View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6289_high_27 (Length: 238)
Name: NF6289_high_27
Description: NF6289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6289_high_27 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11402609 - 11402388
Alignment:
| Q |
1 |
ttttgatctaaattttctgcaatctgtgcatgatgtttatatcttcaatcgtctgctttgcgctcaaacttttcgcggtgaaaacataatttctcctctc |
100 |
Q |
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| T |
11402609 |
ttttgatataaattttttgcaatctgtgcatgatgtttatatcttcaatcgtctgctttgcgctcaaacttttcgcggtgaaaacataatttctcctctc |
11402510 |
T |
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| Q |
101 |
ttggttgtaataacttcttcctttgccatatatagttgatagaaccaaaattgtttccaccttttggattgaaattgttctctcttttgatcgaagtttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11402509 |
ttggttgtaataacttcttcctttgccatatataattgatagaaccaaaattgtttccaccttttggattgaaattgttctctcttttgatcgaagtttt |
11402410 |
T |
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| Q |
201 |
catgtcctctcccatttgattg |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
11402409 |
catgtcctctcccatttgattg |
11402388 |
T |
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