View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6289_high_4 (Length: 452)
Name: NF6289_high_4
Description: NF6289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6289_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 382; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 11 - 407
Target Start/End: Original strand, 34608582 - 34608981
Alignment:
| Q |
11 |
cacagatgatactcgatttacgaacattacatatgaaagcaacataaacgtacaaaatttgtttccatgaacggaccacataaataaatattcagaaata |
110 |
Q |
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| T |
34608582 |
cacagatgatactcgatttacgaacattacatatgaaagcaacataaacgtacaaaatttgtttccatgaacggaccacataaataaatattcagaaata |
34608681 |
T |
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| Q |
111 |
aaaatatctgaacattattacctcacactctctctgttcatagccagaaacgtctctcttatatttcttgtcttcttcagtgtcaatttccactactttt |
210 |
Q |
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| T |
34608682 |
aaaatatctgaacattattacctcacactctctctgttcatagccagaaacgtctctcttatatttcttgtcttcttcagtgtcaatttccactactttt |
34608781 |
T |
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| Q |
211 |
tcttcaaaatatcacccaacaacacttcattcatttctttcttcaat---atcatatcttctacttgaagcaaaggtaacttcaacctttctttctcttt |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34608782 |
tcttcaaaatatcacccaacaacacttcattcatttctttcttcaatatcatcatatcttctacttgaagcaaaggtaacttcaacctttctttctcttt |
34608881 |
T |
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| Q |
308 |
gtggatcaatttcatccacccattttctctttcaaatcaactttacttcaattctgctaaatgggtttgtgctattcaatttaatatttcaaaaagctca |
407 |
Q |
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| T |
34608882 |
gtggatcaatttcatccacccattttttctttcaaatcaactttacttcaattctgctaaatgggtttgtgctattcaatttaatatttcaaaaagctca |
34608981 |
T |
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