatcggttacattttaa 35480332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 34558422 - 34558292
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgtt 174  Q
    ||||||||| || ||||||||||||||||||||||  ||| | ||||||||    |||||||||||| |||||||||  ||| ||||||||||||  |||    
T  34558422 gacttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcccttatgtcttttgccgtt 34558323  T
Q  175 aactcttttggtcatatctgttacattttaa 205  Q
    | ||||||||||| |||| ||||||||||||    
T  34558322 acctcttttggtcctatccgttacattttaa 34558292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 41616621 - 41616749
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||| ||||     
T  41616621 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttat 41616720  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||| || ||||  |||||||||||    
T  41616721 ctcttttgatcctatcctttacattttaa 41616749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 7347339 - 7347265
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||| |||||||| |||||||||||  |||| ||||||||||||||||||    
T  7347339 cttaatacatgctttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaattt 7347265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 41126236 - 41126346
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||||||||||||||||| |||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||| ||||     
T  41126236 cttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttac 41126335  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  41126336 ctcttttggtc 41126346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 43935180 - 43935256
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| || ||||||||||||||||||||||| ||| | ||||||||  | ||||||||||||||||||||||    
T  43935180 gacttaatatatgctttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaattt 43935256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 76 - 205
Target Start/End: Original strand, 2903039 - 2903169
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgtt 174  Q
    ||||||||| || ||||||| ||||||||||||||  ||| | |||||| |||  ||||||||||||||||||||||  | |||||||||||||    ||    
T  2903039 gacttaatacatgctttggtaccttaacttattttcggatttcattttgatttcctaactataaagtgtctcaatttggtcccttatgtctttttccatt 2903138  T
Q  175 aactcttttggtcatatctgttacattttaa 205  Q
    | || |||||||| |||| ||||||||||||    
T  2903139 accttttttggtcctatccgttacattttaa 2903169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 34557551 - 34557605
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  34557551 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 34557605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 34558263 - 34558209
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  34558263 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 34558209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 36672964 - 36673022
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  36672964 aaatcgttggatcatgtaggtttattgtagcctacggtgaatgactaacacctgatttt 36673022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 36673955 - 36673845
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| ||||||||||    |||||||||| |||||||||||  | ||||||||||| ||| ||||     
T  36673955 cttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttac 36673856  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  36673855 ctcttttggtc 36673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 38002476 - 38002422
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  38002476 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 38002422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 13446388 - 13446457
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcctt 159  Q
    |||||||| |||||||||||||  || ||||||||||| | ||||||||||||||||||||||| |||||    
T  13446388 tttggtcctttaacttatttttgaattttattttggttctctaactataaagtgtctcaatttagtcctt 13446457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 41127290 - 41127162
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcctt-atgtcttttgttgttaa 176  Q
    ||||||| || ||||| ||||||||||||||||  ||| | ||||||||    |||||||||||| |||||||||  ||||| ||||||||||  ||||     
T  41127290 cttaatacatgctttgatcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtcctttatgtcttttgccgttac 41127191  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
     |||||||||| |||| ||||||||||||    
T  41127190 atcttttggtcctatccgttacattttaa 41127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 38001647 - 38001711
Alignment:
Q  293 caaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||  ||||| ||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  38001647 caaatagaaa--cgttggatcatgtcggtttattgtagcctacggtgaatgattaacacctgatttt 38001711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 351
Target Start/End: Complemental strand, 41127137 - 41127087
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacac 351  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||||||||    
T  41127137 aaatcgttggatcatgtaggtgtattgtagcctacggtgaatgattaacac 41127087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 41618618 - 41618508
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    ||| |||||||||||| |||||  ||| ||||||||| ||| ||||     
T  41618618 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttac 41618519  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  41618518 ctcttttggtc 41618508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 33341834 - 33341781
Alignment:
Q  306 gttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||| |||||||||||||||||||||||| ||||||||||||||| || |||||    
T  33341834 gttggatcatgtaggtttattgtagtctatggtgaatgattaacatctgatttt 33341781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 38002633 - 38002505
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||| ||||||||||||| |||| | ||||||||    ||||||||||||||||||||||  | |||||| | ||| || |||      
T  38002633 cttaatacatgctttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtcccttatctttttggtcgtttc 38002534  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| ||||  |||||||||||    
T  38002533 ctcttttggtcctatccattacattttaa 38002505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 19848942 - 19848879
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  19848942 ctttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaattt 19848879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 33341452 - 33341495
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaa 348  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  33341452 cgttggatcatgtaggtttattgtagcctacggtgaatgattaa 33341495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 18801212 - 18801286
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | ||||||||    ||||||||||||||||||||||    
T  18801212 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaattt 18801286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 35088069 - 35088007
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||||||||||||  || |||||||||| || ||||| |||| |||||||||||    
T  35088069 tttggtcccttaacttatttttgaattttattttggtcttttaactttaaactgtctcaattt 35088007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 36702774 - 36702848
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||||||| | ||||||||    ||||| |||| |||||||||||    
T  36702774 cttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaattt 36702848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 43936259 - 43936185
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| ||| |||||||||||||||||||||| ||| | ||||||||  | |||||||||||| ||| |||||    
T  43936259 cttaatatatagtttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaattt 43936185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 18670622 - 18670574
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  18670622 cttaatacatcctttggtcccttaacttatttttggattttattttggt 18670574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 30224097 - 30224021
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| || ||||||||||||||||||||||  ||| | ||||||||    |||||||||| |||||||||||    
T  30224097 gacttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaattt 30224021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 2903198 - 2903241
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaa 348  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||    
T  2903198 cgttggatcatgtaggtttattgtagcctacgatgaatgattaa 2903241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 1884237 - 1884311
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || ||||||||||    ||| |||||| |||||||||||    
T  1884237 cttaatacatgctttggtcccttaacttatttttgaattttattttggtcccttaattataaaatgtctcaattt 1884311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 17288327 - 17288265
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | | | ||||||||    ||||||||||||||||||||||    
T  17288327 tttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaattt 17288265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 19278362 - 19278424
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||||||    ||| ||||||||||||||||||    
T  19278362 tttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaattt 19278424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 30222643 - 30222753
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||| |||| |||||||| ||| | ||||||||    ||| |||||||| |||||||||  ||| ||||||||| ||| ||||     
T  30222643 cttaatacatgctttggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttac 30222742  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  30222743 ctcttttggtc 30222753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 41616778 - 41616832
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||||| |||||||  ||||||| |||||||||||||| |||||    
T  41616778 cgttggatcatgtaggtgtattgtatcctacggtaaatgattaacacctgatttt 41616832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 45089470 - 45089547
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    |||||| || |||| |||||||||||||||||| | | | ||||||||  | || ||||||||||||||||||||||||    
T  45089470 ttaataaatgctttcgtcccttaacttatttttggttttcattttggtcctcta-ctataaagtgtctcaatttaatcc 45089547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 48754015 - 48754073
Alignment:
Q  100 taacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcct 158  Q
    |||||||||||||||| ||||||||||   |||| |||||||||| |||||||| ||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcct 48754073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 1904138 - 1904065
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || ||||||||||||||||||||||| ||| | | |||||| |  ||||| |||| |||||||||||    
T  1904138 ttaatacatgctttggtcccttaacttatttttggatttcaatttggtctcctaactttaaactgtctcaattt 1904065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 6773509 - 6773476
Alignment:
Q  78 cttaatagatactttggtcccttaacttattttt 111  Q
    ||||||| ||||||||||||||||||||||||||    
T  6773509 cttaatacatactttggtcccttaacttattttt 6773476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 33458319 - 33458380
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatt 151  Q
    |||||||| ||||||||||||| | | | ||||||||  | |||||||||||||||||||||    
T  33458319 tttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaatt 33458380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 47163151 - 47163224
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || ||||| |||||||| |||||||| ||| ||||||||||  | ||||||||||||| || |||||    
T  47163151 ttaatatatgctttgctcccttaatttatttttggattttattttggtcctctaactataaagtgccttaattt 47163224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 5e-64; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 78 - 359
Target Start/End: Complemental strand, 7822105 - 7821822
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||||||||||||| |||| ||| |||||||||| |  ||| ||||||||||||||||||  ||| ||||||||||||  ||||     
T  7822105 cttaatacatgctttggtcccttaacttaattttggattttattttggtctcctaattataaagtgtctcaatttggtcccttatgtcttttgccgttac 7822006  T
Q  177 ctcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaatt-ttttaattttag 275  Q
    ||||||||||  |||| |||||||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||||     
T  7822005 ctcttttggtactatccgttacattttaaccataaatgtctaaggtgtaacaacattgcaggtggtctaccatagacctattaaatttttttaattttaa 7821906  T
Q  276 ttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
     |||||||          |||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  7821905 ctgtttgatctttttttgaaatagaaaaccgttggatcatgtaggtctattgtagcctagggtgaatgattaacacctaatttt 7821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 76 - 359
Target Start/End: Original strand, 35633222 - 35633506
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgtt 174  Q
    ||||||||| || ||||||||||||||||||||||| ||| | ||||||||  |||||||||||| ||||||||||| |||| |||||| |||||  |||    
T  35633222 gacttaatacatgctttggtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatttgatcccttatgttttttgccgtt 35633321  T
Q  175 aactcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaattttttaatttta 274  Q
    | || |||| ||| |||| |||||||||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| |||||||    
T  35633322 acctatttttgtcctatccgttacattttaaccataaatgtctaaggtgtaacaacattgcaggtggtctaccatagacctattaaatttttaaatttta 35633421  T
Q  275 gttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
     || || ||         ||||  |||||  |||| |||| |||||| |||| ||| ||||||||||| ||||||||||||||||    
T  35633422 attattcgatatttttttcaaaatgaaaactgttggatcacgtaggtctattatagcctacggtgaataattaacacctaatttt 35633506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 11483106 - 11482978
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||||||||||||||||| |||| | ||||||||    |||||||||||||||| ||||| ||| |||||||||||||| ||||     
T  11483106 cttaatatatgctttggtcccttaacttattttcagatttcattttggtcccttaactataaagtgtcttaatttgatctcttatgtcttttgtcgttat 11483007  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  11483006 ctcttttggtcttatccgttacattttaa 11482978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 40502322 - 40502211
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||| ||| ||||||||||    |||||||||||| |||||||||||||| ||||||||||||| |||| |||||||||||     
T  40502322 tttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaatttaatcccttatgtcttttgtcgttacctcttttggtcc 40502223  T
Q  189 tatctgttacat 200  Q
    |||| |||||||    
T  40502222 tatccgttacat 40502211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 52292591 - 52292719
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcct-tatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||| |||  |||||||||||| ||||     
T  52292591 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtcccgtatgtcttttgtcgttac 52292690  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  52292691 ctcttttggtcttatccgttacattttaa 52292719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 1301041 - 1301157
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||   || ||||||||||   |||||||||||||||||||||||  | |||||||||||||   |||| |||||||||||     
T  1301041 tttggtcccttaacttattttcgaattttattttggtcccataactataaagtgtctcaatttggtcccttatgtcttttaccgttacctcttttggtcc 1301140  T
Q  189 tatctgttacattttaa 205  Q
    |||||||||||||||||    
T  1301141 tatctgttacattttaa 1301157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 52705427 - 52705299
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||| ||||| ||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||||||||     
T  52705427 cttaatacatgctttgatccctcaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgttac 52705328  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||| ||||||| ||||||||||||    
T  52705327 ctcttttgatcatatccgttacattttaa 52705299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 55443669 - 55443541
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| |||||||||||||||||||||||||   || | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||| ||||     
T  55443669 cttaatacatactttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttac 55443570  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||||||  ||| ||||||||||||    
T  55443569 ctcttttggtcccatccgttacattttaa 55443541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 5416196 - 5416323
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| |||||||||||||||||||||||||  ||| | ||||||||    |||||||||| |||||||||||  ||| ||||||||||||| |||| |    
T  5416196 ttaatacatactttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacc 5416295  T
Q  178 tcttttggtcatatctgttacattttaa 205  Q
    ||||||||||  ||| ||||||||||||    
T  5416296 tcttttggtcccatccgttacattttaa 5416323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 79 - 205
Target Start/End: Original strand, 55442592 - 55442719
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| || ||||| |||||||||||||||| | || | ||||||||    |||||||||||||||||||||| |||| |||||||||||||||||| |    
T  55442592 ttaatacatgctttgatcccttaacttattttcaaatttcattttggtcccctaactataaagtgtctcaatttgatcccttatgtcttttgttgttacc 55442691  T
Q  178 tcttttggtcatatctgttacattttaa 205  Q
    | ||||||||  ||| ||||||||||||    
T  55442692 ttttttggtctcatccgttacattttaa 55442719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 32974342 - 32974214
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||| ||  ||||     
T  32974342 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttac 32974243  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||||| || ||||||||||||    
T  32974242 ctcttttggtcatctccgttacattttaa 32974214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 53047894 - 53048022
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||| ||| ||||     
T  53047894 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttac 53047993  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| | || ||||||||||||    
T  53047994 ctcttttggtcctctccgttacattttaa 53048022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 53342713 - 53342841
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||| ||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||| ||||     
T  53342713 cttaatacatgctttggttccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtccattatgtcttttgtcgttac 53342812  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||  |||| ||||||||||||    
T  53342813 ctcttttggtactatccgttacattttaa 53342841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 35835940 - 35835810
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcctt-atgtcttttgttgtt 174  Q
    ||||||||| || |||||||||||||| || ||||  ||| |||||||| | |  ||| |||||||||||||||||| |||||| || |||||||  |||    
T  35835940 gacttaatacatgctttggtcccttaatttgttttcggattttattttgatctcctaagtataaagtgtctcaatttgatccttaatatcttttgccgtt 35835841  T
Q  175 aactcttttggtcatatctgttacattttaa 205  Q
    | |||||||||||||| | ||||||||||||    
T  35835840 acctcttttggtcatacccgttacattttaa 35835810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 35892657 - 35892527
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcctt-atgtcttttgttgtt 174  Q
    ||||||||| || |||||||||||||| || ||||  ||| |||||||| | |  ||| |||||||||||||||||| |||||| || |||||||  |||    
T  35892657 gacttaatacatgctttggtcccttaatttgttttcggattttattttgatctcctaagtataaagtgtctcaatttgatccttaatatcttttgccgtt 35892558  T
Q  175 aactcttttggtcatatctgttacattttaa 205  Q
    | |||||||||||||| | ||||||||||||    
T  35892557 acctcttttggtcatacccgttacattttaa 35892527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 52705274 - 52705216
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  52705274 aaatcgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 52705216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 78 - 202
Target Start/End: Original strand, 7583467 - 7583592
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||| ||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  || ||||||||||||   ||||     
T  7583467 cttaatacatgctttggtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctcttatgtcttttaccgttac 7583566  T
Q  177 ctcttttggtcatatctgttacattt 202  Q
    |||||||||||||||| |||||||||    
T  7583567 ctcttttggtcatatccgttacattt 7583592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 5417155 - 5417039
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctca-atttaatccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||  ||| | ||||||||    |||||||||||||||||| |||    |||||||||||||||||||| |||||||||||     
T  5417155 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcagattggtcccttatgtcttttgttgttacctcttttggtct 5417056  T
Q  189 tatctgttacattttaa 205  Q
    |||| |||| |||||||    
T  5417055 tatccgttatattttaa 5417039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 46446366 - 46446494
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||| ||||| |||||||   || ||||||||||    ||| |||||||||||||||||   ||| ||||||||||||||||||     
T  46446366 cttaatacatgctttggtctcttaatttattttcgaattttattttggtgccttaattataaagtgtctcaattcggtcccttatgtcttttgttgttat 46446465  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  46446466 ctcttttggtcctatccgttacattttaa 46446494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 48035443 - 48035315
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||  ||||     
T  48035443 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgccgttac 48035344  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| | || ||||||||||||    
T  48035343 ctcttttggtcctctccgttacattttaa 48035315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 11482050 - 11482109
Alignment:
Q  300 aaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11482050 aaaaccgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 11482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 32974185 - 32974131
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  32974185 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 32974131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 48035286 - 48035232
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  48035286 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 48035232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 52292744 - 52292802
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  52292744 aaatcgttggatcatgtagatgtattgtagcctacggtgaatgattaacacctaatttt 52292802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 90 - 187
Target Start/End: Complemental strand, 53049144 - 53049046
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtc 187  Q
    |||||||||||||||||||||  ||| ||||||||||    ||||||||||||||||||||||  | ||||||||||| ||| |||| |||||||||||    
T  53049144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtc 53049046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 53346987 - 53346922
Alignment:
Q  293 caaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  53346987 caaatagaaact-gttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 53346922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 55443523 - 55443458
Alignment:
Q  293 caaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  55443523 caaatagaaact-gttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 55443458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 184
Target Start/End: Complemental strand, 19579413 - 19579306
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||| ||||     
T  19579413 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgttac 19579314  T
Q  177 ctcttttg 184  Q
    ||||||||    
T  19579313 ctcttttg 19579306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 7583622 - 7583676
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  7583622 cgttggatcatgtaggtttattgtagcctacggtgaatgaataacacctgatttt 7583676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 40501962 - 40502016
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  40501962 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacgcctgatttt 40502016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 47855457 - 47855383
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  47855457 cttaatacatgctttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaattt 47855383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 55442748 - 55442802
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||| |||||    
T  55442748 cgttggatcatgtaggtttattgttgcctacggtgaatgattaacacctgatttt 55442802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 11219428 - 11219501
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| ||||||||| ||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  11219428 ttaatagatgctttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaattt 11219501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 39287480 - 39287577
Alignment:
Q  91 ttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtc 187  Q
    ||||||||||||||||||||  ||| | ||||||||  | ||||||||||||||||||||||  | |||||||| || ||| |||| |||||||||||    
T  39287480 ttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtc 39287577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 39288558 - 39288449
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||| |||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||| ||||     
T  39288558 cttaatacatgctttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgtcgttat 39288459  T
Q  177 ctcttttggt 186  Q
    ||||||||||    
T  39288458 ctcttttggt 39288449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 52293641 - 52293532
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||| | | |||| |    
T  52293641 ttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacc 52293542  T
Q  178 tcttttggtc 187  Q
    ||||||||||    
T  52293541 tcttttggtc 52293532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 32979096 - 32979164
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    |||||||||||||||| ||||||| || | ||||||||  | |||||||||||||||||||||| ||||    
T  32979096 ctttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcc 32979164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 11481955 - 11482026
Alignment:
Q  135 tataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtcatatctgttacattttaa 205  Q
    ||||||||||||||||||  ||| ||||||||||||  |||| ||||||||||| |||| ||||||||||||    
T  11481955 tataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttacattttaa 11482026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 40501822 - 40501933
Alignment:
Q  95 tcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtcatatct 193  Q
    |||||||| ||||||| |||| ||||||||||    |||||||||| | |||||||||  ||| ||||||||||||  |||| ||||||||||| ||||     
T  40501822 tcccttaatttattttcagattttattttggtcacctaactataaaatatctcaatttggtcccttatgtcttttgccgttacctcttttggtcttatcc 40501921  T
Q  194 gttacattttaa 205  Q
    |||| |||||||    
T  40501922 gttaaattttaa 40501933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 5417010 - 5416956
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||| |||||||||  |||||||||||||||||||||| |||||    
T  5417010 cgttggatcatgtagatttattgtatcctacggtgaatgattaacacctgatttt 5416956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 7820387 - 7820461
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | ||||||||  | |||||||||||||| |||||||    
T  7820387 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaattt 7820461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 11220777 - 11220703
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | ||||||||    ||||||||||||||||||||||    
T  11220777 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaattt 11220703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 19579217 - 19579291
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||| |||| | ||||||||    |||||||||| |||||||||||    
T  19579217 cttaatacatgctttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaattt 19579291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 32973136 - 32973210
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||    
T  32973136 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaattt 32973210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 35835781 - 35835727
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||| | | ||||||||||||||||||||| ||||||    
T  35835781 cgttggatcatgtaggtttattatggcctacggtgaatgattaacaccaaatttt 35835727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 35892498 - 35892444
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||| | | ||||||||||||||||||||| ||||||    
T  35892498 cgttggatcatgtaggtttattatggcctacggtgaatgattaacaccaaatttt 35892444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 53048061 - 53048103
Alignment:
Q  317 taggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||||||| |||||||||||||||||||||| |||||    
T  53048061 taggtttattgtagcctacggtgaatgattaacacctgatttt 53048103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 53342870 - 53342916
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacac 351  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  53342870 cgttggatcatgtaggtttattgtagcctacggtaaatgattaacac 53342916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 54654073 - 54654011
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  54654073 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaattt 54654011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 359
Target Start/End: Original strand, 5416361 - 5416406
Alignment:
Q  314 atgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||    
T  5416361 atgtaggtttattgtagcctacggtgaatgactaacacctgatttt 5416406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 48825821 - 48825918
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggt 186  Q
    |||||||||||||||||||||   || |||||||| ||   ||||||||||||||||||||||  | ||||||||||| ||| |||| ||| ||||||    
T  48825821 tttggtcccttaacttattttcgaattttattttgattccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcatttggt 48825918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 39190824 - 39190768
Alignment:
Q  97 ccttaacttatttttagatcttattttggttttataactataaagtgtctcaattta 153  Q
    ||||||||||||||||||| ||||||||||    ||| |||||||||||||||||||    
T  39190824 ccttaacttatttttagattttattttggtcccctaattataaagtgtctcaattta 39190768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 48034025 - 48034080
Alignment:
Q  97 ccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||||  ||| ||||||||||  | ||||||||||||||||||||||    
T  48034025 ccttaacttattttcggattttattttggtcctctaactataaagtgtctcaattt 48034080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 48252941 - 48253004
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||| || | | ||||||||||    ||||||||||||||||||||||    
T  48252941 ctttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaattt 48253004  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 48826746 - 48826690
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| |||||||||||||||||||| |  | ||||||||||||||||| |||||    
T  48826746 aaatcgttggatcatgtaggtttattgtagcc--ctgtgaatgattaacacctgatttt 48826690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 8372723 - 8372661
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | | | ||||||||    ||||||||||||||||||||||    
T  8372723 tttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaattt 8372661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 29536723 - 29536785
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||| |||||||||| ||| | |||||| |  | ||||||||||||||||||||||    
T  29536723 tttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaattt 29536785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 33563958 - 33564020
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||| ||    ||||||||||||||||||||||    
T  33563958 tttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaattt 33564020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 39133067 - 39133160
Alignment:
Q  131 taactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtcatatctgttacattttaatcat-aaatgtctaaggtg 223  Q
    ||||||||||||||||||||||  | ||||||||||| | | |||| ||||||||||| | |||||||  |||||| ||| ||||||||||||||    
T  39133067 taactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgttagtttttaa-catcaaatgtctaaggtg 39133160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 43101903 - 43101965
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | | | ||||||||  | ||| ||||||||||||||||||    
T  43101903 tttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaattt 43101965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 47808209 - 47808151
Alignment:
Q  94 gtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||| ||| | | |||||||   ||||||||||||||||||||||    
T  47808209 gtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaattt 47808151  T

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Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 49122109 - 49122047
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||| ||||||||||||| | | | |||||||| |  ||||||||||||||||||||||    
T  49122109 tttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaattt 49122047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 111
Target Start/End: Original strand, 23886113 - 23886146
Alignment:
Q  78 cttaatagatactttggtcccttaacttattttt 111  Q
    ||||||| ||||||||||||||||||||||||||    
T  23886113 cttaatacatactttggtcccttaacttattttt 23886146  T

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Target: chr8 (Bit Score: 114; Significance: 2e-57; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 76 - 359
Target Start/End: Original strand, 45384235 - 45384519
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgtt 174  Q
    ||||||||| || |||||||||||||||||||||||  || | ||||| ||  |||||||||||| ||||||||||| |||| |||||| ||||| ||||    
T  45384235 gacttaatacatgctttggtcccttaacttatttttgaatttcattttagtcctataactataaaatgtctcaatttgatcccttatgttttttgctgtt 45384334  T
Q  175 aactcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaattttttaatttta 274  Q
    | || ||||||||||||| |||||||||||| ||||||| |||||||||||| | |||||||| |||||||||||||||||||||| |||||||||||||    
T  45384335 acctattttggtcatatccgttacattttaaccataaatatctaaggtgtaacaacattgcaggtggtctaccatagacctattaatttttttaatttta 45384434  T
Q  275 gttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
      |||| ||         ||||  ||||| | ||||||||||||||| |||| ||| ||||||| ||| ||||||||||||||||    
T  45384435 actgttcgatatttttttcaaaatgaaaaccattgaatcatgtaggtctattataggctacggtaaataattaacacctaatttt 45384519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 156 - 359
Target Start/End: Original strand, 38664445 - 38664649
Alignment:
Q  156 ccttatgtcttttgttgttaactcttttggtcatatctgttacatttt-aatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacc 254  Q
    |||||||||||||   |||| |||||||| ||||||| ||||  |||| || ||||||||| ||||||||  |||| |||||||||| ||||||||||||    
T  38664445 ccttatgtcttttaccgttacctcttttgttcatatccgttagttttttaaccataaatgtataaggtgtggtagcgttgcagatggactaccatagacc 38664544  T
Q  255 tattaaattttttaattttagttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacaccta 354  Q
    ||||||||||||||||||||  |||||||         ||||||||||||| ||| ||||| || || |||||||| |||||||||||||||||||||||    
T  38664545 tattaaattttttaattttaactgtttgatatttttttcaaatagaaaatcattggatcatataagtctattgtagcctacggtgaatgattaacaccta 38664644  T
Q  355 atttt 359  Q
    |||||    
T  38664645 atttt 38664649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 6844692 - 6844564
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | |||||||||   |||| |||||||||||||||||  | |||||||| |||||  ||||     
T  6844692 cttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtcccttatgttttttgccgttat 6844593  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| ||||  |||||||||||    
T  6844592 ctcttttggtcctatccattacattttaa 6844564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 6844529 - 6844481
Alignment:
Q  311 atcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  6844529 atcatgtaggtgtattgtagcctacggtgaatgattaacacctaatttt 6844481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 45385913 - 45385833
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcct 158  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||   |||| |||||||||| ||||||| |||||    
T  45385913 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcct 45385833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Original strand, 14820203 - 14820265
Alignment:
Q  91 ttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattta 153  Q
    ||||||||||||||||||||| ||| ||| ||||||    |||||||||||||||||||||||    
T  14820203 ttggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaattta 14820265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 24068327 - 24068401
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| | | | ||||||||    ||||||||||||||||||||||    
T  24068327 cttaatacatgctttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaattt 24068401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 3612701 - 3612628
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || |||||||||||||||||||||||  || |||||||||| |  ||||| |||| |||||||||||    
T  3612701 ttaatacatgctttggtcccttaacttatttttgaattttattttggtctcttaactttaaattgtctcaattt 3612628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 6843753 - 6843826
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || ||||| ||||||||||||||||  ||| ||||||||||    ||||||||||||||||||||||    
T  6843753 ttaatacatgctttgatcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaattt 6843826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 36756073 - 36756133
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaat 150  Q
    |||||||||||||||||||||||| | ||| ||||||   ||||||||||||||| |||||    
T  36756073 tttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaat 36756133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 13360348 - 13360387
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagat 115  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  13360348 gacttaatacatgctttggtcccttaacttatttttagat 13360387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 16363931 - 16363852
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    ||||||| ||| |||||||||||||||||||||| | | | | ||||||  | |||||||||||| ||||||||| ||||    
T  16363931 cttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcc 16363852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 29441613 - 29441692
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    ||||||| || |||||||| ||||||||||||||  || ||||||||||    ||||| |||| ||||||||||||||||    
T  29441613 cttaatacatgctttggtctcttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttaatcc 29441692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 37274896 - 37274958
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| | ||||||||||||| ||| | ||||||||  | ||||||||||||||||||||||    
T  37274896 tttggttctttaacttatttttggatttcattttggtcctctaactataaagtgtctcaattt 37274958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 19913490 - 19913563
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || |||||||||||||||||||||||  || | | ||||||  | |||||||||||||| |||||||    
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaattt 19913563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 7565405 - 7565357
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| ||| ||||||    
T  7565405 cttaatacatgctttggtcccttaacttatttttggattttaatttggt 7565357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 15989001 - 15989049
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || |||||||||||||||||||||||| || | ||||||||    
T  15989001 cttaatacatgctttggtcccttaacttatttttaaatttcattttggt 15989049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 24706331 - 24706283
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    
T  24706331 cttaatacatgctttggtcccttaacttatttttggatttcattttggt 24706283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 3e-56; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 78 - 351
Target Start/End: Original strand, 15445433 - 15445707
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    ||| ||||||||||||||||||  || |||||||||||||  ||||     
T  15445433 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctcttatgtcttttgccgttat 15445532  T
Q  177 ctcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaattttttaattttagt 276  Q
    || |||||||| |||| |||||||||||| ||||||||||| | |||||| |||||||| | ||||||||||||||| |||||||||||||||||||| |    
T  15445533 cttttttggtcctatccgttacattttaaccataaatgtcttatgtgtaacagcattgctggtggtctaccatagacttattaaattttttaattttaat 15445632  T
Q  277 tgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacac 351  Q
    | ||| |         ||||||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||    
T  15445633 tatttaatctttttttcaaatagaaaaccgttggatcatgtaggtttattgtagcatacggtgaatgattaacac 15445707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 206
Target Start/End: Complemental strand, 44690962 - 44690845
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||  ||| | |||||||||  ||||||||||| |||||||||||| | |||||||||||||||| ||| |||||||||||     
T  44690962 tttggtcccttaacttattttcggatttcattttggttccataactataaaatgtctcaatttagtcccttatgtcttttgttattacctcttttggtcc 44690863  T
Q  189 tatctgttacattttaat 206  Q
    |||  |||||||||||||    
T  44690862 tattcgttacattttaat 44690845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 221 - 359
Target Start/End: Complemental strand, 53401457 - 53401318
Alignment:
Q  221 gtgtaatagcattgcagatggtctaccatagacctattaaattttttaattttagttgtttga-nnnnnnnnncaaatagaaaatcgttgaatcatgtag 319  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||  |||||||          ||||||||||| ||||| |||||||||    
T  53401457 gtgtaacagcattgcaagtggtctaccatagacctattaaattttttaattttaactgtttgatcttttttttcaaatagaaaaccgttggatcatgtag 53401358  T
Q  320 gtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    || |||||||   |||||||||| ||||||||||||||||    
T  53401357 gtctattgtaacatacggtgaataattaacacctaatttt 53401318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 52882037 - 52881921
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||||||||| |||||||| ||| ||||||||||    | |||||||||||||||||||   ||| ||||||| ||||| |||| ||||||||||||    
T  52882037 tttggtcccttaatttatttttggattttattttggtcccctgactataaagtgtctcaattaggtcccttatgtcatttgtcgttacctcttttggtca 52881938  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  52881937 tatccgttacattttaa 52881921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 19049029 - 19049083
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19049029 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctaatttt 19049083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 52880810 - 52880939
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatctt-attttggttttataactataaagtgtctcaatttaatcctt-atgtcttttgttgtta 175  Q
    ||||||| || ||||| ||||||||||||||||  ||| || ||||||||    ||||||||||||||||||||||  ||||| ||||||||||  ||||    
T  52880810 cttaatacatgctttgctcccttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttttgccgtta 52880909  T
Q  176 actcttttggtcatatctgttacattttaa 205  Q
     ||||||||||| |||| ||||||||||||    
T  52880910 cctcttttggtcctatccgttacattttaa 52880939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 156 - 359
Target Start/End: Complemental strand, 53151613 - 53151411
Alignment:
Q  156 ccttatgtcttttgttgttaactcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacct 255  Q
    |||||| |||||||| |||| |||||| | || |||| ||||  |||||| |||||||||||||| ||||  ||| ||| ||||||  ||||||||||||    
T  53151613 ccttatctcttttgtcgttacctcttt-gatcctatcggttagtttttaaccataaatgtctaagatgtagcagcgttgtagatggattaccatagacct 53151515  T
Q  256 attaaattttttaattttagttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaa 355  Q
    ||||||  |||||||||||    |||||         ||| ||||||||| ||| ||||| || || |||||||  |||| |||||||||||||||||||    
T  53151514 attaaaaattttaattttaaagatttgatcttttttccaagtagaaaatcattggatcatataagtctattgtaacctacagtgaatgattaacacctaa 53151415  T
Q  356 tttt 359  Q
    ||||    
T  53151414 tttt 53151411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 937079 - 937021
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  937079 aaatcgttggatcatgtaggtgtattgtagcctacggtgaatgattaacacctgatttt 937021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 12391830 - 12391776
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  12391830 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 12391776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 53400182 - 53400256
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||| |||||||||||||||||||| | ||||||||   |||||||||||||||||||||||    
T  53400182 cttaatacatgctttggccccttaacttatttttagatttcattttggtcccataactataaagtgtctcaattt 53400256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 2309853 - 2309969
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||||||||| |||||||| ||| | |||||||| | |||| |||||||||| ||||||| || |||||||||||||   |||| | |||||||||     
T  2309853 tttggtcccttaatttatttttggatttcattttggtctcataattataaagtgtttcaatttgatcccttatgtcttttaccgttaccacttttggtcc 2309952  T
Q  189 tatctgttacattttaa 205  Q
     ||| ||||||||||||    
T  2309953 catccgttacattttaa 2309969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 30671003 - 30671119
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||| |||||||||||||  ||| | ||||||||    ||||||||||||||||||||||| || ||||| |||||||| |||| |||||||| ||     
T  30671003 tttggtctcttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttagtctcttatatcttttgtcgttacctcttttgatcc 30671102  T
Q  189 tatctgttacattttaa 205  Q
    ||||  |||||||||||    
T  30671103 tatccattacattttaa 30671119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 2310900 - 2310773
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| || ||||||||||||||||||||||   || | ||||||||    |||||||||| |||||||||||  ||| ||||||||||||  |||| |    
T  2310900 ttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgccgttacc 2310801  T
Q  178 tcttttggtcatatctgttacattttaa 205  Q
    ||||||| || |||| ||||||||||||    
T  2310800 tcttttgatcctatccgttacattttaa 2310773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 359
Target Start/End: Complemental strand, 2310755 - 2310690
Alignment:
Q  293 caaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||| | |||| |||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  2310755 caaatagaaact-gttggatcatgtaggtttattgtagcctactgtgaatgattaacacctgatttt 2310690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 19049861 - 19049807
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  19049861 cgttggatcatgtagatttattgtagcctacggtgaatgattaacacctgatttt 19049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 31711101 - 31711163
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||||||  | ||||||||||||||||||||||    
T  31711101 tttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaattt 31711163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 44690821 - 44690763
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| |||||||| |||||||||||  ||||||||||||||||||||| |||||    
T  44690821 aaatcgttggatcatgtaagtttattgtagcttacggtgaatgattaacacctgatttt 44690763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 53401570 - 53401496
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||| ||   ||||||||||| |||||||||||    
T  53401570 cttaatacatgctttggtcccttaacttatttttggattttattttagtcccataactataaactgtctcaattt 53401496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 350
Target Start/End: Complemental strand, 52881892 - 52881847
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaaca 350  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||    
T  52881892 cgttggatcatgtaggtttattgtagcctacggtgaatgattaaca 52881847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 936225 - 936325
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||| ||||||||||||||||| ||| ||||||||||    |||||||||||| | | ||||| || ||||||||||| |||||||| |||||||| |||    
T  936225 tttgatcccttaacttatttttggattttattttggtcccttaactataaagtattttaatttgatcccttatgtcttctgttgttacctcttttgatca 936324  T
Q  189 t 189  Q
    |    
T  936325 t 936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 937217 - 937125
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttg 169  Q
    ||||||| || |||||||||||||| |||||||  ||| | ||||||||    ||||||||||||||||||||||| | ||||||||||||||    
T  937217 cttaatacatgctttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttttg 937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 2309998 - 2310052
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||| ||||||||||| |||||||||||||| ||||||| |||||    
T  2309998 cgttggatcatgtatgtttattgtagcctacggtgaatgatcaacacctgatttt 2310052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 15446789 - 15446715
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||  | ||| |||||||||| |||||||    
T  15446789 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaattt 15446715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 28103593 - 28103531
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  28103593 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaattt 28103531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 29833369 - 29833479
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||| |||||| |||||||||||  | |||||| |||||||| ||||     
T  29833369 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttac 29833468  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  29833469 ctcttttggtc 29833479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 30682717 - 30682791
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| ||| |||||||||||||||||||||||| | | ||||||||    |||||||||||||||| |||||    
T  30682717 cttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaattt 30682791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 38553938 - 38554000
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||| |||||||  | | |||||||||| || ||||||||||||||||||||||    
T  38553938 tttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaattt 38554000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 40146730 - 40146668
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||| ||||||| | | ||||||||||  | ||||||||||||||||||||||    
T  40146730 tttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaattt 40146668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 19049979 - 19049882
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggt 186  Q
    |||||||||||||||||||||| ||| | |||||| |    ||| ||||||||||||||||||  | |||||||||||||||  ||| ||||||||||    
T  19049979 tttggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtcccttatgtcttttgtcattacctcttttggt 19049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 47667177 - 47667249
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| ||| |||||||| ||||||||||||| | | ||||||||| | | ||||||||||||||||||||||    
T  47667177 ttaatacatattttggtcctttaacttatttttggtttttattttgg-tctctaactataaagtgtctcaattt 47667249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 350
Target Start/End: Original strand, 52880968 - 52881013
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaaca 350  Q
    ||||| ||||||||| |||||||||| |||||||||||||||||||    
T  52880968 cgttggatcatgtagatttattgtagcctacggtgaatgattaaca 52881013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 44655718 - 44655766
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  44655718 cttaatacatgctttggtcccttaacttattttttgattttattttggt 44655766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 44664445 - 44664397
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  44664445 cttaatacatcctttggtcccttaacttatttttggattttattttggt 44664397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 30671147 - 30671202
Alignment:
Q  304 tcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||| ||||||||||| ||||| || || ||||||||||||||||||| |||||    
T  30671147 tcgttggatcatgtaggtgtattgcagcctccggtgaatgattaacacctgatttt 30671202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 12396981 - 12396919
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||    
T  12396981 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaattt 12396919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 26393234 - 26393172
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||||||||||||   | |||||||| |  | ||||||||||||||||||||||    
T  26393234 tttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaattt 26393172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 27408772 - 27408834
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||||||||||| || | | | ||||||  | ||||||||||||||||||||||    
T  27408772 tttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaattt 27408834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 30672183 - 30672109
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||| ||||||||||||||||    
T  30672183 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaattt 30672109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 38555289 - 38555199
Alignment:
Q  183 tggtcatatctgttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagac-ctattaaattttttaattt 272  Q
    ||||||| || ||||  |||||||| ||||||||||||||| |  | | ||| || |||||||||||||||  ||||||||||||||||||    
T  38555289 tggtcatttccgttagtttttaatcttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaattt 38555199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 46796133 - 46796071
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | | | ||||||||    ||||||||||||||||||||||    
T  46796133 tttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaattt 46796071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 48207836 - 48207762
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||| ||||||||||||| | | | |||||||| |  ||| ||||||||||||||||||    
T  48207836 cttaatatatgctttggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaattt 48207762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 8516971 - 8516938
Alignment:
Q  78 cttaatagatactttggtcccttaacttattttt 111  Q
    ||||||| ||||||||||||||||||||||||||    
T  8516971 cttaatacatactttggtcccttaacttattttt 8516938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 19048951 - 19049000
Alignment:
Q  156 ccttatgtcttttgttgttaactcttttggtcatatctgttacattttaa 205  Q
    ||||||||||||||  |||| ||||||||||| |||| ||||||||||||    
T  19048951 ccttatgtcttttgccgttatctcttttggtcctatccgttacattttaa 19049000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 28370759 - 28370686
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || ||||||||||||||||||||||| ||| | | ||||||  | ||||| |||| |||||||||||    
T  28370759 ttaatacatgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaattt 28370686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 43895716 - 43895683
Alignment:
Q  78 cttaatagatactttggtcccttaacttattttt 111  Q
    ||||||||||| ||||||||||||||||||||||    
T  43895716 cttaatagatagtttggtcccttaacttattttt 43895683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 44302728 - 44302796
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    |||||||||||||||| ||||||  || | || |||||  | |||||||||||||||||||||| ||||    
T  44302728 ctttggtcccttaactaatttttgaatttcatattggtcatctaactataaagtgtctcaatttgatcc 44302796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 132 - 330
Target Start/End: Complemental strand, 11443678 - 11443479
Alignment:
Q  132 aactataaagtgtctcaatttaatcctt-atgtcttttgttgttaactcttttggtcatatctgttacattttaatcataaatgtctaaggtgtaatagc 230  Q
    |||||||| ||||||||||||  || || ||||||||||  |||| |||||||| ||||||| |||||||||||| |||||||||||||||||||| | |    
T  11443678 aactataatgtgtctcaatttggtcatttatgtcttttgccgttacctcttttgatcatatccgttacattttaaccataaatgtctaaggtgtaacaac 11443579  T
Q  231 attgcagatggtctaccatagacctattaaattttttaattttagttgtttgannnnnnnnncaaatagaaaatcgttgaatcatgtaggtttattgtag 330  Q
    ||||||  |||||||||||||||||||||||    |||||||||  |||||||         |||||||||||  |||| ||||||||| ||||||||||    
T  11443578 attgcatgtggtctaccatagacctattaaaaaaattaattttaactgtttgatctttttttcaaatagaaaactgttggatcatgtagatttattgtag 11443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 32521694 - 32521811
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtc 187  Q
    ||||| ||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| |||| ||||||||||||  |||| |||||||||||    
T  32521694 ctttgatcccttaacttatttttagattttattttggtcccctaactataaagtgtctcaatttgatccattatgtcttttgccgttacctcttttggtc 32521793  T
Q  188 atatctgttacattttaa 205  Q
    ||||| ||||||||||||    
T  32521794 atatccgttacattttaa 32521811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 15613500 - 15613576
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| || ||||| ||||||||||||||||| ||| | |||||||| || ||||||||||||||||||||||    
T  15613500 gacttaatacatgctttgatcccttaacttatttttggatttcattttggtcttctaactataaagtgtctcaattt 15613576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 22650594 - 22650536
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| || |||||    
T  22650594 aaatcgttggatcatgtagatttattgtagtctacggtgaatgattaacatctgatttt 22650536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 4568093 - 4567965
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||   |||     
T  4568093 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcctttac 4567994  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    || |||||||||| || ||||||||||||    
T  4567993 ctattttggtcatctccgttacattttaa 4567965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 15509193 - 15509321
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaac 177  Q
    |||||| || ||||||||||||||||||||||  ||| ||||||||||    ||||||||||||||||||||||  | ||||||||||| ||  |||| |    
T  15509193 ttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacc 15509292  T
Q  178 tcttttggtcatatctgttacattttaat 206  Q
    | |||||||| | || |||| ||||||||    
T  15509293 tattttggtcctctccgttatattttaat 15509321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 20991756 - 20991640
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    |||| ||||||||||||||||  ||| | |||||||     |||||||||| |||||||||||  ||| ||||||||||||| |||| |||||||||||     
T  20991756 tttgatcccttaacttattttcggatttcattttggccccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcc 20991657  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  20991656 tatccgttacattttaa 20991640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 4566949 - 4567068
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| || ||||||||||||||| ||||||  ||| | |||||| |    ||||||||||||||||||||||  ||| ||||||||| ||| |||| |    
T  4566949 ttaatacatgctttggtcccttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacc 4567048  T
Q  178 tcttttggtcatatctgtta 197  Q
    |||||||||||| |||||||    
T  4567049 tcttttggtcatctctgtta 4567068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 22650694 - 22650619
Alignment:
Q  131 taactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtcatatctgttacattttaa 205  Q
    ||||||||||||||||||||||  ||| ||||||||||||  |||| ||||||||||| |||| ||||||||||||    
T  22650694 taactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgttacattttaa 22650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 15509349 - 15509403
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  15509349 cgttggatcatgtaggtttattgtagcctacggtgcatgattaacacctgatttt 15509403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 20988687 - 20988797
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||   || | ||||||||    ||||||||||||||||||||||| || |||||||||| ||  ||||     
T  20988687 cttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctcttatgtcttgtgccgttac 20988786  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  20988787 ctcttttggtc 20988797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 351
Target Start/End: Complemental strand, 20989611 - 20989565
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacac 351  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||    
T  20989611 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacac 20989565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 32521925 - 32521871
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  32521925 cgttggatcatgtaggtttattgtagcctacagtgaatgattaacacctgatttt 32521871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 4567936 - 4567882
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||| ||| ||||||||||||| |||||    
T  4567936 cgttggatcatgtaggtttattgtagcctacagtgtatgattaacacctgatttt 4567882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 42980828 - 42980754
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||| ||  |||| |||||||||||| | ||||||||  ||||||||||||||||||||||||    
T  42980828 cttaatacatgctttgatcttttaatttatttttagatttcattttggtcctataactataaagtgtctcaattt 42980754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 32415304 - 32415256
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| ||||||    
T  32415304 cttaatacatactttggtcccttaacttatttttggattttaatttggt 32415256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 5061025 - 5061099
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    |||  |||||||||||||||||    
T  5061025 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaattt 5061099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 7345497 - 7345435
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||| |||||||||||||||||  || | ||||||||  | ||||||||||||||||||||||    
T  7345497 tttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaattt 7345435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 15153874 - 15153948
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || ||| ||||||  | ||||| |||| |||||||||||    
T  15153874 cttaatacatgctttggtcccttaacttatttttgaattttaatttggtcctttaactttaaactgtctcaattt 15153948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 15615067 - 15615005
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||| ||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  15615067 tttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaattt 15615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 79 - 192
Target Start/End: Complemental strand, 32522040 - 32521926
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaac 177  Q
    |||||| || |||||||| ||||| |||||||  ||| | ||||||||    |||||||| |||||||||||||  ||| || |||||||||| |||| |    
T  32522040 ttaatacatgctttggtctcttaatttattttcggatttcattttggtcccctaactatagagtgtctcaatttggtcccttgtgtcttttgtcgttacc 32521941  T
Q  178 tcttttggtcatatc 192  Q
    |||||||||| ||||    
T  32521940 tcttttggtcctatc 32521926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 223346 - 223419
Alignment:
Q  200 ttttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagac-ctattaaattttttaattt 272  Q
    |||||||| ||||||||||||||| |  | | ||| || |||||||||||||||  ||||||||||||||||||    
T  223346 ttttaatcttaaatgtctaaggtgaaccaactttgtaggtggtctaccatagactttattaaattttttaattt 223419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 12938749 - 12938676
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || |||| ||||||||||||||||||| || | |||||||| |  ||||| |||| |||||||||||    
T  12938749 ttaatacatgctttagtcccttaacttatttttaaatttcattttggtctcttaactttaaactgtctcaattt 12938676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 641688 - 641720
Alignment:
Q  79 ttaatagatactttggtcccttaacttattttt 111  Q
    |||||| ||||||||||||||||||||||||||    
T  641688 ttaatacatactttggtcccttaacttattttt 641720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 152
Target Start/End: Original strand, 1273084 - 1273160
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| ||  ||||||||||||| |||||||| | | | ||||||||  | |||||||||| |||||||||||    
T  1273084 gacttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaattt 1273160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 1982709 - 1982757
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || |||||||||||||||||||||||  || ||||||||||    
T  1982709 cttaatacatgctttggtcccttaacttatttttgaattttattttggt 1982757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 18693707 - 18693767
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaat 150  Q
    ||||||||||||||||||||||  || ||||||||||    |||||||||| |||||||||    
T  18693707 tttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaat 18693767  T

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Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 33837862 - 33837746
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||||||||||||||||| |||| ||||||||||    ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||     
T  33837862 tttggtcccttaacttattttcagattttattttggtcccctaactataaagtgtctcaatttaatcccttatgtcttttgtcgttacctcttttggtcc 33837763  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  33837762 tatccgttacattttaa 33837746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 94 - 205
Target Start/End: Complemental strand, 4630187 - 4630075
Alignment:
Q  94 gtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaactcttttggtcatatc 192  Q
    ||||||||||||||||| |||| | ||||||||    ||||||||||||||||||||||  || ||||||||||||||||||| ||||||||||| ||||    
T  4630187 gtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctcttatgtcttttgttgttacctcttttggtcctatc 4630088  T
Q  193 tgttacattttaa 205  Q
     ||||||||||||    
T  4630087 cgttacattttaa 4630075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 3254853 - 3254981
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | |||||||||   ||| |||| |||||||||||||  ||| ||||||||||||| ||||     
T  3254853 cttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtcccttatgtcttttgtcgttac 3254952  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  3254953 ctcttttggtcctatccgttacattttaa 3254981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 4628879 - 4629007
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcct-tatgtcttttgttgttaa 176  Q
    ||||||| || |||| |||||||||||||||||| ||| ||||||||||  | ||  |||||||| ||||||||| ||||  |||||||||||  ||||     
T  4628879 cttaatatatgctttagtcccttaacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccatatgtcttttgccgttac 4628978  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||||||||||| ||||||||||||    
T  4628979 ctcttttggtcatatccgttacattttaa 4629007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 3666375 - 3666259
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||  ||| | ||||||||   |||||||||||||||||||||||  | ||||||||||||    |||| ||||||||||||    
T  3666375 tttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtctttaaccgttacctcttttggtca 3666276  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  3666275 tatccgttacattttaa 3666259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 41313374 - 41313258
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||   || ||||||||||    |||||||||||||||| ||||| |||| ||||||||||||  |||| |||||||||||     
T  41313374 tttggtcccttaacttattttcgaattttattttggtcccctaactataaagtgtctgaatttgatcccttatgtcttttgccgttacctcttttggtct 41313275  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  41313274 tatccgttacattttaa 41313258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 12854223 - 12854149
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||||||| | ||||||||    ||||||||||||||||||||||    
T  12854223 cttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaattt 12854149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 33837721 - 33837663
Alignment:
Q  301 aaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  33837721 aaatcgttggatcatgtaggtgtattgtagcctacggtgaatgattaacacctgatttt 33837663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 310 - 359
Target Start/End: Complemental strand, 5994225 - 5994176
Alignment:
Q  310 aatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  5994225 aatcatgtaggtttattggagtctacggtgaatgattaatacctaatttt 5994176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 2306623 - 2306569
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  2306623 cgttggatcatgtaggtttattgtagcctacgctgaatgattaacacctgatttt 2306569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 3255000 - 3255054
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  3255000 cgttggatcatgtaggtttattgtagcctacggtgaacgattaacacctgatttt 3255054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 6706923 - 6706997
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  6706923 cttaatacatgctttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaattt 6706997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 609
Target Start/End: Complemental strand, 5994024 - 5993955
Alignment:
Q  541 ctactaattccactttc-ctatctagaaacgctcttttgtcgctcattccgaaaacataaacctctctat 609  Q
    ||||||||||||||||  |||| |||||||| |||||||||||||||| |  ||||||||||||||||||    
T  5994024 ctactaattccactttggctatatagaaacgttcttttgtcgctcattgcagaaacataaacctctctat 5993955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 2305537 - 2305647
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||| ||||||||||||||||| ||| | |||||| |    ||||||||||||||||||||||  | ||||||||||| ||  ||||     
T  2305537 cttaatacatgctttgatcccttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttac 2305636  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  2305637 ctcttttggtc 2305647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 3255840 - 3255786
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| ||| ||| |||||||||||||| |||||    
T  3255840 cgttggatcatgtaggtttattgtagcctatggtaaatgattaacacctgatttt 3255786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 4630046 - 4629992
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| ||| ||| |||||||||||||| |||||    
T  4630046 cgttggatcatgtaggtttattgtagcctatggtaaatgattaacacctgatttt 4629992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 7038439 - 7038377
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  7038439 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaattt 7038377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 12852883 - 12852957
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||| |||| ||| | ||||||||    ||||||||||||||||||||||    
T  12852883 cttaatacatgctttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaattt 12852957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 3665221 - 3665333
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||  | |||||||||| ||| |||||||  | ||||||||||| ||  ||||     
T  3665221 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtcccttatgtcttctgccgttac 3665320  T
Q  177 ctcttttggtcat 189  Q
    |||||||| ||||    
T  3665321 ctcttttgatcat 3665333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 10477350 - 10477413
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||| |||||||||||||| ||| | |||||||| |  ||| ||||||||||||||||||    
T  10477350 ctttggtctcttaacttatttttggatttcattttggtctcttaattataaagtgtctcaattt 10477413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 2306779 - 2306670
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||| ||||||||||||||||  ||| ||||||||| ||  ||||     
T  2306779 cttaatacatgctttggtcccttaacttattttg-gatttcattttggtcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgttac 2306681  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  2306680 ctcttttggtc 2306670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 3255981 - 3255871
Alignment:
Q  94 gtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaactcttttggtcatatc 192  Q
    |||||||||||||||||  ||| | ||||||||    |||||||||||||| |||||||  || |||||||||||||  |||| ||| ||||||| || |    
T  3255981 gtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctcttatgtcttttgccgttatctcatttggtcctacc 3255882  T
Q  193 tgttacatttt 203  Q
     ||||||||||    
T  3255881 cgttacatttt 3255871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 5564056 - 5564130
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | ||||||||    ||| ||||||||||||||||||    
T  5564056 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaattt 5564130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 5565264 - 5565190
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | ||||||||    ||| ||||||||||||||||||    
T  5565264 cttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaattt 5565190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 14482210 - 14482136
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | |||||||||   ||||| ||||| ||||||||||    
T  14482210 cttaatacatgctttggtcccttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaattt 14482136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 41312497 - 41312607
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||| ||||||||||||  ||| | |||||| |  | |||||||||||| |||||||||  || |||||||||| ||  ||||     
T  41312497 cttaatacatgctttggtccattaacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctcttatgtcttatgccgttac 41312596  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  41312597 ctcttttggtc 41312607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 14573927 - 14573854
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatt 151  Q
    ||||||| || ||||||||||||||| ||||||| ||| | ||||||||    ||||||||||||||| |||||    
T  14573927 cttaatacatgctttggtcccttaacatatttttggatttcattttggtcccctaactataaagtgtcacaatt 14573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 10367248 - 10367311
Alignment:
Q  90 tttggtcccttaacttatttttagatctt-attttggttttataactataaagtgtctcaattta 153  Q
    |||||| ||||||||||||||| ||| || | ||||||||  |||||||||||||||||||||||    
T  10367248 tttggttccttaacttattttt-gattttcaatttggtttcttaactataaagtgtctcaattta 10367311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 27657866 - 27657818
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || |||||||||||||| |||||||| ||| ||||||||||    
T  27657866 cttaatacatgctttggtcccttaatttatttttggattttattttggt 27657818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 28109990 - 28109914
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| ||  |||||||||||||||||||||| | | | | |||||| | ||||| ||||||| |||||||||    
T  28109990 gacttaatatatgatttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaattt 28109914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 195 - 359
Target Start/End: Original strand, 42246006 - 42246170
Alignment:
Q  195 ttacattttaatcataaatgtctaaggtgtaatagcattgcagatggtctaccatagacctattaaattttttaattttagttgtttgannnnnnnnnca 294  Q
    ||||||||||| |||||||||| ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||  |||| ||         ||    
T  42246006 ttacattttaaccataaatgtccaaggtgtaacaacattgcaggtggtttaccatagacctattaaattttttaattttaactgttcgatatttttttca 42246105  T
Q  295 aatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||   ||||  |||| ||||||||||| |||| |||  ||||||||||||||||||| |||||||    
T  42246106 aaataaaaacggttggatcatgtaggtctattatagcatacggtgaatgattaacacttaatttt 42246170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 14312784 - 14312900
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||| ||| |||||||||| |  || |||||||||||||||||||  | |||||||||||||||  ||| |||||||||||     
T  14312784 tttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtcccttatgtcttttgtcattacctcttttggtcc 14312883  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  14312884 tatccgttacattttaa 14312900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 9119813 - 9119927
Alignment:
Q  92 tggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtcata 190  Q
    |||||||||||||||||||  ||| ||| ||||||  | ||||||||||||||||||||||  ||| ||||||||||||| |||| ||||||||||| ||    
T  9119813 tggtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtccgttatgtcttttgtcgttacctcttttggtccta 9119912  T
Q  191 tctgttacattttaa 205  Q
    ||  |||||||||||    
T  9119913 tcctttacattttaa 9119927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 2238097 - 2237987
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||   |||||||||||||||||||||||  | ||||||||||| ||| ||||     
T  2238097 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttac 2237998  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  2237997 ctcttttggtc 2237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 20953285 - 20953359
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||| ||| ||||||||||||||||||||||||    
T  20953285 cttaatacatgctttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaattt 20953359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 1873973 - 1873848
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||| |||||||||||||||| | || ||||||||||    |||||||||||||||||||||| || ||||||||||||||  ||||     
T  1873973 cttaatacatgctttgatcccttaacttattttcaaattttattttggtcccctaactataaagtgtctcaatttgatcccttatgtcttttgccgttac 1873874  T
Q  177 ctcttttggtcatatctgttacattt 202  Q
    || ||||||||  ||| |||||||||    
T  1873873 cttttttggtcccatccgttacattt 1873848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 2236810 - 2236938
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||| ||||     
T  2236810 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttac 2236909  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||| || | || ||||||||||||    
T  2236910 ctcttttgatcctctccgttacattttaa 2236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 9123518 - 9123390
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt-aatccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| ||||||||||    |||||||||||||| |||||||  | | ||||||||||||| ||||     
T  9123518 cttaatacatgctttggtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttggaccgttatgtcttttgtcgttac 9123419  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||| ||| |||  ||||||||||||    
T  9123418 ctctttttgtcctattcgttacattttaa 9123390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 26056268 - 26056192
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| |||||||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  26056268 gacttaatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaattt 26056192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 35683052 - 35683180
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||  ||||     
T  35683052 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttac 35683151  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| | || ||||||||||||    
T  35683152 ctcttttggtcctctccgttacattttaa 35683180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 1873086 - 1873145
Alignment:
Q  300 aaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||    
T  1873086 aaaaccgttgaatcatgtaggtttattgtagcctacggtaaatgattaacacctgatttt 1873145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 1873816 - 1873762
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  1873816 cgttgaatcatgtaggtttattgttgcctacggtgaatgattaacacctgatttt 1873762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 293 - 359
Target Start/End: Original strand, 2236956 - 2237021
Alignment:
Q  293 caaatagaaaatcgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2236956 caaatagaaact-gttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 2237021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 48934395 - 48934449
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  48934395 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 48934449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 34531661 - 34531770
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaac 177  Q
    |||||| || ||||||||||||||||||||||  ||| | ||||||||  | |||||||||| |||||||||||  || |||||||||| ||| |||| |    
T  34531661 ttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctgtcgttatc 34531760  T
Q  178 tcttttggtc 187  Q
    ||||||||||    
T  34531761 tcttttggtc 34531770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 50679939 - 50679866
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || ||||||||||||||||||||||||| | ||||||||||    ||||||||||||||||||||||    
T  50679939 ttaatacatgctttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaattt 50679866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 1061571 - 1061443
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||| || |||||||||||||| ||| | ||||| ||    |||||||||||||||| |||||  || |||||||||||||  ||||     
T  1061571 cttaatacatgctttgctctcttaacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtcacttatgtcttttgccgttac 1061472  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  1061471 ctcttttggtcctatccgttacattttaa 1061443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 9119962 - 9120010
Alignment:
Q  311 atcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  9119962 atcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 9120010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 34532821 - 34532693
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||| ||||||||||||   || ||||||||||    ||||||||||||||||||||||  ||| ||||||||||||  ||||     
T  34532821 cttaatacatgctttggtcctttaacttattttcgaattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttac 34532722  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||||   |||| ||||||||||||    
T  34532721 ctcttttgggtctatccgttacattttaa 34532693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 184
Target Start/End: Original strand, 1061325 - 1061432
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || |||||||| ||||||||||||| |||| ||||||||||     |||||||||||||||||||||  | |||||||| |||||| ||||     
T  1061325 cttaatacatgctttggtcgcttaacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtcccttatgttttttgtcgttac 1061424  T
Q  177 ctcttttg 184  Q
    ||||||||    
T  1061425 ctcttttg 1061432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 42244513 - 42244580
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    |||||||||||||||||||||| ||| | ||||||||  |||||||||||| ||||||||||| ||||    
T  42244513 tttggtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatttgatcc 42244580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 48934255 - 48934366
Alignment:
Q  95 tcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtcatatct 193  Q
    ||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| |||||||| |||  |||| ||||||||||| ||||     
T  48934255 tcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtctattgacgttacctcttttggtcctatcc 48934354  T
Q  194 gttacattttaa 205  Q
    ||||||||||||    
T  48934355 gttacattttaa 48934366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 166
Target Start/End: Original strand, 52741483 - 52741574
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtctt 166  Q
    ||||||||| ||  |||||||||||||||||||||| | | ||||||||||  | ||||||||||||||||||| || || |||||||||||    
T  52741483 gacttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtctt 52741574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 48935229 - 48935117
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || |||| |||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  | ||||||||||| ||  ||||     
T  48935229 cttaatatatgctttcgtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttac 48935130  T
Q  177 ctcttttggtcat 189  Q
    |||||||||||||    
T  48935129 ctcttttggtcat 48935117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 48973195 - 48973303
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||| ||||||||||||||  ||| | ||||| ||    |||||||||||||||||||||| || ||||||||||| ||| ||||     
T  48973195 cttaatacatgctttggttccttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcgttac 48973294  T
Q  177 ctcttttgg 185  Q
    |||||||||    
T  48973295 ctcttttgg 48973303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 48974377 - 48974330
Alignment:
Q  311 atcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  48974377 atcatgtaggtgtattgtagtctacggtg-atgattaacacctaatttt 48974330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 169
Target Start/End: Complemental strand, 48974525 - 48974433
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttg 169  Q
    ||||||| || ||||||||||||||||||||||  ||| | |||||||||   ||||||||||||||||||| ||  | ||||||||||||||    
T  48974525 cttaatacatgctttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtcccttatgtcttttg 48974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 3978053 - 3978120
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    ||||||||||||||||||||||  || | ||||||||  | |||||||||||||||||||||| ||||    
T  3978053 tttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcc 3978120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 359
Target Start/End: Original strand, 35683210 - 35683253
Alignment:
Q  316 gtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    
T  35683210 gtaggtttattgtagcctacggtgaatgattaacacctgatttt 35683253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 3979420 - 3979358
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| ||| | ||||||||    ||||||||||||||||||||||    
T  3979420 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaattt 3979358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 14390255 - 14390329
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || | ||||||||  | |||||||||| |||||||||||    
T  14390255 cttaatacatgctttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaattt 14390329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 33941314 - 33941388
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || ||||||||||  | ||| |||||| |||||||||||    
T  33941314 cttaatacatgctttggtcccttaacttatttttgaattttattttggtcctttaattataaaatgtctcaattt 33941388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 35684321 - 35684212
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||| ||||||||||||  ||| ||||||||||    |||||||||| |||||||||||  | ||||||||||| ||| ||||     
T  35684321 cttaatacatgctttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttac 35684223  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  35684222 ctcttttggtc 35684212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 1872946 - 1873062
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||||||||| |||||||  ||| | |||||||| |  ||| || ||||||||| |||||  ||| ||||||||||||  |||| |||||||||||     
T  1872946 tttggtcccttaatttattttcggatttcattttggtctcctaattaaaaagtgtcttaatttggtcccttatgtcttttgccgttacctcttttggtcc 1873045  T
Q  189 tatctgttacattttaa 205  Q
     |||||||| |||||||    
T  1873046 catctgttatattttaa 1873062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 33850299 - 33850347
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  33850299 cttaatacatgctttggtcccttaacttatttttggattttattttggt 33850347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 33943679 - 33943631
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||    
T  33943679 cttaatacatgctttggtcccttaacttatttttggattttattttggt 33943631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 9123354 - 9123307
Alignment:
Q  312 tcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||||||||||| ||| ||||||||||||||| || |||||    
T  9123354 tcatgtaggtttattgtagcctatggtgaatgattaacatctgatttt 9123307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 51424259 - 51424322
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||||||||||||||||| ||| | ||||||||    ||| ||||||||||||||||||    
T  51424259 ctttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaattt 51424322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 13568552 - 13568518
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttg 124  Q
    |||||||||||||||||||||||||| ||||||||    
T  13568552 tttggtcccttaacttatttttagattttattttg 13568518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 13930782 - 13930720
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | | | | ||||||  | ||||||||||||||||||||||    
T  13930782 tttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaattt 13930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 223
Target Start/End: Original strand, 14169632 - 14169762
Alignment:
Q  94 gtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcct-tatgtcttttgttgttaactcttttggtcatatc 192  Q
    |||||||||||||||||    ||| | ||||||  | |||||||||| |||||||||||  |||  ||  |||||||| ||| ||| |||||||| ||||    
T  14169632 gtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtcttatc 14169731  T
Q  193 tgttacattttaatcataaatgtctaaggtg 223  Q
    |||||  |||||| | |||||||||||||||    
T  14169732 tgttagtttttaaccttaaatgtctaaggtg 14169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 32823455 - 32823529
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||| || |||||||||||||||||||||||  || ||||||||||    ||||| |||| |||||||||||    
T  32823455 cttaatatatgctttggtcccttaacttatttttgaattttattttggtcccttaactttaaactgtctcaattt 32823529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 40135440 - 40135382
Alignment:
Q  94 gtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | ||||||||  | ||||| |||| |||||||||||    
T  40135440 gtcccttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattt 40135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 42248412 - 42248350
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||| | ||||||||||| ||| | ||||||||   |||||||||||||||||||||||    
T  42248412 tttggtccttcaacttatttttggatttcattttggtcccataactataaagtgtctcaattt 42248350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 49139810 - 49139872
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||||| | | |  |||||||   |||||||||||||||||||||||    
T  49139810 tttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaattt 49139872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 1898002 - 1898075
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| || |||||||||||||||||||||||  || ||| |||||||   ||||| |||| |||||||||||    
T  1898002 ttaatacatgctttggtcccttaacttatttttgaattttaatttggttccctaactttaaattgtctcaattt 1898075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 9633773 - 9633846
Alignment:
Q  79 ttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||| ||| |||||||| ||||||||||||| | | | ||||||||    ||||||||||||||||||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaattt 9633846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 157
Target Start/End: Original strand, 39193576 - 39193657
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    ||||||||| ||  ||||||||||||||||||||||  || ||||||||||    ||||| |||| ||||||||||| ||||    
T  39193576 gacttaatacatgatttggtcccttaacttattttttaattttattttggtcccttaactttaaactgtctcaatttgatcc 39193657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 29001241 - 29001193
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggt 126  Q
    ||||||| || ||||||||||||||||||||||| ||| | ||||||||    
T  29001241 cttaatacatgctttggtcccttaacttatttttggatttcattttggt 29001193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 34532658 - 34532610
Alignment:
Q  311 atcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||||||||| |||||||| ||| ||||| |||||||||||| |||||    
T  34532658 atcatgtaggtgtattgtagcctatggtgagtgattaacacctgatttt 34532610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 13173034 - 13173161
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| ||||||||||    ||||||||||||||||||||||  || ||||||| |||| ||||||     
T  13173034 cttaatacatgctttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctcttatgt-tttttttgttac 13173132  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  13173133 ctcttttggtcgtatccgttacattttaa 13173161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 19367714 - 19367842
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || |||| |||||||||||||||||   || | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||||||||     
T  19367714 cttaatacatgctttcgtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgttac 19367813  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    || ||||||||||||| ||||||||||||    
T  19367814 cttttttggtcatatccgttacattttaa 19367842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 26584144 - 26584028
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||  ||| ||||||||||    ||||||||||||||||||||||  | ||||||||||||||  |||| |||||||||||     
T  26584144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggttccttatgtcttttgccgttacctcttttggtcg 26584045  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  26584044 tatccgttacattttaa 26584028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 2138744 - 2138636
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    ||||||||||||| |||||||| ||| ||||||||||    ||||||||||||||||||||||| | ||||||||||| ||| |||| |||||||||||     
T  2138744 tttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtcc 2138645  T
Q  189 tatctgtta 197  Q
    | |||||||    
T  2138644 tctctgtta 2138636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 8447218 - 8447346
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || |||| |||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||  ||||     
T  8447218 cttaatatatgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttac 8447317  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  8447318 ctcttttggtcctatccgttacattttaa 8447346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 8456022 - 8456150
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || |||| |||||||||||||||||  ||| | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||  ||||     
T  8456022 cttaatatatgctttagtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttac 8456121  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  8456122 ctcttttggtcctatccgttacattttaa 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 26581962 - 26582077
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtca 188  Q
    |||||||||||||||||||||| ||| ||||||||||    ||||||||||||| ||||||||  | |||||| |||||||| ||| ||||||||||||     
T  26581962 tttggtcccttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcgtt-actcttttggtcc 26582060  T
Q  189 tatctgttacattttaa 205  Q
    |||| ||||||||||||    
T  26582061 tatccgttacattttaa 26582077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 28225419 - 28225550
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgtt 174  Q
    ||||||||| || ||||||||||||||||||||||   || | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||| |||    
T  28225419 gacttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgtt 28225518  T
Q  175 aactcttttggtcatatctgttacattttaat 206  Q
    |  ||||||||||  ||| ||| |||||||||    
T  28225519 atatcttttggtcccatccgttgcattttaat 28225550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 19368637 - 19368531
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||  | ||||||||||||||||||||||  || |||||||||| ||| ||||     
T  19368637 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgttac 19368538  T
Q  177 ctctttt 183  Q
    |||||||    
T  19368537 ctctttt 19368531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 26583999 - 26583945
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  26583999 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 26583945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 28226380 - 28226326
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  28226380 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 28226326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 27438799 - 27438866
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    |||||||||||||||||||||| ||| | ||||||||  | |||||||||||||||||||||| ||||    
T  27438799 tttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcc 27438866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 28225576 - 28225630
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||| |||||    
T  28225576 cgttggatcatgtaggtttattgtagccaacggtgaatgattaacacctgatttt 28225630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 28226526 - 28226409
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtc 187  Q
    ||||| ||| ||||||||||||  ||| | ||||||||    |||||||||||||||||||||| || ||| ||||||||||  |||| |||||||||||    
T  28226526 ctttgatccgttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccctaatgtcttttgccgttacctcttttggtc 28226427  T
Q  188 atatctgttacattttaa 205  Q
      ||| ||||||||||||    
T  28226426 ccatccgttacattttaa 28226409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 13176440 - 13176324
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcctt-atgtcttttgttgttaactcttttggtca 188  Q
    ||||||||||||| | |||||  ||| ||||||| ||    |||||||||| |||||||||||  || || ||||||||||| |||| ||||||||||||    
T  13176440 tttggtcccttaattcattttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttatgtcttttgtcgttacctcttttggtca 13176341  T
Q  189 tatctgttacattttaa 205  Q
    ||||  |||||||||||    
T  13176340 tatcccttacattttaa 13176324  T

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Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 8447375 - 8447429
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||||| |||||||| ||| |||||||||||||||||| |||||    
T  8447375 cgttggatcatgtaggtgtattgtagcctatggtgaatgattaacacctgatttt 8447429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 8456179 - 8456233
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||||| |||||||| ||| |||||||||||||||||| |||||    
T  8456179 cgttggatcatgtaggtgtattgtagcctatggtgaatgattaacacctgatttt 8456233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 26582106 - 26582160
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||| ||| |||||||||| ||||| |||||||||||||||| |||||    
T  26582106 cgttggatcatatagctttattgtagcctacgatgaatgattaacacctgatttt 26582160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 9927617 - 9927677
Alignment:
Q  92 tggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    |||||||||||||||||||| | | ||| ||||||    ||||||||||||||||||||||    
T  9927617 tggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaattt 9927677  T

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Target: scaffold0155 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 5166 - 5294
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatc-cttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||| ||| || |||||||    ||||||||||||||||||||||  ||  | ||||||||||  ||||     
T  5166 cttaatacatgctttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtctataatgtcttttgccgttac 5265  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    ||||||||||| |||| ||||||||||||    
T  5266 ctcttttggtcctatccgttacattttaa 5294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 5323 - 5377
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  5323 cgttggatcatgtaggtgtattgtagcctacggtgaatgattaacacctgatttt 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 1177 - 1050
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgttaa 176  Q
    ||||||| || ||||| ||| ||||||||||||  ||| |||||| |||  | ||||||||||||||||||||||  ||| ||||||||||| ||||||     
T  1177 cttaatacatgctttgatccgttaacttattttcggattttattt-ggtcctctaactataaagtgtctcaatttggtcccttatgtcttttattgttac 1079  T
Q  177 ctcttttggtcatatctgttacattttaa 205  Q
    |||||||| || |||| ||||||||||||    
T  1078 ctcttttgctcctatccgttacattttaa 1050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 1022 - 968
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  1022 cgttggatcatgtaggtttattgcagcctacggtgaatgattaacacctaatttt 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 206
Target Start/End: Original strand, 25917 - 26048
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc-ttatgtcttttgttgtt 174  Q
    ||||||||| || ||||||||||||||||||||||   || | ||||||||    ||||||||||||||||||||||  ||| ||||||||||||| |||    
T  25917 gacttaatacatgctttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgtt 26016  T
Q  175 aactcttttggtcatatctgttacattttaat 206  Q
    |  ||||||||||  ||| ||| |||||||||    
T  26017 atatcttttggtcccatccgttgcattttaat 26048  T

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Target: scaffold0038; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 359
Target Start/End: Complemental strand, 26878 - 26824
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  26878 cgttggatcatgtaggtttattgtagcctacggtgaatgattaacacctgatttt 26824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 26074 - 26128
Alignment:
Q  305 cgttgaatcatgtaggtttattgtagtctacggtgaatgattaacacctaatttt 359  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||| |||||    
T  26074 cgttggatcatgtaggtttattgtagccaacggtgaatgattaacacctgatttt 26128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 89 - 205
Target Start/End: Complemental strand, 27024 - 26907
Alignment:
Q  89 ctttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaactcttttggtc 187  Q
    ||||| ||| ||||||||||||  ||| | ||||||||    |||||||||||||||||||||| || ||| ||||||||||  |||| |||||||||||    
T  27024 ctttgatccgttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttgatccctaatgtcttttgccgttacctcttttggtc 26925  T
Q  188 atatctgttacattttaa 205  Q
      ||| ||||||||||||    
T  26924 ccatccgttacattttaa 26907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 48563 - 48496
Alignment:
Q  90 tttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaatcc 157  Q
    |||||||||||||||||||||| ||| | ||||||||  | |||||||||||||||||||||| ||||    
T  48563 tttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcc 48496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 187
Target Start/End: Original strand, 1752 - 1862
Alignment:
Q  78 cttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaatttaat-ccttatgtcttttgttgttaa 176  Q
    ||||||| || ||||||||||||||||||||||  ||| | ||||||||    ||| ||||||||||||||||||  | ||||||||||| ||| ||||     
T  1752 cttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttac 1851  T
Q  177 ctcttttggtc 187  Q
    |||||||||||    
T  1852 ctcttttggtc 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 4027 - 3993
Alignment:
Q  78 cttaatagatactttggtcccttaacttattttta 112  Q
    ||||||| |||||||||||||||||||||||||||    
T  4027 cttaatacatactttggtcccttaacttattttta 3993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 56821 - 56745
Alignment:
Q  76 gacttaatagatactttggtcccttaacttatttttagatcttattttggttttataactataaagtgtctcaattt 152  Q
    ||||||||| ||  |||||||||||||||||||||| ||| | | ||||||    ||| ||||||||||||||||||    
T  56821 gacttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaattt 56745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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